mRNA_L-elsbetiae_contig11009.914.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11009.914.1
Unique NamemRNA_L-elsbetiae_contig11009.914.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: A0A6H5L7C8_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7C8_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 1.110e-109
Identity = 192/282 (68.09%), Postives = 205/282 (72.70%), Query Frame = 3
Query:    6 GANRRGASRCRGYSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGG-------------------GGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKRALLPFPDLLPAGRFVHYIKTHTIRSCCTKHWLYTPVWAKPADFSGIVVSKRMFFDHIPTKSCPRFMETFDMLRKEGRQANEAVAAG 794
            G +RR   R R YSLRVTGHSLGGSTGALL YMLR ++P+ RC+A+SPLGGLLNSPHAE CGEFVLS+ALGEDVVPRLSV+AMERMRDE+LELIARTK NKLTVMRSMVRAVS     G S                          GGD G              GLVY Q E VPETRFS QLRRYRALVDQKRA  PFP+LLPAGRFVHYIKTHT RSCC +HWLYTPVWAKP DF  IVVSKRMFFDHIPTKS PRF ET+ ML KE R   EAVA+G
Sbjct:  560 GGDRRTPPRFRDYSLRVTGHSLGGSTGALLAYMLRWEYPSVRCLAVSPLGGLLNSPHAENCGEFVLSSALGEDVVPRLSVLAMERMRDEVLELIARTKANKLTVMRSMVRAVSFSRGTGLSPXXXXXXXXXXXXXXXXXXXXRDLEDGGDLG--------------GLVYRQDEPVPETRFSSQLRRYRALVDQKRAASPFPELLPAGRFVHYIKTHTNRSCCIRHWLYTPVWAKPTDFRDIVVSKRMFFDHIPTKSSPRFTETYQMLLKEAR---EAVASG 824          
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: D7FZ60_ECTSI (BiP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ60_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 6.630e-60
Identity = 128/184 (69.57%), Postives = 136/184 (73.91%), Query Frame = 3
Query:    6 GANRRGASRCRGYSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGAS---RSSAAGGGG--------DSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALV 524
            G  RR   R R YSLRVTGHSLGGSTGALL YMLR ++P+ RCVAISPLGGLLNSPHAE CGEFVLS+ALGEDVVPRLSV+AMERMRDE+LELIARTK NKLTVMRSMVRAVS   + G S   RSS+ G GG        DSG              GLVY Q E VPETRFS QLRRYRALV
Sbjct:  240 GGGRRTPPRFRDYSLRVTGHSLGGSTGALLAYMLRWEYPSVRCVAISPLGGLLNSPHAENCGEFVLSSALGEDVVPRLSVLAMERMRDEVLELIARTKANKLTVMRSMVRAVSFSRDTGPSPSPRSSSTGFGGCXXXXXXXDSG----RDLEHGDDLGGLVYGQDEPVPETRFSSQLRRYRALV 419          
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: A0A6U1LQR0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LQR0_9STRA)

HSP 1 Score: 138 bits (348), Expect = 3.830e-35
Identity = 85/238 (35.71%), Postives = 119/238 (50.00%), Query Frame = 3
Query:   33 CRGYSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKRALLPFPDLL-PAGRFVHYIK----THTIRS---CCTKHWL--YTPVWAKPADFSGIVVSKRMFFDHIPTK 716
            C  ++LRV GHSLGG   ALL  MLR   P  +C+A SP GG+L +  A AC  FV S  LG ++VPR+S+ ++  +RD+IL++IAR KVNK+  M ++V     P                                       ++VP T FS QL  YRA ++++  L P  +L+ P GR V+++K    T + +    CC       Y PVWAKP  F  I +S  M  DH P +
