mRNA_L-elsbetiae_contig1101.918.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1101.918.1 vs. uniprot
Match: D8LS06_ECTSI (Calponin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS06_ECTSI) HSP 1 Score: 557 bits (1436), Expect = 2.610e-187 Identity = 308/462 (66.67%), Postives = 347/462 (75.11%), Query Frame = 3 Query: 207 MSNKRGVGHASVDNPLAADTQNGTTEG--TKGNGXXXXXXXXXXGRPACLPLPSPPRLPSKRTLSDRLMDSTVSKFEAKCTVSGSGSGKASSTGRSTLGASAPMAAVLPLP-WGTGGSTVDLDARERTAQAWIEAVSGKACVAYETKQFARNLMSGEILCILVNAIRPGTIPHVHKSQLGFEQMENIDNFLSACCKLGVPAHALVDTADIFEMRDTPRVVECVHALGSAVQVSCPAFGGPYLGLAADPSLVAAVPSADXXXXXXXXXXXXXX-----------GAFGDFWRASARSRGDAPP--GGRQDGTGANGDSLVLNMQDVERPRMTRRGFTTTVGSITDLDPPATLSARARKMCPEEMVNSPRALVFNSDPIGHPTRSPTMRAAWESEGNAGG----GRSAWGTDIYPAKRTPKNPSNLSATSARSQNLSPAGLWGTGVGT-PRAGVVGKSVSPAAA 1529 MS+K+G GH V P AD + GT+ G + +G GRPACLPLPSPPRLPSKRTL+D +MDSTV++FEA C ++ G+ A S R+ L + A + P W + L+ARERTAQAWIEAVSG+ACV Y+TKQFARNLMSGEILC LVNAIRPGTIPHVH+SQLGFEQMENI++FLSACCKLGV AHALVDTAD+FEMRDT +VVECVHALGSAVQVSCP FGGP+LG AADP+LVAAVP AD XX GAFGDFWRAS R+ G+AP GG +DG A ++LVLNMQDVERPR TRRGFTTTVGSITDLDPPATLSARAR+MCP EMVNSPRALVFN+DP+GHPTRSPT+RAAWES GG GRSAWGTD YPAKR K SNLSATS+R LSPAG+WGTG GT PR G+ GKS SPAAA Sbjct: 1 MSDKQGQGHLGVGKPSVADEKGGTSGGGVSGDDGDARASRDREDGRPACLPLPSPPRLPSKRTLTDSVMDSTVARFEASCKLTEQGTAAAPSAARTALATVSSAANTVRTPSWDKNATPAHLEARERTAQAWIEAVSGRACVEYQTKQFARNLMSGEILCALVNAIRPGTIPHVHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLGPAADPTLVAAVPPADEDEGDDGGXXDGKDNAVXXXXXXXDGAFGDFWRASVRTGGNAPREGGGGRDGDVAGDNTLVLNMQDVERPRSTRRGFTTTVGSITDLDPPATLSARARQMCPTEMVNSPRALVFNADPVGHPTRSPTLRAAWESNATNGGRAAAGRSAWGTDAYPAKRAAKATSNLSATSSRGMTLSPAGIWGTGAGTAPREGI-GKSASPAAA 461
BLAST of mRNA_L-elsbetiae_contig1101.918.1 vs. uniprot
Match: A0A6H5JBJ6_9PHAE (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ6_9PHAE) HSP 1 Score: 552 bits (1423), Expect = 3.950e-185 Identity = 316/461 (68.55%), Postives = 353/461 (76.57%), Query Frame = 3 Query: 207 MSNKRGVGHASVDNPLAADTQNGTTEG--TKGNGXXXXXXXXXXGRPACLPLPSPPRLPSKRTLSDRLMDSTVSKFEAKCTVSGSGSGKASSTGRSTLGA--SAPMAAVLPLPWGTGGSTVDLDARERTAQAWIEAVSGKACVAYETKQFARNLMSGEILCILVNAIRPGTIPHVHKSQLGFEQMENIDNFLSACCKLGVPAHALVDTADIFEMRDTPRVVECVHALGSAVQVSCPAFGGPYLGLAADPSLVAAVPSADXXXXXXXXXXXXXX---------GAFGDFWRASARSRGDAPP--GGRQDGTGANGDSLVLNMQDVERPRMTRRGFTTTVGSITDLDPPATLSARARKMCPEEMVNSPRALVFNSDPIGHPTRSPTMRAAWESEGNAGG----GRSAWGTDIYPAKRTPKNPSNLSATSARSQNLSPAGLWGTGVGT-PRAGVVGKSVSPAAA 