mRNA_L-elsbetiae_contig10873.798.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10873.798.1
Unique NamemRNA_L-elsbetiae_contig10873.798.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: D7FPE8_ECTSI (Intraflagellar transpot protein 74 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE8_ECTSI)

HSP 1 Score: 369 bits (948), Expect = 5.650e-124
Identity = 204/247 (82.59%), Postives = 233/247 (94.33%), Query Frame = 1
Query:    1 SRREAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMRE 741
            +RREAQGLDEIFLAKQQ+E+ETQELEAEMEAVHGRME+KINTLEPEKLHEYR+LLQRN++LQ+EVA +QAEADRLSA IGQHE+R+QGAGG  AALRGEYQ+LEKSVG+LRRE+ENL QDLEISNMNPK+AR+RLLSKVKADQERLKQLDAR AETT+ V  MK+R+EDLESDL+ADRKGDVAQNKVEVLQKRDKEMT+F++KF+QTK EAL DQR+AR+TIV LLEHISTGLESQH++PDK  MR+
Sbjct:  180 NRREAQGLDEIFLAKQQHERETQELEAEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNHLQAEVAAKQAEADRLSAMIGQHESRSQGAGG--AALRGEYQVLEKSVGALRRERENLSQDLEISNMNPKDARDRLLSKVKADQERLKQLDARAAETTEEVVRMKERLEDLESDLKADRKGDVAQNKVEVLQKRDKEMTDFIEKFDQTKQEALDDQRSARSTIVGLLEHISTGLESQHHIPDKGGMRD 424          
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A6H5JUN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN2_9PHAE)

HSP 1 Score: 345 bits (885), Expect = 1.430e-113
Identity = 205/290 (70.69%), Postives = 232/290 (80.00%), Query Frame = 1
Query:    1 SRREAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQ------------------------SEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKE--------------------ARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMR 738
            +RREAQGLDEIFLAKQQ+E+ETQELEAEMEAVHGRME+KINTLEPEKLHEYR+LLQRN++LQ                        +EVA +QAEADRLSA IGQHE+R+QGAGG  AALRGEYQ+LEKSVG+LRRE+ENL QDLEISNMNPK+                    AR+RLLSKVKADQERLKQLDAR AETT+ V  MK+R+EDLESDL+ADRKGDVAQNKVEVLQKRDKEMT+F+DKF+QTK EAL DQR+AR+TIV LLEHISTGLESQH++PDK  MR
Sbjct:  143 NRREAQGLDEIFLAKQQHERETQELEAEMEAVHGRMEEKINTLEPEKLHEYRVLLQRNNHLQVAYGTEFFGVKSALSSSSLGSLGTAEVAAKQAEADRLSAMIGQHESRSQGAGG--AALRGEYQVLEKSVGALRRERENLSQDLEISNMNPKDVRATGDSLVAVSVKIFFFVKARDRLLSKVKADQERLKQLDARAAETTEEVVRMKERLEDLESDLKADRKGDVAQNKVEVLQKRDKEMTDFIDKFDQTKQEALDDQRSARSTIVGLLEHISTGLESQHHIPDKGGMR 430          
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A836CE00_9STRA (Intraflagellar transport protein 74 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE00_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.770e-62
Identity = 131/292 (44.86%), Postives = 196/292 (67.12%), Query Frame = 1
Query:    1 SRREAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKG--DVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMREMEDEKSFKDKQLKSAEATMRRLHQDKEKRLQEMEKVKTLDEKV 870
            +RR A+ LD +FL+KQ+ E+   ++E  +  VH  ME ++N ++P+KL EYR L+QR+  L++EVA  QAE D ++A+I +HEAR    G  G + R EY+ +E+ VG LRR+++ L  D+E+++M PK ARE+LL+KVKADQ+R K LD R+A+T   +E M+  + + E+D +A R G  ++  +KVEVLQ+RD EM+EF+D+F+ T+   L +Q  A+  IV+LL HIS+GLE+QH +P++                   A+ TMRRL  +KEKRL EM K+ TLDEK+
