mRNA_L-elsbetiae_contig11210.1094.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11210.1094.1 vs. uniprot
Match: A0A6H5JRY5_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRY5_9PHAE) HSP 1 Score: 353 bits (906), Expect = 2.160e-115 Identity = 185/280 (66.07%), Postives = 224/280 (80.00%), Query Frame = 1 Query: 1 DDLRRSLVPPGTRSSSSNDVSAG---SNGDEGSSDAP----------ALEEEYLKNMARRNLAITITCTSCMLMLYGYDFGITAWSVLMIKVRGAEGVSDIYAYLAARGEALGFLVACAPFGGFVEGVIGSKVSSSKG-RKAEIQLANILCILGASLEGFAGLRNWNNVGYVLVFVIGRLIYGLGLGLSLRCGPMYLRETVTGPFKNAATVSVKLAMVIGTIVSYVAGGLLT-NPTIGYFGVWILAGTSLACLQVLPESPMFMLLHEERFPRAQILDALK 795 DD+R+SLV GT SS N +S G D GS+ P ++ +EY++ +A RNL IT+TCTSC+LMLYGYDFGITAWSVLMIK +GAE VSDIY YL+ GEALG LVACAP GGF+EG+IG+K++S +G RKAEI+L N+LCI GA+LEG AG+ W+N+ VL+F GRLI+GLGLGLSLRCGPMYLRETV PF+NAATVSVKL+MV+G I+SYV GG+L+ NPTI YFGVWILAGTSLACLQ++PESPM+MLLHEE+F R QILDAL+ Sbjct: 6 DDMRQSLVA-GTTQSSDN-ISNGLVRRASDSGSTGVPGGGAGFVVPASMGKEYMRKLATRNLVITLTCTSCLLMLYGYDFGITAWSVLMIKTKGAEDVSDIYTYLSTHGEALGILVACAPIGGFIEGLIGTKIASKRGGRKAEIRLVNLLCIFGATLEGMAGMTTWDNLNVVLLFAFGRLIFGLGLGLSLRCGPMYLRETVREPFRNAATVSVKLSMVVGVIISYVLGGVLSGNPTIAYFGVWILAGTSLACLQLMPESPMYMLLHEEQFHRGQILDALR 283
BLAST of mRNA_L-elsbetiae_contig11210.1094.1 vs. uniprot
Match: UPI0010A39397 (D-xylose-proton symporter-like 2 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A39397) HSP 1 Score: 89.4 bits (220), Expect = 1.380e-16 Identity = 60/198 (30.30%), Postives = 98/198 (49.49%), Query Frame = 1 Query: 181 MLYGYDFGITAWSVLMIKVRGAEGVSDIYAYLAARGEALGFLVACAPFGGFVEGVIGSKVSSSKGRKAEIQLANILCILGASLEGFAGLRNWNNVGYVLVFVIGRLIYGLGLGLSLRCGPMYLRETVTGPFKNAATVSVKLAMVIGTIVSYVAGGLLTNPTIGY---FGVW----ILAGTSLACLQVLPESPMFMLLH 753 +LYGYD G T+ + ++I+ GVS + +G + + + +G + V+ V+ GR+ E+ +A +L +GA +E FA V VIGR +YGLG+GL++ PMY+ ET P + + +V+G + Y G LL + G+ FG+ I+ G + CL P SP ++LL Sbjct: 51 LLYGYDIGATSCATIVIESATLSGVS----WYDLSSVEIGLVTSGSLYGALIGSVLAFNVADFLGRRRELIVAALLYFVGALIEAFAP--------DFAVLVIGRFVYGLGIGLAMHAAPMYIAETAPTPIRGRLISLKEFFIVLGMVAGYGVGSLLVDTVAGWRYMFGISSPLAIIMGIGMWCL---PSSPRWILLR 233
BLAST of mRNA_L-elsbetiae_contig11210.1094.1 vs. uniprot
Match: A0A830D741_9LAMI (D-xylose-proton symporter-like 2 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830D741_9LAMI) HSP 1 Score: 88.6 bits (218), Expect = 2.590e-16 Identity = 54/197 (27.41%), Postives = 99/197 (50.25%), Query Frame = 1 Query: 181 MLYGYDFGITAWSVLMIKVRGAEGVSDIYAYLAARGEALGFLVACAPFGGFVEGVIGSKVSSSKGRKAEIQLANILCILGASLEGFAGLRNWNNVGYVLVFVIGRLIYGLGLGLSLRCGPMYLRETVTGPFKNAATVSVKLAMVIGTIVSYVAGGLLTNPTIGY-------FGVWILAGTSLACLQVLPESPMFMLL 750 +LYGYD G T+ + + I+ G+S + +G + + + +G + ++ V+ GR+ E+ L++++ ++GA + A V VIGR IYG+G+GL++ PMY+ ET + + +V+G ++ Y+AG LL + G+ F + ++ G + CL PESP ++LL Sbjct: 58 LLYGYDIGATSSATISIQSASFSGIS----WYNLSSVEVGLITSGSLYGALIGSILAFNVADFLGRRKELVLSSVMYLVGALITSLAPT--------FAVLVIGRFIYGIGIGLAMHAAPMYIAETAPSQIRGLLISLKEFFIVLGMVIGYIAGSLLVESSAGWRYMYGISFPLSLVMGFGMWCL---PESPRWILL 239
