mRNA_L-elsbetiae_contig11041.941.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11041.941.1
Unique NamemRNA_L-elsbetiae_contig11041.941.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig11041.941.1 vs. uniprot
Match: D7FZ01_ECTSI (Diacylglycerol kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ01_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 6.910e-38
Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = 1 
Query:   28 NQVWYARKGFPAAGGVPCGSRPPPPPVSQYLELRVKRSPDGDWEMLELDSTLRGVVVLNLQSYGGGRNLWGSAE 249
            NQVWYARKGFPAAGG+PCGS+PPPPPVS+YLELRVK +P  DWE LELD+TLRGVVVLNLQSYGGGRNLWG+A+
Sbjct:  652 NQVWYARKGFPAAGGIPCGSQPPPPPVSKYLELRVKSTPSSDWETLELDNTLRGVVVLNLQSYGGGRNLWGTAQ 725
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BLAST of mRNA_L-elsbetiae_contig11041.941.1 vs. uniprot
Match: A0A6H5K6M6_9PHAE (Diacylglycerol kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M6_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.510e-30
Identity = 64/120 (53.33%), Postives = 70/120 (58.33%), Query Frame = 1 
Query:   28 NQVWYARKGFPAAGGVPCGSRPPP----------------------------------------------PPVSQYLELRVKRSPDGDWEMLELDSTLRGVVVLNLQSYGGGRNLWGSAE 249
            NQVWYARKGFPAAGG+PCGS+PPP                                              PPVS+YLELRVK +P  DWE LELDSTLRGVVVLNLQSYGGGRNLWG+A+
Sbjct:  620 NQVWYARKGFPAAGGIPCGSQPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPVSKYLELRVKSTPSSDWETLELDSTLRGVVVLNLQSYGGGRNLWGTAQ 739
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BLAST of mRNA_L-elsbetiae_contig11041.941.1 vs. uniprot
Match: A0A7S3NH12_9STRA (Diacylglycerol kinase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NH12_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 9.120e-12
Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 1 
Query:   16 AKTSNQVWYARKGFPAAGGVPCGSRPPPPPVSQYLELRVKRSPDGDWEMLELDSTLRGVVVLNLQSYGGGRNLWGSAEA 252
            ++  NQ+ YA  G  A GG  CG   PPP +   LEL +   P+G W  ++L    RG++VLNLQSY GGR+LWG   +
Sbjct:  341 SRLKNQLLYAWLGLQATGGC-CGCDGPPPELPAVLELSLC-DPNGQWTKIQLPQGCRGLIVLNLQSYAGGRDLWGHTSS 417
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BLAST of mRNA_L-elsbetiae_contig11041.941.1 vs. uniprot
Match: A0A383VUD5_TETOB (Diacylglycerol kinase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VUD5_TETOB)

HSP 1 Score: 63.9 bits (154), Expect = 5.380e-10
Identity = 29/78 (37.18%), Postives = 49/78 (62.82%), Query Frame = 1 
Query:   19 KTSNQVWYARKGFPAAGGVPCGSRPPPPPVSQYLELRVKRSPDGDWEMLELDSTLRGVVVLNLQSYGGGRNLWGSAEA 252
            + +NQ WY+   F    G  CG+ P    VS +  L+V +    +W+ L + S+++ +V++NLQSYGGGRN+WG +++
Sbjct:  282 RVANQFWYS--AFSCTSGWFCGTVPS---VSTFTGLQVLQPGSSEWQQLAIPSSIKALVLVNLQSYGGGRNIWGESKS 354
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BLAST of mRNA_L-elsbetiae_contig11041.941.1 vs. uniprot
Match: A0A7S3ZLY9_9STRA (Diacylglycerol kinase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZLY9_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 7.180e-10
Identity = 33/75 (44.00%), Postives = 44/75 (58.67%), Query Frame = 1 
Query:   16 AKTSNQVWYARKGFPAAGGVPCGSRPPPPPVSQYLELRVKRSPDGDWEMLELDSTLRGVVVLNLQSYGGGRNLWG 240
            ++  NQ+ YA  G  A GG  CG + PPP +     +  K   +  WE + L  + RG++VLNLQSY GGRNLWG
Sbjct:  334 SRAKNQLLYAWLGMKATGGC-CGCQGPPPKLIDVTTVLCKV--EDTWEEVTLPKSCRGLIVLNLQSYAGGRNLWG 405
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BLAST of mRNA_L-elsbetiae_contig11041.941.1 vs. uniprot
Match: A0A7J7PG13_9CHLO (Diacylglycerol kinase n=2 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PG13_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 7.350e-10
Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 1 
Query:   19 KTSNQVWYARKGFPAAGGVPCGSRPPPPPVSQYLELRVKRSPDGDWEMLELDSTLRGVVVLNLQSYGGGRNLWGSAEA 252
            + +NQ WY+   F    G  CG+ P    VS +  L+V +    +W+ L + + ++ +V++NLQSYGGGRN+WG +E+
Sbjct:  288 RVANQFWYS--AFSCTSGWFCGAVPS---VSNFAGLQVLQPGSSEWQQLAIPAGIKALVLVNLQSYGGGRNIWGESES 360
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BLAST of mRNA_L-elsbetiae_contig11041.941.1 vs. uniprot
Match: A0A5J4Y5N1_9CHLO (Diacylglycerol kinase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y5N1_9CHLO)