Sbjct:  165 NRRNARELDNVFLSKQERERAVADVEQAIAQVHREMEGRVNAMDPQKLEEYRGLVQRSQQLEAEVASVQAETDAMTARIKEHEARM---GPKGGSYRQEYKDVEREVGRLRRQRDALAADIELASMEPKAAREKLLAKVKADQDRSKDLDRRSADTASEMEKMRAAVAEAEADARAGRSGAGEIDPSKVEVLQRRDAEMSEFIDRFDATRAGVLQEQSRAQEAIVALLAHISSGLEAQHTIPEQ-------------------AQVTMRRLQGEKEKRLAEMAKIDTLDEKI 434          
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A6V2XWW9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XWW9_HETAK)

HSP 1 Score: 187 bits (476), Expect = 1.460e-51
Identity = 114/290 (39.31%), Postives = 188/290 (64.83%), Query Frame = 1
Query:    1 SRREAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMREMEDEKSFKDKQLKSAEATMRRLHQDKEKRLQEMEKVKTLDEKV 870
            +RR+AQ +D++FL KQ  ++ T+E E E+E +H   E K+N LEP KL +Y+ LL R+H LQ+    +Q   D+   +  + EA  +  G         Y+ L++ +  LRR+++ L ++ E++ M+P+EA +++L++VK D  R  +LD +     + +  +++++ DL +DL A    D A+ K E L +RD+EMT+F+ KF++TK + +   +  + TIV LLEHIS GL ++ N+P   ++ EM+DE  FK+KQL++++ TM RL Q+KEKRLQEMEK+ TLD+K+
Sbjct:  177 NRRDAQEVDQVFLRKQGRDRATREAEEEVERIHRANEQKLNRLEPAKLSQYKALLDRSHQLQARAHEQQEALDQALGRAAEAEAELRERG-----HNDRYKDLQRRLDRLRRDRQGLLEEQELAAMDPREANKKVLARVKEDNRRAAELDQKARALREEIGRLRRQLGDLSADLTAKEGADSAKTKYERLSQRDQEMTQFIAKFDETKAQIVGGIQNTQDTIVGLLEHISRGLGAESNMPSADKLDEMKDEARFKEKQLETSQMTMARLRQEKEKRLQEMEKINTLDDKI 461          
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A7S2WUI2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUI2_9STRA)

HSP 1 Score: 172 bits (437), Expect = 4.890e-46
Identity = 114/286 (39.86%), Postives = 184/286 (64.34%), Query Frame = 1
Query:   13 AQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMREMEDEKSFKDKQLKSAEATMRRLHQDKEKRLQEMEKVKTLDEKV 870
            AQ +D IFL  +Q E   Q +E ++E V+ + + KIN+++P +L +Y+ LL ++  LQ   A  QA+ D ++ QI  ++A+         +   E+Q LE     L+R+ ++L ++ EIS + P E ++R+L+KVKAD  R   LD    +        +Q + +L++++    K D  ++K E L +RD+EMTEF+D F++TK   L +Q+ A+ TIV LL HIS GLE++ N+P + R++EM DE SFK+KQL+S++ATM+RL +++E RL+EMEK+K LDEK+
Sbjct:  168 AQEIDRIFLQTKQEEAVCQTVEQQIEGVYQKNQAKINSMDPGRLQQYQELLHQSQALQERSAHMQAQIDSVTDQIALYQAQRDA-----NSCNQEFQDLEDRGMLLQRQLQSLMEEQEISRLEPGEMQQRMLAKVKADNARAAALDEEIKQLRDESRRQEQTVSELKAEVSNGGKSD--KDKYEKLYQRDREMTEFIDGFDETKKAILNEQKEAQETIVGLLAHISKGLEAEGNMPSQERLQEMHDEASFKEKQLESSQATMQRLQKERELRLEEMEKIKNLDEKI 446          
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A7S2C280_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C280_9STRA)

HSP 1 Score: 155 bits (393), Expect = 3.960e-41
Identity = 95/248 (38.31%), Postives = 163/248 (65.73%), Query Frame = 1
Query:  127 LEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMREMEDEKSFKDKQLKSAEATMRRLHQDKEKRLQEMEKVKTLDEKV 870
            +EP +  +YR L+Q +  LQ + A  Q++ D+++ Q+    A+  G       L  E++ LE     L R+ ++L+++ E++ ++PKE + ++L+KVKAD +R KQ+D +  +        +Q + +L  DL     G+  ++K E L +RD+EM+EF+D F+QT+GE   DQ   ++ IV LLEHIS+GL+++ ++P K R+ EM+DE SFK++QL+S++ATM+RL Q++ +R+ EMEK++ LDEK+
