mRNA_L-elsbetiae_contig10999.891.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10999.891.1
Unique NamemRNA_L-elsbetiae_contig10999.891.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10999.891.1 vs. uniprot
Match: D8LSE1_ECTSI (Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSE1_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 3.530e-111
Identity = 169/205 (82.44%), Postives = 194/205 (94.63%), Query Frame = 2 
Query:    2 KTANPGLQKLLFGLFGLPFGLFMVVVAGGELFTGNTALVTAALIEGKATLSGLAKNWSVSWIGNLVGSVLLAKLVMLAGINAAPGTAAAIALSKVATPCCQTFLKGVICNWMVCMAVWVAAGASSLTEKFLALLLPVSAFVAFGAEHSVANMFLLPLGMFSGASDTVSWTDIFVRNILPVTVGNIIGGAVFQTLPYAAVYGSLLK 616
            K+ANPGLQKLLFGLFGLPFGLFMV+VAGGELFTGNTALVTAAL+EGKAT++ L KNW+ SW GNL+GSVLLAKLV+ AGINAAPGTAAAIA+SKV++P   TFLKG++CNWMVCMAVWVAAGA+SLTEK+LA++LPVSAFVAFGAEHSVANMFLLPLG+FSGAS +VSW D+FV+NILPVT+GNI+GGA+ QT+PYAAVYGSLLK
Sbjct:  125 KSANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKATVANLVKNWTCSWAGNLLGSVLLAKLVVAAGINAAPGTAAAIAVSKVSSPFLPTFLKGIVCNWMVCMAVWVAAGATSLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQDLFVKNILPVTLGNIVGGALCQTMPYAAVYGSLLK 329
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BLAST of mRNA_L-elsbetiae_contig10999.891.1 vs. uniprot
Match: A0A835ZQ31_9STRA (Formate/nitrite transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ31_9STRA)

HSP 1 Score: 278 bits (711), Expect = 6.380e-85
Identity = 132/205 (64.39%), Postives = 165/205 (80.49%), Query Frame = 2 
Query:    2 KTANPGLQKLLFGLFGLPFGLFMVVVAGGELFTGNTALVTAALIEGKATLSGLAKNWSVSWIGNLVGSVLLAKLVMLAGINAAPGTAAAIALSKVATPCCQTFLKGVICNWMVCMAVWVAAGASSLTEKFLALLLPVSAFVAFGAEHSVANMFLLPLGMFSGASDTVSWTDIFVRNILPVTVGNIIGGAVFQTLPYAAVYGSLLK 616
            KT NPGLQKL FG FGLPFGLFMV+VAGGELFTGN A+V+AA  EGKA+L GL K+WS+S+IGN +G++L+ KL++ AG+   P  A  IA++KVA P   TFL+G++CNWMVCMAVWVA+G S+L EK+LA++LPVSAFVAFGAEHS+ANM L+PLGM  GA   V W D   +N+LPVT+GNI+GGA+ Q  PY +VYG+L K
Sbjct:   54 KTLNPGLQKLFFGAFGLPFGLFMVLVAGGELFTGNVAMVSAAFFEGKASLEGLLKSWSISFIGNFIGTILVCKLIVAAGMLTVPAIATEIAVAKVAKPFLTTFLRGIVCNWMVCMAVWVASGCSTLGEKYLAMVLPVSAFVAFGAEHSIANMALIPLGMAGGAK--VKWIDFLTKNLLPVTLGNIVGGALCQAAPYGSVYGTLGK 256
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BLAST of mRNA_L-elsbetiae_contig10999.891.1 vs. uniprot
Match: D7G4R6_ECTSI (Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4R6_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 2.120e-69
Identity = 116/203 (57.14%), Postives = 148/203 (72.91%), Query Frame = 2 
Query:    5 TANPGLQKLLFGLFGLPFGLFMVVVAGGELFTGNTALVTAALIEGKATLSGLAKNWSVSWIGNLVGSVLLAKLVMLAGINAAPGTAAAIALSKVATPCCQTFLKGVICNWMVCMAVWVAAGASSLTEKFLALLLPVSAFVAFGAEHSVANMFLLPLGMFSGASDTVSWTDIFVRNILPVTVGNIIGGAVFQTLPYAAVYGSLL 613
