mRNA_L-elsbetiae_contig1104.938.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1104.938.1 vs. uniprot
Match: D8LB36_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB36_ECTSI) HSP 1 Score: 140 bits (352), Expect = 3.270e-34 Identity = 100/235 (42.55%), Postives = 124/235 (52.77%), Query Frame = 1 Query: 538 NPWGGDVVPLEAAAYSGRLEVARELI*QFGIEGCGDASGGVTALKAAAQNQHVGIMGML-TSAGVVDTGEALFFAAYFGQEPSVKFLLQQXXXXXXXXXXKTSGQGAGYLDSLDPLSGATPLVCSIRASRSCSPRIARLLVDAGADTATAVRLQKKGVW*FSTARSWPSRDCT*VTRRSK----ERTLQRASSTVWRLPGGC**GWKPFMRCLGCGQATSAPSPTLLQNVREGLP 1227 N G VPL A G + REL I+GCG S GV AL AA+++HV IM +L T AGVVDTG AL AA++G SV+ LLQ+ +T+ + Y+++ L GATPL+ SI+A R CS RIARLLVDAGADT + V + V F P RR K E + +S WR C WK F+R LGCG AT PS TLLQ + P Sbjct: 107 NTSGNLFVPLNMLATRGDSDAVRELFRHVDIDGCGGPSRGVNALVTAARDKHVDIMVLLLTDAGVVDTGGALITAAHYGGVVSVEHLLQRQK--------QTAAERKAYVNA-PGLFGATPLLWSIQACRPCSSRIARLLVDAGADTTSTVTMAD--VQGFGLMAYTPKEIAIRRIRRKKVEGKEDIVATSSCAAWRPSAACCCKWKQFVRSLGCGLATIPPSLTLLQRAQAEPP 330
BLAST of mRNA_L-elsbetiae_contig1104.938.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 134 bits (336), Expect = 2.710e-31 Identity = 86/179 (48.04%), Postives = 104/179 (58.10%), Query Frame = 1 Query: 541 PWGGDVVPLEAAAYSGRLEVARELI*QFGIEGCGDASGGVTALKAAAQNQHVGIMGMLTSAGVVDTGEALFFAAYFGQEPSVKFLLQQXXXXXXXXXXKTSGQGAGYLDS-LDPLSGATPLVCSIRASRSCSPRIARLLVDAGADTATAVRLQKKGVW*FSTARSWPSRDCT*VTRRSK 1074 P G VPL+ A G EV REL Q G+ GCG SGGV +L+ A Q V IMG+LT GVVDTG AL AA +E SVKFLLQ +G GA Y+++ LDP G TPLVC+I A S SPRIAR L+DA ADT + V + K G W +T+R P T R++K Sbjct: 166 PSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQ-----------AGGGAWYVNNTLDPF-GRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQW--TTSRDTPLGFATHSLRQNK 330
BLAST of mRNA_L-elsbetiae_contig1104.938.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 127 bits (320), Expect = 4.600e-29 Identity = 80/162 (49.38%), Postives = 96/162 (59.26%), Query Frame = 1 Query: 520 PALDYSNPWGGDVVPLEAAAYSGRLEVARELI*QFGIEGCGDASGGVTALKAAAQNQHVGIMGMLTSAGVVDTGEALFFAAYFGQEPSVKFLLQQXXXXXXXXXXKTSGQGAGYLDSLDPLSGATPLVCSI---RASRSCSPRIARLLVDAGADTATAVRLQ 996 P L P G VPL+ AA G+ EV RELI Q I+GCG ASGGV AL+ AA +Q+V +M +L AGV+DTGEAL AA E VK LLQQ G+ Y++ L G TPL+CSI A CSPR+ RLLVDAGADT +AV L+ Sbjct: 176 PLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGT------SAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLK 331
BLAST of mRNA_L-elsbetiae_contig1104.938.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 126 bits (317), Expect = 1.650e-28 Identity = 79/164 (48.17%), Postives = 99/164 (60.37%), Query Frame = 1 Query: 586 GRLEVARELI*QFGIEGCGDASGGVTALKAAAQNQHVGIMGMLTSAGVVDTGEALFFAAYFGQEPSVKFLLQQXXXXXXXXXXKTSGQGAGYLDS-LDPLSGATPLVCSIRASRSCSPRIARLLVDAGADTATAVRLQKKGVW*FSTARSWPSRDCT*VTRRSK 1074 G EV RELI Q G+ GCG S GV +L+ AA Q+V IMG+LT GVVDTG AL AA + +E SVKFLLQ +G G Y+++ LDP G TPLVC+I A S SPRIAR L+D GADT + V + + G W +T+R P T R++K Sbjct: 191 GHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQ-----------AGGGTWYVNNTLDPF-GRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEW--TTSRDTPLGFATRSLRQNK 340
