mRNA_L-elsbetiae_contig11021.924.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11021.924.1
Unique NamemRNA_L-elsbetiae_contig11021.924.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11021.924.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11021contigL-elsbetiae_contig11021:3370..5337 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size228
Cds size228
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815318.3320003-CDS-L-elsbetiae_contig11021:3369..35441622815318.3320003-CDS-L-elsbetiae_contig11021:3369..3544Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11021 3370..3544 -
1691682835.5305974-CDS-L-elsbetiae_contig11021:3369..35441691682835.5305974-CDS-L-elsbetiae_contig11021:3369..3544Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11021 3370..3544 -
1622815318.3446882-CDS-L-elsbetiae_contig11021:5284..53371622815318.3446882-CDS-L-elsbetiae_contig11021:5284..5337Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11021 5285..5337 -
1691682835.5395615-CDS-L-elsbetiae_contig11021:5284..53371691682835.5395615-CDS-L-elsbetiae_contig11021:5284..5337Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11021 5285..5337 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11021.924.1prot_L-elsbetiae_contig11021.924.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11021 3370..5337 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11021.924.1

>prot_L-elsbetiae_contig11021.924.1 ID=prot_L-elsbetiae_contig11021.924.1|Name=mRNA_L-elsbetiae_contig11021.924.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=76bp
LLGLCATCLRPLEGERRRKQERVAICLRRELPCYTATLHLHSPSAPSERT
GPGGAGHGMRSILEPVSTAVVPNGPH
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mRNA from alignment at L-elsbetiae_contig11021:3370..5337-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11021.924.1 ID=mRNA_L-elsbetiae_contig11021.924.1|Name=mRNA_L-elsbetiae_contig11021.924.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1968bp|location=Sequence derived from alignment at L-elsbetiae_contig11021:3370..5337- (Laminarionema elsbetiae ELsaHSoW15)
CTGCTAGGTTTGTGCGCTACTTGCCTGCGGCCGCTGGAGGGGGAGAGACG
AAGGTGATTTGAGCGTATAGTTTTTGTGGCGACCTTGCCGTGATCGTCGA
TGTCGTCTGAACCCAACAACTTGTGTGCGTGCCACAGCTTGGATCATCAC
AAGTCGTGCCCATGCTTTGGCGTTCGCAGTCCATGTGGTCTAGATAATGC
ATCACAGCGGTTTGTTGTTGCGTGCTGATGAAGCATGAGCAGCAGAGGGT
GGGAATATTGAGAATGATGCTCCCAAAGCAGCGGTTGTTTTTAGCAGGAC
TACTGCCGTTTGTAGTCTACTGGTCGCTGCTCACGTGCTCACCCACACCG
CACCACCGCACAGGTTTGTATCCGAGAAGATTTGGTGTTGTAACCGTCGT