1529 M +K+G GH V+ P AD + GT+ G + +G G+PACLPLPSPPRLPSKRTL+D +MDSTVS+F+A C +S G+ A S R+ L + SAP P W S DL+ARERTAQAWIEAVSG+ACVAY+TKQFARN+MSGEILC LVNAIRPGTIP VH+SQLGFEQMENI++FLSACCKLGV AHALVDTAD+FEMRDT +VVECVHALGSAVQVSCP FGGP+LG AADPSLVA VP AD XXXXXXXXXX GAFGDFWRAS + G+AP GG DG A+ + LVLNMQDVERPR TRRGFTTTVGSITDLDPPATLSARAR+MCP EMVNSPRALVFN+DP+GHP RSPT+RAAWES GG GRSAWGTD YPAKRT K SNLSATS+R LSPAG+WGTG G PR G+ GKS SPAAA Sbjct: 1 MPDKQGQGHLGVERPSVADEKGGTSGGGVSGDDGDSRGSGDREDGKPACLPLPSPPRLPSKRTLTDSVMDSTVSRFKASCKLSDQGTAAAPSAARTALASVSSAPNTVRTP-SWDKNASPADLEARERTAQAWIEAVSGRACVAYQTKQFARNIMSGEILCALVNAIRPGTIPRVHESQLGFEQMENINSFLSACCKLGVQAHALVDTADVFEMRDTAKVVECVHALGSAVQVSCPEFGGPHLGPAADPSLVAVVPPADEDEGXXXXXXXXXXXXXXXXXXDGAFGDFWRASVGTGGNAPHEGGGGHDGDVASDNMLVLNMQDVERPRSTRRGFTTTVGSITDLDPPATLSARARQMCPTEMVNSPRALVFNADPVGHPPRSPTLRAAWESNATNGGRAAAGRSAWGTDAYPAKRTAKITSNLSATSSRGMTLSPAGIWGTGAGAVPRQGI-GKSASPAAA 459
BLAST of mRNA_L-elsbetiae_contig1101.918.1 vs. uniprot
Match: A0A7R9YD67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD67_9STRA) HSP 1 Score: 119 bits (299), Expect = 4.520e-25 Identity = 63/131 (48.09%), Postives = 88/131 (67.18%), Query Frame = 3 Query: 537 GTGGSTVDLDARERTAQAWIEAVSGKACVAYETKQFARNLMSGEILCILVNAIRPGTIPHVHKSQLGFEQMENIDNFLSACCKLGVPAHALVDTADIFEMRDTPRVVECVHALGSAVQVSCPAFGGPYLGL 929 G GS +D +A + AQ WIEAV+G A F +L G++LC+LVNAIR G++ +++S+L F+QMENI NFL AC LGV H + +T D+FE++D VV+C+ ALG AVQ + P F GP+LG+ Sbjct: 4 GGQGSFIDPEAMQ-DAQEWIEAVTGVAFAG----DFGESLKDGQMLCMLVNAIRRGSVRKINESKLPFKQMENISNFLRACRTLGVAEHDVFETVDLFELKDLSVVVKCIWALGRAVQTTVPEFEGPHLGV 129
BLAST of mRNA_L-elsbetiae_contig1101.918.1 vs. uniprot
Match: A0A7S4RVI9_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RVI9_9DINO) HSP 1 Score: 116 bits (291), Expect = 4.700e-24 Identity = 57/120 (47.50%), Postives = 81/120 (67.50%), Query Frame = 3 Query: 573 ERTAQAWIEAVSGKACVAYETKQFARNLMSGEILCILVNAIRPGTIPHVHKSQLGFEQMENIDNFLSACCKLGVPAHALVDTADIFEMRDTPRVVECVHALGSAVQVSCPAFGGPYLGLA 932 E+ W+EA++G+A E + A L +G++LC L NAIRPG + V+ SQ+ F+QMENI F++A +LGVP A+ T D++E ++ P VV C++ LG AVQVSCP F GP LG+A Sbjct: 258 EKEVTDWVEAITGQA---RECQTLAEWLKNGQVLCALANAIRPGIVKKVNSSQMPFKQMENITFFMNAARELGVPESAIFSTPDLYEEKNIPSVVNCMYTLGGAVQVSCPGFTGPRLGVA 374
BLAST of mRNA_L-elsbetiae_contig1101.918.1 vs. uniprot
