mRNA_L-elsbetiae_contig111.986.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig111.986.1
Unique NamemRNA_L-elsbetiae_contig111.986.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig111.986.1 vs. uniprot
Match: D7G581_ECTSI (Chlorophyll synthase, putative chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G581_ECTSI)

HSP 1 Score: 755 bits (1950), Expect = 6.070e-271
Identity = 374/422 (88.63%), Postives = 385/422 (91.23%), Query Frame = 1
Query:    1 MVVSCVFTSFAALSVVGVGAFHVPVLPSTRALGEARAGVGNRHVSRMSAADDKAPSFYPFQRSNAPPTRSSSV--LPLGAKPTPETQGGTKEGEGSTGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPLGGGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNVQVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVASIDATQLGIAAWLYSIGEPTYAAVLTAFVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1260
            MV   V  S  ALSV G GAFHVP LPS RA   A     NRHVSRMS ADDK  SFYPFQRS+AP TR  S+  L  G  PTPET+GGTKEGEG+ GAFRQLVGLKGASTTD+ILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNP GGGDVSFDLGSQDLLKALGCM+LSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMV ALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELN+QVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKW+CV SIDATQLGIAAWLY IGEPTYAA+LTA VLPQ+FAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALA+GHHTF
Sbjct:    1 MVSPWVVASVGALSVGGAGAFHVPALPSARATAAA-----NRHVSRMSTADDKPKSFYPFQRSDAPSTRPGSIPRLEAGVTPTPETKGGTKEGEGAGGAFRQLVGLKGASTTDEILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPFGGGDVSFDLGSQDLLKALGCMILSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVFALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWLCVGSIDATQLGIAAWLYYIGEPTYAAILTALVLPQVFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAMGHHTF 417          
BLAST of mRNA_L-elsbetiae_contig111.986.1 vs. uniprot
Match: A0A835YRI7_9STRA (Chlorophyll synthase, putative chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRI7_9STRA)

HSP 1 Score: 574 bits (1480), Expect = 1.120e-199
Identity = 288/369 (78.05%), Postives = 308/369 (83.47%), Query Frame = 1
Query:  154 DKAPSFYPFQRSNAPPTRSSSVLPLGAKPTPETQGGTKEGEGSTGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPLG--GGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNVQVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVASIDATQLGIAAWLYSIGEPTYAAVLTAFVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHH 1254
            ++A  FYPF           +V P  A+P           E   GA RQL+G+KGAS TDD+LKIRLQLTKPVTWIPL+WGV+CGAAASGNYH WNPL   G  VS      DL KAL CMVL+GPFLTGYTQTINDWYDRDIDAINEPYRPIPSG I+E QV  QI FLL GGLA+AYGLD+WAGHD P +L LS+ GSFISYIYSAPP+KLKQNGWLGNYALGSSYISLPWWCGQAMFGELN+QVV+LTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVE AKWICVASID TQLGIAAWLYS+GEPTYAAVLTA VLPQI+AQFKYFLPDPV NDVKYQATAQPFLVFGILTTALAVG H
Sbjct:   47 ERAAPFYPFP---------DAVAPSAARPRAAVAPLRASKEDGDGAVRQLLGVKGASDTDDLLKIRLQLTKPVTWIPLLWGVICGAAASGNYHTWNPLAAEGTAVSGADALGDLAKALVCMVLAGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGKITEGQVKAQIAFLLGGGLALAYGLDLWAGHDTPTILLLSIFGSFISYIYSAPPLKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNIQVVVLTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVETAKWICVASIDLTQLGIAAWLYSVGEPTYAAVLTALVLPQIYAQFKYFLPDPVENDVKYQATAQPFLVFGILTTALAVGRH 406          
BLAST of mRNA_L-elsbetiae_contig111.986.1 vs. uniprot
Match: B7G006_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G006_PHATC)

HSP 1 Score: 518 bits (1334), Expect = 2.420e-177
Identity = 257/382 (67.28%), Postives = 295/382 (77.23%), Query Frame = 1
