mRNA_L-elsbetiae_contig11009.914.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: A0A6H5L7C8_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7C8_9PHAE) HSP 1 Score: 350 bits (898), Expect = 1.110e-109 Identity = 192/282 (68.09%), Postives = 205/282 (72.70%), Query Frame = 3 Query: 6 GANRRGASRCRGYSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGG-------------------GGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKRALLPFPDLLPAGRFVHYIKTHTIRSCCTKHWLYTPVWAKPADFSGIVVSKRMFFDHIPTKSCPRFMETFDMLRKEGRQANEAVAAG 794 G +RR R R YSLRVTGHSLGGSTGALL YMLR ++P+ RC+A+SPLGGLLNSPHAE CGEFVLS+ALGEDVVPRLSV+AMERMRDE+LELIARTK NKLTVMRSMVRAVS G S GGD G GLVY Q E VPETRFS QLRRYRALVDQKRA PFP+LLPAGRFVHYIKTHT RSCC +HWLYTPVWAKP DF IVVSKRMFFDHIPTKS PRF ET+ ML KE R EAVA+G Sbjct: 560 GGDRRTPPRFRDYSLRVTGHSLGGSTGALLAYMLRWEYPSVRCLAVSPLGGLLNSPHAENCGEFVLSSALGEDVVPRLSVLAMERMRDEVLELIARTKANKLTVMRSMVRAVSFSRGTGLSPXXXXXXXXXXXXXXXXXXXXRDLEDGGDLG--------------GLVYRQDEPVPETRFSSQLRRYRALVDQKRAASPFPELLPAGRFVHYIKTHTNRSCCIRHWLYTPVWAKPTDFRDIVVSKRMFFDHIPTKSSPRFTETYQMLLKEAR---EAVASG 824
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: D7FZ60_ECTSI (BiP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ60_ECTSI) HSP 1 Score: 216 bits (551), Expect = 6.630e-60 Identity = 128/184 (69.57%), Postives = 136/184 (73.91%), Query Frame = 3 Query: 6 GANRRGASRCRGYSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGAS---RSSAAGGGG--------DSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALV 524 G RR R R YSLRVTGHSLGGSTGALL YMLR ++P+ RCVAISPLGGLLNSPHAE CGEFVLS+ALGEDVVPRLSV+AMERMRDE+LELIARTK NKLTVMRSMVRAVS + G S RSS+ G GG DSG GLVY Q E VPETRFS QLRRYRALV Sbjct: 240 GGGRRTPPRFRDYSLRVTGHSLGGSTGALLAYMLRWEYPSVRCVAISPLGGLLNSPHAENCGEFVLSSALGEDVVPRLSVLAMERMRDEVLELIARTKANKLTVMRSMVRAVSFSRDTGPSPSPRSSSTGFGGCXXXXXXXDSG----RDLEHGDDLGGLVYGQDEPVPETRFSSQLRRYRALV 419
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: A0A6U1LQR0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LQR0_9STRA) HSP 1 Score: 138 bits (348), Expect = 3.830e-35 Identity = 85/238 (35.71%), Postives = 119/238 (50.00%), Query Frame = 3 Query: 33 CRGYSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKRALLPFPDLL-PAGRFVHYIK----THTIRS---CCTKHWL--YTPVWAKPADFSGIVVSKRMFFDHIPTK 716 C ++LRV GHSLGG ALL MLR P +C+A SP GG+L + A AC FV S LG ++VPR+S+ ++ +RD+IL++IAR KVNK+ M ++V P ++VP T FS QL YRA ++++ L P +L+ P GR V+++K T + + CC Y PVWAKP F I +S M DH P + Sbjct: 15 CSSFALRVVGHSLGGGAAALLATMLRPKFPFVKCIAYSPPGGMLTAEVAAACSGFVTSTVLGSEIVPRMSMHSIHHIRDQILDMIARAKVNKVVAMSALVNFRDPPSKF--------------------------------LHPEDQVPVTEFSRQLAAYRARLEEESKLQPPEELMYPPGRLVYFVKADRGTFSAKDAWCCCIPRGQPRYIPVWAKPDHFQEIKISSTMMVDHFPDR 220
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: A0A7R9WI90_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WI90_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.050e-31 Identity = 96/243 (39.51%), Postives = 123/243 (50.62%), Query Frame = 3 Query: 42 YSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRAL-VDQKRALL-PFPDLLPAGRFVHYIKTHTIRSCCTKHWL--------------YTPVWAKPADFSGIVVSKRMFFDHIPTKSC 722 Y LRV GHSLG A+L++MLRR +PT RC+ SP GG L+ A C ++V S L D+VPRLSV ME +RDE+L+LI R KVNKL V V A + G L + GG D L+ S+ P+T FS L R+R + D+KR P L P GR VH +KT SC +H L YTPV+ + DF IV+S + DH P + C Sbjct: 360 YRLRVVGHSLGAGCAAILSFMLRRRYPTLRCLCYSPPGGFLSRNLAFGCKDYVTSFVLDSDLVPRLSVDNMENLRDEVLDLIGRIKVNKLEVAHRFV-AGGISGFLSSCCWPRNGGXXXDNDDLEALVRGNAD---LLSSRGAVDPDTDFSRSLGRFRDVQADRKRRRAKPRVPLFPPGRIVHLVKTAERTSC--RHGLFRCVTCGASNAGSEYTPVYVQNDDFDEIVISPTFWTDHFPDRVC 596
