mRNA_L-elsbetiae_contig10978.877.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10978.877.1
Unique NamemRNA_L-elsbetiae_contig10978.877.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE)

HSP 1 Score: 622 bits (1605), Expect = 8.000e-225
Identity = 296/311 (95.18%), Postives = 302/311 (97.11%), Query Frame = 1
Query:    1 MNSTNPVQGARELKPTSKRDCWVFSHMNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDVCIPAWYRQKHYLHLPYQDDFCGPTQPESGLVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV 933
            MNSTNPVQGA+ELKPTSK DCWVFSHMNKSGGMTVR MIMPFL EKGVST LFDDIEWSSGRSYAE FVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRA HDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFH++VVSEFCQQARGHGDVCIPAWYRQKHYLHLP+QDDFCGPTQPESGL QFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNL RFDWVKEFQKSGK+NSGGSQFETAS+ ALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV
Sbjct:   32 MNSTNPVQGAQELKPTSKCDCWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRSYAETFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLHLPHQDDFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV 342          
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 3.960e-75
Identity = 125/303 (41.25%), Postives = 179/303 (59.08%), Query Frame = 1
Query:   79 MNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENFVKENAVFTYGGYTEGLRMYDD---RDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASK--VDLLTFAEHWGNYGLRQFALASIKAEDVFHDKV---VSEFCQQARGHGDVCIPAWYRQKHYLHLPYQDD--------FCGPTQPESG---LVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 930
            MNK+GG TV+ M+ P+ K + V+ GL+D  +W  G+ +A++F+ +     +G YTEGLR +     R+CKWFT+FRHP+ R+VSAYFYC++   D LCA V LDA+    DL  FAEHWG++GLRQFALA +  E++  +KV    +  C     HG    P WY  K YL     +         + G     SG   +   L   QE L+  YAAVG++E+W+ S+ LFN  L +  FDW + F   GK+NS G+     +E  L++ W  P L++++ LD+LLYD+A+SVH  QV   G+
Sbjct:    1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFAQDFLGDENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPY--HGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRS-WTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300          
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 3.620e-58
Identity = 116/315 (36.83%), Postives = 169/315 (53.65%), Query Frame = 1
Query:   49 SKRDCWVFSHMNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENF-VKENAVFTY----GGYTEGLRMYD--DRDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDVCIPAWYRQKHYLHLPYQDDFCGPTQPESGLVQ-------------FLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV 933
            S   CWVF H+ K GG TV+ M+    +  G    ++D  +W  G   + NF VK     T+    GGYTE LR  +  D  C++FT+FRHP++R+VSAYFYC+    D  CA+ V+DA  VDLLTFA+HWGN+ +RQFAL  + ++ V  + + +   Q         I  WY+ K YL  P + D+  P Q E+  V+              L  A + + + Y AVGI+E+W+ ++ LF+  L +    W  +F + GK+          SE  LK AW   ELKK++ LD+LLY+HA+ V   Q    G++
Sbjct:  152 SPDQCWVFMHLQKCGGSTVKYMLR---RSYGSRYSIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGV-QEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESE-TLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGLL 461          
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 2.640e-56
Identity = 115/320 (35.94%), Postives = 169/320 (52.81%), Query Frame = 1
