mRNA_L-elsbetiae_contig11007.912.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11007.912.1 vs. uniprot
Match: D8LMR3_ECTSI (Oxidoreductase, short chain dehydrogenase/reductase family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR3_ECTSI) HSP 1 Score: 396 bits (1017), Expect = 4.370e-134 Identity = 206/263 (78.33%), Postives = 222/263 (84.41%), Query Frame = 1 Query: 1 RHTASRLAEEGARVIVHGRRETAVKEAIEFVKGKGNGQKVEGVVADLSSFSGMNHLCDEVLARTDRLDCLLNNAGVFEADFRHSDDGSEYTFAVNVLAPYVITGRLLGLVAKSPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHAAYSLSKLLDIMFNAELARRAPDGVTCNSLDPGTVNTKMLRAGWGMGGIPIKRQASFFRKGSANDQFYLATSDDVSGNTGEYYVSRRVYTPPPPAEDEEACGRLWKVLEDLSGFSYA 789 +HTASRLAEEGA V+VHGRRE+AV+EA+E V G G G KVEG+VADLSS G NHLCDEVL TDRLDCLLNNAGVFEADFRHSDDG EYTFAVNVLAPYVITGRLL L+AK+PGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHA+YSLSKLLDIMFNAELARRAP G+TCNSLDPGTVNTKMLRAGWGMGGIP+K SANDQFYLATSDDV+ ++GEY EAC RLW+VLE+LSGFSYA Sbjct: 64 KHTASRLAEEGATVLVHGRRESAVREAVEHVGG-GKG-KVEGIVADLSSLRGANHLCDEVLRLTDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPKGITCNSLDPGTVNTKMLRAGWGMGGIPVK---------SANDQFYLATSDDVTDSSGEYXXXXXXXXXXXXXXXXEACRRLWRVLEELSGFSYA 315
BLAST of mRNA_L-elsbetiae_contig11007.912.1 vs. uniprot
Match: A0A6V2U0S1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2U0S1_HETAK) HSP 1 Score: 242 bits (618), Expect = 1.160e-73 Identity = 131/264 (49.62%), Postives = 174/264 (65.91%), Query Frame = 1 Query: 1 RHTASRLAEEGARVIVHGRRETAVKEAIEFVKGKGNGQKVEGVVADLSSFSGMNHLCDEVLARTDRLDCLLNNAGVFEADFRHSDDGSEYTFAVNVLAPYVITGRLLGLVAKSPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHAAYSLSKLLDIMFNAELARRAPDGV--TCNSLDPGTVNTKMLRAGWGMGGIPIKRQASFFRKGSANDQFYLATSDDVSGNTGEYYVSRRVYTPPPPAEDEEACGRLWKVLEDLSGFSY 786 RHT+ +LAE GARVIVHGR +E ++++K +K++ VADLS S ++ L D++ + +DCL+NNAGVFE F+ + DG E TFAVNV AP+V+T RLL ++ K PG R++ V+S+S +DF+NLQFEKGGY +H++YSLSKL D M E+A R G T N+LDPGTVNTKML AGWGM GIP+ R AN++F+LATS DV G G+Y+ S R A D EA RLW+ LE +G +Y Sbjct: 74 RHTSKKLAETGARVIVHGRNTARCEETVQWIKDITGNEKIDYFVADLSETSNVHTLADQICEKYSHIDCLINNAGVFEEQFQTTPDGFEMTFAVNVAAPFVLTKRLLPMLQKRPGS-RLIIVSSISQGSRIDFENLQFEKGGYDEHSSYSLSKLCDAMLAFEMAARFGSGAQPTVNTLDPGTVNTKMLLAGWGMCGIPVTR---------ANNEFWLATSPDVEGVNGKYFTSCRESRASQVAYDPEARRRLWEYLERTTGVTY 327
BLAST of mRNA_L-elsbetiae_contig11007.912.1 vs. uniprot
