mRNA_L-elsbetiae_contig114.1224.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig114.1224.1 vs. uniprot
Match: D7G3P2_ECTSI (Similar to ankyrin 3, epithelial isoform e isoform 19 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P2_ECTSI) HSP 1 Score: 150 bits (378), Expect = 1.100e-36 Identity = 95/203 (46.80%), Postives = 124/203 (61.08%), Query Frame = 1 Query: 19 EMIIVLLRHGANVNAVRASDGNTPLHVAAEVASTSNVEALLTAGGDETATNDEAEIPLDVVG-QGDFSGFLS----SRWAAIRSLLANARRDRADRAWSRRGFFVLCRVFPGRMRLQLAFSED-----AGDHKAPRPASSPRDGFLISRAKKKRVGSAEDGGRGKEHAKNVHAEESATAFRAAMSRLMGLEADVIFRTIVGFL 597 +M++ LL GA+VN ASDGNTPLH+AAE + V+ LL AG DETA N + + PLDV+G + D L AIR+LL NA +DRA+RAWSRRGFFVLCR FP R++ QL S D + + + D SR KRV +AE+ +E H EE ATAFRAAM RL+GL+ +V+FRT++ F+ Sbjct: 325 DMLLALLGRGAHVNTKGASDGNTPLHLAAEKSFRVKVDVLLQAGADETAVNHKGQTPLDVIGLKTDTMRTLMFGDHREEDAIRTLLVNAPKDRANRAWSRRGFFVLCRAFPERVQQQLVLSGDDRVNVVCSNVCSQASCGNDDDRSDSRNNAKRVATAEEKEGVEERPSAAHVEEGATAFRAAMGRLIGLQVEVVFRTVLEFV 527
BLAST of mRNA_L-elsbetiae_contig114.1224.1 vs. uniprot
Match: D7G0W2_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W2_ECTSI) HSP 1 Score: 111 bits (278), Expect = 1.810e-24 Identity = 82/203 (40.39%), Postives = 110/203 (54.19%), Query Frame = 1 Query: 13 SSEMIIVLLRHGANVNAVRASDGNTPLHVAAEVASTSN----VEALLTAGGDETATNDEAEIPLDV----VGQGDFSGFLSSRWAAIRSLLANARRDRADRAWSRRGFFVLCRVFPGRMRLQLAFSEDAGDHKAPRPASSPRDGFLISRAKKKRVGSAEDGGRGKEHAKNVHAEESATAFRAAMSRLMGLEADVIFRTIVGFL 597 ++ +I L RHGA+V+A GNTPLHVAA+ +T + V+ALL AG DET + + + PLDV + GD G + RS+L NA +DRA RAWSRR FFV+CR P R+RL + +D +SPR AKK +A G G+ A +SA F+ AM L+ L+ D +FR IV FL Sbjct: 96 NAAVIEALARHGADVHAQETPSGNTPLHVAAQNCTTESSWETVDALLKAGADETRLDCQGQTPLDVLEARIAAGDLMGASVNEAERTRSVLVNAPKDRAQRAWSRRSFFVMCRAHPDRVRLTVV--DDT--------TTSPR-------AKKTMAAAATAVGSGRRGANR----DSADNFQRAMRSLIRLKEDGLFRKIVAFL 277
BLAST of mRNA_L-elsbetiae_contig114.1224.1 vs. uniprot
Match: A0A6H5L850_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L850_9PHAE) HSP 1 Score: 100 bits (250), Expect = 9.220e-20 Identity = 78/205 (38.05%), Postives = 111/205 (54.15%), Query Frame = 1 Query: 1 AEPYSSEMIIVLLRHGANVNAVRASDGNTPLHVAAEVASTSNVEALLTAGGDETATNDEAEIPLDVVGQGDFSG----FLSSRWA-AIRSLLANARRD-RADRAWSRRGFFVLCRVFPGRMRLQLAFSEDAGDHKAPRPASSPRDGFLISRAKKKRVGSAEDGGRGKEHAKNVHAEESATAFRAAMSRLMGLEADVIFRTIVGFL 597 AE +S+ M+I +L HGA+VN ASDGNTPLH+AAE + V+ LL AG ETA N + PLDV+G + F + R AIR+LL NA ++ R +R + ++F +D P D +R+ KRV +A++ G + + EE ATAFRAAM RL+GLE +V+FRT++ F+ Sbjct: 236 AEKWSNHMLIAMLGHGAHVNTKGASDGNTPLHLAAEKSFRVKVDVLLQAGAHETAVNHNGQTPLDVIGLNTDTMRTLVFGNHREEDAIRTLLVNAPKEGRIERGL-----------------VGVSFGKD----------DEPSD----NRSNAKRVATAKETGGVEGPPSDAPVEEGATAFRAAMGRLIGLEVEVVFRTVLEFV 409