HSP 1 Score: 62.8 bits (151), Expect = 1.380e-9
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 1 
Query:    1 PRPAVAKTSNQVWYARKGFPAAGGVPCGSRPPPPPVSQYLELRVKRSPDGDWEMLELDSTLRGVVVLNLQSYGGGRNLWGSAE 249
            P  A ++  NQ WYA   F  A G  C +    PP++    L+VK   DG W+ + + S+++ +V+LNLQSYGGGR++WG A+
Sbjct:  285 PWAAPSRLINQAWYAY--FSCASGWFCCA----PPLNTTATLKVKGL-DGTWQSVRIPSSVKAIVLLNLQSYGGGRDIWGLAD 360
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BLAST of mRNA_L-elsbetiae_contig11041.941.1 vs. uniprot
Match: F0Y1D7_AURAN (Diacylglycerol kinase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1D7_AURAN)

HSP 1 Score: 62.4 bits (150), Expect = 1.780e-9
Identity = 30/71 (42.25%), Postives = 43/71 (60.56%), Query Frame = 1 
Query:   28 NQVWYARKGFPAAGGVPCGSRPPPPPVSQYLELRVKRSPDGDWEMLELDSTLRGVVVLNLQSYGGGRNLWG 240
            NQ  YA  G  A GG+ CG + PPP +++  +L  +   +  W  + +    RG++VLNLQSY GGR+LWG
Sbjct:  226 NQALYAWLGACATGGL-CGCKGPPPKLAEVSKLLARVDGENGWREVPVPGGCRGLIVLNLQSYAGGRDLWG 295
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BLAST of mRNA_L-elsbetiae_contig11041.941.1 vs. uniprot
Match: A0A1D2AB79_AUXPR (Diacylglycerol kinase n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2AB79_AUXPR)

HSP 1 Score: 57.8 bits (138), Expect = 7.810e-8
Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 1 
Query:    4 RPAVAKTS--NQVWYARKGFPAAGGVPCGSRPPPPPVSQYLELRVKRSPDGD-WEMLELDSTLRGVVVLNLQSYGGGRNLWGSAE 249
            RP  A+T   NQ WY    +    G  C +    PP+   + LR +  P G  W  + L +++R +VVLNLQSYGGGR++WG ++
Sbjct:  299 RPWAAQTRVMNQAWYG--WYSCTSGWFCAA----PPLRNSVRLRGRGGPGGPAWRDIPLPASVRAIVVLNLQSYGGGRDIWGLSD 377
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BLAST of mRNA_L-elsbetiae_contig11041.941.1 vs. uniprot
Match: A0A087SAN3_AUXPR (Diacylglycerol kinase n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SAN3_AUXPR)