              NPGLQK++FG FGLPFGLFM VV GGELFTGNTA+VTAA+IEGKA++ GL KNW  S++GN VGS+LL  L +  G+   PG+A  IA +K +    Q F +G++CNW+VCMAVW++  AS    KF A+ LP+SAFVA G +HSVANMFL+PLGM  GA   V+W+   + N+LPVT+GNI+GGAV     Y+  +GSL 
Sbjct:  140 ATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAG--VTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLF 340
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BLAST of mRNA_L-elsbetiae_contig10999.891.1 vs. uniprot
Match: A0A6S9B5G3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9B5G3_9STRA)

HSP 1 Score: 227 bits (578), Expect = 8.090e-65
Identity = 111/204 (54.41%), Postives = 145/204 (71.08%), Query Frame = 2 
Query:    5 TANPGLQKLLFGLFGLPFGLFMVVVAGGELFTGNTALVTAALIEGKATLSGLAKNWSVSWIGNLVGSVLLAKLVMLAGINAAPGTAAAIALSKVATPCCQTFLKGVICNWMVCMAVWVAAGASSLTEKFLALLLPVSAFVAFGAEHSVANMFLLPLGMFSGASDTVSWTDIFVRNILPVTVGNIIGGAVFQTLPYAAVYGSLLK 616
            +ANPGLQK++ G FGLPFGL M +V GGELFTGNTALVTAA+ EGKAT   LAKNW  S+ GN VGS+LLA L   +G       A A+A +K + P    F++G++CNW+VCMAV++A+G +SL  K  A+  P+SAFVA G +HSVANMF++PL +  GA  TV   D+FV+N++PVT+GNI+GGA F   P+   +G   K
Sbjct:  103 SANPGLQKIILGAFGLPFGLIMTLVTGGELFTGNTALVTAAVAEGKATKQDLAKNWIASYAGNFVGSLLLAYLAFKSGTLGDAPAAVAVATAKCSLPFDVAFVRGILCNWLVCMAVYMASGCTSLVGKMTAVWFPISAFVALGLDHSVANMFMIPLAILRGAEITVK--DMFVKNLIPVTLGNIVGGAFFVMAPFGTTFGKWFK 304
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BLAST of mRNA_L-elsbetiae_contig10999.891.1 vs. uniprot
Match: A0A7S0GAY3_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAY3_9STRA)

HSP 1 Score: 224 bits (572), Expect = 6.500e-64
Identity = 112/204 (54.90%), Postives = 144/204 (70.59%), Query Frame = 2 
Query:    5 TANPGLQKLLFGLFGLPFGLFMVVVAGGELFTGNTALVTAALIEGKATLSGLAKNWSVSWIGNLVGSVLLAKLVMLAGINAAPGTAAAIALSKVATPCCQTFLKGVICNWMVCMAVWVAAGASSLTEKFLALLLPVSAFVAFGAEHSVANMFLLPLGMFSGASDTVSWTDIFVRNILPVTVGNIIGGAVFQTLPYAAVYGSLLK 616
             ANPGLQK++FG FGLPFGL M +V G ELFTGNTALVTAA +EGK T   L K+W  S++GN VGS+LLA L    G       AAAIA +K + P    F++G++CNW+VCMAV +A+G SS+  K  A+  P+SAFVA G +HSVANMFL+PLGM  GA  T++  D+F++N++PVT+GNI+GGAV    PY   +GS   
Sbjct:  106 AANPGLQKIIFGAFGLPFGLIMTLVTGAELFTGNTALVTAARMEGKITTKDLIKSWVSSYLGNFVGSLLLAYLAFNGGTLGNGPAAAAIATAKCSLPFKVAFIRGILCNWLVCMAVLMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMFLIPLGMMRGAEITIA--DMFIKNLIPVTLGNIVGGAVCVMAPYGKTFGSWFS 307
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BLAST of mRNA_L-elsbetiae_contig10999.891.1 vs. uniprot
Match: A0A7S2XSM2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSM2_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.560e-63
Identity = 108/208 (51.92%), Postives = 147/208 (70.67%), Query Frame = 2 
Query:    5 TANPGLQKLLFGLFGLPFGLFMVVVAGGELFTGNTALVTAALIEGKATLSGLAKNWSVSWIGNLVGSVLLAKLVMLAGINAAPGTAAAIALSKVATPCCQTFLKGVICNWMVCMAVWVAAGASSLTEKFLALLLPVSAFVAFGAEHSVANMFLLPLGMFSGASDTVSWTDIFVRNILPVTVGNIIGGAVFQTLPYAAVYGSLLK*IDQ 628