Query:  127 HVSRMSAADDKAPSFYPFQRSNAPPTR--SSSVLPLGAKPTPETQGGTKEGEGSTGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPLGGGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNVQVV-ILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVASIDATQLGIAAWLYSIGEPTYAAVLTAFVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1260
            H    S    K  SFYPF  S+   T+  ++S + L AKP P       E E  +   RQL+GLKGAS   +I KIRLQLTKPVTWIPL+WGV+CGAAASGNYHW WNPL   D +  LG +D LK    M+L+GPFLTGYTQTINDWYDR+IDAINEPYRPIPSGAISE +VI QIW LLLGGL IAYGLDVWAGH+ P VL LS+ GSFISYIYSAPP+KLKQNGW GNYALG+SYISLPWWCGQA+FG L+  V  IL +LYS AGLGIAIVNDFKS+EGDR +GLQSLPVAFG++KAKWIC  S+  TQLG+AA+L ++GE  YA +L A +LPQ++ Q    LPDPV NDVKYQA+AQPFLVFGIL TAL +GHH F
Sbjct:   45 HARHKSLRPPKTSSFYPFDESSTTSTKRPTTSGVSLQAKPGPNA-----EAEDGSAGVRQLLGLKGASAESNIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPLDPNDRNVMLGLEDALKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWILLLGGLGIAYGLDVWAGHETPTVLLLSIFGSFISYIYSAPPLKLKQNGWAGNYALGASYISLPWWCGQAVFGTLDKPVYFILPILYSIAGLGIAIVNDFKSIEGDRALGLQSLPVAFGIDKAKWICAGSVTLTQLGVAAYLQTLGESLYAGILIALILPQMYFQATLLLPDPVENDVKYQASAQPFLVFGILATALCIGHHDF 421          
BLAST of mRNA_L-elsbetiae_contig111.986.1 vs. uniprot
Match: A0A7S1XSB6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSB6_9STRA)

HSP 1 Score: 518 bits (1333), Expect = 4.240e-177
Identity = 260/367 (70.84%), Postives = 298/367 (81.20%), Query Frame = 1
Query:  166 SFYPFQRSNAPPTRSSSVLPLGAKPTPETQGGTKEGEGSTGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPLGGGDVSFDLGS--QDLLKALGCMVLSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNVQVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVASIDATQLGIAAWLYSIGEPTYAAVLTAFVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1260
            SF+PF++S  P    +  + +  + T   Q   +  +G  GA RQL+G+KGAS TD+I KIRLQLTKPVTW+PLIWGV+CGAAASGNYH WNP    D + D+ +  +D LKA  CM+LSGPFLTGYTQTINDWYDR+IDAINEPYRPIPSGAISE +VI QIWFLLLGGL +A  LD+WAGH+ P V  LS+ GSFISYIYSAPP+KLKQNGW+GNYALGSSYISLPWWCGQAMFGELN QV ILTLLYSWAGLGIAIVNDFKSVEGDR MGLQSLPVAFGV+KAKWICVASIDATQ  +AA+L   G+  YAA LTA +LPQ++ Q K+FL DPV  DV+YQA+AQPFLV GIL TALAVGH  +
Sbjct:   69 SFFPFEKSQMP---FADPMAVEKESTVTLQAKKEANDG--GAARQLLGVKGASETDNIWKIRLQLTKPVTWVPLIWGVVCGAAASGNYHTWNPF---DATVDVSACTEDALKAFVCMILSGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIFQIWFLLLGGLGLAGALDLWAGHETPTVFLLSLFGSFISYIYSAPPLKLKQNGWIGNYALGSSYISLPWWCGQAMFGELNWQVCILTLLYSWAGLGIAIVNDFKSVEGDRAMGLQSLPVAFGVDKAKWICVASIDATQAAVAAYLAYNGQYGYAAALTALILPQMYFQQKFFLKDPVEYDVQYQASAQPFLVLGILVTALAVGHADY 427          
BLAST of mRNA_L-elsbetiae_contig111.986.1 vs. uniprot
Match: A0A7S2Q1P8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q1P8_9STRA)

HSP 1 Score: 513 bits (1321), Expect = 1.320e-175
Identity = 259/379 (68.34%), Postives = 295/379 (77.84%), Query Frame = 1
Query:  130 VSRMSAADDKAPSFYPFQRSNAPPTRSSSVLPLGAKPTPETQGGTKEGEGSTGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPLGGGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNVQVV-ILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVASIDATQLGIAAWLYSIGEPTYAAVLTAFVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1260
            +S +   ++   SFYPF     P T SSS   L AKP P +     +G       RQL+G+KGA+ ++DI KIRLQLTKPVTWIPL+WGV+CGAAASGNYHW WNP    D    LG +D  K    M+L+GPFLTGYTQTINDWYDR+IDAINEPYRPIPSGAISE QVI QIWFLLLGGL IAYGLDVWAGHDFP VLALS+ GS++SYIYSAPP+KLKQNGW GNYALG SYISLPWWCGQA+FGEL+  V  IL +LYS AGLGIAIVNDFKSVEGDR+MGL SLPVAFG++ AK+IC  S+  TQLG+AA+LYSIGE  YAA L A +LPQI+ Q    LPDPV NDVKYQA++QPF VFGIL TAL +GHH F
Sbjct:   37 LSMLPTNNNNEDSFYPF-----PSTESSSNFRLDAKP-PTSNDEVTDGSAD---LRQLLGVKGAAGSEDIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPFDPNDRDVMLGLEDTAKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGQVIFQIWFLLLGGLGIAYGLDVWAGHDFPTVLALSIFGSWVSYIYSAPPLKLKQNGWAGNYALGCSYISLPWWCGQAVFGELDRPVYFILPILYSIAGLGIAIVNDFKSVEGDRQMGLNSLPVAFGIDGAKYICAGSVTLTQLGVAAYLYSIGETNYAAGLLALLLPQIYFQATLLLPDPVANDVKYQASSQPFFVFGILATALCLGHHDF 406          