BLAST of mRNA_L-elsbetiae_contig114.1224.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 4.400e-13 Identity = 74/203 (36.45%), Postives = 102/203 (50.25%), Query Frame = 1 Query: 13 SSEMIIVLLRHGANVNAVRASDGNTPLHVAAEVASTSNVEALLTAGGDETATNDEAEIPLDVVG---QGDFSGF-LSSRWAAIRSLLANARRDRADRAWSRRGFFVLCRVFPGRMRLQLAFSEDAGDHKAPRPASSPRDGFLISR----AKKKRVGSAEDGGRGKEHAKNVHAEESATAFRAAMSRLMGLEADVIFRTIVGFL 597 S + + LL GAN NA TPLHVA ++ + VE LL G DET +ND ++P DV+G +GD + + + IR +LA A ADR+W RRG+ VL R P R+Q+A G ++R AK RV S ED G +E A+N + + + L+GLEAD +FR +VGFL Sbjct: 330 SIDTTLALLEGGANTNA-HGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAP---ADRSWRRRGWLVLSRSCP--TRVQIA-----------------NKGSRVNRNSCPAKVARV-SGEDLGGDEEEAEN----QMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
BLAST of mRNA_L-elsbetiae_contig114.1224.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 2.700e-12 Identity = 68/199 (34.17%), Postives = 99/199 (49.75%), Query Frame = 1 Query: 13 SSEMIIVLLRHGANVNAVRASDGNTPLHVAAEVASTSNVEALLTAGGDETATNDEAEIPLDVVGQ----GDFSGFLSSRWAAIRSLLANARRDRADRAWSRRGFFVLCRVFPGRMRLQLAFSEDAGDHKAPRPASSPRDGFLISRAKKKRVGSAEDGGRGKEHAKNVHAEESATAFRAAMSRLMGLEADVIFRTIVGFL 597 S+ I LL GA+VN VR + TPLH A +S + VE LL G DE T+D P D++G G G + + I +LA A ADR+W RR + VL R P R+++ +E+ +SS + ++R S ED G G+ ++ + R ++RL+GLEAD +FR +VGFL Sbjct: 332 STGTIRALLEGGADVN-VRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADGQRIHQMLARAP---ADRSWRRRSWLVLSRSCPTRVKIA---NENRSGSSVGSSSSSNGNSTKLARF------SGEDSGGGERETED----QMMVDLRGLVTRLVGLEADGLFRLVVGFL 513
BLAST of mRNA_L-elsbetiae_contig114.1224.1 vs. uniprot
Match: A0A6H5KHT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHT9_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 4.200e-12 Identity = 61/161 (37.89%), Postives = 79/161 (49.07%), Query Frame = 1 Query: 127 VEALLTAGGDETATNDEAEIPLDV----VGQGDFSGFLSSRWAAIRSLLANARRDRADRAWSRRGFFVLCRVFPGRMRLQLAFSEDAGDHKAPRPASSPRDGFLISRAKKKRVGSAEDGGRGKEHAKNVHAEESATAFRAAMSRLMGLEADVIFRTIVGFL 597 V+ALL AG DET + + + PLDV + GD G ++ RS+L NA +DRA RAWSRR FFV+CR P R RL + DG S + KK A G G + + + A F+ AM LM L+ D +FR IV FL Sbjct: 345 VDALLKAGADETRLDCQGQTPLDVLEARIAVGDVVGANAAEHT--RSMLVNAPKDRAQRAWSRRSFFVMCRAHPNRARLTVV------------------DGTTTSPSAKKLATEATAVGSGW---RGTNWDSRADIFQRAMRSLMLLKEDGLFRKIVAFL 482
BLAST of mRNA_L-elsbetiae_contig114.1224.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 77.0 bits (188), Expect = 1.430e-11 Identity = 67/198 (33.84%), Postives = 89/198 (44.95%), Query Frame = 1 Query: 13 SSEMIIVLLRHGANVNAVRASDGNTPLHVAAEVASTSNVEALLTAGGDETATNDEAEIPLDVVG---QGDFSGFLSSRWAAIRSLLANARRDRADRAWSRRGFFVLCRVFPGRMRLQLAFSEDAGDHKAPRPASSPRDGFLISRAKKKRVGSAEDGGRGKEHAKNVHAEESATAFRAAMSRLMGLEADVIFRTIVGFL 597 S+ I LL GAN+NA A D +TPLH+A S VE LL G DE N++ + P DVVG Q D R A + + R ADR+W RRG+ VL R P R+ + S + ISR A G+G ++ R + RL+GLEA+ +FR +VGFL Sbjct: 333 STGTICALLEGGANINARTAGD-DTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDD--EEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSS----------------ISRINGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