             ANPGLQK++FG FGLPFGL M +V GGELFTGNTALVTAA +EGK T   L KNW+ S++GN VGS++LA L   +G   +   AAAIA +K +      F++G++CNW+VCMAV++A+G S++  K  A+  P+SAFVA G +HSVANMF++PLGM  GA  T+   ++F RN++PVT+GNI+GGA+    P+    G   +  D+
Sbjct:  101 AANPGLQKIIFGAFGLPFGLIMTLVTGGELFTGNTALVTAARMEGKTTTKALTKNWTASYLGNFVGSLILAYLAFKSGTLGSGPAAAAIATAKCSLAWDVAFVRGILCNWLVCMAVYMASGCSTMVGKMTAVWFPISAFVALGLDHSVANMFIIPLGMLRGADITIM--EMFTRNLIPVTLGNIVGGALCVMAPFGMTMGKWFQKKDE 306
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BLAST of mRNA_L-elsbetiae_contig10999.891.1 vs. uniprot
Match: A0A6U5HVT6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HVT6_9STRA)

HSP 1 Score: 223 bits (569), Expect = 3.580e-63
Identity = 105/204 (51.47%), Postives = 151/204 (74.02%), Query Frame = 2 
Query:    5 TANPGLQKLLFGLFGLPFGLFMVVVAGGELFTGNTALVTAALIEGKATLSGLAKNWSVSWIGNLVGSVLLAKLVMLAGINAAPGTAAAIALSKVATPCCQTFLKGVICNWMVCMAVWVAAGASSLTEKFLALLLPVSAFVAFGAEHSVANMFLLPLGMFSGASDTVSWTDIFVRNILPVTVGNIIGGAVFQTLPYAAVYGSLLK 616
            ++NPGLQK++FG FGLPFGL M ++ GGELFTGNTALVTAA  EGK ++S L KNWS S++GN VGS+LLA L    G   +   +AAIA +K + P    F++G++CNW+VCMAV++A+G S++  K +A+  P+SAFVA G +HS+ANMFL+PLGM  GA  T++   +F++N++PVT+GNI+GGA+     + + +G+  +
Sbjct:  129 SSNPGLQKIIFGSFGLPFGLIMTLITGGELFTGNTALVTAAYAEGKTSMSDLIKNWSASYLGNFVGSLLLAYLAYTGGTLGSAPASAAIATAKCSMPFLTAFVRGILCNWLVCMAVYMASGISTMGGKMVAVYFPISAFVALGLDHSIANMFLIPLGMMRGAEVTIA--QMFMKNLIPVTLGNIVGGALCVAGGFGSAFGNWFE 330
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BLAST of mRNA_L-elsbetiae_contig10999.891.1 vs. uniprot
Match: A0A7S2DZW8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2DZW8_9STRA)

HSP 1 Score: 222 bits (565), Expect = 6.060e-63
Identity = 108/203 (53.20%), Postives = 147/203 (72.41%), Query Frame = 2 
Query:    8 ANPGLQKLLFGLFGLPFGLFMVVVAGGELFTGNTALVTAALIEGKATLSGLAKNWSVSWIGNLVGSVLLAKLVMLAGINAAPGTAAAIALSKVATPCCQTFLKGVICNWMVCMAVWVAAGASSLTEKFLALLLPVSAFVAFGAEHSVANMFLLPLGMFSGASDTVSWTDIFVRNILPVTVGNIIGGAVFQTLPYAAVYGSLLK 616
            +NPGLQK++ G FGLPFGL M +V+GGELFTGNTALVTAA+ EGKAT   LAKNW  S++GN VGS+LLA L   +        A A+A +K + P    F++G++CNW+VCMAV++A+G SS+  K  A+  P+SAFVA G +HSVANMF++PLG+  GA  T++  D+F +N++PVT+GNI+GGA+    P+   +GS  K
Sbjct:  103 SNPGLQKIILGAFGLPFGLIMTLVSGGELFTGNTALVTAAVNEGKATKKDLAKNWIASYLGNFVGSLLLAFLAYKSQTLGTGPAAVAVATAKCSLPFEVAFVRGILCNWLVCMAVYMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMFMIPLGIMRGAEITIA--DMFTKNLIPVTLGNIVGGALCVMAPFGTTFGSWFK 303
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BLAST of mRNA_L-elsbetiae_contig10999.891.1 vs. uniprot
Match: B7G163_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G163_PHATC)

HSP 1 Score: 221 bits (563), Expect = 1.490e-62
Identity = 111/207 (53.62%), Postives = 149/207 (71.98%), Query Frame = 2 