Sbjct:    1 MEPAQAEQYRALVQESQVLQDQCAQHQSQIDQVADQVAMLTAQRDG-----NTLNKEFRQLESQQMKLSRQMQSLEEEAEVAKLDPKEMQAKMLAKVKADTDRSKQMDMQIKDMRGENRKAEQVLAELTQDLTDRSNGNNEKDKYEKLYQRDREMSEFIDTFDQTQGEIKNDQDGTQSNIVGLLEHISSGLDAEGSMPSKERLSEMKDEASFKERQLESSQATMQRLQQERTQRVAEMEKIQNLDEKI 243          
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A7R9YER1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YER1_9STRA)

HSP 1 Score: 158 bits (400), Expect = 9.480e-41
Identity = 108/284 (38.03%), Postives = 172/284 (60.56%), Query Frame = 1
Query:   10 EAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMREMEDEKSFKDKQLKSAEATMRRLHQDKEKRLQEMEKVKTLD 861
            E Q +D+IFL +Q  EK   E+E  +  +H   E++IN LEPEKL  YR LLQ++   Q+E    Q EAD ++A+I + E   +       + R EY  LE+    LRREKE+L+ DL+IS M+P+EA  +L  KV  D+ R ++L+ +     + + +M++ + +L S L+  R G+     ++ + +RD+EMT++++ F+  + E L  QR A+ TIVSLLE IS  L S+ N+P     +E++DE +FK++QLKS   T++ L   K +   E+EK++ LD
Sbjct:  187 EGQEVDQIFLQRQAKEKLIDEVEGSIAEIHRMAEERINQLEPEKLERYRRLLQQSEQFQAESTKMQTEADGVNARIREAEIALKE-----NSHREEYNRLERRAMQLRREKESLEYDLKISQMDPQEAFAKLREKVTDDKARTEELEGQIESAQEELGSMRRHLSELTSSLERGRPGNQDGASMDKIMQRDREMTDYIEAFDGKRTEVLDKQRIAQDTIVSLLEQISNNLHSKDNLPSTQAHKELKDEVTFKERQLKSNTQTLQSLQMHKRRTEAELEKLQNLD 465          
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A421GI98_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GI98_9STRA)

HSP 1 Score: 157 bits (398), Expect = 5.920e-40
Identity = 104/290 (35.86%), Postives = 169/290 (58.28%), Query Frame = 1
Query:    7 REAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVP--DKSRMREMEDEKSFKDKQLKSAEATMRRLHQDKEKRLQEMEKVKTLDEKV 870
            REA+ +D +F+ +Q+ EK  + +E EM  +HG+ +DKIN L P+KL  Y+ LL+ +H  + E+  R  E + +   I Q EA            R EY+ LE+ V  L++E++   +D + + M+P EAR  LL+KVK D+ +++ L+    E     + + + + DL+SDL     G    +K E L  +DKEMTEF++ F   K   +  QRAA+  I+ LLEHIS G+  +  +P  + + + EM  + +FK++QL+S+  T +RL  + +KR  E++KV TLD K+
Sbjct:  325 REAEDVDRVFILRQEQEKNVRRMEDEMTEIHGKHQDKINQLAPQKLKRYQELLEEHHQTEVEIEARSQELELVMHAIHQKEAELSS-----DRYRDEYEALERQVRRLQKERDAAAEDAKTAQMDPAEARAVLLAKVKDDKSKMEALEGVLQEAAAEKQELNKALADLQSDLDERASGSDPAHKYEALFAKDKEMTEFLELFPAKKEAEVQSQRAAQGVIIQLLEHISAGMAKEDKLPGTNAANLEEMRKDLTFKERQLESSVTTKQRLTMELQKRQAELDKVNTLDAKI 609          
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A024TR04_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024TR04_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.500e-38
Identity = 102/271 (37.64%), Postives = 166/271 (61.25%), Query Frame = 1
Query:    7 REAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDV----AQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMREMEDEKSFKDKQLKSAEATMRRL 807
            +EA+ +D IF+ +Q+ E+ T+  E E+ A+H R +DKIN L P KL +YR LL+ NH  ++E+  +  E D L   I   E        G    R EY  LE+    L+ E + +Q DL+ + M+P EAR  LL++VK D+ +++Q++ + A   +    +K+ + +++ +L+ +RK D     A  K ++L +RD+EMT FMD F++ K + L +QR ++A IV LLEHIS+GL  Q  +P  S++ EM+ + +FK++QL+SA+ T  RL
