mRNA_L-elsbetiae_contig10978.877.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE) HSP 1 Score: 622 bits (1605), Expect = 8.000e-225 Identity = 296/311 (95.18%), Postives = 302/311 (97.11%), Query Frame = 1 Query: 1 MNSTNPVQGARELKPTSKRDCWVFSHMNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDVCIPAWYRQKHYLHLPYQDDFCGPTQPESGLVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV 933 MNSTNPVQGA+ELKPTSK DCWVFSHMNKSGGMTVR MIMPFL EKGVST LFDDIEWSSGRSYAE FVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRA HDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFH++VVSEFCQQARGHGDVCIPAWYRQKHYLHLP+QDDFCGPTQPESGL QFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNL RFDWVKEFQKSGK+NSGGSQFETAS+ ALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV Sbjct: 32 MNSTNPVQGAQELKPTSKCDCWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRSYAETFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLHLPHQDDFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV 342
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI) HSP 1 Score: 241 bits (616), Expect = 3.960e-75 Identity = 125/303 (41.25%), Postives = 179/303 (59.08%), Query Frame = 1 Query: 79 MNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENFVKENAVFTYGGYTEGLRMYDD---RDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASK--VDLLTFAEHWGNYGLRQFALASIKAEDVFHDKV---VSEFCQQARGHGDVCIPAWYRQKHYLHLPYQDD--------FCGPTQPESG---LVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 930 MNK+GG TV+ M+ P+ K + V+ GL+D +W G+ +A++F+ + +G YTEGLR + R+CKWFT+FRHP+ R+VSAYFYC++ D LCA V LDA+ DL FAEHWG++GLRQFALA + E++ +KV + C HG P WY K YL + + G SG + L QE L+ YAAVG++E+W+ S+ LFN L + FDW + F GK+NS G+ +E L++ W P L++++ LD+LLYD+A+SVH QV G+ Sbjct: 1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFAQDFLGDENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPY--HGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRS-WTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI) HSP 1 Score: 202 bits (515), Expect = 3.620e-58 Identity = 116/315 (36.83%), Postives = 169/315 (53.65%), Query Frame = 1 Query: 49 SKRDCWVFSHMNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENF-VKENAVFTY----GGYTEGLRMYD--DRDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDVCIPAWYRQKHYLHLPYQDDFCGPTQPESGLVQ-------------FLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV 933 S CWVF H+ K GG TV+ M+ + G ++D +W G + NF VK T+ GGYTE LR + D C++FT+FRHP++R+VSAYFYC+ D CA+ V+DA VDLLTFA+HWGN+ +RQFAL + ++ V + + + Q I WY+ K YL P + D+ P Q E+ V+ L A + + + Y AVGI+E+W+ ++ LF+ L + W +F + GK+ SE LK AW ELKK++ LD+LLY+HA+ V Q G++ Sbjct: 152 SPDQCWVFMHLQKCGGSTVKYMLR---RSYGSRYSIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGV-QEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESE-TLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGLL 461
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI) HSP 1 Score: 196 bits (498), Expect = 2.640e-56 Identity = 115/320 (35.94%), Postives = 169/320 (52.81%), Query Frame = 1 Query: 34 ELKPTSKRDCWVFSHMNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENFVKENAV-----FTYGGYTEGLRMY------DDRD-CKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDV--------CIPAWYRQKHYLHLPYQDDFCGPTQPESGLVQFL-SSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 930 E P S+ CW+F+H+ K+GG TV+ ++ G + +D +W G+ YAE+ A GGY E LR D+R C+WFTVFRHPVSR+VSAY+YC+ DQLCA+ + + VDL+TFA HWGN+ LRQFAL + HDKV +F G G + +P WY K L L + T PE ++++ + L YA VGI+E+W+ ++ LF+ L++ W +EF++SGK N ++F+ + L+ A PE+ K + LD+ LY A+ + Q GI Sbjct: 79 EDSPRSENRCWIFNHLQKAGGTTVKRLLFD---SWGSESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVS-----HDKV-KDFLVSPNGGGAMGLTAEQVELMPGWYMLK--LFLNDRSGVADDTSPEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVD-TRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE) HSP 1 Score: 193 bits (490), Expect = 5.240e-56 Identity = 109/305 (35.74%), Postives = 157/305 (51.48%), Query Frame = 1 Query: 61 CWVFSHMNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENFVKENAVFTYGGYTEGLRMYDD-RDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDVCIPAWYRQKHYLHLPYQDDFCGPTQPESG--------------LVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 930 CWV++ MNK+GG ++R MI + + G F ++++G + + +G YTEGLR Y CKWFT+ RHP++R+VSA+ YC DQLCA + D+ FAEHWGN+G+ QFALA D+ +V S P WY+ K Y + GP+ S + + L +E L ++YAAVGI+E+W+ SM LF+ L L F+W S RN S+ A L A+ P LK+ +WLDILLY+HA SVH++Q++ G+ Sbjct: 37 CWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGDRGVQQILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEVKS--------------PPWYKAKLYF-----EGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDSK---AKNDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE) HSP 1 Score: 188 bits (478), Expect = 3.420e-54 Identity = 99/294 (33.67%), Postives = 150/294 (51.02%), Query Frame = 1 Query: 61 CWVFSHMNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDVCIPAWYRQKHYLH--LPYQDDFCGPTQPESG-------LVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQV 915 CWVF+H NK+GG TV+ + + + + + L ++ G ++ + + V GGY EGLR + CKWFT+ RHP++R++SA++YC DQLCAA + D+ FA+HWGNY L QFAL + ++F + +V PAW++ K Y L Y + T + + L +E L + YAAVGI+E W SM LF+ L + F+W R S E + L AA P L++++WLD+LLY++A S+H Q+ Sbjct: 37 CWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYARGDKGIQDLLNDKPVLIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAE--------------EVDAPAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIVE--KKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQL 314