Sbjct:   15 CSSFALRVVGHSLGGGAAALLATMLRPKFPFVKCIAYSPPGGMLTAEVAAACSGFVTSTVLGSEIVPRMSMHSIHHIRDQILDMIARAKVNKVVAMSALVNFRDPPSKF--------------------------------LHPEDQVPVTEFSRQLAAYRARLEEESKLQPPEELMYPPGRLVYFVKADRGTFSAKDAWCCCIPRGQPRYIPVWAKPDHFQEIKISSTMMVDHFPDR 220          
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: A0A7R9WI90_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WI90_9STRA)

HSP 1 Score: 135 bits (340), Expect = 2.050e-31
Identity = 96/243 (39.51%), Postives = 123/243 (50.62%), Query Frame = 3
Query:   42 YSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRAL-VDQKRALL-PFPDLLPAGRFVHYIKTHTIRSCCTKHWL--------------YTPVWAKPADFSGIVVSKRMFFDHIPTKSC 722
            Y LRV GHSLG    A+L++MLRR +PT RC+  SP GG L+   A  C ++V S  L  D+VPRLSV  ME +RDE+L+LI R KVNKL V    V A  + G L +      GG     D              L+ S+    P+T FS  L R+R +  D+KR    P   L P GR VH +KT    SC  +H L              YTPV+ +  DF  IV+S   + DH P + C
Sbjct:  360 YRLRVVGHSLGAGCAAILSFMLRRRYPTLRCLCYSPPGGFLSRNLAFGCKDYVTSFVLDSDLVPRLSVDNMENLRDEVLDLIGRIKVNKLEVAHRFV-AGGISGFLSSCCWPRNGGXXXDNDDLEALVRGNAD---LLSSRGAVDPDTDFSRSLGRFRDVQADRKRRRAKPRVPLFPPGRIVHLVKTAERTSC--RHGLFRCVTCGASNAGSEYTPVYVQNDDFDEIVISPTFWTDHFPDRVC 596          
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: A0A7S0KXE0_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KXE0_9STRA)

HSP 1 Score: 125 bits (313), Expect = 6.840e-29
Identity = 86/247 (34.82%), Postives = 121/247 (48.99%), Query Frame = 3
Query:   36 RGYSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKR---ALLPFPDLLPAGRFVHYIKTHTIRSCCTKHWL--------------YTPVWAKPADFSGIVVSKRMFFDHIPTKSCP 725
            R Y LR+ GHSLGG T  LL++M+R+  P  RCV  SP G  ++   A AC EF  +  L  D+VPRLS   ME  R+E+LELI R KV+K   M +  +AVS+       +           D              L+Y +  +VP++ +  QL +++ +  ++R     L    + P G+ VH +KT   ++CC  H L              Y PVWA   DF+ I VS  M  DH PT+ CP
Sbjct:  121 RNYKLRIVGHSLGGGTAILLSFMMRQKFPDLRCVTHSPPGCSMSWGLATACQEFTTTFILDSDIVPRLSYDTMENFRNEVLELIGRVKVSK---MEATSKAVSVLRWCRICQKI---------DSEEDREHLMRTISELLY-EPADVPDSAYLQQLEQFKTIQKERRERRGSLRSIKMFPPGKIVHLVKTGEKKTCC--HGLAKCVTCCSSNAGSEYIPVWAGNDDFNEITVSPTMGTDHFPTRFCP 352          
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: B8BW96_THAPS (Lipase_3 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW96_THAPS)

HSP 1 Score: 124 bits (311), Expect = 4.920e-28
Identity = 82/237 (34.60%), Postives = 124/237 (52.32%), Query Frame = 3
Query:   30 RCRGYSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKRA---LLPFPDLLPAGRFVHYIKTHTIRSCCTKHWL---YTPVWAKPADFSGIVVSKRMFFDHIPTKSC 722
            +CRGY+LR+ GHSLGG  G +L+ MLR+ +P  RC+A SP GGLL    A +C EFV +  L  D+VPRLS+  MER+RDE+L LI R K++K  + + +     L G +            + GD              ++Y   + V ++ F  QL+R+ ++   +R+   +     L P GR VH  KT   ++C         YTP+  +  DF+ I +S  ++ DH P + C