BLAST of mRNA_L-elsbetiae_contig111.986.1 vs. uniprot
Match: B8C067_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C067_THAPS)

HSP 1 Score: 512 bits (1319), Expect = 1.920e-175
Identity = 260/386 (67.36%), Postives = 299/386 (77.46%), Query Frame = 1
Query:  112 GVGNRHVS-RMSAADDKAPSFYPFQRSNAPPTRSSSVLPLGAKPTPETQGGTKEGEGSTGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPLGGGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNVQVV-ILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVASIDATQLGIAAWLYSIGEPTYAAVLTAFVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1260
            GV  R  S  M     +  SFYPF + ++  ++ S+V P   K   E   G+ +        RQL+G+KGAS T DI KIRLQLTKPVTWIPL+WGV+CGAAASGNYHW WNP    D +  LG +D+ K    M+L+GPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISE QVI QIWFLLLGGL IAYGLDVWAGHDFP VLALS+ GS++SYIYSAPP+KLKQNGW GNYALG SYISLPWWCGQA+FGEL+  V  +L +LYS AGLGIAIVNDFKS+EGDRE+GLQSLPVAFGV+ AK+IC  S+  TQLG+AA+L SIGE TYAA+L   +LPQI+ Q    LPDPV NDVKYQA++QPF VFGIL TAL +GHH F
Sbjct:   24 GVQQRSSSLSMLPTKQQTDSFYPFDKESS--SKLSAVPP---KSNEEVSDGSAD-------VRQLLGVKGASGTTDIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPFDPNDRNVMLGLEDMAKGFVAMILAGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEGQVIFQIWFLLLGGLGIAYGLDVWAGHDFPTVLALSIFGSWVSYIYSAPPLKLKQNGWAGNYALGCSYISLPWWCGQAVFGELDRPVYFVLPILYSIAGLGIAIVNDFKSIEGDRELGLQSLPVAFGVDGAKYICAGSVTLTQLGVAAYLQSIGETTYAAILLGLLLPQIYFQATLLLPDPVANDVKYQASSQPFFVFGILATALCLGHHDF 397          
BLAST of mRNA_L-elsbetiae_contig111.986.1 vs. uniprot
Match: A0A7S1ZAA9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAA9_TRICV)

HSP 1 Score: 510 bits (1314), Expect = 2.820e-175
Identity = 255/367 (69.48%), Postives = 288/367 (78.47%), Query Frame = 1
Query:  166 SFYPFQRSNAPPTRSSSVLPLGAKPTPETQGGTKEGEGSTGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPLGGGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNVQVV-ILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVASIDATQLGIAAWLYSIGEPTYAAVLTAFVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1260
            SF PF  S     RS + LP    P  +   G+       G  RQL+GLKGAS T D  KIRLQLTKPVTW+PL+WGV+CGAAASGNYHW WNP    D    LG++D LK    M+L+GPFLTGYTQTINDWYDR+IDAINEPYRPIPSGAISE +VI QIW LLLGGL IAYGLDVWAGH+FP VLALSV GSFISYIYSAPP+KLKQNGW GN+ALG+SYISLPWWCGQA+FGEL+  V  IL +LYS AGLGIAIVNDFKS+EGDR +GL SLPVAFG++ AK+IC  S+  TQLG+A +LYSI EPTYAA+L A +LPQI+ Q    LPDPV NDVKYQA++QPFLVFGIL TAL VGHH F
Sbjct:    4 SFSPFADSR----RSETSLPASRGPNEKATDGS-------GDVRQLLGLKGASETTDKWKIRLQLTKPVTWVPLVWGVMCGAAASGNYHWMWNPFDPNDRDVLLGAEDALKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWILLLGGLGIAYGLDVWAGHEFPTVLALSVFGSFISYIYSAPPLKLKQNGWAGNFALGASYISLPWWCGQAVFGELDKPVYWILPILYSIAGLGIAIVNDFKSIEGDRALGLNSLPVAFGIDGAKYICAGSVTLTQLGVAGYLYSINEPTYAAILLALILPQIYFQATLLLPDPVENDVKYQASSQPFLVFGILATALCVGHHDF 359          
BLAST of mRNA_L-elsbetiae_contig111.986.1 vs. uniprot
Match: K0RLR8_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RLR8_THAOC)

HSP 1 Score: 510 bits (1314), Expect = 1.870e-174
Identity = 255/372 (68.55%), Postives = 289/372 (77.69%), Query Frame = 1
Query:  151 DDKAPSFYPFQRSNAPPTRSSSVLPLGAKPTPETQGGTKEGEGSTGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPLGGGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNVQVV-ILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVASIDATQLGIAAWLYSIGEPTYAAVLTAFVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1260