HSP 1 Score: 57.8 bits (138), Expect = 7.960e-8
Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 1 
Query:    4 RPAVAKTS--NQVWYARKGFPAAGGVPCGSRPPPPPVSQYLELRVKRSPDGD-WEMLELDSTLRGVVVLNLQSYGGGRNLWGSAE 249
            RP  A+T   NQ WY    +    G  C +    PP+   + LR +  P G  W  + L +++R +VVLNLQSYGGGR++WG ++
Sbjct:  299 RPWAAQTRVMNQAWYG--WYSCTSGWFCAA----PPLRNSVRLRGRGGPGGPAWRDIPLPASVRAIVVLNLQSYGGGRDIWGLSD 377
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11041.941.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ01_ECTSI6.910e-3885.14Diacylglycerol kinase n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5K6M6_9PHAE1.510e-3053.33Diacylglycerol kinase n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A7S3NH12_9STRA9.120e-1244.30Diacylglycerol kinase n=1 Tax=Aureoumbra lagunensi... [more]
A0A383VUD5_TETOB5.380e-1037.18Diacylglycerol kinase n=1 Tax=Tetradesmus obliquus... [more]
A0A7S3ZLY9_9STRA7.180e-1044.00Diacylglycerol kinase n=1 Tax=Pelagomonas calceola... [more]
A0A7J7PG13_9CHLO7.350e-1037.18Diacylglycerol kinase n=2 Tax=Scenedesmus sp. NREL... [more]
A0A5J4Y5N1_9CHLO1.380e-940.96Diacylglycerol kinase n=1 Tax=Trebouxia sp. A1-2 T... [more]
F0Y1D7_AURAN1.780e-942.25Diacylglycerol kinase n=1 Tax=Aureococcus anophage... [more]
A0A1D2AB79_AUXPR7.810e-838.82Diacylglycerol kinase n=2 Tax=Auxenochlorella prot... [more]
A0A087SAN3_AUXPR7.960e-838.82Diacylglycerol kinase n=2 Tax=Auxenochlorella prot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11041contigL-elsbetiae_contig11041:190..1268 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score144.1
Seed ortholog evalue3.1e-32
Seed eggNOG ortholog2880.D7FZ01
Preferred nameDGK1
KEGG rclassRC00002,RC00017
KEGG koko:K00411,ko:K00901
KEGG ReactionR02240
KEGG Pathwayko00190,ko00561,ko00564,ko01100,ko01110,ko02020,ko04070,ko04072,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,ko05231,map00190,map00561,map00564,map01100,map01110,map02020,map04070,map04072,map04260,map04714,map04932,map05010,map05012,map05016,map05231
KEGG ModuleM00151,M00152
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001775,GO:0003674,GO:0003824,GO:0004143,GO:0004672,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005886,GO:0005911,GO:0006464,GO:0006468,GO:0006629,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0007165,GO:0007186,GO:0007205,GO:0007275,GO:0007596,GO:0007599,GO:0007610,GO:0007635,GO:0008144,GO:0008150,GO:0008152,GO:0008289,GO:0009266,GO:0009506,GO:0009507,GO:0009536,GO:0009605,GO:0009611,GO:0009628,GO:0009653,GO:0009987,GO:0010646,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019538,GO:0019992,GO:0022622,GO:0023051,GO:0023052,GO:0030054,GO:0030168,GO:0030258,GO:0030425,GO:0030554,GO:0031974,GO:0031981,GO:0032101,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0036477,GO:0040011,GO:0040012,GO:0042048,GO:0042060,GO:0042221,GO:0042330,GO:0042995,GO:0043005,GO:0043052,GO:0043167,GO:0043168,GO:0043170,GO:0043197,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044255,GO:0044260,GO:0044267,GO:0044309,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0046777,GO:0046834,GO:0048167,GO:0048168,GO:0048169,GO:0048364,GO:0048366,GO:0048367,GO:0048583,GO:0048731,GO:0048827,GO:0048856,GO:0050789,GO:0050794,GO:0050804,GO:0050817,GO:0050878,GO:0050896,GO:0050920,GO:0050926,GO:0051716,GO:0055044,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097447,GO:0097458,GO:0098794,GO:0099177,GO:0099402,GO:0120025,GO:0120038,GO:0140096,GO:1901265,GO:1901363,GO:1901564
EggNOG free text desc.protein kinase C-activating G-protein coupled receptor signaling pathway
EggNOG OGsKOG1169@1,KOG1169@2759
EC1.10.2.2,2.7.1.107
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons2
Model size252
Cds size252
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815319.8984804-CDS-L-elsbetiae_contig11041:189..4091622815319.8984804-CDS-L-elsbetiae_contig11041:189..409Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11041 190..409 +
1691682836.4306457-CDS-L-elsbetiae_contig11041:189..4091691682836.4306457-CDS-L-elsbetiae_contig11041:189..409Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11041 190..409 +
1622815319.9111164-CDS-L-elsbetiae_contig11041:1236..12681622815319.9111164-CDS-L-elsbetiae_contig11041:1236..1268Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11041 1237..1268 +
1691682836.441902-CDS-L-elsbetiae_contig11041:1236..12681691682836.441902-CDS-L-elsbetiae_contig11041:1236..1268Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11041 1237..1268 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11041.941.1prot_L-elsbetiae_contig11041.941.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11041 190..1268 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11041.941.1