Sbjct:  196 KEAEEVDRIFIMRQEQERTTKHFEDEINAIHMRQQDKINQLAPNKLEKYRALLEENHQGEAELEAKSQELDMLMQTIRAKEDEL-----GMDKFRDEYDQLERQAMRLKSECKTIQADLKTAQMDPTEARNMLLARVKDDKAKMEQVEKQIAAADEENAGLKKALNEVKLELE-ERKNDGPDSNASQKYDMLYQRDQEMTAFMDSFDEKKDKELENQRQSQAMIVRLLEHISSGLNRQDKMPTASKVEEMKTDLTFKERQLESAQTTKTRL 460          
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Match: A0A8J5M4D3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M4D3_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.310e-37
Identity = 102/290 (35.17%), Postives = 168/290 (57.93%), Query Frame = 1
Query:    7 REAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHEYRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEYQLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLDARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEFMDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVP--DKSRMREMEDEKSFKDKQLKSAEATMRRLHQDKEKRLQEMEKVKTLDEKV 870
            +EA+ +D +FL  ++ EK  + +EAEM  +HG+ +DKIN L P+KL  Y+ LL+ +H  + E+  R  E + +   I Q EA            R EY+ LE+ V  L++E++   +D + + M+P EAR  LL+KVK D+ +++ L+          + + + + D++S+L     G    +K E L  +DKEMT F+++F   K   L  QRAA+  IV LLEHIS G+  +  +P  + + + EM  + +FK++QL+S+  T +RL  + +KR  E++KV TLD K+
Sbjct:  567 KEAEDVDRVFLMHKEQEKSVRTMEAEMTEIHGKHQDKINQLAPQKLQRYKELLEEHHQTEVEIEARSQELELVMHAIHQKEAELSS-----DRYRDEYEALERQVRRLQKERDAAAEDAKTAQMDPNEARAVLLAKVKDDKAKMEALEGVLQSAAAEKQELTKALADVQSELDERASGSDPAHKYEALFAKDKEMTTFLEQFPAKKEAELQAQRAAQGVIVQLLEHISAGMAKEDKLPGTNAANLEEMRRDLTFKERQLESSVTTKQRLTMELQKRQAELDKVNTLDAKI 851          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10873.798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPE8_ECTSI5.650e-12482.59Intraflagellar transpot protein 74 n=1 Tax=Ectocar... [more]
A0A6H5JUN2_9PHAE1.430e-11370.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CE00_9STRA1.770e-6244.86Intraflagellar transport protein 74 n=1 Tax=Tribon... [more]
A0A6V2XWW9_HETAK1.460e-5139.31Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2WUI2_9STRA4.890e-4639.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2C280_9STRA3.960e-4138.31Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7R9YER1_9STRA9.480e-4138.03Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A421GI98_9STRA5.920e-4035.86Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A024TR04_9STRA1.500e-3837.64Uncharacterized protein n=11 Tax=Aphanomyces TaxID... [more]
A0A8J5M4D3_9STRA1.310e-3735.17Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10873contigL-elsbetiae_contig10873:725..6160 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.5
Seed ortholog evalue1.8e-100
Seed eggNOG ortholog2880.D7FPE8
Preferred nameIFT74
KEGG koko:K19679
Hectar predicted targeting categoryother localisation