Query:   11 NPGLQKLLFGLFGLPFGLFMVVVAGGELFTGNTALVTAALIEGKATLSGLAKNWSVSWIGNLVGSVLLAKLVMLAG-INAAPGTAAAIALSKVATPCCQTFLKGVICNWMVCMAVWVAAGASSLTEKFLALLLPVSAFVAFGAEHSVANMFLLPLGMFSGASDTVSWTDIFVRNILPVTVGNIIGGAVFQTLPYAAVYGSLLK*IDQ 628
            NPGLQK++ G FGLPFGL M +V GGELFTGNTALVTAA +EGK +   L KNW+ S++GN VGS++LA L   +G +  APG A  IAL+K +      F++G++CNW+VCMAV++A+G S+L  K  A+  P+SAFVA G +HSVANMF++PLGM  GA  T++   +FV+N++PVT+GNI+GGAV    P+   YG   +  DQ
Sbjct:  111 NPGLQKIVMGAFGLPFGLIMTLVTGGELFTGNTALVTAAKMEGKISQKALVKNWTASYVGNFVGSLILAYLAYKSGTLGVAPG-ATNIALAKCSVAWDVAFVRGILCNWLVCMAVYMASGCSTLIGKMTAVWFPISAFVALGLDHSVANMFIIPLGMLRGADITIA--QMFVKNLIPVTLGNIVGGAVAVMAPFGLSYGKWFQNKDQ 314
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BLAST of mRNA_L-elsbetiae_contig10999.891.1 vs. uniprot
Match: B8BXN4_THAPS (Formate/nitrite transporter family member n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXN4_THAPS)

HSP 1 Score: 219 bits (558), Expect = 2.060e-62
Identity = 108/207 (52.17%), Postives = 145/207 (70.05%), Query Frame = 2 
Query:    8 ANPGLQKLLFGLFGLPFGLFMVVVAGGELFTGNTALVTAALIEGKATLSGLAKNWSVSWIGNLVGSVLLAKLVMLAGINAAPGTAAAIALSKVATPCCQTFLKGVICNWMVCMAVWVAAGASSLTEKFLALLLPVSAFVAFGAEHSVANMFLLPLGMFSGASDTVSWTDIFVRNILPVTVGNIIGGAVFQTLPYAAVYGSLLK*IDQ 628
            ANPGLQK++FG FGLPFGL M +V G ELFTGNTALVTAA++EGK T   L KNW  S+ GN+VGS++LA L   +G       + AIA +K + P    F++G++CNW+VCMAV++A+G +SL  K +A+  P+SAFVA G +HSVANMF++PLGM  GA  TV   D   +N++PVT+GNI+GGA+     Y + +G   K  D+
Sbjct:   67 ANPGLQKIIFGAFGLPFGLIMTLVTGAELFTGNTALVTAAVMEGKTTTKDLIKNWVASYAGNVVGSLILAYLAFKSGTLGNAPASVAIATAKCSLPFETAFVRGILCNWLVCMAVYMASGCASLAGKMVAVWFPISAFVALGLDHSVANMFIIPLGMMRGAQITVG--DFITKNLIPVTLGNIVGGALCVMGIYGSAFGKWFKSKDE 271
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10999.891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSE1_ECTSI3.530e-11182.44Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=... [more]
A0A835ZQ31_9STRA6.380e-8564.39Formate/nitrite transporter n=1 Tax=Tribonema minu... [more]
D7G4R6_ECTSI2.120e-6957.14Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=... [more]
A0A6S9B5G3_9STRA8.090e-6554.41Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S0GAY3_9STRA6.500e-6454.90Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A7S2XSM2_9STRA1.560e-6351.92Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6U5HVT6_9STRA3.580e-6351.47Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2DZW8_9STRA6.060e-6353.20Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B7G163_PHATC1.490e-6253.62Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
B8BXN4_THAPS2.060e-6252.17Formate/nitrite transporter family member n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10999contigL-elsbetiae_contig10999:794..6435 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score296.2