GGTGCTCCATCACTTCCGCCACGTGACATGATGAGTGTTGTGCATCTGGC
ATTTTTGGTGGCGGTCAGCCTCACGCACCCTAGATACTTGCCATTTCAAG
AGAGAGAACAAGAATTGAATATTTGGTTCGCGTGTGACGTAGATGAATTC
CCCGAGCAGTAACTTCAACCACGCGCGCGCACTGTGCGGGTGCTGTTGTA
GGTGCTAGAATACGCGCTATTTGGAACAGCGTACCCGCGCAAGAGTTCTT
GTTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTTT
CGCACTACCGTAGTATCCGTGTATCCGTGTATTGATACACACAGGAGGCT
GCGTTTCCTCTCCGTTTGTGTGCGATGAAAAGTTTGTGCTCTGTTCGCGT
ATGTACCGGTATAGGAGTACCACTATCTAGAGGAGACTTGTTGGTGAGTT
TGTTGTTTTCATCACATTAGACAGCTCGTTATCGAGACTGCTAATTCCCA
AAAATCTAGCGACTCACGGCCCGTGGTCACAGAAGTGCTAGAGCCATCAG
AAGATCCGAAAAGGACATACGTGTGTGTAGGGGGCGGTTTTTAAGATACA
TCTAGATATTCGAATTTTGCCAGGTCTACTTCTTGAATTAAAGGCAAGTC
TGCGGAGAGTTGTGAACGTGTGTGGTTCGTAGTGAAAGAAGTCAGTGCCG
CAAATGTATGTATCTGATTCTTCCACAACCCTGGTTCTTGTCACTTTGCT
CATGATTCATGGGTATATTTGTAGCCGTCGCCGGTCGCTGGTCTGGGTGG
GTCGGGCATGCGGCGGGATTTCATGTGCTGGTGTCCAGAGCAAGAAAGCA
CCCTTTGGACTTGGTTCTTCTCCCCACCCACACTTGTATGTTCGTCGCAT
GCATGCATGCATCGCAGTTTGTGTCTACTTGGCTACTTTAATGGCTCGCT
ACATACCGCGGTTGGTGATGTTGGCTTTTCCACTACTGTTGTTTTCACCT
CAAGAAGCGTGTAGAGGAGAGCGGAGGGCTCCAGACTATCTGATGTGTCT
GATCTTTTGTTTCTTGTGCTTTGTGGACCCTTCGGGTCCATTTTATTTCC
CTTTTTTTTTTTAAGTATACCCTTTTTAGGGTGTTATCCTGTGACCATGG
CAATCGACTGCGTCAGTGTTGGATAAGTACGGACTCACGGAGGTACTGGG
TAGAGAGATGTGTTTAAATGTGAAGGCAGGACCAACAGCAACAACAGCAA
CAACAACAACAACTGAATACTTTGCTGTCATAAACACAAGGCAACTTCAT
CTTTGCAACGACACTTGGCACGGAAGAGCCGGCCGACCCCAGCTCGCCAT
TTCCCGTCAACCGTGCCCCCCCCATAACGGCCGGACCCAGCAGAAAACAG
GAGCGAGTAGCCATCTGCCTCCGGCGGGAGCTTCCCTGTTACACAGCCAC
CCTCCACCTTCATTCACCTTCGGCACCGAGCGAGCGTACAGGACCGGGCG
GGGCAGGGCATGGCATGCGGTCGATTTTGGAGCCTGTATCCACAGCCGTA
GTACCGAATGGGCCCCAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11021:3370..5337-

>mRNA_L-elsbetiae_contig11021.924.1 ID=mRNA_L-elsbetiae_contig11021.924.1|Name=mRNA_L-elsbetiae_contig11021.924.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=456bp|location=Sequence derived from alignment at L-elsbetiae_contig11021:3370..5337- (Laminarionema elsbetiae ELsaHSoW15)
CTGCTAGGTTTGTGCGCTACTTGCCTGCGGCCGCTGGAGGGGGAGAGACG
AAGCTGCTAGGTTTGTGCGCTACTTGCCTGCGGCCGCTGGAGGGGGAGAG
ACGAAGAAAACAGGAGCGAGTAGCCATCTGCCTCCGGCGGGAGCTTCCCT
GTTACACAGCCACCCTCCACCTTCATTCACCTTCGGCACCGAGCGAGCGT
ACAGGACCGGGCGGGGCAGGGCATGGCATGCGGTCGATTTTGGAGCCTGT
ATCCACAGCCGTAGTACCGAATGGGCCCCACAAAACAGGAGCGAGTAGCC
ATCTGCCTCCGGCGGGAGCTTCCCTGTTACACAGCCACCCTCCACCTTCA
TTCACCTTCGGCACCGAGCGAGCGTACAGGACCGGGCGGGGCAGGGCATG
GCATGCGGTCGATTTTGGAGCCTGTATCCACAGCCGTAGTACCGAATGGG
CCCCAC
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