Query:   34 ELKPTSKRDCWVFSHMNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENFVKENAV-----FTYGGYTEGLRMY------DDRD-CKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDV--------CIPAWYRQKHYLHLPYQDDFCGPTQPESGLVQFL-SSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 930
            E  P S+  CW+F+H+ K+GG TV+ ++       G  +  +D  +W  G+ YAE+     A         GGY E LR        D+R  C+WFTVFRHPVSR+VSAY+YC+    DQLCA+  + +  VDL+TFA HWGN+ LRQFAL  +      HDKV  +F     G G +         +P WY  K  L L  +      T PE   ++++     + L   YA VGI+E+W+ ++ LF+  L++    W +EF++SGK N   ++F+   +  L+ A   PE+ K + LD+ LY  A+ +   Q    GI
Sbjct:   79 EDSPRSENRCWIFNHLQKAGGTTVKRLLFD---SWGSESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVS-----HDKV-KDFLVSPNGGGAMGLTAEQVELMPGWYMLK--LFLNDRSGVADDTSPEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVD-TRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386          
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 5.240e-56
Identity = 109/305 (35.74%), Postives = 157/305 (51.48%), Query Frame = 1
Query:   61 CWVFSHMNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENFVKENAVFTYGGYTEGLRMYDD-RDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDVCIPAWYRQKHYLHLPYQDDFCGPTQPESG--------------LVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 930
            CWV++ MNK+GG ++R MI  +      + G F   ++++G    +  +       +G YTEGLR Y     CKWFT+ RHP++R+VSA+ YC     DQLCA  +      D+  FAEHWGN+G+ QFALA     D+   +V S              P WY+ K Y      +   GP+   S               + + L   +E L ++YAAVGI+E+W+ SM LF+  L L  F+W      S  RN   S+   A    L A+   P LK+ +WLDILLY+HA SVH++Q++  G+
Sbjct:   37 CWVYTDMNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGDRGVQQILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEVKS--------------PPWYKAKLYF-----EGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDSK---AKNDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319          
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 3.420e-54
Identity = 99/294 (33.67%), Postives = 150/294 (51.02%), Query Frame = 1
Query:   61 CWVFSHMNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDVCIPAWYRQKHYLH--LPYQDDFCGPTQPESG-------LVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQV 915
            CWVF+H NK+GG TV+  +  + + +  +  L     ++ G    ++ + +  V   GGY EGLR    + CKWFT+ RHP++R++SA++YC     DQLCAA +      D+  FA+HWGNY L QFAL  +   ++F +              +V  PAW++ K Y    L Y  +    T   +        +   L   +E L + YAAVGI+E W  SM LF+  L +  F+W         R S     E   +  L AA   P L++++WLD+LLY++A S+H  Q+
Sbjct:   37 CWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYARGDKGIQDLLNDKPVLIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAE--------------EVDAPAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIVE--KKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQL 314          
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 5.230e-53
Identity = 110/320 (34.38%), Postives = 171/320 (53.44%), Query Frame = 1
Query:   43 PTSKRDCWVFSHMNKSGGMTVRMMIMPFLKEK-GVSTGLFDDIEWSSGRSYAENFVKENAV-----FTYGGYTEGLRMYDD--RDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDVCIPAWYRQKHYLHLPYQDD--FCGPTQ-----------PESGLVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSG--GSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV 933