Sbjct:  252 QCRGYALRIVGHSLGGGIGVILSLMLRQTYPNLRCIAYSPPGGLLTHDLATSCSEFVNTFILDSDIVPRLSLDNMERLRDEVLHLIPRVKLSKYDIAKRIFWH-GLCGEV------------ELGDLDYLIQQNDD----MLYPP-DYVLDSEFMRQLQRFDSMQQGRRSNRGVSRSIALFPPGRIVHLSKTGQSKACVHASNAGSEYTPIRKENDDFNEIEISPTLWTDHFPNRVC 470          
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: A0A1V9Z9P5_9STRA (Lipase_3 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z9P5_9STRA)

HSP 1 Score: 124 bits (310), Expect = 2.570e-27
Identity = 76/240 (31.67%), Postives = 121/240 (50.42%), Query Frame = 3
Query:   42 YSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKRALLPFPDLLPAGRFVHYIKTHTIRS---------------CCTKHWLYTPVWAKPADFSGIVVSKRMFFDHIPTK 716
            Y L VTGHSLG +T ALL+  LR  +P  RC+A SP G L++   AEA  +FV S  LG+D++ R S+++M+ +RDE+LELI R+KV+K  +MR  +                                       L+++ ++++  + F++QL  Y++++ Q +   P  ++   G+ VH  +   +RS               CCT+   Y   W+KP++F  I VS+ M  DH P K
Sbjct:  500 YGLIVTGHSLGSATAALLSIFLRPKYPKVRCLAYSPPGCLMSPNLAEASADFVTSVVLGKDIIARASLLSMQDLRDEVLELIGRSKVSKAAIMRQALS--------------------------------WKNPNELLHAPNDDIETSSFTMQLSSYKSMLQQIQDHEPIHEMWLPGKVVHLKRQ--VRSQKRGFCMCCRPGTGICCTERTNYNYTWSKPSNFLKIYVSRTMLDDHFPDK 705          
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: K0RXX4_THAOC (Lipase_3 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXX4_THAOC)

HSP 1 Score: 120 bits (302), Expect = 3.270e-26
Identity = 80/240 (33.33%), Postives = 122/240 (50.83%), Query Frame = 3
Query:   42 YSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKRA---LLPFPDLLPAGRFVHYIKT-------HTIRSCCT-----KHWLYTPVWAKPADFSGIVVSKRMFFDHIPTK 716
            Y+LRV GHSLG   G +L+ MLR   P+ RC+  SP GGL+    A+ C  FV S  L  D+VPRLS+  MER+RDE+L LI+R K++K  + + +++  +L                D+GD              ++Y + +E+PE++F   LR++     ++RA   L     L P GR  H +KT       H    C T       + YTP++ +  DF+ I +S  ++ DH P +
Sbjct:  615 YTLRVVGHSLGAGIGFILSLMLRSTIPSLRCLCYSPPGGLVTWDLAKECSGFVNSFVLDSDIVPRLSLDNMERLRDEVLHLISRVKLSKFEIAQQIMKREALDDM-------------DTGDLDYILQQNED----MLYRE-DEIPESQFLQDLRQFETAQQERRASRGLKRSVALYPPGRITHLVKTGQRADCLHGTIGCITCGASNAGYEYTPIYKENDDFNEIEISATLWTDHFPNR 836          
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: W4G853_9STRA (Lipase_3 domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G853_9STRA)

HSP 1 Score: 117 bits (292), Expect = 5.730e-25
Identity = 72/238 (30.25%), Postives = 110/238 (46.22%), Query Frame = 3
Query:   42 YSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKRALLPFPDLLPAGRFVHYIKTHTIRS-------------CCTKHWLYTPVWAKPADFSGIVVSKRMFFDHIPTK 716
            Y L +TGHSLG     LL+ MLR  +PT +C+A+SP G L++   A +   FV S  LG+D++ R S+++ + +RD++L LI R+KVNK  +MR  +                                       L+++  ++   T F+ QL  YR ++ + +A  P  ++   GR VH  +    R              CCT+   Y  VWA   DF  I V++ M  DH P K