Match: A0A7S1HEF3_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HEF3_HEMAN) HSP 1 Score: 222 bits (566), Expect = 4.360e-66 Identity = 122/265 (46.04%), Postives = 171/265 (64.53%), Query Frame = 1 Query: 4 HTASRLAEEGARVIVHGRRETAVKEAIEFVKGKGNGQKVEGVVADLSSFSGMNHLCDEVLARTDRLDCLLNNAGVFEADFRHSDDGSEYTFAVNVLAPYVITGRLLGLVAKSPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHAAYSLSKLLDIMFNAELARR---APDGVTCNSLDPGTVNTKMLRAGWGMGGIPIKRQASFFRKGSANDQFYLATSDDVSGNTGEYYVSRRVYTPPPPAEDEEACGRLWKVLEDLSGFSYA 789 HTA++LA++G +V++HGR + + ++ +K K G +++ +AD +S + L E+ A+ R+D L+NNAGVF + + DG+E TF VNVLAP+++T +L LV KS G +++ V+S+S SY+LDFDNLQ +KG +SDH++YSLSKL + M ELA R A GVT N+LDPGTVNTKML AGWGM GI + R AN Q LAT + G TG+Y+V R PP D E RLWK++ DL+G Y+ Sbjct: 60 HTATKLAQDGFKVLIHGRSQKRIDATVQRIKDKAPGCELDTFLADFASLEDVRKLSKELHAKCPRIDLLINNAGVFSQSMQKTVDGNEMTFQVNVLAPFLLTSLVLDLVKKSEKG-KIIIVSSISQSYALDFDNLQMQKG-FSDHSSYSLSKLCNAMHAIELAERLKGALPGVTVNTLDPGTVNTKMLEAGWGMCGIDLSR---------ANYQHTLATDPSLDGETGQYFVGGRNTKASPPCYDTEQRQRLWKIMTDLTGADYS 313
BLAST of mRNA_L-elsbetiae_contig11007.912.1 vs. uniprot
Match: A0A7S2V5E2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5E2_9STRA) HSP 1 Score: 223 bits (567), Expect = 1.110e-65 Identity = 129/273 (47.25%), Postives = 176/273 (64.47%), Query Frame = 1 Query: 1 RHTASRLAEEGA----RVIVHGRRETAVKEAIEFVKGK-----GNGQKVEGVVADLSSFSGMNHLCDEVLARTDRLDCLLNNAGVFEADFRHSDDGSEYTFAVNVLAPYVITGRLLGLVAKSPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHAAYSLSKLLDIMFNAELARR--APDGVTCNSLDPGTVNTKMLRAGWGMGGIPIKRQASFFRKGSANDQFYLATSDDVSGNTGEYYVSRRVYTPPPPAEDEEACGRLWKVLEDLSGFSY 786 RHT RLA A V+VHGR A+++V+ K G G +VE +VAD+S+ G+ L ++ AR RLDCL+NNAGVFE ++ ++D E TFAVNV+APY++T LL L+ G R++NV+S+S Y ++FDNLQF+ GGYSDHAAYSLSKLL +M++ E A R +PD +T NSLDPGTVNTKML AGWG GI + R A+++F+LATSD V G G Y+V + + A D +L+++LE ++G SY Sbjct: 95 RHTCGRLAALAADGDSTVVVHGRDPARCALAVDWVREKSLSAGGGGCRVESIVADISTIRGVASLANQFKARFGRLDCLINNAGVFEQSYQLTEDNLEMTFAVNVMAPYLLTFLLLDLMLPHKGS-RIINVSSISQGYDVNFDNLQFQNGGYSDHAAYSLSKLLMVMYSLESAERIGSPD-LTINSLDPGTVNTKMLYAGWGACGIDVSR---------ADNEFWLATSDQVEGINGRYFVGKGDSSASRAAYDSTNRSKLFEILEGITGVSY 356
BLAST of mRNA_L-elsbetiae_contig11007.912.1 vs. uniprot