            P S   CWVF H+ K GG TV+ +    L+++ G    ++D + W  G  ++  F  + A+        GGYTE LR+ +     C++FT+FRHP++R+VSAYFYC+  + D  CA+ V+ A  VDLLTFA+HWGN+ LRQFAL  + ++DV                        Y+ K YL  P ++D    G  +           P++ L + L  A + +   Y AVGI+E+W+ ++ LF+  L++   +W ++F +SGK +      Q E  +   L+ AW   ELKK++ LD+LLY+HA+ V   Q    G++
Sbjct:  171 PASPGQCWVFMHLQKCGGSTVKDL----LEDRWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE----------------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIET---LQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGLL 461          
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 5.460e-51
Identity = 94/222 (42.34%), Postives = 129/222 (58.11%), Query Frame = 1
Query:  292 FRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGD--VCIPAWYRQKHYLHLPYQDDFCGPTQPESG------LVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSGKRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV 933
            ++ P+ R+VSAYFYC++   D+LCA++VL A   DL TFA+HWGNYGLRQF+LA + AEDVF         +Q RG     V  P WYR K Y    +  +       E+G      +   L   ++ LS  Y+AVGI+E+W+ SM LFN+ L +  F+W    +  G++N    +       AL+AAW  P L K +WLDI LYDHA++VH  QV + GIV
Sbjct:   18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFA-------AEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVD-KRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGIV 231          
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 1.240e-43
Identity = 93/292 (31.85%), Postives = 146/292 (50.00%), Query Frame = 1
Query:   61 CWVFSHMNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDVCIPAWYRQKHYLHLPYQDDFCGPTQPESGLVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSG--KRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 930
            CW+F HM+KSG    R +     ++  +   +FD ++W  G  +A + +  +    +GG  E LR + +R CKW T+FRHP++R++SAY +C  A  D +C           L+ FAE WGN+ +RQFAL S+          V E+  Q +      +  WY  K YL         G    +  L   L   +  LST+YAAVGI +E + +M LF++ L++   DW   +   G  +     S+++ A     + A  +P +   + LD+ LY+HA+ V + QVA  GI
Sbjct:  273 CWIFMHMDKSGASGARRVATERWRKDEL---VFDTVQWRRGDGFAADVMASHWKLLHGGCVESLRNHKERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCPPT----ESTGLVVFAELWGNFAMRQFALESVSPS------AVKEWAAQRQARTGTSM--WYLVKEYLAR-------GGIAEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGINEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGI 542          
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 1.650e-38
Identity = 88/286 (30.77%), Postives = 138/286 (48.25%), Query Frame = 1
Query:   79 MNKSGGMTVRMMIMPFLKEKGVSTGLFDDIEWSSGRSYAENFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHDKVVSEFCQQARGHGDVCIPAWYRQKHYLHLPYQDDFCGPTQPESGLVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWVKEFQKSG--KRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 930
            M+KSG    R +     ++  +   +FD ++W  G  +A + +       +GG  E LR +  R CKW T+FRHP++R++SAY +C  A  D +C           L  FAE WGN+ +RQFALA++          V E+  Q +      +  WY  K YL         G    +  L   L   +  LST+YAAVGI +E   +M LF++ L++   DW   +   G  + +   S+++       + A  +P +   + LD+ LY+HA+ V + QVA  GI