Seed ortholog evalue1.1e-77
Seed eggNOG ortholog2880.D8LSE1
Preferred nameNAR1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Formate/nitrite transporter
EggNOG OGs2QUGF@2759,COG2116@1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionnitrite transporter NAR1
Ec32 orthologEc-21_003340.1
Exons4
Model size2202
Cds size552
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10999.891.1prot_L-elsbetiae_contig10999.891.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10999 2377..6368 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815315.0002189-UTR-L-elsbetiae_contig10999:793..23761622815315.0002189-UTR-L-elsbetiae_contig10999:793..2376Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10999 794..2376 -
1691682833.216986-UTR-L-elsbetiae_contig10999:793..23761691682833.216986-UTR-L-elsbetiae_contig10999:793..2376Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10999 794..2376 -
1622815315.0512028-UTR-L-elsbetiae_contig10999:6368..64351622815315.0512028-UTR-L-elsbetiae_contig10999:6368..6435Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10999 6369..6435 -
1691682833.274167-UTR-L-elsbetiae_contig10999:6368..64351691682833.274167-UTR-L-elsbetiae_contig10999:6368..6435Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10999 6369..6435 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815315.0103388-CDS-L-elsbetiae_contig10999:2376..25501622815315.0103388-CDS-L-elsbetiae_contig10999:2376..2550Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10999 2377..2550 -
1691682833.2297306-CDS-L-elsbetiae_contig10999:2376..25501691682833.2297306-CDS-L-elsbetiae_contig10999:2376..2550Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10999 2377..2550 -
1622815315.019856-CDS-L-elsbetiae_contig10999:3475..35701622815315.019856-CDS-L-elsbetiae_contig10999:3475..3570Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10999 3476..3570 -
1691682833.2399836-CDS-L-elsbetiae_contig10999:3475..35701691682833.2399836-CDS-L-elsbetiae_contig10999:3475..3570Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10999 3476..3570 -
1622815315.0311966-CDS-L-elsbetiae_contig10999:4959..51561622815315.0311966-CDS-L-elsbetiae_contig10999:4959..5156Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10999 4960..5156 -
1691682833.249811-CDS-L-elsbetiae_contig10999:4959..51561691682833.249811-CDS-L-elsbetiae_contig10999:4959..5156Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10999 4960..5156 -
1622815315.0404649-CDS-L-elsbetiae_contig10999:6282..63681622815315.0404649-CDS-L-elsbetiae_contig10999:6282..6368Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10999 6283..6368 -