BLAST of mRNA_L-elsbetiae_contig1104.938.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 122 bits (305), Expect = 7.630e-27 Identity = 71/146 (48.63%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 559 VPLEAAAYSGRLEVARELI*QFGIEGCGDASGGVTALKAAAQNQHVGIMGMLTSAGVVDTGEALFFAAYFGQEPSVKFLLQQXXXXXXXXXXKTSGQGAGYLDSLDPLSGATPLVCSIRA--SRSCSPRIARLLVDAGADTATAVR 990 +PL+ AA +GRL V EL+ +FGI GCG +GGVTAL+ AA H+ +M LT+AGVVDTG AL A FG VKFLLQQ T + + Y+ G TPL+C+I ++SCSP++ RLLVDAGADT + VR Sbjct: 185 LPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNG--------TPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVR 322
BLAST of mRNA_L-elsbetiae_contig1104.938.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 119 bits (299), Expect = 1.110e-25 Identity = 75/158 (47.47%), Postives = 94/158 (59.49%), Query Frame = 1 Query: 526 LDYSNPWGGDVVPLEAAAYSGRLEVARELI*QFGIEGCGDASGGVTALKAAAQNQHVGIMGMLTSAGVVDTGEALFFAAYFGQEPSVKFLLQQXXXXXXXXXXKTSGQGA--GYLDSLDPLSGATPLVCSIRASRSCSPRIARLLVDAGADTATAVRL 993 + S P VPL+ AA G +V RELI + GIEGC S G AL AA NQH+ IM +LT AGVVDTG+AL+ AA G E SVKFLL+ K G G YL++ D ++G TPLV + S +PRI R+LVDAGADT + V++ Sbjct: 269 IQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRH--------KEGGCGVEGAYLNARD-VNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQV 417
BLAST of mRNA_L-elsbetiae_contig1104.938.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 118 bits (295), Expect = 1.450e-25 Identity = 79/202 (39.11%), Postives = 105/202 (51.98%), Query Frame = 1 Query: 520 PALDYSNPWGGDVVPLEAAAYSGRLEVARELI*QFGIEGCGDASGGVTALKAAAQNQHVGIMGMLTSAGVVDTGEALFFAAYFGQEPSVKFLLQQXXXXXXXXXXKTSGQGAG---YLDSLDPLSGATPLVCSIRASRSCSPRIARLLVDAGADTATAVRLQKKGVW*FSTARSWPSRDCT*VTRRSKERTLQRASSTVWRL 1116 P L G VPL+ AA +G L VAREL+ +FGI GC AS GV AL AA +QH+ +M +L AGVVDTG AL + G+E ++KFLL+Q G+G Y + G TPL+ ++ CSPR+ RLLVDAGAD AVR+ F + + DC TR E+ + +T +L Sbjct: 170 PLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQ------------KGEGTARTTYASTPRDGRGHTPLLSAVTTG-PCSPRVVRLLVDAGADATLAVRVPDG----FGRSTKYTPLDC--ATRCLAEKVVDEDFATAQQL 352
BLAST of mRNA_L-elsbetiae_contig1104.938.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 114 bits (284), Expect = 4.890e-24 Identity = 72/159 (45.28%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 520 PALDYSNPWGGDVVPLEAAAYSGRLEVARELI*QFGIEGCGDASGGVTALKAAAQNQHVGIMGMLTSAG-VVDTGEALFFAAYFGQEPSVKFLLQQXXXXXXXXXXKTSGQGAGYLDSLDPLSGATPLVCSIR--ASRSCSPRIARLLVDAGADTATAV 987 P L P G VPLE AA G +VARE+I Q GI GCG SGGV AL+ AA +H+ M +L AG VVDTG AL AA G+ +VKFLL+ + Y++ G TP++C++ A R CSP+I RLLVDAGA+T AV Sbjct: 171 PLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLR-----------RRQADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAV 318
