mRNA_L-elsbetiae_contig10981.882.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10981.882.1 vs. uniprot
Match: D7G031_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G031_ECTSI) HSP 1 Score: 492 bits (1267), Expect = 3.570e-157 Identity = 374/627 (59.65%), Postives = 417/627 (66.51%), Query Frame = 1 Query: 1 QLTTDVFAGICGESAAPRDVYLAATVGGRSGXXXXXXXSGFRCALKSMGVPVLVCSSYRLHSAVACSLGGDGGIGXXXXXXXXXGGAAANEAPANGKMRRVVQKAVSMVERFERWRPAGGAYAAAAAHAACPPTLATVRAEVEELG-----VALARARSSTARWTESHALFERLLQLAGPLDAYFQANPSGTSLLQSEWQAIREAASILEPALEVVAKVHAAEEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----KTRGVSLSESIELHANLHCSFIYPLQDIR-----SGGSGXXXXXXXSRVGAAADTAPAPSAGDEGRLCSKRVENLTAEAQALLGAVAQDMEGSGLGRAREDPEAAAMLLDPRFKQCCASTCVDGGNALKLRALTVVSSQLRRFRGPA-EAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYXXXXXXXXXXGDG-----------HRVVEDALAELGEYMLEPAGKRHELLPYWKLNGTDTRDSGTGQVVLAARWPHLALLARLYAGVDPTSRQGERHFGGGT----DIGVSVSLLQWSGVPPWRIEEMLLVRLNKHLVPEVADFRRG 1791 +LT D+F IC +S P+D+YLAAT+GG SG S F A + MGVPVLVCSSYRLHSAV+CSLG G A + AN KMR VV++AVSMVE FE WRP GG +AAA ALARAR ST RWT+SHALFERLLQLAGPL+A+F+ P+ SL SEWQAIRE ASILEPALEV+AKVHA EEG XXXXXXX K RG+ L+ESIELHANLHCSFIYPLQDIR + +G + V A A AP CSKRV LT EAQALL AVA+ ME SGLGRARED EA +MLLDPRFKQCCASTCVDGG+ALKLRAL VSSQLR+FR PA EAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX XXXXXXXXXX +R+ EDA AEL EY+LEPA KRHELL YW+L+GTDT DSGTG+VVLAARWPHLAL+ARLYAG+D TSRQGERHFGGG+ ++G +V LQ G+PPWRIE+MLLVRLN+H+VPEV DF RG Sbjct: 308 ELTADLFTSICHKSE-PKDIYLAATIGGCSGGGG----SSFGRAFQDMGVPVLVCSSYRLHSAVSCSLG------------CAAAGGAGEDKCANAKMRDVVRRAVSMVEVFEHWRPEGGVFAAAXXXXXXXXXXXXXXXXXXXXXXXXXXAALARARGSTTRWTDSHALFERLLQLAGPLNAHFRQAPTDRSLQPSEWQAIRETASILEPALEVLAKVHAREEGXXXXXXXXEEGRRAAEGVGTSAAAAACNGGDRGAAGAAARDKKKPRGIFLAESIELHANLHCSFIYPLQDIRGDALATAATGEGVAAAPAMVAAGAGAAP---------FCSKRVAELTPEAQALLEAVAEGMEESGLGRAREDTEAVSMLLDPRFKQCCASTCVDGGSALKLRALKAVSSQLRKFRDPASEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSRLDKMRQAQKMEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPGEVDNRLSEDARAELEEYLLEPASKRHELLSYWRLHGTDTLDSGTGEVVLAARWPHLALVARLYAGIDSTSRQGERHFGGGSGGGAELGAAVRSLQRGGMPPWRIEQMLLVRLNRHVVPEVVDFLRG 908
BLAST of mRNA_L-elsbetiae_contig10981.882.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 1.310e-8 Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 1507 LLPYWKLNGTDTRDSGTGQVVLAARWPHLALLARLYAGVDPTSRQGERHFGGGTDIGVSVSLLQWSGVPPWRIEEMLLVRLNKHLVPEVADF 1782 +L YW GTD+ + TG+V A P+LA +ARLY G++ TS Q ER+F + + + L+ + +P ++E M+ +RLN+HLV EV + Sbjct: 530 VLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNF---SALAHLIGQLRCNMLPS-KVERMMFIRLNRHLVAEVREL 617
BLAST of mRNA_L-elsbetiae_contig10981.882.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 1.550e-8 Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 1507 LLPYWKLNGTDTRDSGTGQVVLAARWPHLALLARLYAGVDPTSRQGERHFGGGTDIGVSVSLLQWSGVPPWRIEEMLLVRLNKHLVPEVADF 1782 +L YW GTD+ + TG+V A P+LA +ARLY G++ TS Q ER+F + + + L+ + +P ++E M+ +RLN+HLV EV + Sbjct: 725 VLGYWNRRGTDSVSATTGKVTSPAEMPYLAFIARLYLGIEATSCQAERNF---SALAHLIGQLRCNMLPS-KVERMMFIRLNRHLVAEVREL 812
BLAST of mRNA_L-elsbetiae_contig10981.882.1 vs. uniprot
Match: A0A6H5L902_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L902_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 3.270e-8 Identity = 45/132 (34.09%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 1429 DGHRVVEDALAELGEYMLEPAG---KRHELLPYWKLNGTDTRDSGTGQVVLAARWPHLALLARLYAGVDPTSRQGERHFGGGTDIGVSVSLLQWSGVPPWRIEEMLLVRLNKHLVPEVADFRRG*GAVSSVR 1815 D V + E+ EY PA K +++L +W+ G+ D G VV AA++P L++LAR+Y +D TS Q ER F G +G + L+ + VP R+E ++ +R N HL+PE+ G G + + + Sbjct: 150 DQPSVTDRVQKEVDEYTKLPAAVPAKDYDVLGFWRDAGSPRLDPH-GNVVSAAQFPILSMLARVYLCIDSTSCQSEREFSG---LGFVYNNLRQAMVPD-RVEMVMFLRSNPHLIPEINKLDNGLGKLLAAQ 276