Match: A0A835YNH2_9STRA (Oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH2_9STRA) HSP 1 Score: 209 bits (531), Expect = 2.460e-61 Identity = 120/266 (45.11%), Postives = 167/266 (62.78%), Query Frame = 1 Query: 1 RHTASRLAEEGARVIVHGRRETAVKEAIEFVKGKGNGQKVEGVVADLSSFSGMNHLCDEVLARTDRLDCLLNNAGVFEADFRHSDDGSEYTFAVNVLAPYVITGRLLGLVAKSPGGGRVVNVASLSASYSLDFDNLQFEKGG---YSDHAAYSLSKLLDIMFNAELARR-APDGVTCNSLDPGTVNTKMLRAGWGMGGIPIKRQASFFRKGSANDQFYLATSDDVSGNTGEYYVSRRVYTPPPPAEDEEACGRLWKVLEDLSGFSY 786 RHTA++LA +GA V+VHGR + + +A+E VK + + +V G++AD+S+ +GM L V T LD L++NAG+FE+ R ++DG+E FA NVLAP+V TG LL L+ S RV+ V+S+S Y+ + QFE+ G +SDH +YSLSKL D M + E R A +T N+LDPGTVNTKML AGWGM GI + R ANDQ+ LATS+++ G +G+Y++S R P D A +LW +SGF Y Sbjct: 24 RHTATKLATDGATVLVHGRNQERLAKAVEGVKKQSSNDQVHGILADISTLAGMRTLSTAVHQHTSVLDILVSNAGIFESCRRTTEDGTELVFATNVLAPFVTTGLLLPLLRAS-AAARVITVSSMSQGYAAGLVDPQFERDGGSAFSDHRSYSLSKLCDAMLSMEFHERFASPTLTFNTLDPGTVNTKMLDAGWGMCGIAVNR---------ANDQYTLATSENLKGVSGKYFISARETRANPACYDPVARKQLWDYCAKVSGFDY 279
BLAST of mRNA_L-elsbetiae_contig11007.912.1 vs. uniprot
Match: A0A2P6TE58_CHLSO (Short chain dehydrogenase reductase family n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TE58_CHLSO) HSP 1 Score: 208 bits (529), Expect = 4.320e-61 Identity = 125/268 (46.64%), Postives = 168/268 (62.69%), Query Frame = 1 Query: 4 HTASRLAEEGARVIVHGRRETAVKEAIEFVKGKGNGQ---KVEGVVADLSSFSGMNHLCDEVLARTDRLDCLLNNAGVFEADFRHSDDGSEYTFAVNVLAPYVITGRLLGLVAKSPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHAAYSLSKLLDIMFNAELA---RRAPDGVTCNSLDPGTVNTKMLRAGWGMGGIPIKRQASFFRKGSANDQFYLATSDDVSGNTGEYYVSRRVYTPPPPAEDEEACGRLWKVLEDLSGFSYA 789 HTA RLA +GA V+VHGR V++A+ V+ G+G G VADL+S + + L +EV A + +D L+NNAGVFE R S+DG E T+AVNV AP+++T LL V + RVV V+S+SA+ S+D+ NLQ E+G +S H AYSLSKL + +F ELA R A VTCN LDPGTVNTKML AGWG GIP+K AN + AT ++G +GEY+V R+ PP A D+ RLW++LE+ +G ++ Sbjct: 22 HTAQRLAAQGATVLVHGRNPGRVEQAVAAVERAGSGSGGAPPRGFVADLASLAQVRRLAEEVAASSPSVDVLINNAGVFEQQLRKSEDGFELTWAVNVAAPFLLTACLLEAVRE-----RVVVVSSISAASSIDWGNLQQERG-FSAHNAYSLSKLAEQLFTFELADRLRAAGSPVTCNCLDPGTVNTKMLSAGWGSIGIPVKE---------ANYELKAATDPALAGTSGEYFVGGRIARPPSIARDKAEQQRLWRLLEEQTGAKWS 274
BLAST of mRNA_L-elsbetiae_contig11007.912.1 vs. uniprot
Match: A0A5J4XR04_9CHLO (Short chain dehydrogenase reductase family n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XR04_9CHLO) HSP 1 Score: 197 bits (501), Expect = 5.330e-57 Identity = 114/260 (43.85%), Postives = 157/260 (60.38%), Query Frame = 1 Query: 1 RHTASRLAEEGARVIVHGRRETAVKEAIEFVKGKGNGQKVEGVVADLSSFSGMNHLCDEVLARTDRLDCLLNNAGVFEADFRHSDDGSEYTFAVNVLAPYVITGRLLGLVAKSPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHAAYSLSKLLDIMFNAELARRA-PDGVTCNSLDPGTVNTKMLRAGWGMGGIPIKRQASFFRKGSANDQFYLATSDDVSGNTGEYYVSRRVYTPPPPAEDEEACGRLWKVLEDLSG 