mRNA_L-elsbetiae_contig10919.834.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10919.834.1 vs. uniprot
Match: A0A6H5K2B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B3_9PHAE) HSP 1 Score: 176 bits (445), Expect = 1.370e-49 Identity = 108/224 (48.21%), Postives = 126/224 (56.25%), Query Frame = 2 Query: 47 MPLPLETLKGISKLVKLKGGGLILERHYEVLKKHVEDGNRQTEEH*ESID------------------------------------------------------------TMDPDDEIQAMKIPDGFFVQASPPSDLDSSLLRRGVLVRLGMGWFGGLITRQSQERTRHQYDYRVHLEEDQSTRSTKLPLEKYSGDPEAVKGSWVLLEEITSEQVDGNSVRAVL 538 M LPL TLK + KL LK G+ILER YEV+KKHV +GN + E E+ D +M+ D+EI AM+IPDGF +QAS P+ LDSSLL+RG+LVRLGMGW GG+ITRQSQERTRH YDYRVHL+ DQSTRS KLPLE Y DP+AV SW+LLE T EQVDG A L Sbjct: 1 MSLPLATLKELQKLAALKAKGVILERQYEVIKKHVREGNSLSSEDWEAFDLARDLRSSGVLSEEEWTTQTVEGEGDHSGEGVEDGDSSDEDTRETASGQMDELRLVDDDDSMESDNEIHAMEIPDGFRIQASTPAALDSSLLQRGLLVRLGMGWLGGIITRQSQERTRHLYDYRVHLDLDQSTRSMKLPLEMYR-DPDAVVDSWILLERSTVEQVDGGGAAATL 223
BLAST of mRNA_L-elsbetiae_contig10919.834.1 vs. uniprot
Match: A0A6H5KHL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHL7_9PHAE) HSP 1 Score: 161 bits (407), Expect = 1.490e-45 Identity = 81/114 (71.05%), Postives = 95/114 (83.33%), Query Frame = 2 Query: 179 H*ESIDTMDPDDEIQAMKIPDGFFVQASPPSDLDSSLLRRGVLVRLGMGWFGGLITRQSQERTRHQYDYRVHLEEDQSTRSTKLPLEKYSGDPEAVKGSWVLLEEITSEQVDGN 520 H + D+M+ DDEI+AM+IPDGF +QAS P+ LD+ LL+RG+LVRLGMGWFGGLITRQSQERTRH YDYRVHL+ DQSTR KL LE Y GDP+AV GSW+LLE T EQVDG+ Sbjct: 6 HVDDDDSMESDDEIRAMEIPDGFRIQASTPAALDNLLLQRGLLVRLGMGWFGGLITRQSQERTRHLYDYRVHLDLDQSTRGMKLQLEMYKGDPDAVVGSWILLERNTVEQVDGS 119
BLAST of mRNA_L-elsbetiae_contig10919.834.1 vs. uniprot
Match: A0A6H5JUW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUW4_9PHAE) HSP 1 Score: 152 bits (385), Expect = 1.450e-42 Identity = 80/119 (67.23%), Postives = 91/119 (76.47%), Query Frame = 2 Query: 200 MDPDDEIQAMKIPDGFFVQASPPSDLDSSLLRRGVLVRLGMGWFGGLITRQSQERTRHQYDYRVHLEEDQSTRSTKLPLEKYSGDPEAVKGSWVLLEEITSEQVDGNSVRAVLLVDRGG 556 M+ D+EI AM+IPD F +QA P+ LD SLL+RGVLV LGMGWFGG+ITRQSQERTRH YDY +HL+ DQSTRS KLPLE Y DP+AV GSW+LLE T EQVDG A L V R G Sbjct: 1 MESDEEIHAMEIPDRFRIQACTPAALDISLLQRGVLVGLGMGWFGGVITRQSQERTRHLYDYHMHLDLDQSTRSMKLPLEMYREDPDAVVGSWILLERSTVEQVDGGGNAASLGVSRAG 119
BLAST of mRNA_L-elsbetiae_contig10919.834.1 vs. uniprot
Match: A0A6H5JXN2_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN2_9PHAE) HSP 1 Score: 162 bits (411), Expect = 2.150e-41 Identity = 80/108 (74.07%), Postives = 95/108 (87.96%), Query Frame = 2 Query: 197 TMDPDDEIQAMKIPDGFFVQASPPSDLDSSLLRRGVLVRLGMGWFGGLITRQSQERTRHQYDYRVHLEEDQSTRSTKLPLEKYSGDPEAVKGSWVLLEEITSEQVDGN 520 +M+ DDEI+AM+IPDGF +QAS P+ LD+SLL+RG+LVRLGMGWFGG+ITRQSQERTRH YDYRVHL+ D+STRS KLPLE Y GDP+AV GSW+LLE T EQVDG+ Sbjct: 542 SMESDDEIRAMEIPDGFRIQASTPAALDNSLLQRGLLVRLGMGWFGGVITRQSQERTRHLYDYRVHLDLDRSTRSMKLPLEMYKGDPDAVVGSWILLERNTVEQVDGS 649