1691682833.2647235-CDS-L-elsbetiae_contig10999:6282..63681691682833.2647235-CDS-L-elsbetiae_contig10999:6282..6368Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10999 6283..6368 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10999.891.1

>prot_L-elsbetiae_contig10999.891.1 ID=prot_L-elsbetiae_contig10999.891.1|Name=mRNA_L-elsbetiae_contig10999.891.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=184bp
MVVVAGGELFTGNTALVTAALIEGKATLSGLAKNWSVSWIGNLVGSVLLA
KLVMLAGINAAPGTAAAIALSKVATPCCQTFLKGVICNWMVCMAVWVAAG
ASSLTEKFLALLLPVSAFVAFGAEHSVANMFLLPLGMFSGASDTVSWTDI
FVRNILPVTVGNIIGGAVFQTLPYAAVYGSLLK*
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mRNA from alignment at L-elsbetiae_contig10999:794..6435-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10999.891.1 ID=mRNA_L-elsbetiae_contig10999.891.1|Name=mRNA_L-elsbetiae_contig10999.891.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5642bp|location=Sequence derived from alignment at L-elsbetiae_contig10999:794..6435- (Laminarionema elsbetiae ELsaHSoW15)
AAAGACGGCCAACCCCGGCCTTCAGAAGCTGCTGTTCGGGCTGTTCGGCC
TCCCGTTCGGGCTGTTCATGGTCGTCGTTGCCGGGGGCGAGCTCTTCACG
GGCAACACGGCGCTCGTCACTGCCGCCCTCATCGAGGGCAAGGCTACGCT
TAGGTAAGAGTTTTTTTGATTTTTTGAGACCCAAGTGGCAGCGCTATGTG
GCTACATATCTACCGGCATTCAGTTGAGAAGCGAAACACAGGTGGGCTGT
GTGTTTATACTGCCGTGTTGATCAAGATTATGATGGCCCCAAAGGCAATA
CAGCACAAGTGCGTACCCAGGTAGGTTAATTGCACAAAAAGAACGGACCA
AAATAATGTACCAGGTAGTTCTTCGTGCCATCGGCGGTAGGGGGGGCGGC
AACTTTGCAGCAGCGAGACGGGGCGGGGGGCATGAGTTGCGCGAGCTGTT
GGATGTCGACTTCACGGCTGGAATTAGTTGAACAATTGAACGGCGTCTGG
TACTAGTTTTTCTAGCCAAGATGGTTTTCACACCCCACATGGTTGGAAAA
GTGATATCAGAAGGACCAGGGGAAAGGGACGGGGGGAGCCGTGGATCCTC
ACCGATACATACATAGATATACCGGCAATTGTGCCAGGACTTGGTTGGCA
GGACTCTCTCTACTGCTACAATGGTATTTAGCCTAAACACGGCGGCAGGC
ATTGAAAGAGTAGTAGTGCCCGTTGCGGCTCTTCTTGTATTCGCCATCAA
GCCATGTATATACATAGTGGCTTTGATGCTGCACTTTTGTACTTCATATG
CTCAGTGTCGAGAGAGAGCTTGGACTTGAAAGTGGAACGCACGTCAGAGT
GTTGACCAGCTCAAGAAGCTTCCTGTTTCGTTTTTCGTGCCAACCAGTCA
TGATCATCTCTCCGTGGCCGTGGCGGGCTTTGTTTCTTTTAACAGGAAAA
CCGAGTGCGCATATGCATCGTACTGGCTGTATCTTTGTTGTGTTGAGTGT
CGAGCTTGGCCTTCAATAACAAATTGAAACGCGCGTCAGTCAGAGTGCCA
ACCAACTCTCAAGAAGAACCCATTCTTCTTTCTCCTCCTTCTTGTTGGTG
CCAAATCATGATTCCTCTTTTGGTCGGGTCAGGATTTTGAGTGAGCAAGC
ACGAAACGAATCCGTATAATAGACTACATACCCCCCCCCTCCACCCCCAC
AAACTACGATGCCCCCCAATGCATGCATTTGCGTTGCACGCCAAACGCGT
TAATATTTTTACGCACATCAATCTTTCAGCGGGCTGGCCAAGAACTGGTC
CGTCTCTTGGATCGGCAACCTGGTGGGCTCCGTGCTGCTGGCCAAGCTCG
TGATGCTGGCCGGGATCAACGCGGCCCCCGGCACCGCCGCCGCGATCGCC
CTGTCCAAGGTCGCCACCCCCTGCTGCCAGACCTTCCTTAAGGGGGTCAT
TTGCAACTGGATGGTGTGCATGGCGGGTGAGAAGAGAGGAAGAGGGAGAG
GGAGATTGGCCTCTAAAAGAGAGGAGGAACAGTTGGAAAGAGACTGGCAT
TGACGGGGAGAGGGGAGGGGGGGGGGGCATACCGTAGGTGACACAAGATA
CCGCACCCCTTGGACCGAATTTTAGAGCTCGATTACTCCGTAACGAAGAG
GGTTCCAGCACCAAACGACACATTTTCGGACAGCCACCGACTAATATTTC
GTACGCCGCCCTTTTCGGCACTGGCACTCTTCTTGCTGGGAAGAAATCGA