BLAST of mRNA_L-elsbetiae_contig11210.1094.1 vs. uniprot
Match: A0A328D8A4_9ASTE (MFS domain-containing protein n=2 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328D8A4_9ASTE) HSP 1 Score: 86.3 bits (212), Expect = 1.600e-15 Identity = 53/194 (27.32%), Postives = 98/194 (50.52%), Query Frame = 1 Query: 181 MLYGYDFGITAWSVLMIKVRGAEGVSDIYAYLAARGEALGFLVACAPFGGFVEGVIGSKVSSSKGRKAEIQLANILCILGASLEGFAGLRNWNNVGYVLVFVIGRLIYGLGLGLSLRCGPMYLRETVTGPFKNAATVSVKLAMVIGTIVSYVAGGLLTNPTIGY---FGVWILAGTSLAC-LQVLPESPMFMLL 750 +LYGYD G T+ + + I+ + G+S + +G + +C+ +G + ++ V+ GR+ E+ L++IL ++GA++ FA + + VIGR IYG+G+GL++ PMY+ ET + + +V G ++ Y G LL G+ +G+ + + + LP SP ++LL Sbjct: 56 LLYGYDIGATSCAAICIESATSSGIS----WYDLSSVEVGLITSCSLYGALIGSLLAFNVADFIGRRRELILSSILYLIGAAITAFAPIY--------AILVIGRFIYGVGIGLAMHAAPMYIAETSPSQIRGLLISLKEFLIVFGMLLGYTVGSLLVEVVSGWRYMYGISVPLSIFMGIGMWWLPASPRWILL 237
BLAST of mRNA_L-elsbetiae_contig11210.1094.1 vs. uniprot
Match: A0A022RTU3_ERYGU (MFS domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RTU3_ERYGU) HSP 1 Score: 85.1 bits (209), Expect = 4.020e-15 Identity = 55/196 (28.06%), Postives = 102/196 (52.04%), Query Frame = 1 Query: 181 MLYGYDFGITAWSVLMIKVRGAEGVSDIYAYLAARGEALGFLVACAPFGGFVEGVIGSKVSSSKGRKAEIQLANILCILGASLEGFAGLRNWNNVGYVLVFVIGRLIYGLGLGLSLRCGPMYLRETVTGPFKNAATVSVKLAMVIGTIVSYVAGGLLTNPTIGYFGVWILAGTSLACLQV-----LPESPMFMLLH 753 +LYGYD G T+ + L+I+ GVS + +G + + + +G + ++ V+ GR+ E+ L++++ +GA++ FA +V VIGR++YG+G+GL++ PMY+ ET + + +V+G +V YV G LL + G+ ++ L+ T ++ + LP SP ++LL Sbjct: 59 LLYGYDIGATSSATLLIQSATLSGVS----WYNLSSVQVGLITSGSLYGALIGSILAYTVADFLGRRRELGLSSVMYFVGATVTAFAPT--------FVVLVIGRVVYGIGIGLAMHAAPMYIAETAPSQIRGQLISLKEFFIVLGMLVGYVGGSLLVDTVGGWRYMYGLS-TPISLVMGFGMYWLPSSPRWILLR 241
BLAST of mRNA_L-elsbetiae_contig11210.1094.1 vs. uniprot
Match: A0A833VWR1_9POAL (D-xylose-proton symporter-like 2 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VWR1_9POAL) HSP 1 Score: 84.0 bits (206), Expect = 9.980e-15 Identity = 53/196 (27.04%), Postives = 97/196 (49.49%), Query Frame = 1 Query: 181 MLYGYDFGITAWSVLMIKVRGAEGVSDIYAYLAARGEALGFLVACAPFGGFVEGVIGSKVSSSKGRKAEIQLANILCILGASLEGFAGLRNWNNVGYVLVFVIGRLIYGLGLGLSLRCGPMYLRETVTGPFKNAATVSVKLAMVIGTIVSYVAGGLLTNPTIGYFGVWILAGTSLACLQV------LPESPMFMLL 