mRNA_L-elsbetiae_contig10950.857.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10950.857.1
Unique NamemRNA_L-elsbetiae_contig10950.857.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10950.857.1 vs. uniprot
Match: D7G5Y3_ECTSI (Heat shock protein 40 like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y3_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 3.400e-30
Identity = 70/124 (56.45%), Postives = 84/124 (67.74%), Query Frame = 1
Query:    4 ADDAYRSGLYEPAVMLYSQAIRMADQQDIEKRACLFANRAAALMNLGRDADAVRDCKEALRLKPEYPRVLLRKGRLHARLDQWELAIEALSTCLHSATALHAQVRDAAAELEQCWRSQRDDQDD 375
            A  AY S  Y  A  LYS+AI + D QD    A LFANRAAALMNL R+ DA++DC EALRLKP YP+VLLRK RLH RL QW+LAI+   T  +S   LH+   +AA+EL+QC  SQR   D+
Sbjct:  149 AGKAYASNRYRLAHELYSEAICV-DPQDYYTNALLFANRAAALMNLARNKDALKDCIEALRLKPNYPKVLLRKARLHKRLSQWDLAIKDYETYRNSVGVLHSTWEEAASELDQCRLSQRRANDE 271          
BLAST of mRNA_L-elsbetiae_contig10950.857.1 vs. uniprot
Match: G0SHI5_CHATD (J domain-containing protein n=1 Tax=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) TaxID=759272 RepID=G0SHI5_CHATD)

HSP 1 Score: 89.0 bits (219), Expect = 3.320e-17
Identity = 56/179 (31.28%), Postives = 93/179 (51.96%), Query Frame = 1
Query:   16 YRSGLYEPAVMLYSQAIRMADQQDIEKRACLFANRAAALMNLGRDADAVRDCKEALRLKPEYPRVLLRKGRLHARLDQWELAI---EALSTCLHSATALHAQVRDAAAELEQCWRSQRDDQDDIYSIGHYATLGVRFSATAREVKVAHRNLVLEHHPDKNQGDPSSVERFRAIQAAYEV 543
            Y++G ++ A   YS A+ + D  +    + ++ NRA   + L +  +A+ DC++A+ L P Y +    K       ++WE  +   + +         +  +VR A  EL+   +SQR D        +Y  LGV  +AT +E+K A+R L ++HHPDKN GDP++  RF+ I  AYE 
Sbjct:  627 YKAGRWQDAFNTYSAALEV-DPTNKGTNSKIYQNRALCRIKLKQYEEAIADCEKAISLDPSYIKARKTKATALGLAEKWEACVREWKQIQELDPEDRNVAREVRKAELELK---KSQRKD--------YYKILGVEKNATEQEIKKAYRKLAIQHHPDKNPGDPNAEARFKDISEAYET 793          
BLAST of mRNA_L-elsbetiae_contig10950.857.1 vs. uniprot
Match: UPI00083C5CCF (dnaJ homolog subfamily C member 7 n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C5CCF)

HSP 1 Score: 79.0 bits (193), Expect = 8.470e-14
Identity = 53/190 (27.89%), Postives = 97/190 (51.05%), Query Frame = 1
Query:    7 DDAYRSGLYEPAVMLYSQAIRMADQQDIEKRACLFANRAAALMNLGRDADAVRDCKEALRLKPEYPRVLLRKGRLHARLDQWELAIEALSTCLHSATALHAQVRDAAAELEQCWRSQRDDQDDIYSI------GHYATLGVRFSATAREVKVAHRNLVLEHHPDKNQGDPSSVER-----FRAIQAAYEV 543
            ++AY++G +  A  LYS+A+ + D  + +  A L+ NRA  L  LG++ADA+ DC  AL+L  +Y + LL++ + +     +E A+                  + A ++E+   ++R  QD  +++       +Y  LGV  +A+  E+K A+R   L HHPD++     + ++     F+ +  AY V
Sbjct:  262 NEAYKTGKHSEAHALYSEALTI-DPMNKKTNAKLYFNRALVLTKLGKNADAISDCTNALKLDEKYLKALLKRAKCYMDSGDYEEAVRDY---------------EQACKMEKSRENKRLLQDAKFALKKSKRKDYYKILGVEKNASEDEIKKAYRKRALVHHPDRHASASEAEKKEQEKKFKELGEAYSV 435          
BLAST of mRNA_L-elsbetiae_contig10950.857.1 vs. uniprot
Match: A0A7N0VCQ3_KALFE (J domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0VCQ3_KALFE)