Sbjct:    1 MDKSGASGARRVATEQWRKDEL---VFDTVQWRRGDGFAADVMASRWKLLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPPT----ESTGLAAFAELWGNFAMRQFALAAVSPS------AVKEWAAQRQARTGTSM--WYLVKEYLAR-------GGIAEDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 264          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10978.877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JY77_9PHAE8.000e-22595.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS84_ECTSI3.960e-7541.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FWQ3_ECTSI3.620e-5836.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G715_ECTSI2.640e-5635.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQY7_9PHAE5.240e-5635.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNJ0_9PHAE3.420e-5433.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G716_ECTSI5.230e-5334.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L061_9PHAE5.460e-5142.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM0_9PHAE1.240e-4331.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU75_ECTSI1.650e-3830.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10978contigL-elsbetiae_contig10978:1764..3004 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score203.8
Seed ortholog evalue1.2e-49
Seed eggNOG ortholog2880.D7FWQ3
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size936
Cds size936
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815313.8520684-CDS-L-elsbetiae_contig10978:1763..20621622815313.8520684-CDS-L-elsbetiae_contig10978:1763..2062Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10978 1764..2062 +
1691682832.4652436-CDS-L-elsbetiae_contig10978:1763..20621691682832.4652436-CDS-L-elsbetiae_contig10978:1763..2062Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10978 1764..2062 +
1622815313.861599-CDS-L-elsbetiae_contig10978:2367..30041622815313.861599-CDS-L-elsbetiae_contig10978:2367..3004Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10978 2368..3004 +
1691682832.4750092-CDS-L-elsbetiae_contig10978:2367..30041691682832.4750092-CDS-L-elsbetiae_contig10978:2367..3004Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10978 2368..3004 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10978.877.1prot_L-elsbetiae_contig10978.877.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10978 1764..3004 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10978.877.1

>prot_L-elsbetiae_contig10978.877.1 ID=prot_L-elsbetiae_contig10978.877.1|Name=mRNA_L-elsbetiae_contig10978.877.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=312bp
MNSTNPVQGARELKPTSKRDCWVFSHMNKSGGMTVRMMIMPFLKEKGVST
GLFDDIEWSSGRSYAENFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRH
PVSRVVSAYFYCQRATHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFAL
ASIKAEDVFHDKVVSEFCQQARGHGDVCIPAWYRQKHYLHLPYQDDFCGP
TQPESGLVQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLWRFDWV
KEFQKSGKRNSGGSQFETASERALKAAWHSPELKKFIWLDILLYDHALSV
HRSQVADLGIV*
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mRNA from alignment at L-elsbetiae_contig10978:1764..3004+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10978.877.1 ID=mRNA_L-elsbetiae_contig10978.877.1|Name=mRNA_L-elsbetiae_contig10978.877.