777 RHTAS+L GA V++HGR + V + G K+ +L+SFS + + + A + +D L+NNAGVFE S+DG E T+A+NVLAP+++T L +V R+VNV+S+SA S+DFDNLQ EKG +S H +YSLSKL +MF +LA P GVT N LDPGTVNTKML AGWG GI +K AN ++ LAT ++ TG+YYV+ R P A+D++ RLW+++ D +G Sbjct: 22 RHTASKLVAAGANVLLHGRTQEKVTATKRDLDSIAKGNKISSYTYNLASFSQIRKFAEAIRANHNNIDVLINNAGVFETQRSLSEDGYEMTWAINVLAPFLLTSLLKDVVTD-----RIVNVSSISAGSSIDFDNLQQEKG-FSSHNSYSLSKLASMMFTCDLAEHMKPKGVTVNCLDPGTVNTKMLIAGWGACGIDVK---------DANYEYKLATDPSLAKETGKYYVNGRESRLPAVAKDQKFRKRLWQIMTDQTG 266
BLAST of mRNA_L-elsbetiae_contig11007.912.1 vs. uniprot
Match: A0A061S8W3_9CHLO (Short chain dehydrogenase reductase family n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S8W3_9CHLO) HSP 1 Score: 194 bits (493), Expect = 9.270e-56 Identity = 121/264 (45.83%), Postives = 157/264 (59.47%), Query Frame = 1 Query: 4 HTASRLAEEGARVIVHGRRETAVKEAIEFVK--GKGNGQKVEGVVADLSSFSGMNHLCDEVLARTDRLDCLLNNAGVFEADFRHSDDGSEYTFAVNVLAPYVITGRLLGLVAKSPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHAAYSLSKLLDIMFNAELARRAPDG-VTCNSLDPGTVNTKMLRAGWGMGGIPIKRQASFFRKGSANDQFYLATSDDVSGNTGEYYVSRRVYTPPPPAEDEEACGRLWKVLEDLSGFSY 786 HTA LA G VIVHGR E V++A+ V+ +GNG KV D SS + L D+V +D L+NNAGV++ S DG E T+AVNVLAP+V+T L +V RVVN AS+SA +S+D DNL EKG +S H AYSLSKLLDI+ ELA R + T N+LDPGTVNTKML AGWG GIP++ + D+FY++TS D+ G +GEY+V +R P A D LW++ E +G + Sbjct: 27 HTAKLLAAGGGSVIVHGRNELRVRDAVAEVERVARGNG-KVASYTRDFSSLQEVKRLGDDVKRDFATIDVLVNNAGVYKEGKELSQDGFEMTYAVNVLAPFVLTSALHNIVTS-----RVVNTASISAGHSVDLDNLNQEKG-FSSHNAYSLSKLLDIILTFELAERLKEKPFTVNTLDPGTVNTKMLLAGWGPIGIPVE----------SADEFYVSTSPDLEGVSGEYFVGKRRTRAPAAAYDRGLRETLWRLWEQQTGVRF 273
BLAST of mRNA_L-elsbetiae_contig11007.912.1 vs. uniprot
Match: A0A7S0QHA5_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QHA5_9CRYP) HSP 1 Score: 195 bits (496), Expect = 2.230e-55 Identity = 116/260 (44.62%), Postives = 155/260 (59.62%), Query Frame = 1 Query: 4 HTASRLAEEGARVIVHGRRETAVKEAIEFVKGKGNGQKVEGVVADLSSFSGMNHLCDEVLARTDRLDCLLNNAGVFEADFRHSDDGSEYTFAVNVLAPYVITGRLLGLVAKSPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHAAYSLSKLLDIMFNAELAR---RAPDGVTCNSLDPGTVNTKMLRAGWGMGGIPIKRQASFFRKGSANDQFYLATSDDVSGNTGEYYVSRRVYTPPPPAEDEEACGRLWKVLEDLS 774 HTA++LA G V++HGR ++EA+ ++ VE AD SS ++ EVL + LD L+NNAGVF R ++DG+E TF VNVLAP+++T LL +VAK+ G RV+ V+S+S S +D+DNLQ EKG +S H +YSLSKL + M ELAR R V+ N+LDPGTVNTKML AGWG G+ + AND+F LAT G +G+Y+V R P D AC LW+ LE L+ Sbjct: 80 HTATKLANAGYFVLIHGRDPVRIQEALRKIRLSNPKAGVESFQADFSSLRDVSRFASEVLEQYQCLDLLINNAGVFSQQMRTTEDGNEMTFQVNVLAPFLLTKALLPIVAKAQAG-RVIIVSSISQSSRIDWDNLQMEKG-FSSHESYSLSKLCNAMHALELARATARTAPHVSVNTLDPGTVNTKMLLAGWGYCGMEVA---------DANDEFLLATDPRFEGVSGKYFVGGRERQAAAPCYDAAACAELWRRLEALT 328