HSP 1 Score: 75.9 bits (185), Expect = 9.800e-13
Identity = 57/182 (31.32%), Postives = 87/182 (47.80%), Query Frame = 1
Query:    4 ADDAYRSGLYEPAVMLYSQAIRMADQQDIEKRACLFANRAAALMNLGRDADAVRDCKEALRLKPEYPRVLLRKGRLHARLDQWELAIEALSTCLHSATA-LHAQVRDAAAELEQCWRSQRDDQDDIYSIGHYATLGVRFSATAREVKVAHRNLVLEHHPDKNQGDPSSVE-RFRAIQAAYEV 543
            A+D    G    AV  Y  A+ M D         L+       + LGR A+A+  C EAL +  +    L+++G     L+ WE A+E L T   S+   +H  +R+     E+  +  +  + D Y I     L +  +A+  E+K A++ L L+ HPDKNQ +    E +FR I AAYEV
Sbjct:  259 AEDNAEKGKLRVAVEDYKAALAM-DPNHSAHNVHLYLGLCKLQVKLGRGAEALTSCTEALNIDADLLEALVQRGEAKLLLEDWEGAVEDLKTAAQSSPQDMH--IREVLMRAEKALKMSK--RKDWYKI-----LEISKTASIAEIKRAYKKLALQWHPDKNQDNREEAENKFREIAAAYEV 430          
BLAST of mRNA_L-elsbetiae_contig10950.857.1 vs. uniprot
Match: A0A433D7B3_9FUNG (J domain-containing protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433D7B3_9FUNG)

HSP 1 Score: 74.7 bits (182), Expect = 1.830e-12
Identity = 53/177 (29.94%), Postives = 79/177 (44.63%), Query Frame = 1
Query:   13 AYRSGLYEPAVMLYSQAIRMADQQDIEKRACLFANRAAALMNLGRDADAVRDCKEALRLKPEYPRVLLRKGRLHARLDQWELAIEALSTCLHSATALHAQVRDAAAELEQCWRSQRDDQDDIYSIGHYATLGVRFSATAREVKVAHRNLVLEHHPDKNQGDPSSVERFRAIQAAYEV 543
            A+ +  +  A  LY+ A+ + D  + E  A L+ANRAAA   LGR A+A++DC  AL+L P Y +V                        +          +      E   +SQ  D         Y  L V  + +A ++K A++ L L+HHPDKN GD  +  RF+ I  AY +
Sbjct:   75 AFSANRFGEACDLYTDALDI-DPDNKEINARLYANRAAARFQLGRYAEAIKDCGAALKLDPNYTKVXXXXXXXXXXXXXXXXXXXXXXLAIEKDNGNREYQQKLWEAKEALKQSQIKD--------FYQVLDVARNCSAADIKRAYKRLALQHHPDKNDGDRRAEARFKMIGEAYTI 242          
BLAST of mRNA_L-elsbetiae_contig10950.857.1 vs. uniprot
Match: F0ZYA8_DICPU (J domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZYA8_DICPU)