            D    S+YPF  S    T S  ++ L A+P P++     +G  +    RQL+GLKGAS T DI KIRLQLTKPVTWIPL+WGV+CGAAASGNYHW WNP    D    LG +D  K    M+L+GPFLTGYTQTINDWYDR+IDAINEPYRPIPSGAISE QVI QIWFLLLGGL IAYGLD WAGHD P VL LS+ GSFISYIYSAPP+KLKQNGW GNYALG SYISLPWWCGQA+FGEL+  V  IL +LYS AGLGIAIVNDFKSVEGDR++GLQSLPVAFG++ AKWIC  S+  TQLG+AA+L SI E TYAA+L   +LPQI+ Q    +PDPV NDVKYQA++QPF VFGIL TAL +GHH F
Sbjct:   49 DSTRASYYPFGAS----TSSDRLISLSARP-PKSNEEVTDGSANV---RQLLGLKGASETTDIWKIRLQLTKPVTWIPLVWGVMCGAAASGNYHWIWNPFDPNDRDVMLGLEDTAKGFVAMILAGPFLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGQVIAQIWFLLLGGLGIAYGLDAWAGHDVPTVLLLSIFGSFISYIYSAPPLKLKQNGWAGNYALGCSYISLPWWCGQAVFGELDRPVYFILPILYSIAGLGIAIVNDFKSVEGDRQLGLQSLPVAFGIDTAKWICAGSVTVTQLGVAAYLQSINETTYAAILMGLLLPQIYYQATLLIPDPVANDVKYQASSQPFFVFGILATALCLGHHDF 412          
BLAST of mRNA_L-elsbetiae_contig111.986.1 vs. uniprot
Match: A0A7S0CSL5_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CSL5_9EUKA)

HSP 1 Score: 512 bits (1318), Expect = 2.680e-173
Identity = 244/326 (74.85%), Postives = 279/326 (85.58%), Query Frame = 1
Query:  286 GAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHW-WNPLGGGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNVQVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVASIDATQLGIAAWLYSIGEPTYAAVLTAFVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHHTF 1260
            G+ RQL+GLKGAS TD+I KIRLQL KPVTW+PLIWGV+CGAAASGNYH  W+         ++  +D+ K+LGCM+L+GP LTGYTQTINDWYDR+IDAINEPYRPIPSGAISE +VI QIW LLLGGL +AYGLD WAGHDFPMV ALS+GGSF+SYIYSAPP+KLKQ+GW GNYALGSSYI+LPWWCGQAMFG LN  V++L+LLYS AGLGIAIVNDFKS+EGDR++GLQSLPVAFGV+ AKWIC  SID TQLG+AA+LYSIGE TYA +L   +LPQ+F Q KY L DP+  DV+YQA AQPFLVFGIL TALAVGHHTF
Sbjct:  211 GSVRQLLGLKGASQTDNIWKIRLQLMKPVTWVPLIWGVVCGAAASGNYHSIWS-----GAPLEVCLEDVGKSLGCMLLAGPLLTGYTQTINDWYDREIDAINEPYRPIPSGAISEGEVIAQIWALLLGGLGLAYGLDQWAGHDFPMVTALSIGGSFVSYIYSAPPLKLKQSGWAGNYALGSSYIALPWWCGQAMFGTLNAPVIVLSLLYSIAGLGIAIVNDFKSIEGDRQLGLQSLPVAFGVDTAKWICAGSIDITQLGVAAYLYSIGETTYANILMGLILPQMFLQNKYLLKDPIKYDVQYQAAAQPFLVFGILDTALAVGHHTF 531          
BLAST of mRNA_L-elsbetiae_contig111.986.1 vs. uniprot
Match: A0A6V1M160_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1M160_HETAK)

HSP 1 Score: 506 bits (1302), Expect = 6.470e-173
Identity = 250/370 (67.57%), Postives = 291/370 (78.65%), Query Frame = 1
Query:  154 DKAPSFYPFQRSNAPPTRSSSVLPLGAKPTPETQGGTKEGEGSTGAFRQLVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPLG---GGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDRDIDAINEPYRPIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSVGGSFISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNVQVVILTLLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVASIDATQLGIAAWLYSIGEPTYAAVLTAFVLPQIFAQFKYFLPDPVGNDVKYQATAQPFLVFGILTTALAVGHH 1254
            DK+ +F+PF+ S    T+      L AK          E +   G  +QL+G++GAS TDD+L+IR+QLTKPVTWIPLIWGV+CGAAASGNY W NPL     G V  D G  D  K + CM+L+GPFLTG+TQTINDWYDR+IDAINEP RPIPSG ISE++VI QIWFLLLGGL +AYG+DVW GHD P V  LSV GSFISYIYSAPP+KLKQ+ W+GNYALG+SYI+LPWWCGQA FGEL   VV+LT+LYS AGLGIAIVNDFKS+EGDR +GLQSLPVAFGVEKAKWICV++ID TQL +AA+LY  G+PTY  VL   VLPQI  Q KY +PDP+ NDVKYQA+AQPFLVFGILTTALA+GH 
Sbjct:   40 DKSKTFFPFESSMPSSTQ------LMAKKD------DSEEKDDRGDLKQLLGIRGASETDDVLRIRIQLTKPVTWIPLIWGVICGAAASGNYEWSNPLTVGMEGHVPLDKGLSDFAKVVTCMILAGPFLTGFTQTINDWYDREIDAINEPNRPIPSGKISEEEVIGQIWFLLLGGLGLAYGIDVWVGHDVPTVFLLSVFGSFISYIYSAPPLKLKQS-WVGNYALGASYIALPWWCGQAAFGELTWDVVVLTVLYSLAGLGIAIVNDFKSIEGDRALGLQSLPVAFGVEKAKWICVSTIDVTQLAVAAYLYWSGQPTYGLVLLGLVLPQIALQAKYLIPDPINNDVKYQASAQPFLVFGILTTALAIGHR 396          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig111.986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G581_ECTSI6.070e-27188.63Chlorophyll synthase, putative chloroplast n=1 Tax... [more]