BLAST of mRNA_L-elsbetiae_contig11007.912.1 vs. uniprot
Match: A0A7S4DEJ2_9EUKA (Hypothetical protein n=4 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DEJ2_9EUKA) HSP 1 Score: 195 bits (496), Expect = 3.000e-55 Identity = 119/262 (45.42%), Postives = 156/262 (59.54%), Query Frame = 1 Query: 4 HTASRLAEEGARVIVHGRRETAVKEAIEFVKGKGNGQKVEGVVADLSSFSGMNHLCDEVLARTDRLDCLLNNAGVFEADFRHSDDGSEYTFAVNVLAPYVITGRLLGLVAKSPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHAAYSLSKLLDIMFNAELARRAPD-GVTCNSLDPGTVNTKMLRAGWGMGGIPIKRQASFFRKGSANDQFYLATSDDVSGNTGEYYVSRRVYTPPPPAEDEEACGRLWKVLEDLSGFSY 786 HTA RLA EG +V++HGR + + +AI ++ N +EG +AD S + L + V + ++ L+NNAGVF R + DG E T+ VNV+AP+++T LL + KSP G RV+ V+S+S S SLDFDNLQ +KG YS H AYS+SKL D M ELA + GVT N+LDPGTVNTKML GWG GI + ANDQF+LATS ++ +G YYV R T A RLW+ LED G + Sbjct: 100 HTARRLAAEGCKVVLHGRSQQRLDKAISEIRRTTNNPNIEGYLADFESLDEIRKLGETVRSDHPCINILINNAGVFNPKNRKTKDGYETTWQVNVMAPFLLTHALLPNLKKSPKG-RVIIVSSISQSSSLDFDNLQQQKG-YSAHNAYSISKLADAMIAYELADKLQGTGVTVNTLDPGTVNTKMLLEGWGPCGISVS---------DANDQFWLATSPELENTSGRYYVYRNERTSSRFAHTPANRQRLWRELEDSCGIRF 350 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11007.912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11007.912.1 >prot_L-elsbetiae_contig11007.912.1 ID=prot_L-elsbetiae_contig11007.912.1|Name=mRNA_L-elsbetiae_contig11007.912.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=212bp MNHLCDEVLARTDRLDCLLNNAGVFEADFRHSDDGSEYTFAVNVLAPYVIback to top mRNA from alignment at L-elsbetiae_contig11007:3828..5722- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11007.912.1 ID=mRNA_L-elsbetiae_contig11007.912.1|Name=mRNA_L-elsbetiae_contig11007.912.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1895bp|location=Sequence derived from alignment at L-elsbetiae_contig11007:3828..5722- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11007:3828..5722- >mRNA_L-elsbetiae_contig11007.912.1 ID=mRNA_L-elsbetiae_contig11007.912.1|Name=mRNA_L-elsbetiae_contig11007.912.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1272bp|location=Sequence derived from alignment at L-elsbetiae_contig11007:3828..5722- (Laminarionema elsbetiae ELsaHSoW15)back to top |