BLAST of mRNA_L-elsbetiae_contig10981.882.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 1.180e-7 Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 1507 LLPYWKLNGTDTRDSGTGQVVLAARWPHLALLARLYAGVDPTSRQGERHFGGGTDIGVSVSLLQWSGVPPWRIEEMLLVRLNKHLVPEVADF 1782 LL +W GTD+ + TG+V A P+LA +ARL+ G++ TS Q ER+F + + S R+E M+LVRLNKHL+ EV + Sbjct: 526 LLGFWNRRGTDSVSAATGKVTSPAEMPYLAFIARLHLGIEATSCQAERNFSALAHLIGDLCCNMLSH----RVERMMLVRLNKHLLAEVRAY 613
BLAST of mRNA_L-elsbetiae_contig10981.882.1 vs. uniprot
Match: A0A6H5L256_9PHAE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L256_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 1.260e-7 Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 1429 DGHRVVEDALAELGEYMLEPAG---KRHELLPYWKLNGTDTRDSGTGQVVLAARWPHLALLARLYAGVDPTSRQGERHFGGGTDIGVSVSLLQWSGVPPWRIEEMLLVRLNKHLVPEV 1773 D V + E+ EY PA K +++L +W+ G+ D G VV AA++P L++LAR+Y +D TS Q ER F G +G + L+ + VP R+E ++ +R N HL+PE+ Sbjct: 148 DQPSVTDRVQKEVDEYTKLPAAVPAKDYDVLGFWRDAGSPRLDPH-GNVVSAAQFPILSMLARVYLCIDSTSCQSEREFSG---LGFVYNNLRQAMVPD-RVEMVMFLRSNPHLIPEI 260
BLAST of mRNA_L-elsbetiae_contig10981.882.1 vs. uniprot
Match: A0A6H5KJT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT6_9PHAE) HSP 1 Score: 62.8 bits (151), Expect = 5.790e-7 Identity = 34/92 (36.96%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 1507 LLPYWKLNGTDTRDSGTGQVVLAARWPHLALLARLYAGVDPTSRQGERHFGGGTDIGVSVSLLQWSGVPPWRIEEMLLVRLNKHLVPEVADF 1782 +L +W GTD+ S TG V A P+LA +ARL+ G++ +S Q ER+F + + + L+ + + ++E M+L+RLN+HLV EV + Sbjct: 148 VLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHL---IGHLRCNMLSR-KVERMMLIRLNRHLVDEVREL 235
BLAST of mRNA_L-elsbetiae_contig10981.882.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 62.8 bits (151), Expect = 2.770e-6 Identity = 34/92 (36.96%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 1507 LLPYWKLNGTDTRDSGTGQVVLAARWPHLALLARLYAGVDPTSRQGERHFGGGTDIGVSVSLLQWSGVPPWRIEEMLLVRLNKHLVPEVADF 1782 +L +W GTD+ S TG V A P+LA +ARL+ G++ +S Q ER+F + + + L+ + + ++E M+L+RLN+HLV EV + Sbjct: 713 VLGFWNRRGTDSVCSTTGNVTSPAEMPYLAFIARLFLGIEASSCQAERNFSALSHL---IGHLRCNMLSR-KVERMMLIRLNRHLVDEVREL 800 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10981.882.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10981.882.1 >prot_L-elsbetiae_contig10981.882.1 ID=prot_L-elsbetiae_contig10981.882.1|Name=mRNA_L-elsbetiae_contig10981.882.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=551bp MGVPVLVCSSYRLHSAVACSLGGDGGIGGIGGGGADGGGAAANEAPANGKback to top mRNA from alignment at L-elsbetiae_contig10981:386..4038+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10981.882.1 ID=mRNA_L-elsbetiae_contig10981.882.1|Name=mRNA_L-elsbetiae_contig10981.882.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3653bp|location=Sequence derived from alignment at L-elsbetiae_contig10981:386..4038+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10981:386..4038+ >mRNA_L-elsbetiae_contig10981.882.1 ID=mRNA_L-elsbetiae_contig10981.882.1|Name=mRNA_L-elsbetiae_contig10981.882.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3306bp|location=Sequence derived from alignment at L-elsbetiae_contig10981:386..4038+ (Laminarionema elsbetiae ELsaHSoW15)back to top |