A0A835YRI7_9STRA1.120e-19978.05Chlorophyll synthase, putative chloroplast n=1 Tax... [more]
B7G006_PHATC2.420e-17767.28Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S1XSB6_9STRA4.240e-17770.84Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2Q1P8_9STRA1.320e-17568.34Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8C067_THAPS1.920e-17567.36Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S1ZAA9_TRICV2.820e-17569.48Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
K0RLR8_THAOC1.870e-17468.55Uncharacterized protein n=2 Tax=Thalassiosira ocea... [more]
A0A7S0CSL5_9EUKA2.680e-17374.85Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A6V1M160_HETAK6.470e-17367.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig111contigL-elsbetiae_contig111:32706..38120 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score759.2
Seed ortholog evalue1e-216
Seed eggNOG ortholog2880.D7G581
Preferred nameCHLG
KEGG rclassRC00020
KEGG koko:K04040
KEGG ReactionR06284,R09067,R11514,R11517
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009534,GO:0009536,GO:0009579,GO:0031976,GO:0031984,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
EggNOG free text desc.chlorophyll synthetase activity
EggNOG OGs2QQMP@2759,COG0382@1
EC2.5.1.133,2.5.1.62
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01006
Ec32 ortholog descriptionChlorophyll synthase, putative chloroplast precursor
Ec32 orthologEc-14_006550.1
Exons8
Model size1858
Cds size1263
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815324.1710699-CDS-L-elsbetiae_contig111:32705..329111622815324.1710699-CDS-L-elsbetiae_contig111:32705..32911Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 32706..32911 +
1691682839.1580873-CDS-L-elsbetiae_contig111:32705..329111691682839.1580873-CDS-L-elsbetiae_contig111:32705..32911Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 32706..32911 +
1622815324.182175-CDS-L-elsbetiae_contig111:33205..333151622815324.182175-CDS-L-elsbetiae_contig111:33205..33315Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 33206..33315 +
1691682839.1753843-CDS-L-elsbetiae_contig111:33205..333151691682839.1753843-CDS-L-elsbetiae_contig111:33205..33315Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 33206..33315 +
1622815324.1925187-CDS-L-elsbetiae_contig111:33836..339411622815324.1925187-CDS-L-elsbetiae_contig111:33836..33941Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 33837..33941 +
1691682839.1838028-CDS-L-elsbetiae_contig111:33836..339411691682839.1838028-CDS-L-elsbetiae_contig111:33836..33941Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 33837..33941 +
1622815324.204558-CDS-L-elsbetiae_contig111:34477..346021622815324.204558-CDS-L-elsbetiae_contig111:34477..34602Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 34478..34602 +
1691682839.1922443-CDS-L-elsbetiae_contig111:34477..346021691682839.1922443-CDS-L-elsbetiae_contig111:34477..34602Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 34478..34602 +
1622815324.215809-CDS-L-elsbetiae_contig111:35239..353201622815324.215809-CDS-L-elsbetiae_contig111:35239..35320Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 35240..35320 +
1691682839.2001686-CDS-L-elsbetiae_contig111:35239..353201691682839.2001686-CDS-L-elsbetiae_contig111:35239..35320Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 35240..35320 +
1622815324.2281091-CDS-L-elsbetiae_contig111:35717..359751622815324.2281091-CDS-L-elsbetiae_contig111:35717..35975Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 35718..35975 +
1691682839.2125015-CDS-L-elsbetiae_contig111:35717..359751691682839.2125015-CDS-L-elsbetiae_contig111:35717..35975Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 35718..35975 +