Sbjct:  489 YGLTITGHSLGAGAAVLLSIMLRPRYPTLKCLALSPPGCLMSPELATSSASFVTSVVLGKDIIARASLLSFQALRDQVLSLIGRSKVNKTHIMRQALS--------------------------------WRHPDELLHATEDDAGHTVFTTQLLNYRTMLQRIQAKEPIHEMWLPGRIVHLKRLVRSRGHGFCLCCRPGGGVCCTERTHYDYVWAHQTDFLQIYVARTMLDDHFPDK 694          
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: A0A7S2R5S0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R5S0_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.610e-24
Identity = 79/245 (32.24%), Postives = 121/245 (49.39%), Query Frame = 3
Query:   42 YSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGL---LNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKRAL---LPFPDLLPAGRFVHYIKTHTIRSC------CTKHWL------YTPVWAKPADFSGIVVSKRMFFDHIPTKSC 722
            Y+LR+ GHS+G     +L+ MLR+ +P  RC+A SP G     L +   E C  FVL +    D VPRL++++ME +R+E+L++I R KV+K  VM S+V       N    R        D  D              ++Y + +   ++ F  QL  ++ +V +++ L       DL P GR +H +KT     C      C    +      YTPVWA+  DF+ +VVS+ M+ DH P + C
Sbjct:  603 YTLRIVGHSVGAGIATILSLMLRQRYPNLRCLAFSPPGQFTWRLGNESKEFCYSFVLDS----DFVPRLTILSMEHLRNEVLDMIGRLKVSKKDVMNSVVN-----NNFHCCRKQEV----DELDVIEAEIDR------MLYPKGQIPTDSAFFSQLLAFQEIVSERKELRGEFTKLDLYPPGRIIHLVKTGQRNGCSLKLAKCVSCGMSNAGSEYTPVWAENDDFNEVVVSQTMWTDHFPNRVC 828          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7C8_9PHAE1.110e-10968.09Lipase_3 domain-containing protein n=1 Tax=Ectocar... [more]
D7FZ60_ECTSI6.630e-6069.57BiP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6U1LQR0_9STRA3.830e-3535.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9WI90_9STRA2.050e-3139.51Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S0KXE0_9STRA6.840e-2934.82Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
B8BW96_THAPS4.920e-2834.60Lipase_3 domain-containing protein (Fragment) n=1 ... [more]
A0A1V9Z9P5_9STRA2.570e-2731.67Lipase_3 domain-containing protein n=1 Tax=Thraust... [more]
K0RXX4_THAOC3.270e-2633.33Lipase_3 domain-containing protein n=1 Tax=Thalass... [more]
W4G853_9STRA5.730e-2530.25Lipase_3 domain-containing protein n=11 Tax=Aphano... [more]
A0A7S2R5S0_9STRA1.610e-2432.24Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11009contigL-elsbetiae_contig11009:1728..6262 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score100.1
Seed ortholog evalue1.5e-18
Seed eggNOG ortholog159749.K0RXX4
Preferred nameDAGLB
KEGG koko:K13806
KEGG Pathwayko04723,ko04745,ko04925,map04723,map04745,map04925
Hectar predicted targeting categoryother localisation