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: A0A7S0KXE0_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KXE0_9STRA) HSP 1 Score: 125 bits (313), Expect = 6.840e-29 Identity = 86/247 (34.82%), Postives = 121/247 (48.99%), Query Frame = 3 Query: 36 RGYSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKR---ALLPFPDLLPAGRFVHYIKTHTIRSCCTKHWL--------------YTPVWAKPADFSGIVVSKRMFFDHIPTKSCP 725 R Y LR+ GHSLGG T LL++M+R+ P RCV SP G ++ A AC EF + L D+VPRLS ME R+E+LELI R KV+K M + +AVS+ + D L+Y + +VP++ + QL +++ + ++R L + P G+ VH +KT ++CC H L Y PVWA DF+ I VS M DH PT+ CP Sbjct: 121 RNYKLRIVGHSLGGGTAILLSFMMRQKFPDLRCVTHSPPGCSMSWGLATACQEFTTTFILDSDIVPRLSYDTMENFRNEVLELIGRVKVSK---MEATSKAVSVLRWCRICQKI---------DSEEDREHLMRTISELLY-EPADVPDSAYLQQLEQFKTIQKERRERRGSLRSIKMFPPGKIVHLVKTGEKKTCC--HGLAKCVTCCSSNAGSEYIPVWAGNDDFNEITVSPTMGTDHFPTRFCP 352
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: B8BW96_THAPS (Lipase_3 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW96_THAPS) HSP 1 Score: 124 bits (311), Expect = 4.920e-28 Identity = 82/237 (34.60%), Postives = 124/237 (52.32%), Query Frame = 3 Query: 30 RCRGYSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKRA---LLPFPDLLPAGRFVHYIKTHTIRSCCTKHWL---YTPVWAKPADFSGIVVSKRMFFDHIPTKSC 722 +CRGY+LR+ GHSLGG G +L+ MLR+ +P RC+A SP GGLL A +C EFV + L D+VPRLS+ MER+RDE+L LI R K++K + + + L G + + GD ++Y + V ++ F QL+R+ ++ +R+ + L P GR VH KT ++C YTP+ + DF+ I +S ++ DH P + C Sbjct: 252 QCRGYALRIVGHSLGGGIGVILSLMLRQTYPNLRCIAYSPPGGLLTHDLATSCSEFVNTFILDSDIVPRLSLDNMERLRDEVLHLIPRVKLSKYDIAKRIFWH-GLCGEV------------ELGDLDYLIQQNDD----MLYPP-DYVLDSEFMRQLQRFDSMQQGRRSNRGVSRSIALFPPGRIVHLSKTGQSKACVHASNAGSEYTPIRKENDDFNEIEISPTLWTDHFPNRVC 470
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: A0A1V9Z9P5_9STRA (Lipase_3 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z9P5_9STRA) HSP 1 Score: 124 bits (310), Expect = 2.570e-27 Identity = 76/240 (31.67%), Postives = 121/240 (50.42%), Query Frame = 3 Query: 42 YSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKRALLPFPDLLPAGRFVHYIKTHTIRS---------------CCTKHWLYTPVWAKPADFSGIVVSKRMFFDHIPTK 716 Y L VTGHSLG +T ALL+ LR +P RC+A SP G L++ AEA +FV S LG+D++ R S+++M+ +RDE+LELI R+KV+K +MR + L+++ ++++ + F++QL Y++++ Q + P ++ G+ VH + +RS CCT+ Y W+KP++F I VS+ M DH P K Sbjct: 500 YGLIVTGHSLGSATAALLSIFLRPKYPKVRCLAYSPPGCLMSPNLAEASADFVTSVVLGKDIIARASLLSMQDLRDEVLELIGRSKVSKAAIMRQALS--------------------------------WKNPNELLHAPNDDIETSSFTMQLSSYKSMLQQIQDHEPIHEMWLPGKVVHLKRQ--VRSQKRGFCMCCRPGTGICCTERTNYNYTWSKPSNFLKIYVSRTMLDDHFPDK 705
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: K0RXX4_THAOC (Lipase_3 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXX4_THAOC) HSP 1 Score: 120 bits (302), Expect = 3.270e-26 Identity = 80/240 (33.33%), Postives = 122/240 (50.83%), Query Frame = 3 Query: 42 YSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKRA---LLPFPDLLPAGRFVHYIKT-------HTIRSCCT-----KHWLYTPVWAKPADFSGIVVSKRMFFDHIPTK 716 Y+LRV GHSLG G +L+ MLR P+ RC+ SP GGL+ A+ C FV S L D+VPRLS+ MER+RDE+L LI+R K++K + + +++ +L D+GD ++Y + +E+PE++F LR++ ++RA L L P GR H +KT H C T + YTP++ + DF+ I +S ++ DH P + Sbjct: 615 YTLRVVGHSLGAGIGFILSLMLRSTIPSLRCLCYSPPGGLVTWDLAKECSGFVNSFVLDSDIVPRLSLDNMERLRDEVLHLISRVKLSKFEIAQQIMKREALDDM-------------DTGDLDYILQQNED----MLYRE-DEIPESQFLQDLRQFETAQQERRASRGLKRSVALYPPGRITHLVKTGQRADCLHGTIGCITCGASNAGYEYTPIYKENDDFNEIEISATLWTDHFPNR 836