1622815324.2378438-CDS-L-elsbetiae_contig111:36762..370611622815324.2378438-CDS-L-elsbetiae_contig111:36762..37061Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 36763..37061 +
1691682839.2217255-CDS-L-elsbetiae_contig111:36762..370611691682839.2217255-CDS-L-elsbetiae_contig111:36762..37061Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 36763..37061 +
1622815324.2490795-CDS-L-elsbetiae_contig111:37446..375251622815324.2490795-CDS-L-elsbetiae_contig111:37446..37525Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 37447..37525 +
1691682839.232762-CDS-L-elsbetiae_contig111:37446..375251691682839.232762-CDS-L-elsbetiae_contig111:37446..37525Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig111 37447..37525 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815324.2600787-UTR-L-elsbetiae_contig111:37525..381201622815324.2600787-UTR-L-elsbetiae_contig111:37525..38120Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig111 37526..38120 +
1691682839.2431018-UTR-L-elsbetiae_contig111:37525..381201691682839.2431018-UTR-L-elsbetiae_contig111:37525..38120Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig111 37526..38120 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig111.986.1prot_L-elsbetiae_contig111.986.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig111 32706..37525 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig111.986.1

>prot_L-elsbetiae_contig111.986.1 ID=prot_L-elsbetiae_contig111.986.1|Name=mRNA_L-elsbetiae_contig111.986.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=421bp
MVVSCVFTSFAALSVVGVGAFHVPVLPSTRALGEARAGVGNRHVSRMSAA
DDKAPSFYPFQRSNAPPTRSSSVLPLGAKPTPETQGGTKEGEGSTGAFRQ
LVGLKGASTTDDILKIRLQLTKPVTWIPLIWGVLCGAAASGNYHWWNPLG
GGDVSFDLGSQDLLKALGCMVLSGPFLTGYTQTINDWYDRDIDAINEPYR
PIPSGAISEKQVIEQIWFLLLGGLAIAYGLDVWAGHDFPMVLALSVGGSF
ISYIYSAPPIKLKQNGWLGNYALGSSYISLPWWCGQAMFGELNVQVVILT
LLYSWAGLGIAIVNDFKSVEGDREMGLQSLPVAFGVEKAKWICVASIDAT
QLGIAAWLYSIGEPTYAAVLTAFVLPQIFAQFKYFLPDPVGNDVKYQATA
QPFLVFGILTTALAVGHHTF*
back to top

mRNA from alignment at L-elsbetiae_contig111:32706..38120+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig111.986.1 ID=mRNA_L-elsbetiae_contig111.986.1|Name=mRNA_L-elsbetiae_contig111.986.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5415bp|location=Sequence derived from alignment at L-elsbetiae_contig111:32706..38120+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGTTTCTTGCGTGTTCACGTCGTTTGCGGCGTTGTCTGTTGTCGG GGTCGGAGCTTTCCACGTCCCGGTACTCCCCTCGACCAGAGCTCTCGGAG AAGCGAGGGCCGGAGTTGGCAACCGACATGTTTCGCGCATGTCTGCCGCT GATGACAAGGCTCCGAGCTTCTACCCTTTCCAACGAAGCAATGCACCGCC GACCAGGTATGTGGCTTAGATTCCTAAGTTAAACCGCTGATCCCGCTGAA GGCTGCCGCAGGATCGGGCTGTCTATAAAAATCACCGAACATGTGTCTTC GTCATGTCTTGTGTCTTCCTCATGCTACACACAGCTAACACAAAGGCCAC TTCCTTGTGTCCCCACGATTACAGAGACGTCGTTGCGAACCCATTCACAC GAGACTACACCTGTTGAAAAAAAATGCACCAGGGCGTTCTGAAGCGCTTG AAACGACACGTGTGTTGCCCCTTCACCGCAACCTGCCGATGCGGAAACAG GTCAAGCTCGGTGCTGCCTCTCGGCGCGAAACCCACCCCAGAGACGCAGG GGGGAACGAAGGAGGGGGAGGGCTCGACTGGTGCTTTCCGCCAGCTCGTT GGTCTCAAAGGTGCGGACACGTGTTGGCGACAGTACTGTGTATATATATA TGTATTCGTGCACTGTTTGCGTGTTTTCATGTATCGAAGGCGACGAAGTC CGGGAGGGTGGTCTAATGTGTGTGGGGATGGTTCGCACAGCAGGCAGCCG CAGCGTGGAACCCGCTACCGTTGTTGTGTGCGTGCGCTCTCTCGTTCGGT AGACATGTTAAAGCGATGTCCTGAAATATGAGCCCACTGAGCTGTATGTA ATATATTTGGTGTCAAGGCGGTGTTTTGTGTCTGCTGATCAACGTGCCCT TGGTTCTTTCTTTCTCTTCTACATACATATTCCTTAATTATTTGCAACAT CAGCCAGCCCTAAAAGCTCACGGCAAGCTCCTCTGCCTCTGAGGAGGGGG CACACACACACATGCCGAGTCTCAGCTGTTGCTCTGCCACCACTCTACTT AATAGGTACTCCTCGCTAGATTTTCATTTTTCAGTTCGATGTTCGTTTTC GTCGGTTCGGAACCCCCCCCCCCGTGTACAGGCGCCTCGACGACCGACGA TATCTTGAAGATCCGTCTGCAGTTGACCAAGCCCGTCACGTGGATCCCTC