GOsGO:0001505,GO:0001676,GO:0003674,GO:0003824,GO:0004465,GO:0004806,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005886,GO:0006082,GO:0006629,GO:0006631,GO:0006638,GO:0006639,GO:0006690,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0007166,GO:0007186,GO:0007215,GO:0007216,GO:0007267,GO:0007275,GO:0007399,GO:0007405,GO:0007602,GO:0008150,GO:0008152,GO:0008283,GO:0009056,GO:0009058,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009605,GO:0009628,GO:0009987,GO:0016020,GO:0016042,GO:0016298,GO:0016787,GO:0016788,GO:0019369,GO:0019752,GO:0022008,GO:0023052,GO:0030154,GO:0030424,GO:0032501,GO:0032502,GO:0032787,GO:0033267,GO:0033559,GO:0038171,GO:0042133,GO:0042136,GO:0042995,GO:0043005,GO:0043196,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044304,GO:0044424,GO:0044425,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045202,GO:0045211,GO:0046339,GO:0046340,GO:0046461,GO:0046464,GO:0046486,GO:0046503,GO:0047372,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051606,GO:0051716,GO:0052689,GO:0061351,GO:0065007,GO:0065008,GO:0071704,GO:0071926,GO:0071944,GO:0072089,GO:0097060,GO:0097458,GO:0098590,GO:0098794,GO:0098917,GO:0098920,GO:0098921,GO:0099536,GO:0099537,GO:0099541,GO:0099542,GO:0120025,GO:0120038,GO:1901568,GO:1901575
EggNOG free text desc.Lipase (class 3)
EggNOG OGs2XB6H@2836,KOG2088@1,KOG2088@2759
COG Functional cat.IOT
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size1114
Cds size744
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11009.914.1prot_L-elsbetiae_contig11009.914.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11009 1997..6161 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815317.1107724-UTR-L-elsbetiae_contig11009:1727..19961622815317.1107724-UTR-L-elsbetiae_contig11009:1727..1996Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11009 1728..1996 -
1691682834.6744905-UTR-L-elsbetiae_contig11009:1727..19961691682834.6744905-UTR-L-elsbetiae_contig11009:1727..1996Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11009 1728..1996 -
1622815317.1754675-UTR-L-elsbetiae_contig11009:6161..62621622815317.1754675-UTR-L-elsbetiae_contig11009:6161..6262Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11009 6162..6262 -
1691682834.7324376-UTR-L-elsbetiae_contig11009:6161..62621691682834.7324376-UTR-L-elsbetiae_contig11009:6161..6262Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11009 6162..6262 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815317.121013-CDS-L-elsbetiae_contig11009:1996..22131622815317.121013-CDS-L-elsbetiae_contig11009:1996..2213Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11009 1997..2213 -
1691682834.687486-CDS-L-elsbetiae_contig11009:1996..22131691682834.687486-CDS-L-elsbetiae_contig11009:1996..2213Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11009 1997..2213 -
1622815317.1384807-CDS-L-elsbetiae_contig11009:3111..32181622815317.1384807-CDS-L-elsbetiae_contig11009:3111..3218Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11009 3112..3218 -
1691682834.7056158-CDS-L-elsbetiae_contig11009:3111..32181691682834.7056158-CDS-L-elsbetiae_contig11009:3111..3218Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11009 3112..3218 -