GOsGO:0002064,GO:0003334,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005813,GO:0005815,GO:0005856,GO:0005929,GO:0006355,GO:0006357,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007275,GO:0007368,GO:0007389,GO:0007507,GO:0008092,GO:0008150,GO:0008285,GO:0008544,GO:0009799,GO:0009855,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009913,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010970,GO:0015630,GO:0015631,GO:0016043,GO:0019219,GO:0019222,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030155,GO:0030216,GO:0030705,GO:0030855,GO:0030990,GO:0030992,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031503,GO:0031514,GO:0032501,GO:0032502,GO:0032991,GO:0033628,GO:0033630,GO:0035735,GO:0042073,GO:0042127,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043588,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045785,GO:0045893,GO:0045935,GO:0045944,GO:0046907,GO:0048468,GO:0048487,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048731,GO:0048856,GO:0048869,GO:0050678,GO:0050680,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0060271,GO:0060429,GO:0065007,GO:0070925,GO:0071840,GO:0072359,GO:0080090,GO:0097542,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902680,GO:1903506,GO:1903508,GO:1905515,GO:2000112,GO:2001141
EggNOG free text desc.beta-tubulin binding
EggNOG OGs28JR0@1,2QS4E@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons6
Model size870
Cds size870
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10873.798.1prot_L-elsbetiae_contig10873.798.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10873 725..6160 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815305.2780027-CDS-L-elsbetiae_contig10873:724..8291622815305.2780027-CDS-L-elsbetiae_contig10873:724..829Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10873 725..829 +
1691682828.2872553-CDS-L-elsbetiae_contig10873:724..8291691682828.2872553-CDS-L-elsbetiae_contig10873:724..829Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10873 725..829 +
1622815305.2876003-CDS-L-elsbetiae_contig10873:1480..15611622815305.2876003-CDS-L-elsbetiae_contig10873:1480..1561Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10873 1481..1561 +
1691682828.298513-CDS-L-elsbetiae_contig10873:1480..15611691682828.298513-CDS-L-elsbetiae_contig10873:1480..1561Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10873 1481..1561 +
1622815305.2969728-CDS-L-elsbetiae_contig10873:2346..25501622815305.2969728-CDS-L-elsbetiae_contig10873:2346..2550Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10873 2347..2550 +
1691682828.3077543-CDS-L-elsbetiae_contig10873:2346..25501691682828.3077543-CDS-L-elsbetiae_contig10873:2346..2550Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10873 2347..2550 +
1622815305.3092668-CDS-L-elsbetiae_contig10873:3249..34171622815305.3092668-CDS-L-elsbetiae_contig10873:3249..3417Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10873 3250..3417 +
1691682828.3170073-CDS-L-elsbetiae_contig10873:3249..34171691682828.3170073-CDS-L-elsbetiae_contig10873:3249..3417Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10873 3250..3417 +