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1241bp|location=Sequence derived from alignment at L-elsbetiae_contig10978:1764..3004+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACAGCACCAACCCAGTGCAAGGCGCACGAGAGTTGAAACCGACCTC GAAGCGCGACTGCTGGGTGTTCAGCCACATGAATAAGTCCGGCGGCATGA CTGTCCGGATGATGATCATGCCCTTCTTAAAGGAGAAGGGCGTGTCAACT GGATTGTTCGACGACATAGAGTGGTCCTCCGGCCGGAGCTACGCGGAAAA CTTCGTCAAGGAAAACGCAGTGTTTACTTACGGCGGGTACACCGAAGGAC TCCGGATGTACGACGATCGGGACTGCAAGTGGTTTACCGTTTTCCGACAG TGAGTATCGAACCGACGACCAGTTCAAAAAAGGACTTTCGGCTCCATGTG TGGTACTGTTTATTGCCATTAGAATGAAAAACGCATAGAAGCATACATAC TTACGATCAGCCTTTTCGTTTCGATTTTCATCGAGCTCATCTCGATCTCA CTCTATATGTAAATTGCTGTACGGCATCGTAGCGCGTGGTTCTATCTATA AAGATAGCTCAATTGAAGCACCACCCTCCATGTGTGCAATAAACCACCGA TACTATTATTCCACGTTGTCTCCATCCCCGACCGTATTGTTTCGTATTTT CCAGCCCTGTCTCCCGCGTCGTGAGCGCGTACTTTTACTGCCAAAGGGCC ACTCACGACCAGCTGTGCGCGGCAGTAGTGCTGGATGCGAGCAAGGTCGA CCTCCTCACGTTCGCCGAGCATTGGGGCAACTACGGTCTGCGGCAATTCG CGCTGGCTTCCATCAAGGCAGAAGACGTGTTTCACGACAAGGTCGTCAGC GAGTTTTGCCAGCAAGCGCGCGGTCACGGGGATGTTTGCATCCCGGCATG GTACCGGCAAAAGCATTATCTGCACCTGCCATACCAAGACGATTTTTGTG GGCCGACACAACCAGAGTCTGGACTAGTTCAGTTCCTTTCGAGCGCGCAG GAGACTCTGAGCACCCGGTATGCCGCAGTGGGGATAATTGAGGAGTGGGA CAACAGCATGGAGCTCTTCAACAGGGTGCTGAATCTGTGGCGGTTCGATT GGGTCAAGGAGTTTCAGAAGTCGGGCAAAAGAAACAGTGGAGGTTCGCAG TTCGAAACCGCCTCAGAGAGAGCACTCAAGGCCGCCTGGCATAGCCCAGA GTTGAAAAAGTTCATTTGGCTAGACATTCTTTTGTATGACCACGCCCTTT CAGTGCACCGAAGCCAGGTTGCCGATCTTGGCATTGTGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10978:1764..3004+

>mRNA_L-elsbetiae_contig10978.877.1 ID=mRNA_L-elsbetiae_contig10978.877.1|Name=mRNA_L-elsbetiae_contig10978.877.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1872bp|location=Sequence derived from alignment at L-elsbetiae_contig10978:1764..3004+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACAGCACCAACCCAGTGCAAGGCGCACGAGAGTTGAAACCGACCTC
GAAGCGCGACTGCTGGGTGTTCAGCCACATGAATAAGTCCGGCGGCATGA
CTGTCCGGATGATGATCATGCCCTTCTTAAAGGAGAAGGGCGTGTCAACT
GGATTGTTCGACGACATAGAGTGGTCCTCCGGCCGGAGCTACGCGGAAAA
CTTCGTCAAGGAAAACGCAGTGTTTACTTACGGCGGGTACACCGAAGGAC
TCCGGATGTACGACGATCGGGACTGCAAGTGGTTTACCGTTTTCCGACAA
TGAACAGCACCAACCCAGTGCAAGGCGCACGAGAGTTGAAACCGACCTCG
AAGCGCGACTGCTGGGTGTTCAGCCACATGAATAAGTCCGGCGGCATGAC
TGTCCGGATGATGATCATGCCCTTCTTAAAGGAGAAGGGCGTGTCAACTG
GATTGTTCGACGACATAGAGTGGTCCTCCGGCCGGAGCTACGCGGAAAAC
TTCGTCAAGGAAAACGCAGTGTTTACTTACGGCGGGTACACCGAAGGACT
CCGGATGTACGACGATCGGGACTGCAAGTGGTTTACCGTTTTCCGACACC
CTGTCTCCCGCGTCGTGAGCGCGTACTTTTACTGCCAAAGGGCCACTCAC
GACCAGCTGTGCGCGGCAGTAGTGCTGGATGCGAGCAAGGTCGACCTCCT
CACGTTCGCCGAGCATTGGGGCAACTACGGTCTGCGGCAATTCGCGCTGG
CTTCCATCAAGGCAGAAGACGTGTTTCACGACAAGGTCGTCAGCGAGTTT
TGCCAGCAAGCGCGCGGTCACGGGGATGTTTGCATCCCGGCATGGTACCG
GCAAAAGCATTATCTGCACCTGCCATACCAAGACGATTTTTGTGGGCCGA
CACAACCAGAGTCTGGACTAGTTCAGTTCCTTTCGAGCGCGCAGGAGACT
CTGAGCACCCGGTATGCCGCAGTGGGGATAATTGAGGAGTGGGACAACAG
CATGGAGCTCTTCAACAGGGTGCTGAATCTGTGGCGGTTCGATTGGGTCA
AGGAGTTTCAGAAGTCGGGCAAAAGAAACAGTGGAGGTTCGCAGTTCGAA
ACCGCCTCAGAGAGAGCACTCAAGGCCGCCTGGCATAGCCCAGAGTTGAA
AAAGTTCATTTGGCTAGACATTCTTTTGTATGACCACGCCCTTTCAGTGC
ACCGAAGCCAGGTTGCCGATCTTGGCATTGTGTGACCCTGTCTCCCGCGT
CGTGAGCGCGTACTTTTACTGCCAAAGGGCCACTCACGACCAGCTGTGCG
CGGCAGTAGTGCTGGATGCGAGCAAGGTCGACCTCCTCACGTTCGCCGAG
CATTGGGGCAACTACGGTCTGCGGCAATTCGCGCTGGCTTCCATCAAGGC
AGAAGACGTGTTTCACGACAAGGTCGTCAGCGAGTTTTGCCAGCAAGCGC
GCGGTCACGGGGATGTTTGCATCCCGGCATGGTACCGGCAAAAGCATTAT
CTGCACCTGCCATACCAAGACGATTTTTGTGGGCCGACACAACCAGAGTC
TGGACTAGTTCAGTTCCTTTCGAGCGCGCAGGAGACTCTGAGCACCCGGT
ATGCCGCAGTGGGGATAATTGAGGAGTGGGACAACAGCATGGAGCTCTTC
AACAGGGTGCTGAATCTGTGGCGGTTCGATTGGGTCAAGGAGTTTCAGAA
GTCGGGCAAAAGAAACAGTGGAGGTTCGCAGTTCGAAACCGCCTCAGAGA
GAGCACTCAAGGCCGCCTGGCATAGCCCAGAGTTGAAAAAGTTCATTTGG
CTAGACATTCTTTTGTATGACCACGCCCTTTCAGTGCACCGAAGCCAGGT
TGCCGATCTTGGCATTGTGTGA
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