750 +LYGYD G T+ + + ++ + G + +G +V+ + +G + + V+ GR+ E+ L+++L + GA L FA Y V V+GR IYG G+GL++ PMY+ ET + + +V+G ++ Y+ G L + T G+ ++ ++L C+ + LP SP ++LL Sbjct: 60 LLYGYDIGATSGATISLQSQSLSGTR----WYNLSSLQIGLVVSGSLYGALIGSALAFTVADFLGRRRELILSSLLYLTGALLTAFAP--------YFTVLVVGRFIYGFGIGLAMHAAPMYIAETAPSQIRGTLISLKEFFIVLGMLLGYITGSLFVDLTSGWR--YMYGASTLICVIMAIGMWWLPPSPRWLLL 241
BLAST of mRNA_L-elsbetiae_contig11210.1094.1 vs. uniprot
Match: B9S203_RICCO (Sugar transporter, putative n=2 Tax=Ricinus communis TaxID=3988 RepID=B9S203_RICCO) HSP 1 Score: 83.6 bits (205), Expect = 1.350e-14 Identity = 53/197 (26.90%), Postives = 98/197 (49.75%), Query Frame = 1 Query: 181 MLYGYDFGITAWSVLMIKVRGAEGVSDIYAYLAARGEALGFLVACAPFGGFVEGVIGSKVSSSKGRKAEIQLANILCILGASLEGFAGLRNWNNVGYVLVFVIGRLIYGLGLGLSLRCGPMYLRETVTGPFKNAATVSVKLAMVIGTIVSYVAGGLLTNPTIGYFGVWI-------LAGTSLACLQVLPESPMFMLL 750 +LYGYD G T+ + + I+ + G+S + LG + + + +G + V+ ++ GR+ E+ +A +L ++GA + G A +V VIGR +YG+G+GL++ PMY+ ET + + +V+G + Y G LL + G+ +++ + G + CL P+SP ++LL Sbjct: 58 LLYGYDIGATSCATITIESATSSGIS----WYNLNAVQLGLITSGSLYGALIGSVVAFNIADFLGRRRELIVAALLYLVGALVTGLAP--------DFVVMVIGRFVYGIGIGLAMHAAPMYIAETAPSQIRGRLISLKEFFIVLGMVAGYGVGSLLVDIVRGWRYMYVASAPLAVIMGVGMWCL---PQSPRWILL 239
BLAST of mRNA_L-elsbetiae_contig11210.1094.1 vs. uniprot
Match: A0A6I9T5W5_SESIN (D-xylose-proton symporter-like 2 isoform X1 n=3 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9T5W5_SESIN) HSP 1 Score: 83.6 bits (205), Expect = 1.370e-14 Identity = 62/236 (26.27%), Postives = 115/236 (48.73%), Query Frame = 1 Query: 88 SSDAPALEEEYLKNMARRNLAITITCTSCMLM-------LYGYDFGITAWSVLMIKVRGAEGVSDIYAYLAARGEALGFLVACAPFGGFVEGVIGSKVSSSKGRKAEIQLANILCILGASLEGFAGLRNWNNVGYVLVFVIGRLIYGLGLGLSLRCGPMYLRETVTGPFKNAATVSVKLAMVIGTIVSYVAGGLLTNPTIGY---FGVW----ILAGTSLACLQVLPESPMFMLLH 753 S++ +EE LKN +R ++ + LYGYD G T+ + + IK + G+S + +G + + + +G + V+ V+ GR+ E+ L++++ ++GA + A N+ ++ VIGR IYG+G+GL++ PMY+ ET + + +V+G +V Y++G LL G+ +GV ++ G+ + L P SP ++LL Sbjct: 30 SAETDGIEEPLLKNDSREYEHFSVLSAILPFLFPAFGGLLYGYDIGATSSATISIKSATSSGIS----WYNLSPVEVGLITSGSLYGALIGSVLAFNVADFLGRRRELILSSLMYLIGALVTALA--PNF------VIMVIGRFIYGIGIGLAMHAAPMYIAETAPSQIRGQLISLKEFFIVLGMLVGYISGSLLVETVAGWRYMYGVSSPLAVIMGSGMWWL---PASPRWILLR 250
BLAST of mRNA_L-elsbetiae_contig11210.1094.1 vs. uniprot