BLAST of mRNA_L-elsbetiae_contig10919.834.1 vs. uniprot
Match: A0A6H5L5J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J8_9PHAE) HSP 1 Score: 146 bits (368), Expect = 3.710e-37 Identity = 73/105 (69.52%), Postives = 86/105 (81.90%), Query Frame = 2 Query: 194 DTMDPDDEIQAMKIPDGFFVQASPPSDLDSSLLRRGVLVRLGMGWFGGLITRQSQERTRHQYDYRVHLEEDQSTRSTKLPLEKYSGDPEAVKGSWVLLEEITSEQ 508 D+M+ DDEI AM+IPDGF +QA P+ +DSSLL+RGVLVRLGMGWFGG+ITR+SQERTRH YDYRVHL+ DQST S KLPLE Y G P+AV GSW+LL S + Sbjct: 256 DSMESDDEIHAMEIPDGFCIQACTPAAIDSSLLQRGVLVRLGMGWFGGVITRKSQERTRHLYDYRVHLDLDQSTSSMKLPLEMYRGVPDAVVGSWILLGRARSSR 360
BLAST of mRNA_L-elsbetiae_contig10919.834.1 vs. uniprot
Match: A0A6H5K0X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0X8_9PHAE) HSP 1 Score: 134 bits (338), Expect = 9.900e-35 Identity = 76/125 (60.80%), Postives = 89/125 (71.20%), Query Frame = 2 Query: 185 ESIDTMDPDDEIQAMKIPDGFFVQASPPSDLDSSLLRRGVLVRLGMGWFGGLITRQSQERTRHQYDYRVHLEEDQSTRSTKLPLEKYSGDPEAVKGSWVLLEEITSEQVDGNSVRA-VLLVDRGG 556 +S+D DP+DEIQ M+IP GF +Q + P L+ LLRRGVLVRLGMGWFGGLIT+QSQ+ RH YDY V LE QSTR KLPL+KYSGD +A GSWVLLE I+ G R V LVD+ G Sbjct: 65 DSMDPQDPEDEIQGMEIPAGFHIQEAKPVVLERLLLRRGVLVRLGMGWFGGLITQQSQKDIRHLYDYCVQLELHQSTRKMKLPLDKYSGDSDAAVGSWVLLESISRS---GRVRRTNVTLVDQEG 186
BLAST of mRNA_L-elsbetiae_contig10919.834.1 vs. uniprot
Match: A0A6H5KLT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT3_9PHAE) HSP 1 Score: 132 bits (333), Expect = 1.680e-34 Identity = 73/124 (58.87%), Postives = 88/124 (70.97%), Query Frame = 2 Query: 185 ESIDTMDPDDEIQAMKIPDGFFVQASPPSDLDSSLLRRGVLVRLGMGWFGGLITRQSQERTRHQYDYRVHLEEDQSTRSTKLPLEKYSGDPEAVKGSWVLLEEITSEQVDGNSVRAVLLVDRGG 556 +S+D DP+DE Q M+IP GF +Q S P+ LD LL+RGVLVRLGMGWFGGLI +QS +R H YDY V LE D STR+ KLPL+KYSGDP+A GSWVLLE ++ VR LVD+ G Sbjct: 29 DSMDPDDPEDETQGMEIPAGFRLQESTPAALDRLLLQRGVLVRLGMGWFGGLIIQQSPQR--HLYDYCVQLEVDHSTRNVKLPLDKYSGDPDAAVGSWVLLESVSM----AGRVRTPTLVDQDG 146
BLAST of mRNA_L-elsbetiae_contig10919.834.1 vs. uniprot
Match: A0A6H5KA94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA94_9PHAE) HSP 1 Score: 132 bits (332), Expect = 2.230e-34 Identity = 75/125 (60.00%), Postives = 88/125 (70.40%), Query Frame = 2 Query: 185 ESIDTMDPDDEIQAMKIPDGFFVQASPPSDLDSSLLRRGVLVRLGMGWFGGLITRQSQERTRHQYDYRVHLEEDQSTRSTKLPLEKYSGDPEAVKGSWVLLEEITSEQVDGNSVRA-VLLVDRGG 556 +S D +P+DEIQ M+IP GF +Q + P L LLRRGVLVRLGMGWFGGLIT+Q Q+ TRH YDY V LE DQSTR KLPL+KYSGD +A GSWVLLE ++ G R V LVD+ G Sbjct: 23 DSTDPQNPEDEIQGMEIPAGFRIQDAKPVALGRLLLRRGVLVRLGMGWFGGLITQQYQKDTRHLYDYCVQLELDQSTRKMKLPLDKYSGDSDAAVGSWVLLESVSRS---GRVRRTNVTLVDQEG 144