1622815317.151409-CDS-L-elsbetiae_contig11009:4557..47791622815317.151409-CDS-L-elsbetiae_contig11009:4557..4779Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11009 4558..4779 -
1691682834.7154195-CDS-L-elsbetiae_contig11009:4557..47791691682834.7154195-CDS-L-elsbetiae_contig11009:4557..4779Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11009 4558..4779 -
1622815317.161206-CDS-L-elsbetiae_contig11009:5963..61611622815317.161206-CDS-L-elsbetiae_contig11009:5963..6161Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11009 5964..6161 -
1691682834.7247598-CDS-L-elsbetiae_contig11009:5963..61611691682834.7247598-CDS-L-elsbetiae_contig11009:5963..6161Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11009 5964..6161 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11009.914.1

>prot_L-elsbetiae_contig11009.914.1 ID=prot_L-elsbetiae_contig11009.914.1|Name=mRNA_L-elsbetiae_contig11009.914.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=248bp
MLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVA
MERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDS
GDSDGGDSDGGDSLGGLVYSQHEEVPETRFSVQLRRYRALVDQKRALLPF
PDLLPAGRFVHYIKTHTIRSCCTKHWLYTPVWAKPADFSGIVVSKRMFFD
HIPTKSCPRFMETFDMLRKEGRQANEAVAAGAARPGVGRRPRGGSDV*
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mRNA from alignment at L-elsbetiae_contig11009:1728..6262-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11009.914.1 ID=mRNA_L-elsbetiae_contig11009.914.1|Name=mRNA_L-elsbetiae_contig11009.914.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4535bp|location=Sequence derived from alignment at L-elsbetiae_contig11009:1728..6262- (Laminarionema elsbetiae ELsaHSoW15)
GAACGGGAGCGAATCGGCGGGGGGCCTCGCGCTGCCGCGGCTACTCCCTG CGCGTCACGGGCCACTCCCTGGGCGGCAGCACGGGGGCCCTGCTGACGTA CATGCTCCGGAGGGACCACCCGACGGCCCGGTGCGTGGCCATCTCGCCGC TCGGGGGGCTCCTCAACTCCCCGCACGCGGAGGCCTGCGGGGAGTTCGTC CTGTCGGCGGCCCTCGGGGAAGACGTCGTGCCCCGCCTGTCCGTCGTGGC CATGGAGCGCATGCGGGACGAGATTCTCGAGCTCATCGCGAGGACCAAGG CGAGAGAGAGAAGGGAGAACGAGGGGGGGGGGGGGGGGGGGGGATCGTCT TTCCTGGGGTGTTTTTTTTTGGTGGATGTTTGTGTAAATGTAGTTGGATT TTTGTGGNNNNNNNNNNGGGGGGCGGGACCGCGCGCCTCGAGGGCGGGGG GGAGGGAGGGGGGGGGGAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGTTTCGTCCTTCGGGATTTTTTGTTCTTAAACAAATGTTGATAGAAAT AAATTAGATATTTAATGCGCATTCTGGTGTATTTTAGTCTTCACAAATGT CAGCGGTATACTGTATGTATTTACGTCCAGCCTGCTGAGAAAAGGCGTTT CAGGGGGATGGACTACTGTTATCATGTAGACACTCTAACCCTCTCCCTCA CCGTCACGAGCTACATATACAGCGGCGCGTTTTGGGGGCTTTTTGTTGTG CGTCTCGGGGTGGGGGGGGGGGGGTCGGAGAGCTTGTTTTTTCGCGCGGC GGTTTGTGGGCGTGGTGTTGTACGTACGTAGCGTGCATGCCTCTGAGTTT TCCTTGTTTTTTTTTCTTTTCTTTCTTTTTTTCCGTTTTTTTATCGTCGC GTGTCATTACATGCGTGCCGATCGATGGTATCGGCGGCCGCGCTACCTTA ATCCACCACCACGTATATACCGTAACCTGCCCGTGGTCCTCAGCCATGCG