Match: B7FX34_PHATC (TRD4 (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FX34_PHATC) HSP 1 Score: 83.2 bits (204), Expect = 1.690e-14 Identity = 57/200 (28.50%), Postives = 102/200 (51.00%), Query Frame = 1 Query: 187 YGYDFGITAWSVLMIKVRGAEGVSDIYAYLAA---RGEALGFLVACAPFGGFVEGVIGSKVSSSKGRKAEIQLANILCILGASLEGF-AGLRNWNNVGYVLVFVIGRLIYGLGLGLSLRCGPMYLRETVTGPFKNAATVSVKLAMVIGTIVSYVAGGLLTNPTIGYFGVWILAGTSLACLQVLPESPMFMLLHEERFPRA 774 +G+D G T+++++ ++ GVS + L++ RG L A A G + IG K+ GR+ E+QL ++L +LGA LE + A +W V + V ++GR++YG+G+G+S+ P Y+ E + + ++V+G + Y+ G + T G+ WI A +++ M ML+ R PR+ Sbjct: 31 FGFDIGATSYAIVQMQSPVLSGVSWFHTVLSSPILRGTILSSGSAGALIGSSLAFAIGDKI----GRRRELQLGSLLYLLGALLEVWTAQSSSWGAVLGITVLILGRVVYGIGIGISMHAAPTYIAEMGPSSIRGLLVSLKEASIVLGILTGYMIGYACSKHTGGW--AWIYASSTMFS--------MLMLILSTRIPRS 216
BLAST of mRNA_L-elsbetiae_contig11210.1094.1 vs. uniprot
Match: A0A8B7MTV8_PHODC (D-xylose-proton symporter-like 2 isoform X1 n=6 Tax=Arecaceae TaxID=4710 RepID=A0A8B7MTV8_PHODC) HSP 1 Score: 83.2 bits (204), Expect = 1.820e-14 Identity = 53/196 (27.04%), Postives = 97/196 (49.49%), Query Frame = 1 Query: 181 MLYGYDFGITAWSVLMIKVRGAEGVSDIYAYLAARGEALGFLVACAPFGGFVEGVIGSKVSSSKGRKAEIQLANILCILGASLEGFAGLRNWNNVGYVLVFVIGRLIYGLGLGLSLRCGPMYLRETVTGPFKNAATVSVKLAMVIGTIVSYVAGGLLTNPTIGYFGVWILAGTSLACLQV------LPESPMFMLL 750 +LYGYD G T+ + + ++ G + + +G +V+ + +G + ++ ++ GR+ E+ L+++L ++GA + A V V+GR +YG+G+GL++ PMY+ ET + + +VIG + YVAG + G+ +I A +SL CL + LP SP ++LL Sbjct: 57 LLYGYDIGATSSATISLESSALSGTT----WYNLSSLEIGLVVSGSLYGALIGSILAFNIADFLGRRRELILSSVLYLVGALITALAPSYP--------VMVVGRFVYGIGIGLAMHAAPMYIAETAPSQIRGILISLEEFFVVIGMLFGYVAGSFVVGLVAGWR--YIYAASSLVCLIMGIGMWWLPPSPRWLLL 238 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11210.1094.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11210.1094.1 >prot_L-elsbetiae_contig11210.1094.1 ID=prot_L-elsbetiae_contig11210.1094.1|Name=mRNA_L-elsbetiae_contig11210.1094.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp DDLRRSLVPPGTRSSSSNDVSAGSNGDEGSSDAPALEEEYLKNMARRNLAback to top mRNA from alignment at L-elsbetiae_contig11210:2470..5788- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11210.1094.1 ID=mRNA_L-elsbetiae_contig11210.1094.1|Name=mRNA_L-elsbetiae_contig11210.1094.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3319bp|location=Sequence derived from alignment at L-elsbetiae_contig11210:2470..5788- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11210:2470..5788- >mRNA_L-elsbetiae_contig11210.1094.1 ID=mRNA_L-elsbetiae_contig11210.1094.1|Name=mRNA_L-elsbetiae_contig11210.1094.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1596bp|location=Sequence derived from alignment at L-elsbetiae_contig11210:2470..5788- (Laminarionema elsbetiae ELsaHSoW15)back to top |