Match: A0A7S1U3T7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3T7_9STRA) HSP 1 Score: 108 bits (270), Expect = 9.750e-23 Identity = 54/115 (46.96%), Postives = 76/115 (66.09%), Query Frame = 3 Query: 582 AQAWIEAVSGKACVAYETKQFARNLMSGEILCILVNAIRPGTIPHVHKSQLGFEQMENIDNFLSACCKLGVPAHALVDTADIFEMRDTPRVVECVHALGSAVQVSCPAFGGPYLG 926 AQ WIE ++G+A F +L G +LC+ +NAI+PGTI V+ S+L F+QMEN+ FL +C LGV H L +T D++E++D VV+C+HALG AV+ S P + GP LG Sbjct: 2 AQQWIEELTGEAFPG----GFGESLKDGRLLCLTINAIKPGTIRRVNASKLPFKQMENVSTFLRSCRTLGVAEHDLFETVDLYELKDLGLVVQCIHALGRAVR-SLPGYSGPTLG 111
BLAST of mRNA_L-elsbetiae_contig1101.918.1 vs. uniprot
Match: A0A812H1J4_9DINO (Cnn3 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812H1J4_9DINO) HSP 1 Score: 107 bits (268), Expect = 1.390e-21 Identity = 59/121 (48.76%), Postives = 74/121 (61.16%), Query Frame = 3 Query: 567 ARERTAQAWIEAVSGKACVAYETKQFARNLMSGEILCILVNAIRPGTIPHVHKSQLGFEQMENIDNFLSACCKLGVPAHALVDTADIFEMRDTPRVVECVHALGSAVQVSCPAFGGPYLGL 929 A E A AWI+ V+G A V FA +L SG +LC LVN I+PGTI V+ + F++ ENI NFL AC GV +AL T D+FE ++ VV CV+ALG AVQ S P F GP G+ Sbjct: 182 AAEEQAAAWIQEVTGHAVV----NDFAGSLRSGAVLCDLVNCIQPGTIAKVNSPGMPFKERENISNFLRACRNFGVQEYALFSTDDLFEEKNLMSVVNCVYALGGAVQRSVPDFPGPVFGV 298
BLAST of mRNA_L-elsbetiae_contig1101.918.1 vs. uniprot
Match: A0A7S1PVF5_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1PVF5_ALECA) HSP 1 Score: 103 bits (258), Expect = 1.520e-21 Identity = 49/112 (43.75%), Postives = 75/112 (66.96%), Query Frame = 3 Query: 591 WIEAVSGKACVAYETKQFARNLMSGEILCILVNAIRPGTIPHVHKSQLGFEQMENIDNFLSACCKLGVPAHALVDTADIFEMRDTPRVVECVHALGSAVQVSCPAFGGPYLG 926 WIE V+G+ ++ +N G +LC L N I+PGT+ V+ S + F+QMENI F++A ++GVP ++ T D++E ++ V+ C+H+LGSAVQVSCP++GGP LG Sbjct: 53 WIEEVTGEKRGEQSAAEWLKN---GAVLCSLANKIKPGTVKKVNTSAMPFKQMENITFFMNAAREVGVPESSMFGTPDLYEEKNMGSVMSCIHSLGSAVQVSCPSYGGPKLG 161
BLAST of mRNA_L-elsbetiae_contig1101.918.1 vs. uniprot
Match: A0A813CPU7_9DINO (CNN1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CPU7_9DINO) HSP 1 Score: 100 bits (250), Expect = 1.660e-21 Identity = 56/114 (49.12%), Postives = 70/114 (61.40%), Query Frame = 3 Query: 567 ARERTAQAWIEAVSGKACVAYETKQFARNLMSGEILCILVNAIRPGTIPHVHKSQLGFEQMENIDNFLSACCKLGVPAHALVDTADIFEMRDTPRVVECVHALGSAVQVSCPAF 908 A E A AWI+AV+G + V FA L SG +LC LVN I+PGTI V+ + F++ ENI NFL AC GV +AL T D+FE ++ VV CV+ALG AVQ S P F Sbjct: 8 AAEEQAAAWIQAVTGHSVV----NDFAGCLRSGAVLCDLVNCIQPGTIAKVNSPGMPFKERENISNFLRACRNFGVQEYALFSTDDLFEEKNLMSVVNCVYALGGAVQRSVPDF 117