HSP 1 Score: 72.4 bits (176), Expect = 1.270e-11
Identity = 52/187 (27.81%), Postives = 97/187 (51.87%), Query Frame = 1
Query:    7 DDAYRSGLYEPAVMLYSQAIRMADQQDIEKRACLFANRAAALMNLGRDADAVRDCKEALRLKPEYPRVLLRKGRLHARLDQWELAI---EALSTCLHSATALHAQVRDAAAELEQCWRSQRDDQDDIYSIGHYATLGVRFSATAREVKVAHRNLVLEHHPDKN-----QGDPSSVERFRAIQAAYEV 543
            ++A+ +  Y+ A   +++A+ + D +     + L+ANRAAA +NL +  +A+ DC  A+ + P Y +  +R+ + + + + ++ A+   E   +       LH  V++A   L+   +S + D        +Y  LGV  +AT  E+K A+R L L++HPDKN     +    + + F+ I  AY V
Sbjct:   87 NEAFVAKNYQQAYDSFTEALTI-DPKLETMNSQLYANRAAAALNLNKLKEAIEDCTSAIDIDPNYSKAYIRRAQCYMKQESFDDAVRDYEKAQSLDPENGDLHRNVKEAKIALK---KSLKKD--------YYKILGVDKAATDNEIKKAYRKLALQYHPDKNSTLSDEEKAQAEKMFKDIGEAYSV 261          
BLAST of mRNA_L-elsbetiae_contig10950.857.1 vs. uniprot
Match: A0A1X7UD64_AMPQE (J domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UD64_AMPQE)

HSP 1 Score: 70.1 bits (170), Expect = 9.950e-11
Identity = 53/184 (28.80%), Postives = 89/184 (48.37%), Query Frame = 1
Query:   13 AYRSGLYEPAVMLYSQAIRMADQQDIEKRACLFANRAAALMNLGRDADAVRDCKEALRLKPEYPRVLLRKGRLHARLDQWELAIEALSTC--LHSATALHAQVRDAAAELEQCWRSQRDDQDDIYSIGHYATLGVRFSATAREVKVAHRNLVLEHHPDKNQ-GDPSSVE----RFRAIQAAYEV 543
            AY+SG Y+ A  +YS A+++ D  +    A L+ NRA A   LG+  +++ DC +A+ L  +Y +   R+   +   +Q E  +        L S +     ++DA  +L+    SQR D        +Y  LG+   A   ++K A+R   L HHPD++   +P   E    +F+ +  AY V
Sbjct:  273 AYKSGSYQEAYEIYSDALQI-DPYNRATNAKLYCNRALASQKLGKLTESIDDCTQAIELDEKYVKAYQRRATSYQLNEQHEECVRDWKKVMELDSTSENKRALKDAEKKLKM---SQRKD--------YYKILGIEKDANDDQIKKAYRKKALLHHPDRHSTAEPEVREAEEVKFKDVSEAYSV 444          
BLAST of mRNA_L-elsbetiae_contig10950.857.1 vs. uniprot
Match: UPI001EE598FC (dnaJ homolog subfamily C member 7-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE598FC)

HSP 1 Score: 67.8 bits (164), Expect = 6.180e-10
Identity = 50/184 (27.17%), Postives = 90/184 (48.91%), Query Frame = 1
Query:   13 AYRSGLYEPAVMLYSQAIRMADQQDIEKRACLFANRAAALMNLGRDADAVRDCKEALRLKPEYPRVLLRKGRLHARLDQWELAIEALSTCLHSATALHAQ--VRDAAAELEQCWRSQRDDQDDIYSIGHYATLGVRFSATAREVKVAHRNLVLEHHPDKNQGDPSSVER-----FRAIQAAYEV 543
            A+RSG Y+ A  LYS+A+ + D  +    + L+ NRA     L +   ++ +C +A+ L   Y +  LR+ + +   +Q++ A+               +  +++A  EL+   +S+R D        +Y  LG+  SAT  E+K A+R   L HHPD++  D +  ++     F+ +  AY V
Sbjct:  269 AFRSGKYDEAYNLYSEALAI-DSNNKFTNSKLYFNRATVCSKLHKLDQSIENCSKAVELDDSYLKAYLRRAKCYMETEQYQEAVCDYEKIFKMDKTKENKRLLQEAKLELK---KSKRKD--------YYKILGINKSATEDEIKKAYRKRALIHHPDRHSHDTTEKQKEEEKKFKELGEAYGV 440          
BLAST of mRNA_L-elsbetiae_contig10950.857.1 vs. uniprot
Match: A0A087T0P5_STEMI (Tetratricopeptide repeat protein 1 (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087T0P5_STEMI)