>prot_L-elsbetiae_contig11041.941.1 ID=prot_L-elsbetiae_contig11041.941.1|Name=mRNA_L-elsbetiae_contig11041.941.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=84bp
PRPAVAKTSNQVWYARKGFPAAGGVPCGSRPPPPPVSQYLELRVKRSPDG
DWEMLELDSTLRGVVVLNLQSYGGGRNLWGSAEA
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mRNA from alignment at L-elsbetiae_contig11041:190..1268+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11041.941.1 ID=mRNA_L-elsbetiae_contig11041.941.1|Name=mRNA_L-elsbetiae_contig11041.941.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1079bp|location=Sequence derived from alignment at L-elsbetiae_contig11041:190..1268+ (Laminarionema elsbetiae ELsaHSoW15)
CCCCGGCCGGCGGTCGCGAAAACCAGCAACCAGGTGTGGTACGCGCGGAA
GGGGTTTCCGGCGGCAGGAGGCGTTCCGTGCGGGTCGCGGCCTCCGCCCC
CGCCAGTGTCTCAGTACCTCGAGCTCCGGGTGAAGCGCTCCCCGGACGGC
GACTGGGAAATGCTGGAGCTGGACAGCACGCTGAGAGGAGTTGTTGTGCT
GAACCTGCAGAGCTACGGAGGTGTGTGTGTGTGTCTGTGTGTGTGTGTGC
ACGGTGGGTGTGGAGGCTACTGGTATGTACCAGGTAGTGTACATACATAC
ACAGTATTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTATCTCC
ACGTTGAAAACCGTCCCGATCTCTCTATTCAGTACCCCCATGAGTCCGTG
TACCAATCCAACACTGATGCGGTCGATTCCCGTGGTCACAGGATAGTGGG
TGGAGCTTTTTTTGTTAGGAGGGGCGTGTTCTTGCGGGGGATAGGTGTTT
TGGGTCCGTCGCTGAATGACGCGGAGCCCCCTCTGCGCCTTGTTCGCCCC
CCACACTGATCTCAGCGTAGAGAGACCCGCTTTTGGTGAAAGTTGCGGCT
TATTTCGCGTGTTGCTGCCCCTTGAGTGGTGTCTCAAATCCAGTTGGCGT
TTTGTGGTTTGGTCAGAGGTGCAGGCATCTTTTAGTGTTCTCGTGTGTAG
TAGGTCTCCCACGCGTTATTTAGCCCCATCGATCTCTTTAACCCGCGATG
ACGCCAAGCTTCCGTCCGCCACGCCGTTCCGTTTCGCCTTCCACGCGAGA
CTGTTCGGCGCAGCCAATTGGACGCATTCTCGAAGTCTCATCGAGAACGG
CCAAGAGAATGAAAGAAACACAGTAGTGAGGGAACACCAGGAGGGAGAAA
CACAGTAAATTGTCATGAGGCACGCTCACCCCCCTTAACCGCCTGAGCTT
TCTGGTCCTACATATAACCTAACATTTTTGGTGTTGGGACCGTTGTCGTT
GTTGTGGTTTGGCGCTGCTGTTGTTGCCTTTCTGCTTCGGTTATCAGGCG
GGCGGAATCTATGGGGAAGCGCAGAGGCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11041:190..1268+

>mRNA_L-elsbetiae_contig11041.941.1 ID=mRNA_L-elsbetiae_contig11041.941.1|Name=mRNA_L-elsbetiae_contig11041.941.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=504bp|location=Sequence derived from alignment at L-elsbetiae_contig11041:190..1268+ (Laminarionema elsbetiae ELsaHSoW15)
CCCCGGCCGGCGGTCGCGAAAACCAGCAACCAGGTGTGGTACGCGCGGAA
GGGGTTTCCGGCGGCAGGAGGCGTTCCGTGCGGGTCGCGGCCTCCGCCCC
CGCCAGTGTCTCAGTACCTCGAGCTCCGGGTGAAGCGCTCCCCGGACGGC
GACTGGGAAATGCTGGAGCTGGACAGCACGCTGAGAGGAGTTGTTGTGCT
GAACCTGCAGAGCTACGGAGCCCCGGCCGGCGGTCGCGAAAACCAGCAAC
CAGGTGTGGTACGCGCGGAAGGGGTTTCCGGCGGCAGGAGGCGTTCCGTG
CGGGTCGCGGCCTCCGCCCCCGCCAGTGTCTCAGTACCTCGAGCTCCGGG
TGAAGCGCTCCCCGGACGGCGACTGGGAAATGCTGGAGCTGGACAGCACG
CTGAGAGGAGTTGTTGTGCTGAACCTGCAGAGCTACGGAGGCGGGCGGAA
TCTATGGGGAAGCGCAGAGGCGGCGGGCGGAATCTATGGGGAAGCGCAGA
GGCG
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