BLAST of mRNA_L-elsbetiae_contig1101.918.1 vs. uniprot
Match: A0A7S4V4E0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4V4E0_9DINO) HSP 1 Score: 106 bits (264), Expect = 1.170e-20 Identity = 56/120 (46.67%), Postives = 79/120 (65.83%), Query Frame = 3 Query: 567 ARERTAQAWIEAVSGKACVAYETKQFARNLMSGEILCILVNAIRPGTIPHVHKSQLGFEQMENIDNFLSACCKLGVPAHALVDTADIFEMRDTPRVVECVHALGSAVQVSCPAFGGPYLG 926 A E AWI++VSG+A ++ L SG++LC L+NAI+PG I V+ S + F+QMENI F++A +LGVP ++ D++E ++ V+ C+HALGSAVQVSCP F GP LG Sbjct: 245 ALEAEVVAWIQSVSGEAKGDESPHEW---LKSGQVLCKLINAIKPGKIAKVNTSAMPFKQMENITFFMNAARELGVPESSMFGCPDLYEEKNMGSVMNCLHALGSAVQVSCPEFTGPKLG 361
BLAST of mRNA_L-elsbetiae_contig1101.918.1 vs. uniprot
Match: A0A7S4W504_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4W504_9DINO) HSP 1 Score: 107 bits (268), Expect = 2.700e-20 Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 3 Query: 567 ARERTAQAWIEAVSGKACVAYETKQFARNLMSGEILCILVNAIRPGTIPHVHKSQLGFEQMENIDNFLSACCKLGVPAHALVDTADIFEMRDTPRVVECVHALGSAVQVSCPAFGGPYLGL 929 A E+ WIEA+SG+ ET Q L +G ILC+LVNAIRPGTI VH S+L F+QMENI F S ++GVP A+ TAD+FE ++ V+ C+ AVQV P F GP+LG+ Sbjct: 541 ALEKQVTEWIEAISGEKKGDEETIQ--EWLKNGRILCVLVNAIRPGTIKKVHSSKLAFKQMENITFFTSVAREVGVPESAMFGTADLFEGKNMGSVMTCIFMFAGAVQVHWPEFPGPHLGV 659 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1101.918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1101.918.1 >prot_L-elsbetiae_contig1101.918.1 ID=prot_L-elsbetiae_contig1101.918.1|Name=mRNA_L-elsbetiae_contig1101.918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=486bp MSNKRGVGHASVDNPLAADTQNGTTEGTKGNGENGAAGSGEDGRPACLPLback to top mRNA from alignment at L-elsbetiae_contig1101:17312..26235- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1101.918.1 ID=mRNA_L-elsbetiae_contig1101.918.1|Name=mRNA_L-elsbetiae_contig1101.918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8924bp|location=Sequence derived from alignment at L-elsbetiae_contig1101:17312..26235- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1101:17312..26235- >mRNA_L-elsbetiae_contig1101.918.1 ID=mRNA_L-elsbetiae_contig1101.918.1|Name=mRNA_L-elsbetiae_contig1101.918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2916bp|location=Sequence derived from alignment at L-elsbetiae_contig1101:17312..26235- (Laminarionema elsbetiae ELsaHSoW15)back to top |