HSP 1 Score: 65.5 bits (158), Expect = 1.820e-9
Identity = 37/110 (33.64%), Postives = 64/110 (58.18%), Query Frame = 1
Query:    7 DDAYRSGLYEPAVMLYSQAIRMADQQDIEKRACLFANRAAALMNLGRDADAVRDCKEALRLKPEYPRVLLRKGRLHARLDQWELAIEALSTCLHSATALHAQVRDAAAEL 336
            ++ ++   YE AV LY+ A+     +   +R+ L+ANRAAA +NL ++ +A+ DC +AL L P Y + LLR+  L+ ++D+ + ++E     L      +A+ R A A L
Sbjct:  111 NECFKKSDYEEAVRLYTTALNTCPLKYQSERSILYANRAAAKINLEKNEEAILDCNKALELNPSYLKALLRRASLYRKMDRLDNSLEDYQKVLEL-DRNNAEARQACAVL 219          
BLAST of mRNA_L-elsbetiae_contig10950.857.1 vs. uniprot
Match: A0A813E8K1_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813E8K1_POLGL)

HSP 1 Score: 65.9 bits (159), Expect = 2.680e-9
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 1
Query:  373 DIYSIGHYATLGVRFSATAREVKVAHRNLVLEHHPDKNQGDPSSVERFRAIQAAYEV 543
            D+    HY TLGV   A   EV++A+R LVL++HPDKNQG   + E+FR +QAAYE 
Sbjct:  369 DLQVADHYRTLGVAPDAHPEEVRLAYRKLVLQYHPDKNQGSLEASEKFREVQAAYEA 425          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10950.857.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5Y3_ECTSI3.400e-3056.45Heat shock protein 40 like protein n=1 Tax=Ectocar... [more]
G0SHI5_CHATD3.320e-1731.28J domain-containing protein n=1 Tax=Chaetomium the... [more]
UPI00083C5CCF8.470e-1427.89dnaJ homolog subfamily C member 7 n=1 Tax=Nicropho... [more]
A0A7N0VCQ3_KALFE9.800e-1331.32J domain-containing protein n=1 Tax=Kalanchoe fedt... [more]
A0A433D7B3_9FUNG1.830e-1229.94J domain-containing protein n=2 Tax=Jimgerdemannia... [more]
F0ZYA8_DICPU1.270e-1127.81J domain-containing protein n=1 Tax=Dictyostelium ... [more]
A0A1X7UD64_AMPQE9.950e-1128.80J domain-containing protein n=1 Tax=Amphimedon que... [more]
UPI001EE598FC6.180e-1027.17dnaJ homolog subfamily C member 7-like n=2 Tax=Hal... [more]
A0A087T0P5_STEMI1.820e-933.64Tetratricopeptide repeat protein 1 (Fragment) n=2 ... [more]
A0A813E8K1_POLGL2.680e-952.63Hypothetical protein n=2 Tax=Polarella glacialis T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10950contigL-elsbetiae_contig10950:1610..3050 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score155.2
Seed ortholog evalue3e-35
Seed eggNOG ortholog2880.D7G5Y3
KEGG koko:K09523,ko:K09524,ko:K09527,ko:K09536
KEGG Pathwayko04141,ko05164,map04141,map05164
Hectar predicted targeting categoryother localisation
EggNOG free text desc.chaperone cofactor-dependent protein refolding
EggNOG OGsCOG0484@1,KOG0550@2759,KOG0713@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Exons4
Model size566
Cds size564
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10950.857.1prot_L-elsbetiae_contig10950.857.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10950 1610..3050 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815312.2125857-CDS-L-elsbetiae_contig10950:1609..17861622815312.2125857-CDS-L-elsbetiae_contig10950:1609..1786Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10950 1610..1786 +
1691682831.411319-CDS-L-elsbetiae_contig10950:1609..17861691682831.411319-CDS-L-elsbetiae_contig10950:1609..1786Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10950 1610..1786 +
1622815312.2610621-CDS-L-elsbetiae_contig10950:2216..23061622815312.2610621-CDS-L-elsbetiae_contig10950:2216..2306Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10950 2217..2306 +
1691682831.421944-CDS-L-elsbetiae_contig10950:2216..23061691682831.421944-CDS-L-elsbetiae_contig10950:2216..2306Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10950 2217..2306 +
1622815312.2727683-CDS-L-elsbetiae_contig10950:2585..27531622815312.2727683-CDS-L-elsbetiae_contig10950:2585..2753Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10950 2586..2753 +
1691682831.4321516-CDS-L-elsbetiae_contig10950:2585..27531691682831.4321516-CDS-L-elsbetiae_contig10950:2585..2753Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10950 2586..2753 +
1622815312.2837207-CDS-L-elsbetiae_contig10950:2921..30501622815312.2837207-CDS-L-elsbetiae_contig10950:2921..3050Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10950 2922..3050 +
1691682831.4434462-CDS-L-elsbetiae_contig10950:2921..30501691682831.4434462-CDS-L-elsbetiae_contig10950:2921..3050Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10950 2922..3050 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10950.857.1