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI) HSP 1 Score: 189 bits (480), Expect = 5.230e-53 Identity = 110/320 (34.38%), Postives = 171/320 (53.44%), Query Frame = 1 Query: 43 PTSKRDCWVFSHMNKSGGMTVRMMIMPFLKEK-GVSTGLFDDIEWSSGRSYAENFVKENAV-----FTYGGYTEGLRMYDD--RDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDVCIPAWYRQKHYLHLPYQDD--FCGPTQ-----------PESGLVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSG--GSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV 933 P S CWVF H+ K GG TV+ + L+++ G ++D + W G ++ F + A+ GGYTE LR+ + C++FT+FRHP++R+VSAYFYC+ + D CA+ V+ A VDLLTFA+HWGN+ LRQFAL + ++DV Y+ K YL P ++D G + P++ L + L A + + Y AVGI+E+W+ ++ LF+ L++ +W ++F +SGK + Q E + L+ AW ELKK++ LD+LLY+HA+ V Q G++ Sbjct: 171 PASPGQCWVFMHLQKCGGSTVKDL----LEDRWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE----------------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIET---LQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGLL 461
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE) HSP 1 Score: 177 bits (449), Expect = 5.460e-51 Identity = 94/222 (42.34%), Postives = 129/222 (58.11%), Query Frame = 1 Query: 292 FRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGD--VCIPAWYRQKHYLHLPYQDDFCGPTQPESG------LVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV 933 ++ P+ R+VSAYFYC++ D+LCA++VL A DL TFA+HWGNYGLRQF+LA + AEDVF +Q RG V P WYR K Y + + E+G + L ++ LS Y+AVGI+E+W+ SM LFN+ L + F+W + G++N + AL+AAW P L K +WLDI LYDHA++VH QV + GIV Sbjct: 18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFA-------AEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVD-KRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGIV 231
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE) HSP 1 Score: 166 bits (420), Expect = 1.240e-43 Identity = 93/292 (31.85%), Postives = 146/292 (50.00%), Query Frame = 1 Query: 61 CWVFSHMNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDVCIPAWYRQKHYLHLPYQDDFCGPTQPESGLVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSG--KRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 930 CW+F HM+KSG R + ++ + +FD ++W G +A + + + +GG E LR + +R CKW T+FRHP++R++SAY +C A D +C L+ FAE WGN+ +RQFAL S+ V E+ Q + + WY K YL G + L L + LST+YAAVGI +E + +M LF++ L++ DW + G + S+++ A + A +P + + LD+ LY+HA+ V + QVA GI Sbjct: 273 CWIFMHMDKSGASGARRVATERWRKDEL---VFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRNHKERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCPPT----ESTGLVVFAELWGNFAMRQFALESVSPS------AVKEWAAQRQARTGTSM--WYLVKEYLAR-------GGIAEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGINEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGI 542
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI) HSP 1 Score: 146 bits (368), Expect = 1.650e-38 Identity = 88/286 (30.77%), Postives = 138/286 (48.25%), Query Frame = 1 Query: 79 MNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDVCIPAWYRQKHYLHLPYQDDFCGPTQPESGLVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSG--KRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 930 M+KSG R + ++ + +FD ++W G +A + + +GG E LR + R CKW T+FRHP++R++SAY +C A D +C L FAE WGN+ +RQFALA++ V E+ Q + + WY K YL G + L L + LST+YAAVGI +E +M LF++ L++ DW + G + + S+++ + A +P + + LD+ LY+HA+ V + QVA GI Sbjct: 1 MDKSGASGARRVATEQWRKDEL---VFDTVQWRRGDGFAADVMASRWKLLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPPT----ESTGLAAFAELWGNFAMRQFALAAVSPS------AVKEWAAQRQARTGTSM--WYLVKEYLAR-------GGIAEDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 264 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10978.877.1 >prot_L-elsbetiae_contig10978.877.1 ID=prot_L-elsbetiae_contig10978.877.1|Name=mRNA_L-elsbetiae_contig10978.877.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=312bp MNSTNPVQGARELKPTSKRDCWVFSHMNKSGGMTVRMMIMPFLKEKGVSTback to top mRNA from alignment at L-elsbetiae_contig10978:1764..3004+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10978.877.1 ID=mRNA_L-elsbetiae_contig10978.877.1|Name=mRNA_L-elsbetiae_contig10978.877.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1241bp|location=Sequence derived from alignment at L-elsbetiae_contig10978:1764..3004+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10978:1764..3004+ >mRNA_L-elsbetiae_contig10978.877.1 ID=mRNA_L-elsbetiae_contig10978.877.1|Name=mRNA_L-elsbetiae_contig10978.877.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1872bp|location=Sequence derived from alignment at L-elsbetiae_contig10978:1764..3004+ (Laminarionema elsbetiae ELsaHSoW15)back to top |