CAGATTACTCTTAGGGCAGCCCCGCGAGACTGTATACCGCTCGGGGTGTT GATGGTGTGCTCATGCTGCATGCCCGCCTCTCACACAAAATATTGCCTGG GGGTGCATTCGCAGCCTCCATCGTGAAGGCCAGGCGGTCCACAGGTAAAC ATTTTACACACATGTTTTAGTATCGAAATGTGAAACATCTTTCATTACAC ATGCTTGTCAAGAGAGGGTTTCTGCCTCGAGAATGACGGGGGGGGGGGCG AGGTTAAACGAGATTGCGCCCCTTCAGTAAGGAAACACCTGCGCCCCCTA CAACATATTCTCTCCTTTTTCCTTCCTCTGCACTCTGTTTTTTATTTTCG TGTTTATTTTCCTCCATATGTACATAAATTATCTTTTTCTTTGGTTCGGG CGTGTGGTCACCACATATCTATCTATCTACCGTCTATTAACATGGTACCT GTGCACGTGAACGTGTTTTTCTTGCTATTCAAGGTGAACAAGCTGACCGT GATGAGATCCATGGTGAGGGCCGTGTCCCTGCCGGGGAACCTCGGGGCCT CGAGATCCTCCGCGGCCGGCGGCGGCGGCGACAGCGGCGACAGCGATGGC GGCGACAGCGATGGCGGCGACAGCCTTGGCGGGCTGGTGTACTCGCAGCA CGAAGAGGTCCCAGAGACGCGTTTTTCGGTTCAGCTTAGGCGCTACCGTG CCCTGGTGAGGCTTAAGATACGCTATTTGCGCTATTTACTACTACTGTTG TGGTTTGGATGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GCGGGGGGGGTTTGGGGGGGGGGGGGGGGGCTTCCTTCACATGGGCTCCC TTCTGGGTNNNNNNNNNNGGGTTGGGGTGCGCGTGCGGGGGGGGGGGTGT TGGTGGTTTGGTGTGTTTTGTGGTTTTTGTGTGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGCGCGCGCGGAGGGGGAGCTGCCGTTGTGTGT TTGACGTGGAGCAGGTTCTCATTCCAAGTGATCCCAATCCTGGAGCTGAA TGTAGTCCGGCTGCGTGTCCGATTGGTTGGTTGCCCGTATACCCCCCCCT CTTGTTTCGTTTCATGAGCACAAACGAATGTTTTGTTTTTTCGCCCGCCG ATACGTGCGCCGAAATACGGGAAGACGACGAAGGGGAGAGAAAAGGTTAT CTTGGGCAGTTTGTGTTTCGCTGCGTGTTGTTCGCGCGTAGGGCCAAGCG AAAGAGGCGGTGATTTCCCTCATGAGCTACAGTATATACGAAGTATGTTG CCCTCCCTGCTTGGCCACCACGCTCTTATTCCACTAAATTTGCACTCGGC TGCTGCTGCTGCTGCTGCTGCTGTGTGCGTGTGTGTGCTCGTAGTAAGCA GCGACCTGGCGCCGGCTGACCAATGAAAAGCAACGGCCTTAATGTATCGT AGCGAGAAAAAAAAATGCCGAACGCTCGCAAAGTTGCAGGACGCACGCTA CTGTTGTATTGAGCATCGTGTTGTTCCATGCGTTGGAAACTGGAAATTAT GAAATTTAAAGCTGTTTCGGACGTTTTCATAATGCATGTAAATAGCACGG AATACCCCTGATTTGCCAGCGAAACAGATCGCAGAGGTAGTAAGACTACC CATCCTTTTCCCCACGGAATACTACTACTGTACACCGAACAACCCAAGAC CGAGGCCGCGCACGTGCGATTTTTTTCTCACCCCCGGATCAGTCGCGCTC AACCGTTGTTATTTCGCTATAGAAGGCCTAGGGTTGTGGGTTACCCTATC CTGCTTCCTTAGTTTTTGTCTTTGTAATAGTTGTTCCTCTCGGTAGCGTC GGCTTTCTGTGATGTGGGTGTGTGCACTCGCTACATATGTAGACATTTTC ATTTTGTCTCTCGCGTCCCTTCGGGTTATTTGAATCGCAGTTCGCGTGTC GTGCTCAATCAATTTTTCACCTGTACGTACGTGCCTGTGGCCAATATTTT TCTCGGTTGTTATTTCGCTACTGTCTCGACGCCAAACCACGCAGGTGGAC CAGAAACGAGCCCTGTTGCCGTTTCCCGACCTGCTTCCCGCCGGCCGATT CGTCCACTACATCAAGACGCACACCATCCGCTCCTGCTGCACGAAGCATT GGTGAGTGGGTCGGTCTAATCGAAGGTGAAAACTGCAGTGTTTGGACTGA GAGAGGTACAGGCCCAGCACTCGATACCGGGATGAGTGTAGAGACTTTCT TGGTGACCTCTACATAAACGACGAAAATGTACACAGGGATTAACATACAG AAGGTTTGGTTTTAAAACTGATTTGTTTGTTTTTCTACGAGCTGTGCTGT GCGCGCCGCGACGGTGTTGAAAAAACAGAAATATATGTGAAATCCAGATG GCCAAGCAACCCTACATGTACAGATAGGTGCGCGCAAAATAATCCCTGTC CTGCACCTTTTGAAAGATATATCAGATTATCAAACACGGAACCTAGCCCA CATTTGAGACGGGATTCCGTGGGGTTCAACCGGCAACCGACCGTGCATTG GTTAATCGTGGACGGGGGGGAAACGTAGTTCTGTAGTCGAATGGAGATTC GTGGATGCGTGGTTCAGTAGGATATATGTTTTTTTTACCGGCATATTCAT AGGTGTACCTCCTCGGCTTTTGTGTACCCTGCCCGGTGGATCTTTGTATG