TGATCTGGGGAGTCCTGTGCGGCGCAGCTGCGTCAGGTGCGTATGTACAT GCAGCAGTACTTTCATATGTTTTGCGCGACGACGGACTTCCCGAAGGTCT GCTGATGAGCCTCGAAGAAGACGCCGTGTCGTGTGCTGGCCGTTTTTGTC TTGTGTGTGTTGTGCTGCTCTCGAGGGTGTTCATTGTACTGCTGTACCGC TGGGAAGCATGGTGCATGGTTGGTCTACAGCAGTCTAATTTATCTCCAAA CATATGTGAGCGAGGTATACGCAAATAGCAAGCATCTTCGAAGTATTGGA CATATTCGCGTGTGTTTTTAAATGTTGAAATGTCCTCGGTCGGTACGTAC GCCAGAGTATATGTTTATCGCAGGTAGGTCGTGCGAGTCCTACCGGAGTT GCGAGCATCTGTGTGCGGTAGCGGACGATAGCGTTCATGAATTGACGCAC GACCTGGCAAGCCGGCGGTCCGAGTGCCAACCAGGACGATCTGGCCCAAA ACCACAACAGTACCGCCGCACTCCCGGTTTCGTTTGAACCGTCTCTCGTG TTCTCTCCTCTTGGGTCTGCAGGCAACTACCACTGGTGGAACCCGTTGGG AGGGGGGGACGTGAGCTTTGACCTTGGCTCGCAGGACTTGTTGAAGGCCC TCGGCTGCATGGTGCTGTCTGGGCCTTTCCTGACGGGCTACACCCAGGTG CGCGGCGGCTAAAATACCTTGCACAGTGTTTTTTTTTCTTGCGGTCGGTT TTGCTAAAATGTATCTACGAAATTACCCAACTCACGCAAAAGGGTCTCCG CCAGTTTCAACGCGAAGGAAAGAAGGAGCAGTGAAGAAGTACGCGGAACT TTTTCGGTTTTCTACAATGTACGTACGCTGTTGTTGTTTTCTTCACGCCA TGTAGCTCGTATAGTCGAGATTGCTAATCCCAAAGAATCTAGCAACTCAC GGCCCGTGGTCACGAAAGTGCCGGAGCCATCAAAAGATCCTATAAGAAAC ACACGCAGGAAATGAGAGGTACACGTAATTTCCAGCAACGTTGATGTGTG TCCAACTATCGAAACCACAAGTCTACAATCTCCATTCGACGACTACATAC ACGCAGTCTACCCCCCCCCTCTCGTTCCACTACTAGCCGGTCGTAGTTGC CGACCTTCAGCAATAAAGCTACTCTGTGTAAAGCTAGCTGCCTGTACAAA GAGGCGCGGCAACAGTAGAGACAAAACATATGTGTGTATGCACACCTCAA CAGAAAAGGCGCGTTCCCCTCAAGCATGTTATTGGTTCTGACGACCTGTC GGTTCTCTTTGTTCTATTGTTCTCTTGTGCGCAGACAATCAACGACTGGT ACGACAGGGATATCGATGCCATCAACGAGCCATACCGCCCTATTCCGTCG GGTGCAATCTCAGAGGTCAGCGTGGTTTTTCCTTGCAGCCCTTTCTAGTG AAACGCAGAGGATTTCGGGCTTTGTTTCGAATCTGTGTGCTCTTTTTCTC CAAGCTGTGATTTCATTGTCGTTTGCTGCACGCGGTAGATACATGTCAGC TGTTGCCGTTGCTGTTGCTGTTGTTGCTGTTGTTGTTGTTGCCATCACAT TAAATGCTACCAACGATTAACTTTTTGCTCTTACTGAGTAAGATGGCAGT TTTTTCGTTTTTTTTTCTCCCAAAATGTTGTTGCTGTTTGTCCCCTCCCC CCTGCCTTGTCGCCAAATCGCCTTCGGTCCCATCCCGCCATCCCTGCCAG TATTGACCCGCTCTTTTCCCAACGACACACCGGGCCCATTTTCCTGCTTT CGCTGGGCACAGAAACAAGTCATCGAGCAGATTTGGTTTTTGCTTCTCGG CGGGCTCGCGATCGCGTACGGGCTTGACGTGTGGGCCGGCCACGACTTCC CGATGGTCCTGGCGCTTTCCGTGGGGGGGTCGTTTATCTCGTACATCTAC TCGGCGCCGCCGATCAAGCTGAAACAGAACGGCTGGTTGGGTAACTACGC TCTCGGGTCGTCCTACATCTCGCTGCCATGGTGGTGCGGCCAGGCCATGT TCGGGGAGCTCAACGTCCAGGCAAGCTCTATTTTCCGCTTCCTCTGTGGA GTCTGCTCGAAACACTCGCTTTTTTTTGTTTTGTTTTTTTGTTTGTTTTT TCTTCTTCACATTTTTTTCCAGTGCTCGACGGGCTCCTTGCCATGAAGAA ACCTTGCCAAGAGTACTGAATCGTGGTCACACGGAAGGGTTCCTTTCCCC GAGGTCTCCACTCCCACCTTCTGCGATGCTTGCCTAAGAATTTTGTCGCG AGAAGGGTTTAGCCGTCTCTTTACCTCGTCGATATATCCTACATACAAGT GTCCACTGAAATGGCAGATGTACAACTGTTGTTGGTGTTTCGGTGTCTCT TATGCAGGTAGATGCGTCGGGTTTGCGGTGGGAATTTTGTTTCGCGGAGG TTTTACCGAGATTTTATCGCTCTTTTGCGGGTATTAGTAGTTTAACGACC TTTTGCACAAGCGATAATTGATGCCTTTGTCGCTTACCTCGTGTTTCCTG GTCGCGGCGTGAGGGTGCGCAGCGGGTGTTGCAAGGCGTTGGGGCTTGCG TTGCAGCGTTGCTACTTGTAGCAGCCTGGTTGGTTGCCCGCGGTAACACT CGTCATACTTTTCATTACGTGTGGCAATCCCAAAAGTGTATCTATATGTA GCGGAAAACTCCTGCAGTAGCGAAGCGCGTCCCGGATGTCCATGGACAGT AGTAGTGTCCACCCGATGACTCCGTCCTGGGTCCTTACGCCCGCCTGGAA CCGCCCAACCATACGTTCACGCTTGCGCGGCAATATACATACCTTTTTCG CCCACAGGTGGTTATCCTCACCCTTTTGTACTCGTGGGCTGGACTGGGGA TCGCGATCGTGAACGACTTCAAGAGCGTGGAGGGCGACAGGGAAATGGGC CTCCAGTCTCTCCCCGTGGCGTTCGGGGTGGAGAAGGCGAAGTGGATATG CGTGGCCTCGATCGATGCCACGCAGCTGGGCATCGCTGCCTGGCTGTACT CTATCGGGGAGCCAACCTACGCGGCCGTTTTGACGGCGTTCGTTTTACCG CAGATTTTCGCGCAGTTCAAGTACTTCCTGCCGGACCCCGTGGGGAATGA CGTCAAGTGAGTCTTCTGCTTTGTGTTGGCAAAGCCGGCGTTTTTTTTAT GCCGCGGTGTGTCTGTCGAACTTCTCGTGACGATTCAGCCGCGAACGGCC CATAAATGAAACCGCCGCACAAAACAGCAGTAGTGGATTTTTCTGCCCAA GGCGCGGCGAGTAATCGATGTAGTTCGGTCAGTCATGGACGAGGGTCCGG CCCCATTGATGTCGCACGCGCTTCTCCCGTCTTTTGTTTTCGTCTCCTCT CAGTCCAGGCACTGGCTAGAGGCGTGTAGCTCGGCAGCAAGCTCTACGAG TACAGAGTAGTAGCGCAAACCAGTTTCTACAGTAGTAACTCATTCGTCCT CCTTCCTTGTTCGACGATGCACCCCGTCGTTTTTGTCACAGGTACCAGGC