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: W4G853_9STRA (Lipase_3 domain-containing protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G853_9STRA) HSP 1 Score: 117 bits (292), Expect = 5.730e-25 Identity = 72/238 (30.25%), Postives = 110/238 (46.22%), Query Frame = 3 Query: 42 YSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKRALLPFPDLLPAGRFVHYIKTHTIRS-------------CCTKHWLYTPVWAKPADFSGIVVSKRMFFDHIPTK 716 Y L +TGHSLG LL+ MLR +PT +C+A+SP G L++ A + FV S LG+D++ R S+++ + +RD++L LI R+KVNK +MR + L+++ ++ T F+ QL YR ++ + +A P ++ GR VH + R CCT+ Y VWA DF I V++ M DH P K Sbjct: 489 YGLTITGHSLGAGAAVLLSIMLRPRYPTLKCLALSPPGCLMSPELATSSASFVTSVVLGKDIIARASLLSFQALRDQVLSLIGRSKVNKTHIMRQALS--------------------------------WRHPDELLHATEDDAGHTVFTTQLLNYRTMLQRIQAKEPIHEMWLPGRIVHLKRLVRSRGHGFCLCCRPGGGVCCTERTHYDYVWAHQTDFLQIYVARTMLDDHFPDK 694
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Match: A0A7S2R5S0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R5S0_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.610e-24 Identity = 79/245 (32.24%), Postives = 121/245 (49.39%), Query Frame = 3 Query: 42 YSLRVTGHSLGGSTGALLTYMLRRDHPTARCVAISPLGGL---LNSPHAEACGEFVLSAALGEDVVPRLSVVAMERMRDEILELIARTKVNKLTVMRSMVRAVSLPGNLGASRSSAAGGGGDSGDXXXXXXXXXXXXXGLVYSQHEEVPETRFSVQLRRYRALVDQKRAL---LPFPDLLPAGRFVHYIKTHTIRSC------CTKHWL------YTPVWAKPADFSGIVVSKRMFFDHIPTKSC 722 Y+LR+ GHS+G +L+ MLR+ +P RC+A SP G L + E C FVL + D VPRL++++ME +R+E+L++I R KV+K VM S+V N R D D ++Y + + ++ F QL ++ +V +++ L DL P GR +H +KT C C + YTPVWA+ DF+ +VVS+ M+ DH P + C Sbjct: 603 YTLRIVGHSVGAGIATILSLMLRQRYPNLRCLAFSPPGQFTWRLGNESKEFCYSFVLDS----DFVPRLTILSMEHLRNEVLDMIGRLKVSKKDVMNSVVN-----NNFHCCRKQEV----DELDVIEAEIDR------MLYPKGQIPTDSAFFSQLLAFQEIVSERKELRGEFTKLDLYPPGRIIHLVKTGQRNGCSLKLAKCVSCGMSNAGSEYTPVWAENDDFNEVVVSQTMWTDHFPNRVC 828 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11009.914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11009.914.1 >prot_L-elsbetiae_contig11009.914.1 ID=prot_L-elsbetiae_contig11009.914.1|Name=mRNA_L-elsbetiae_contig11009.914.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=248bp MLRRDHPTARCVAISPLGGLLNSPHAEACGEFVLSAALGEDVVPRLSVVAback to top mRNA from alignment at L-elsbetiae_contig11009:1728..6262- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11009.914.1 ID=mRNA_L-elsbetiae_contig11009.914.1|Name=mRNA_L-elsbetiae_contig11009.914.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4535bp|location=Sequence derived from alignment at L-elsbetiae_contig11009:1728..6262- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11009:1728..6262- >mRNA_L-elsbetiae_contig11009.914.1 ID=mRNA_L-elsbetiae_contig11009.914.1|Name=mRNA_L-elsbetiae_contig11009.914.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1488bp|location=Sequence derived from alignment at L-elsbetiae_contig11009:1728..6262- (Laminarionema elsbetiae ELsaHSoW15)back to top |