>prot_L-elsbetiae_contig10950.857.1 ID=prot_L-elsbetiae_contig10950.857.1|Name=mRNA_L-elsbetiae_contig10950.857.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp
FADDAYRSGLYEPAVMLYSQAIRMADQQDIEKRACLFANRAAALMNLGRD
ADAVRDCKEALRLKPEYPRVLLRKGRLHARLDQWELAIEALSTCLHSATA
LHAQVRDAAAELEQCWRSQRDDQDDIYSIGHYATLGVRFSATAREVKVAH
RNLVLEHHPDKNQGDPSSVERFRAIQAAYEVRFTYIR*
back to top

mRNA from alignment at L-elsbetiae_contig10950:1610..3050+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10950.857.1 ID=mRNA_L-elsbetiae_contig10950.857.1|Name=mRNA_L-elsbetiae_contig10950.857.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1441bp|location=Sequence derived from alignment at L-elsbetiae_contig10950:1610..3050+ (Laminarionema elsbetiae ELsaHSoW15)
TTCGCCGACGATGCCTACAGATCCGGATTGTACGAGCCAGCGGTTATGCT GTATTCGCAGGCCATACGCATGGCGGATCAACAGGATATCGAAAAGAGGG CGTGCCTGTTCGCCAACCGCGCAGCAGCTCTCATGAACCTGGGGAGAGAT GCCGACGCGGTTAGAGACTGCAAAGAGGTGCGTTCTTGGTCTCTTCTGTG CCACCCCCCCCCCCCAGGCTTTGGTGCTCGGACGAGGTTCCGTGCTACAT AGTGAAGCGGTTCTGGCTGACTCTTCGCTTGAAGTTGTTGCTACTCAGCT CCGCCTTTGGCGCGCTTCGCCGTGACAAGTTCCTACATTTGCGCCGGTAT GCGTGCACTGCTGTGTAGTGACGCTTAGCTTTCCTCCCTCCCCCCGTTGT GCCCCCAACTCAGATTGAGTATTTTCGACCTGCGTCCGCAAAGCCGTGGA ACGTTGGAAGCATGGAACAAACTCGTGGTGCTTGCACTCGTTTTGGAGTA TGTTTCCTATGTTTGTCGTCGGTGGTACTTTTTGGAGTGTACACAACAGC GCCGTAGATAATTCGCCTCGCTCATCATTGAGTCTCTCGCATTCTTGGAT GTCGCAGGCTTTGCGGCTGAAGCCCGAGTACCCGAGAGTGCTGTTACGCA AGGGCAGGCTTCACGCGCGCCTGGACCAGTGGGAACTCGCCATCGAGGTA AGCTCAAGATTAGCAGGTGGCCGTCTGCCTGCTGGAGAAAGCAAGCTTTA CTGGCAAGCTGCTTGCGATGCAGAGACGTAGATGCATACTCCTACATAGA TAGAGAGGTATTGCCATGAGCGAGCGTTCCTTTTGCTTGACGGCGCACCA TCACCTTTACTTCCAGAGTAGAGAGTCGGCCAAGGTTGGTCACCAAGCAT AAGGTACATTCAGAAATTATGACAACATCCATGTGATGCCTCTCCCCCCG CCCCCTCATTTGCGTGATCTATTCAGGCCCTCTCCACCTGCCTCCACAGC GCGACCGCCCTCCACGCACAAGTGAGGGACGCCGCGGCTGAACTCGAGCA GTGCTGGCGAAGCCAGCGAGATGACCAAGACGATATATACTCTATCGGGC ACTATGCCACCCTCGGAGTCAGGTTTAGCGCTACCGCACGGGAGGTACGC ACGCGTAAAGGGTTTAGGGACGAGGCGTCGTGTCGCTGTTGTCGAGCAAC CTGTTGAGCAGGCCAAGCTTGAAGCCCTAAACATCATTCCACTGTTTTTC ACGCCTTAGGGCGGCTTTACCGTGACGATGGATTGCCGTTGTATCGTTAT GACGGTATGCAGGTGAAGGTGGCACACCGCAACCTGGTATTGGAGCATCA CCCGGACAAGAACCAGGGCGATCCTTCATCTGTCGAGCGCTTCAGAGCCA TCCAGGCAGCCTACGAGGTGAGATTTACATACATACGCTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig10950:1610..3050+