BLAST of mRNA_L-elsbetiae_contig10919.834.1 vs. uniprot
Match: A0A6H5KMY4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMY4_9PHAE) HSP 1 Score: 134 bits (337), Expect = 4.820e-34 Identity = 77/125 (61.60%), Postives = 90/125 (72.00%), Query Frame = 2 Query: 185 ESIDTMDPDDEIQAMKIPDGFFVQASPPSDLDSSLLRRGVLVRLGMGWFGGLITRQSQERTRHQYDYRVHLEEDQSTRSTKLPLEKYSGDPEAVKGSWVLLEEITSEQVDGNSVRA-VLLVDRGG 556 +S+D DP+DEIQ M+IP GF +Q + P LD LLRRGVLVRLGMG FGGLIT+QSQ+ TRH YD V LE DQSTR KLPL+KYSGD +A GSWVLLE I+ G R V L+D+GG Sbjct: 110 DSMDPQDPEDEIQGMEIPAGFRIQKATPVALDRLLLRRGVLVRLGMGGFGGLITQQSQKDTRHLYDCCVQLELDQSTRKMKLPLDKYSGDSDAAVGSWVLLESISRS---GRVRRTNVTLMDQGG 231
BLAST of mRNA_L-elsbetiae_contig10919.834.1 vs. uniprot
Match: A0A6H5JB97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB97_9PHAE) HSP 1 Score: 130 bits (327), Expect = 1.190e-33 Identity = 66/105 (62.86%), Postives = 79/105 (75.24%), Query Frame = 2 Query: 185 ESIDTMDPDDEIQAMKIPDGFFVQASPPSDLDSSLLRRGVLVRLGMGWFGGLITRQSQERTRHQYDYRVHLEEDQSTRSTKLPLEKYSGDPEAVKGSWVLLEEIT 499 +S+D DP+DE Q M+IP GF +Q P LD L RRGVLVRLGMGWFGGLI +QSQ+ TRH YDY V LE DQSTR KL L++Y+GDP+A GSWVLLE ++ Sbjct: 22 DSMDPQDPEDETQGMEIPTGFRIQEVKPVALDRLLFRRGVLVRLGMGWFGGLIIQQSQQDTRHLYDYCVQLELDQSTRKMKLLLDEYTGDPDAAVGSWVLLESVS 126 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10919.834.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10919.834.1 >prot_L-elsbetiae_contig10919.834.1 ID=prot_L-elsbetiae_contig10919.834.1|Name=mRNA_L-elsbetiae_contig10919.834.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=125bp MDPDDEIQAMKIPDGFFVQASPPSDLDSSLLRRGVLVRLGMGWFGGLITRback to top mRNA from alignment at L-elsbetiae_contig10919:4639..5653+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10919.834.1 ID=mRNA_L-elsbetiae_contig10919.834.1|Name=mRNA_L-elsbetiae_contig10919.834.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1015bp|location=Sequence derived from alignment at L-elsbetiae_contig10919:4639..5653+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10919:4639..5653+ >mRNA_L-elsbetiae_contig10919.834.1 ID=mRNA_L-elsbetiae_contig10919.834.1|Name=mRNA_L-elsbetiae_contig10919.834.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=750bp|location=Sequence derived from alignment at L-elsbetiae_contig10919:4639..5653+ (Laminarionema elsbetiae ELsaHSoW15)back to top |