BLAST of mRNA_L-elsbetiae_contig1104.938.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 110 bits (275), Expect = 6.930e-23 Identity = 81/194 (41.75%), Postives = 107/194 (55.15%), Query Frame = 1 Query: 556 VVPLEAAAYSGRLEVARELI*QFGIEGCGDASGGVTALKAAAQNQHVGIMGMLTSAGVVDTGEALFFAAYFGQEPSVKFLLQQXXXXXXXXXXKTSGQGAGYLDSLDPLSGATPLVCSIRA----SRSCSPRIARLLVDAGADTATAVR-LQKKGVW*FSTARSWPSRDCT*VTRRSKERTLQRASSTVWRLPG 1122 ++PL++AA +G L V RELI + GIEGCG S G AL A + + V M +LT AGVVDTG+AL +A G+E SVK+LLQ K G GA Y++ D +G TPL+ SI +S PR+ARLLV+AGADT T +R GV FS P + + + K + +WRL G Sbjct: 170 LLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHA--------KHYGPGA-YVNVRDR-NGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCT---PLKLTVHILQDKKVDGTYISKQRLWRLEG 350
BLAST of mRNA_L-elsbetiae_contig1104.938.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE) HSP 1 Score: 108 bits (269), Expect = 1.500e-21 Identity = 71/156 (45.51%), Postives = 87/156 (55.77%), Query Frame = 1 Query: 556 VVPLEAAAYSGRLEVARELI*QFGIEGCGDASGGVTALKAAAQNQHVGIMGMLTSAGVVDTGEALFFAAYFGQEPSVKFLLQQXXXXXXXXXXKTSGQGAGYLDSLDPLSGATPLVCSI-RASRSCSPRIARLLVDAGADTATAVRL-QKKGVW*F 1017 ++PL+AA S V R+LI Q GI+GCG AS G A + A Q Q I+ ML G +DTG L AA FG E VK LLQQ Y++ P G TP+VC I RA RS SPR+ RL +DAGADTA+ VR+ K+GV F Sbjct: 347 ILPLDAAVISKHAAVVRKLIQQLGIQGCGGASAGADASRWAVQTQQYDIVVMLADTGEIDTGRVLIDAAKFGSEALVKILLQQQRGKHMDWDT--------YVNKKQP-DGRTPVVCRIGRALRSGSPRVLRLFLDAGADTASTVRITNKEGVQLF 493 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1104.938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1104.938.1 >prot_L-elsbetiae_contig1104.938.1 ID=prot_L-elsbetiae_contig1104.938.1|Name=mRNA_L-elsbetiae_contig1104.938.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=104bp MGMLTSAGVVDTGEALFFAAYFGQEPSVKFLLQQQQQQQQQQQRKTSGQGback to top mRNA from alignment at L-elsbetiae_contig1104:22198..23516- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1104.938.1 ID=mRNA_L-elsbetiae_contig1104.938.1|Name=mRNA_L-elsbetiae_contig1104.938.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1319bp|location=Sequence derived from alignment at L-elsbetiae_contig1104:22198..23516- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1104:22198..23516- >mRNA_L-elsbetiae_contig1104.938.1 ID=mRNA_L-elsbetiae_contig1104.938.1|Name=mRNA_L-elsbetiae_contig1104.938.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=624bp|location=Sequence derived from alignment at L-elsbetiae_contig1104:22198..23516- (Laminarionema elsbetiae ELsaHSoW15)back to top |