>mRNA_L-elsbetiae_contig10950.857.1 ID=mRNA_L-elsbetiae_contig10950.857.1|Name=mRNA_L-elsbetiae_contig10950.857.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1128bp|location=Sequence derived from alignment at L-elsbetiae_contig10950:1610..3050+ (Laminarionema elsbetiae ELsaHSoW15)
TTCGCCGACGATGCCTACAGATCCGGATTGTACGAGCCAGCGGTTATGCT
GTATTCGCAGGCCATACGCATGGCGGATCAACAGGATATCGAAAAGAGGG
CGTGCCTGTTCGCCAACCGCGCAGCAGCTCTCATGAACCTGGGGAGAGAT
GCCGACGCGGTTAGAGACTGCAAAGAGTTCGCCGACGATGCCTACAGATC
CGGATTGTACGAGCCAGCGGTTATGCTGTATTCGCAGGCCATACGCATGG
CGGATCAACAGGATATCGAAAAGAGGGCGTGCCTGTTCGCCAACCGCGCA
GCAGCTCTCATGAACCTGGGGAGAGATGCCGACGCGGTTAGAGACTGCAA
AGAGGCTTTGCGGCTGAAGCCCGAGTACCCGAGAGTGCTGTTACGCAAGG
GCAGGCTTCACGCGCGCCTGGACCAGTGGGAACTCGCCATCGAGGCTTTG
CGGCTGAAGCCCGAGTACCCGAGAGTGCTGTTACGCAAGGGCAGGCTTCA
CGCGCGCCTGGACCAGTGGGAACTCGCCATCGAGGCCCTCTCCACCTGCC
TCCACAGCGCGACCGCCCTCCACGCACAAGTGAGGGACGCCGCGGCTGAA
CTCGAGCAGTGCTGGCGAAGCCAGCGAGATGACCAAGACGATATATACTC
TATCGGGCACTATGCCACCCTCGGAGTCAGGTTTAGCGCTACCGCACGGG
AGGCCCTCTCCACCTGCCTCCACAGCGCGACCGCCCTCCACGCACAAGTG
AGGGACGCCGCGGCTGAACTCGAGCAGTGCTGGCGAAGCCAGCGAGATGA
CCAAGACGATATATACTCTATCGGGCACTATGCCACCCTCGGAGTCAGGT
TTAGCGCTACCGCACGGGAGGTGAAGGTGGCACACCGCAACCTGGTATTG
GAGCATCACCCGGACAAGAACCAGGGCGATCCTTCATCTGTCGAGCGCTT
CAGAGCCATCCAGGCAGCCTACGAGGTGAGATTTACATACATACGCTGAG
TGAAGGTGGCACACCGCAACCTGGTATTGGAGCATCACCCGGACAAGAAC
CAGGGCGATCCTTCATCTGTCGAGCGCTTCAGAGCCATCCAGGCAGCCTA
CGAGGTGAGATTTACATACATACGCTGA
back to top