BLAST of mRNA_L-elsbetiae_contig114.1224.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE) HSP 1 Score: 65.9 bits (159), Expect = 1.800e-8 Identity = 73/207 (35.27%), Postives = 96/207 (46.38%), Query Frame = 1 Query: 25 IIVLLRHGANVNAVRASDGNTPLHVAAEVASTSNVEALLTAGGDETATN------------DEAEIPLDVV-GQGDFSG---FLSSRWAAIRSLLANARRDRADRAWSRRGFFVLCRVFPGRMRLQLAFSEDAGDHKAPRPASSPRDGFLISRAKKKRVGSAEDGGRGKEHAKNVHAEESATAFRAAMSRLMGLEADVIFRTIVGFL 597 I LL GANVNA D TPLHVA +S + VE LL G DE T+ E E P DV G+ G + + IR +LA A ADR+W RR + VL R P ++++ S SS G +S A+ V + GG KE ++ +R + RL+GLEADV+FR +VGFL Sbjct: 79 IRALLEGGANVNARDVFD-QTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPAGAIVDSEEETPPDVTDAPGENRGKDEAIEADQHRIRQMLARAP---ADRSWHRRRWLVLSRSCPTKVQISNTSSSSN--------ISSGSSGDGLS-AEMVSVNCKDLGGDDKETE-----DQKTVNWRDLVVRLVGLEADVLFRLVVGFL 267
BLAST of mRNA_L-elsbetiae_contig114.1224.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 4.030e-8 Identity = 69/199 (34.67%), Postives = 90/199 (45.23%), Query Frame = 1 Query: 13 SSEMIIVLLRHGANVNAVRASDGNTPLHVAAEVASTSNVEALLTAGGDETATNDEAEIPLDVVG---QGDFSGF-LSSRWAAIRSLLANARRDRADRAWSRRGFFVLCRVFPGRMRLQLAFSEDAGDHKAPRPASSPRDGFLISRAKKKRVGSAEDGGRGKEHAKNVHAEESATAFRAAMSRLMGLEADVIFRTIVGFL 597 S I LL GAN+NA R TPLHVA +S VE LL G D+ T + + P VV Q D L + IR +LA RD A R+W RRG+ VL R P R+++ S + + AK +V S E R E A++ R + RL+ LEAD +FR +VGFL Sbjct: 294 SDGTIRALLEGGANINA-RIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEELEADNQRIRRMLA---RDPAARSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXNG-------NSAKVAKV-SGESSSRDDEET----ADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476
BLAST of mRNA_L-elsbetiae_contig114.1224.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI) HSP 1 Score: 63.5 bits (153), Expect = 2.610e-7 Identity = 60/166 (36.14%), Postives = 76/166 (45.78%), Query Frame = 1 Query: 127 VEALLTAGGDETATNDEAEIPLDVVGQ----GDFSGFLSSRWAAIRSLLANARRDRADRAWSRRGFFVLCRVFPGRMRLQLAFSEDAGDHKAPRPASSPRDGFLISRAKKKRVGSA-----EDGGRGKEHAKNVHAEESATAFRAAMSRLMGLEADVIFRTIVGFL 597 V+ LL G DET + + P D VG GD L + LLANA ADRAW RRG VLCR + R RL+ ED GD R S R A+ VG+ +GG G E +R+A R++ LE + IFR++VGFL Sbjct: 281 VDLLLRRGADETTPDRNGQQPADRVGHCMELGDV--LLGHEVVLVHELLANAP---ADRAWRRRGLLVLCRAWLRRSRLR---QEDGGD---TRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDE-------------WRSASKRVVELEEEGIFRSVVGFL 422 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig114.1224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig114.1224.1 >prot_L-elsbetiae_contig114.1224.1 ID=prot_L-elsbetiae_contig114.1224.1|Name=mRNA_L-elsbetiae_contig114.1224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=193bp MIIVLLRHGANVNAVRASDGNTPLHVAAEVASTSNVEALLTAGGDETATNback to top mRNA from alignment at L-elsbetiae_contig114:8607..11175- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig114.1224.1 ID=mRNA_L-elsbetiae_contig114.1224.1|Name=mRNA_L-elsbetiae_contig114.1224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2569bp|location=Sequence derived from alignment at L-elsbetiae_contig114:8607..11175- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig114:8607..11175- >mRNA_L-elsbetiae_contig114.1224.1 ID=mRNA_L-elsbetiae_contig114.1224.1|Name=mRNA_L-elsbetiae_contig114.1224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1158bp|location=Sequence derived from alignment at L-elsbetiae_contig114:8607..11175- (Laminarionema elsbetiae ELsaHSoW15)back to top |