GCTTCAAAAATCTGTCCAGGGGTGTGGTATCTTGTGTCACCTACGGTAGG
CAGCAAGCAACCGCTGCACTGCACGCTGACTGTAATGTGTGGTCGTGGGT
GTTTTTTGCCCATGCATTTTTTTTGTATTTTCGCATTTATTTCCAGTGCT
CGACAGACTTCTTGCCACAGGGGCAGAGTACTGAACCGTGGTCACACAGA
AAGGTTATTTTCCCCGGGGCCCCCACTCCCCCCTTCTGCGGTGCTTGCCT
AAGGTTTTTGTCGCGGGAAGGGTTCAGCCGTCCCTTTCCCTCGTCCCTCG
TCGACGGTGAGGTCGAAGTTCGTTAGATTGGATAGTTCACAAAACAAGGC
TGTAAAAGAGTTCAGTGTAGGTAGACATGACTGCAAGGTGGTGATCGCAG
CTGTTGTGGCCGTGCGTCTGTGCTGCCATCCATCCATTCGGGTGAGGAAA
CGCACACAAGCGAAACAGGCAAGGGTTGAAAGGGGAAAAAAGACAACCCC
TTTTGCATACCGGCGCCTTGCCGAGGTATCGTATGGTATTGTATGTATGC
GTATGCAAATGTGCAGCATGTACATACATAAACGTGAAAGTATCGAGTCA
AGGACTGAAGCGAGTCATACATAGTGTGGGGGTTTTATTGTCGTGCCAAG
CGTGTGCGCGTATCTCTTTGCCACCGTCCATGTATGTATCGTATGTGGCT
GACACGCACAGAGGCACGTGCGTGCACCCATGCGTCTGCCATATGGCCGG
CAGCTGCTGGGCTGATTTTGTCCCAGGGATTACGGTACTCGTGTGGATCG
TTTGCGCCGTCTCCCGCGTACCTGCGAAAAGCGAAAAACAACTGAAAGTT
GCTTGCCCCTAACCAGCGACATGCAACGAAGGCGAAGCAGCGAACGGTCG
TGCAGTGCCGCAACAACACCACCAACAACAACAACAATAACAATAACAGC
GACATCAAGTGATGCACGCAAAACAACAGCACCAAACCGCCCGCCGTCTC
ATGCTTGGACGCCTTCTCCTGCCGCTGTGGCTGCCGTTTTTGTCTTTCGC
CTCCGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCAGTGTGGGTTGCCGCCGGCGCGAGCTCGTTGACGGAG
AAGTTTTTGGCGTTGCTGCTGCCGGTCTCGGCCTTCGTGGCGTTCGGGGC
GGAGCACTCGGTGAGCGCGCCGGCGGGTCATTCGTGGGCGTGGTGTGGCG
TAAGCGTGTCCGTCAGGGGGTGTTTTGTGATGCGTCATTTCATCGGCGTA
TTTCCGTGTACAATAACAAAAATAAATATTTCTCGAATATTATCATTTTG
TGTACATTTATATGTACAAAGTGTGTTTTCGAAAGTATGTTCTCATGCGT
ACATGGATAGATAGAAGTATGTTTGCGTGGAAGCGTGAGTTGTGTTGATG
CTGCTTTGCGTACATCCGTATGTACGCGCTCTCTTGGCACACCGCAACGA
TACCAAATAGCGTATTTTGACAGTTTTCGGCTGCATCTCGTCGTGGTGGC
TGTCGGCTGTTCGAAAACGCCGCCGCCATGGTGGTGATGATGGTGGTTGG
TGGTGTGGTTGTTGGCCATATATTGTCCCGTTTGTTAAAAAAAAGACATG
CGATTTTCATCACCAAGTGCTATTTATTACGACTGGTTACGGAGTAATGT
CTGAGTACATACGTACGTGGGTTGATCCGCGTCAATATTGGCTACTTGCT
ACACGTGGCGCGGTCTATTTGGCTGCAATACGCCAGCCGTTGTCTTTCTC
GTGCTCGTGTGTGAGTCAATTCACCCCCTCTCCCCCCGTGGAGAGTCTTT
CTTTCCAAGGTCGCCTTTGTTGCAGACAAAGCAGTTACTCTCTTGCAGGC
ATGTGCTGCTGCAGTAAGTCAGTATTTCATCAACACTCAAGCCGGCATGT
CTATTCATTTTGTATTAAATGCATACATTGCATAGAGATACATATTCCCC
ACAAAAGCTCGTTTTGTGGTAACCTTCTTTGAGAATATCTGCCGCTGGGT
TTTTTTCTCTGCTTCGCGACATCCAGCTTCTGTACCCATTAGACTGATCT
CCCTCCCCTCCCTCCCTCCCTCCCTCTGTCTCCAGGTGGCCAACATGTTC
CTCCTTCCCCTCGGCATGTTCAGCGGCGCGTCGGACACGGTGAGCTGGAC
GGACATCTTCGTCAGGAACATCCTGCCCGTCACTGTCGGCAACATCATCG
GCGGCGCCGTCTTCCAGACGCTCCCGTACGCCGCCGTGTACGGGTCGCTC
CTCAAGTAGATCGACCAGTAGGGGAGATGAGGGAAGCGTTTTTGAGGTGT
GGATGGAGTTAATTAACCGCAAGGTGCAAGGAGGTTAGTGAGTGGATAAA
AGTGGATGAAGAATAAGAGGTGCTGATGGTTATAGCAGTAGTATTTAGCT
CTCTTTTTTTTTGTTGCTTCTTCCTCCTTTTCATTTGTTTTCTCCTTTTT
CGTGTGCTTTGTTCGCTATTTTCTTCTCGTATCCTTTGTCGTTTTTCGTC
CTCGGTATTTGTGGTTGTTTTTTAAGTCCGGCCGTCCCCGGCCGTCGACT
TTTTGATTCGGGTCGGATATTTAGTGGAAGACAAAAACGCCTCTTACGCC
CAGTCCGACAAGCCGACACCATTCAGTTAAACTTGCAGGCGGCGGGGGTG