TCCTTTTTCGGATCTTCTGATGGCTCTAGCACTTCTGTGATCACGGGCCG TGAGTTGCTAGATTTTTGGAATTAGCAATCTCGATTATACGAGCTATGTA ATGTGAAGAAACAACAACAACAACAACAACAACCGGCATTCCATATATTA CAGTGACGTAGTATTGGTCCGGCCGAGTAGAAAAACACCTAAAATATCCA AACATTCATTAAAAATGTCCGAAGAATTCAACATCTCCCCTGTAGATTTC TGCTTGGTCAGCCAACATGTATTCCGGGGAGAAACCCTTCAGGTTTTAAA GCAAAATATCGAAACCGTGAATTTATGCGTACAATATACATAAAAACAGG CTTTACACGCCGGTATGGGCGAAGCCCGCGGACTTCTCCGGCATCGTCGT TTCCAAGCGCATGTTCTTCGACCACATCCCCACCAAGTCGTGTCCGAGAT TCATGGAGACCTTCGACATGCTCCGGAAAGAAGGGCGCCAAGCCAACGAA GCTGTCGCTGCCGGCGCCGCGCGGCCGGGGGTAGGGAGAAGGCCGCGGGG CGGGAGCGACGTGTGACGAGTTGGCGGGGCAGGGGAGTCGTCGCCGCGGC GGGACGATGACGACGGCGTGTACGAGGAGGCCGGATGAGATGTGTGCCAC AGGCGTGCTCTCGGGGTGGAGAGGAGCGACCGGCTCGTGTTTTGTGCTTT CCCTCTTTGGTGGTTGTTTTAGCCTTTCACCGCGCTTTTCCTTTGCCGAG ATACGCTGTAGATGTGCCCCCCCCCCGCCCCCCCCGTTCTATTTTGTGAA CTTTTGGTCTCGGCCACCAAGCGTGATAATTCGAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11009:1728..6262-

>mRNA_L-elsbetiae_contig11009.914.1 ID=mRNA_L-elsbetiae_contig11009.914.1|Name=mRNA_L-elsbetiae_contig11009.914.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1488bp|location=Sequence derived from alignment at L-elsbetiae_contig11009:1728..6262- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTCCGGAGGGACCACCCGACGGCCCGGTGCGTGGCCATCTCGCCGCT
CGGGGGGCTCCTCAACTCCCCGCACGCGGAGGCCTGCGGGGAGTTCGTCC
TGTCGGCGGCCCTCGGGGAAGACGTCGTGCCCCGCCTGTCCGTCGTGGCC
ATGGAGCGCATGCGGGACGAGATTCTCGAGCTCATCGCGAGGACCAAGAT
GCTCCGGAGGGACCACCCGACGGCCCGGTGCGTGGCCATCTCGCCGCTCG
GGGGGCTCCTCAACTCCCCGCACGCGGAGGCCTGCGGGGAGTTCGTCCTG
TCGGCGGCCCTCGGGGAAGACGTCGTGCCCCGCCTGTCCGTCGTGGCCAT
GGAGCGCATGCGGGACGAGATTCTCGAGCTCATCGCGAGGACCAAGGTGA
ACAAGCTGACCGTGATGAGATCCATGGTGAGGGCCGTGTCCCTGCCGGGG
AACCTCGGGGCCTCGAGATCCTCCGCGGCCGGCGGCGGCGGCGACAGCGG
CGACAGCGATGGCGGCGACAGCGATGGCGGCGACAGCCTTGGCGGGCTGG
TGTACTCGCAGCACGAAGAGGTCCCAGAGACGCGTTTTTCGGTTCAGCTT
AGGCGCTACCGTGCCCTGGTGAACAAGCTGACCGTGATGAGATCCATGGT
GAGGGCCGTGTCCCTGCCGGGGAACCTCGGGGCCTCGAGATCCTCCGCGG
CCGGCGGCGGCGGCGACAGCGGCGACAGCGATGGCGGCGACAGCGATGGC
GGCGACAGCCTTGGCGGGCTGGTGTACTCGCAGCACGAAGAGGTCCCAGA
GACGCGTTTTTCGGTTCAGCTTAGGCGCTACCGTGCCCTGGTGGACCAGA
AACGAGCCCTGTTGCCGTTTCCCGACCTGCTTCCCGCCGGCCGATTCGTC
CACTACATCAAGACGCACACCATCCGCTCCTGCTGCACGAAGCATTGGTG
GACCAGAAACGAGCCCTGTTGCCGTTTCCCGACCTGCTTCCCGCCGGCCG
ATTCGTCCACTACATCAAGACGCACACCATCCGCTCCTGCTGCACGAAGC
ATTGGCTTTACACGCCGGTATGGGCGAAGCCCGCGGACTTCTCCGGCATC
GTCGTTTCCAAGCGCATGTTCTTCGACCACATCCCCACCAAGTCGTGTCC
GAGATTCATGGAGACCTTCGACATGCTCCGGAAAGAAGGGCGCCAAGCCA
ACGAAGCTGTCGCTGCCGGCGCCGCGCGGCCGGGGGTAGGGAGAAGGCCG
CGGGGCGGGAGCGACGTGTGAGCTTTACACGCCGGTATGGGCGAAGCCCG
CGGACTTCTCCGGCATCGTCGTTTCCAAGCGCATGTTCTTCGACCACATC
CCCACCAAGTCGTGTCCGAGATTCATGGAGACCTTCGACATGCTCCGGAA
AGAAGGGCGCCAAGCCAACGAAGCTGTCGCTGCCGGCGCCGCGCGGCCGG
GGGTAGGGAGAAGGCCGCGGGGCGGGAGCGACGTGTGA
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