GACGGCGCAGCCCTTCCTAGTTTTCGGCATTCTTACCACGGCTTTGGCTG TGGGGCACCACACCTTCTAGGTCTATGAAGTAGACTGTTGTCCACGACTG CTGTAGGTTAAGCCTGGCTGACTGCGTGAAGAGCTGGTTGTTGCGTTGAA GGGGAACCGTCGGTCCCGCCTGCTGCCTGTATTTGTTTGGCCAGCGATGG CCTCTGCTAGAGCTATGATATATAGACGCACGTTTCTCTAGCTGCGTGGG TGTCCGTTGGTGTGTGGGGCGACTGAAGAGCGCCGCGAGGAACGACACGG CTTGGTTCAGCGTAGAGATGGATGACAGTTGATTCTCAGCGTCACTTTTT TCGTTGAGTCTGCCGAGGTTGAAGAGAAGCAACACAACAACTGGGGTCTA GCATAAGTTTTCCGACGTTGTTTGCAGCGCATCGGTTGTCGCTGCTTGCT GCATTACGCGAGGCTTGACACGATTGCGTATTTCAAGCAGGCCTTCGCCC AAGCGTCGGCGGTGCCTCTATAAAGCAATCGTGCGACTGGTGCTGTTTAC TGCTCGAAGAGGGGTGCGCGTGGGAACTGGCTATCTACTATGACACGGCC AAAGCAAAGCGACAAAGTAGTGAGCGAACAGCAGCAGCAGTGTTACTCGT GATCGCACCCCGCCA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig111:32706..38120+

>mRNA_L-elsbetiae_contig111.986.1 ID=mRNA_L-elsbetiae_contig111.986.1|Name=mRNA_L-elsbetiae_contig111.986.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2526bp|location=Sequence derived from alignment at L-elsbetiae_contig111:32706..38120+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGTTTCTTGCGTGTTCACGTCGTTTGCGGCGTTGTCTGTTGTCGG
GGTCGGAGCTTTCCACGTCCCGGTACTCCCCTCGACCAGAGCTCTCGGAG
AAGCGAGGGCCGGAGTTGGCAACCGACATGTTTCGCGCATGTCTGCCGCT
GATGACAAGGCTCCGAGCTTCTACCCTTTCCAACGAAGCAATGCACCGCC
GACCAGATGGTGGTTTCTTGCGTGTTCACGTCGTTTGCGGCGTTGTCTGT
TGTCGGGGTCGGAGCTTTCCACGTCCCGGTACTCCCCTCGACCAGAGCTC
TCGGAGAAGCGAGGGCCGGAGTTGGCAACCGACATGTTTCGCGCATGTCT
GCCGCTGATGACAAGGCTCCGAGCTTCTACCCTTTCCAACGAAGCAATGC
ACCGCCGACCAGGTCAAGCTCGGTGCTGCCTCTCGGCGCGAAACCCACCC
CAGAGACGCAGGGGGGAACGAAGGAGGGGGAGGGCTCGACTGGTGCTTTC
CGCCAGCTCGTTGGTCTCAAAGGTCAAGCTCGGTGCTGCCTCTCGGCGCG
AAACCCACCCCAGAGACGCAGGGGGGAACGAAGGAGGGGGAGGGCTCGAC
TGGTGCTTTCCGCCAGCTCGTTGGTCTCAAAGGCGCCTCGACGACCGACG
ATATCTTGAAGATCCGTCTGCAGTTGACCAAGCCCGTCACGTGGATCCCT
CTGATCTGGGGAGTCCTGTGCGGCGCAGCTGCGTCAGGCGCCTCGACGAC
CGACGATATCTTGAAGATCCGTCTGCAGTTGACCAAGCCCGTCACGTGGA
TCCCTCTGATCTGGGGAGTCCTGTGCGGCGCAGCTGCGTCAGGCAACTAC
CACTGGTGGAACCCGTTGGGAGGGGGGGACGTGAGCTTTGACCTTGGCTC
GCAGGACTTGTTGAAGGCCCTCGGCTGCATGGTGCTGTCTGGGCCTTTCC
TGACGGGCTACACCCAGGCAACTACCACTGGTGGAACCCGTTGGGAGGGG
GGGACGTGAGCTTTGACCTTGGCTCGCAGGACTTGTTGAAGGCCCTCGGC
TGCATGGTGCTGTCTGGGCCTTTCCTGACGGGCTACACCCAGACAATCAA
CGACTGGTACGACAGGGATATCGATGCCATCAACGAGCCATACCGCCCTA
TTCCGTCGGGTGCAATCTCAGAGACAATCAACGACTGGTACGACAGGGAT
ATCGATGCCATCAACGAGCCATACCGCCCTATTCCGTCGGGTGCAATCTC
AGAGAAACAAGTCATCGAGCAGATTTGGTTTTTGCTTCTCGGCGGGCTCG
CGATCGCGTACGGGCTTGACGTGTGGGCCGGCCACGACTTCCCGATGGTC
CTGGCGCTTTCCGTGGGGGGGTCGTTTATCTCGTACATCTACTCGGCGCC
GCCGATCAAGCTGAAACAGAACGGCTGGTTGGGTAACTACGCTCTCGGGT
CGTCCTACATCTCGCTGCCATGGTGGTGCGGCCAGGCCATGTTCGGGGAG
CTCAACGTCCAGAAACAAGTCATCGAGCAGATTTGGTTTTTGCTTCTCGG
CGGGCTCGCGATCGCGTACGGGCTTGACGTGTGGGCCGGCCACGACTTCC
CGATGGTCCTGGCGCTTTCCGTGGGGGGGTCGTTTATCTCGTACATCTAC
TCGGCGCCGCCGATCAAGCTGAAACAGAACGGCTGGTTGGGTAACTACGC
TCTCGGGTCGTCCTACATCTCGCTGCCATGGTGGTGCGGCCAGGCCATGT
TCGGGGAGCTCAACGTCCAGGTGGTTATCCTCACCCTTTTGTACTCGTGG
GCTGGACTGGGGATCGCGATCGTGAACGACTTCAAGAGCGTGGAGGGCGA
CAGGGAAATGGGCCTCCAGTCTCTCCCCGTGGCGTTCGGGGTGGAGAAGG
CGAAGTGGATATGCGTGGCCTCGATCGATGCCACGCAGCTGGGCATCGCT
GCCTGGCTGTACTCTATCGGGGAGCCAACCTACGCGGCCGTTTTGACGGC
GTTCGTTTTACCGCAGATTTTCGCGCAGTTCAAGTACTTCCTGCCGGACC
CCGTGGGGAATGACGTCAAGTGGTTATCCTCACCCTTTTGTACTCGTGGG
CTGGACTGGGGATCGCGATCGTGAACGACTTCAAGAGCGTGGAGGGCGAC
AGGGAAATGGGCCTCCAGTCTCTCCCCGTGGCGTTCGGGGTGGAGAAGGC
GAAGTGGATATGCGTGGCCTCGATCGATGCCACGCAGCTGGGCATCGCTG
CCTGGCTGTACTCTATCGGGGAGCCAACCTACGCGGCCGTTTTGACGGCG
TTCGTTTTACCGCAGATTTTCGCGCAGTTCAAGTACTTCCTGCCGGACCC
CGTGGGGAATGACGTCAAGTACCAGGCGACGGCGCAGCCCTTCCTAGTTT
TCGGCATTCTTACCACGGCTTTGGCTGTGGGGCACCACACCTTCTAGGTA
CCAGGCGACGGCGCAGCCCTTCCTAGTTTTCGGCATTCTTACCACGGCTT
TGGCTGTGGGGCACCACACCTTCTAG
back to top