AGAGGGGGACTGGTGTCGAGTTTTTTAACAGCTGCCCTATATACGTTGCC
GAACCCCTCCGTCTTCGGCAAACCGGCGGTTCAGTTTGTTGAGTGTGGAA
GGGCAAGGAAAGACGATGTTGGCATGATTTTTTTTTTTTCTCTGGCGCTA
CATATGCAAGTCCCCCCGTAGCTTGCACGCGCAATGGGCAAAGGGTACAC
GCACCGTGGTACGGGGCCCCCTTGTCGGTGTACGGGGCCCCCTTCTCGAC
CCGAGTCGCAGCCGAGTGGCGCGTGGAATAGGCAGCTTTCATATCATGTG
TGTCGTGTCGTCCTTTAGTGGTGGTATCATGTGCTTTGCTCTACTTAAAG
CAAGCAGTCAAGGAGTGCAAGACACAATGAGTTTTAGTCTTTTGGAGGTA
GGGAGGTAGGTACATACATAGGTGCGTTGGGTTATCGTCGTGAGCAAAAC
CGGGTCGAAGGAAAACTGGGCCCGAGAGATGGATTGATTGAAAGGAGGCA
CGTTTTTTTTCTGACGGCGGGAGTTTGCTTGGTGTTCATTTTGGCAGTAT
ATTTATTCAGGAAAAATCTACTAAATACTCCTACCTACATAGCAAGCGTG
TTTTGGGTGTGTTTAAGGGGAGGAGGGAACGGAGATTATTGGCGCGTTGG
CTCGGTGCTAGAGTATTTACGTGGTGTACGTACACTTCGAGGTAGGCTAC
TTTTAATTTAGCCCTTGCTCTGGGTACCTAGATGGCAAATTGTTGCAGTG
CATACGATGTAAAACGGAAACAGCCTGGCTCTGCGTCGTTGCCGTGCTAC
ATCCTTTTTCCTGCATGCATCCAAGCGGGCAGCCAGGTGCTCCTTGGATA
CAAAAAGTTAGTGTCTGGCTGATAGGCTCCTTCTTTATTCTTCACTTCCC
CTTCTGTTTAAAAACAAAATATATATGGTATGTGACTTGACTTATACGAG
ATTGAGTTTTCCCTGGGTGCAGGGTCTGTGGGTTGTTGGTCAAGCCACGC
ACCGGAACCAGGCTTTTTCAGGAGACTTTTCAAGCTGGCGACGCACGTGG
CGACATACGCCAGTTCTGGCTCTTTAGTGTGACATCGCGACTCATAGTGT
TGCGCAACCCGAACAAGCAGCAGTCAACACTGCTGTTCTCTTGCTTCACC
CCGCCCTCGATTGTTTCGGTCATGAGCAACGTCTGAAACGGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10999:794..6435-

>mRNA_L-elsbetiae_contig10999.891.1 ID=mRNA_L-elsbetiae_contig10999.891.1|Name=mRNA_L-elsbetiae_contig10999.891.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1104bp|location=Sequence derived from alignment at L-elsbetiae_contig10999:794..6435- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTCGTCGTTGCCGGGGGCGAGCTCTTCACGGGCAACACGGCGCTCGT
CACTGCCGCCCTCATCGAGGGCAAGGCTACGCTTAGATGGTCGTCGTTGC
CGGGGGCGAGCTCTTCACGGGCAACACGGCGCTCGTCACTGCCGCCCTCA
TCGAGGGCAAGGCTACGCTTAGCGGGCTGGCCAAGAACTGGTCCGTCTCT
TGGATCGGCAACCTGGTGGGCTCCGTGCTGCTGGCCAAGCTCGTGATGCT
GGCCGGGATCAACGCGGCCCCCGGCACCGCCGCCGCGATCGCCCTGTCCA
AGGTCGCCACCCCCTGCTGCCAGACCTTCCTTAAGGGGGTCATTTGCAAC
TGGATGGTGTGCATGGCGGCGGGCTGGCCAAGAACTGGTCCGTCTCTTGG
ATCGGCAACCTGGTGGGCTCCGTGCTGCTGGCCAAGCTCGTGATGCTGGC
CGGGATCAACGCGGCCCCCGGCACCGCCGCCGCGATCGCCCTGTCCAAGG
TCGCCACCCCCTGCTGCCAGACCTTCCTTAAGGGGGTCATTTGCAACTGG
ATGGTGTGCATGGCGGTGTGGGTTGCCGCCGGCGCGAGCTCGTTGACGGA
GAAGTTTTTGGCGTTGCTGCTGCCGGTCTCGGCCTTCGTGGCGTTCGGGG
CGGAGCACTCGTGTGGGTTGCCGCCGGCGCGAGCTCGTTGACGGAGAAGT
TTTTGGCGTTGCTGCTGCCGGTCTCGGCCTTCGTGGCGTTCGGGGCGGAG
CACTCGGTGGCCAACATGTTCCTCCTTCCCCTCGGCATGTTCAGCGGCGC
GTCGGACACGGTGAGCTGGACGGACATCTTCGTCAGGAACATCCTGCCCG
TCACTGTCGGCAACATCATCGGCGGCGCCGTCTTCCAGACGCTCCCGTAC
GCCGCCGTGTACGGGTCGCTCCTCAAGTAGGTGGCCAACATGTTCCTCCT
TCCCCTCGGCATGTTCAGCGGCGCGTCGGACACGGTGAGCTGGACGGACA
TCTTCGTCAGGAACATCCTGCCCGTCACTGTCGGCAACATCATCGGCGGC
GCCGTCTTCCAGACGCTCCCGTACGCCGCCGTGTACGGGTCGCTCCTCAA
GTAG
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