1622815305.3202019-CDS-L-elsbetiae_contig10873:5460..56401622815305.3202019-CDS-L-elsbetiae_contig10873:5460..5640Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10873 5461..5640 +
1691682828.3275437-CDS-L-elsbetiae_contig10873:5460..56401691682828.3275437-CDS-L-elsbetiae_contig10873:5460..5640Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10873 5461..5640 +
1622815305.3297548-CDS-L-elsbetiae_contig10873:6028..61601622815305.3297548-CDS-L-elsbetiae_contig10873:6028..6160Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10873 6029..6160 +
1691682828.3443415-CDS-L-elsbetiae_contig10873:6028..61601691682828.3443415-CDS-L-elsbetiae_contig10873:6028..6160Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10873 6029..6160 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10873.798.1

>prot_L-elsbetiae_contig10873.798.1 ID=prot_L-elsbetiae_contig10873.798.1|Name=mRNA_L-elsbetiae_contig10873.798.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=290bp
SRREAQGLDEIFLAKQQYEKETQELEAEMEAVHGRMEDKINTLEPEKLHE
YRLLLQRNHNLQSEVAVRQAEADRLSAQIGQHEARAQGAGGGGAALRGEY
QLLEKSVGSLRREKENLQQDLEISNMNPKEARERLLSKVKADQERLKQLD
ARTAETTQVVETMKQRIEDLESDLQADRKGDVAQNKVEVLQKRDKEMTEF
MDKFEQTKGEALADQRAARATIVSLLEHISTGLESQHNVPDKSRMREMED
EKSFKDKQLKSAEATMRRLHQDKEKRLQEMEKVKTLDEKV
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mRNA from alignment at L-elsbetiae_contig10873:725..6160+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10873.798.1 ID=mRNA_L-elsbetiae_contig10873.798.1|Name=mRNA_L-elsbetiae_contig10873.798.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5436bp|location=Sequence derived from alignment at L-elsbetiae_contig10873:725..6160+ (Laminarionema elsbetiae ELsaHSoW15)
TCAAGGCGCGAGGCCCAAGGGCTGGACGAGATATTCCTGGCCAAGCAGCA GTACGAAAAGGAGACGCAGGAGTTGGAGGCAGAGATGGAGGCGGTACACG GACGGGTACGAAAACAAAAAGCAATTCGAAAACAAACTTGGAACCAGGAA CAGAAACCCAGGATAAAAAAACAGGCCATAAACTCCGGCCGGTGGTCACC TCTATCTAGCCTTCCCTGCAAGGAATTCGAGACTGATTTTGCGTATTCTC CTTTTCCCGGGTCACTCACGCCCATTTGTGTATCGGTGCGGGAGGAAAAC CGGCCTGTGTCGATGCTACAAGTTCACGGCGTATTCGTTCTCCTCACAAG CTACATAAGCCTTCGTGAAACACACGGTTTTTCTCTCTTCATTATGAGAA GGAAAAACAACGGAAGGGATAGGCCATGCTAAACGCGGGGGAAGGTGCGC GTGTGGCGTACTGCAAGGGAAGAAAGGGGAAGTTCTCAAGCATGGCTTGC CTTAGCCGTTCGACCTTATTCCTCCGGCAGGGGGCCTTCCCACCCATACC CTACTAGATAGAAGGGAGATACACTGGCCGCATTTCTTCCCCCCTCCCTC TGACACGGAGGAACTGAATCCCCGCCCTCGGATCTTGCATTATTTCGTCT TTCTGAGTGTCGGGAATATTCGGGCCTGCTTGCCTCTGTAATCAGCGCGT TGCCTGCCACACGTAACCGTGTGTAAAATATCGACGTTAACACCACCACC GAGCAGATGGAAGACAAGATCAACACCCTCGAGCCGGAGAAGCTCCACGA GTACCGCCTCCTCCTTCAGCGCAACCACAACCTCCAGGTGTGTATGCGTT TGTTGTGGTGGTATTGATATTTTGATACAGTGCCCTTTAAATGCTCCCGT AAAGTCGAAGGGTCCCTTGTCATCCTCATTGACGATTTTCCCCCCTACTC CTCTGTGCTTGGTGTTGTTGTGGTTGCTGTTGATATTGTTGTGTTTTTAT TTCCCATCGACCGATGTCTCTACTTATACCCGCCTCCGCACACGAAAGTA GGCGTGGTACAGCTCTCATTTCTCACAGATGGGCGCCAGCGCACGTTGCG ATGGGATCGTCAGTCAATGGTCAAGCCAATGAGTGGGCAGGCTTCCGCGC GTTGTCGACACCTTGGCCAAGGTCAAAAACAATATCCGGATGCCCACTCA ATACCCCGCCATTGCGCCTGGGCGCCTTAAAAAGGGCACACCTTGTGAAC TGGCATGATCTCCCGATGTCATACATATCTACGGTCTTACTCCAGCATGT CGCCACACGCTGTCGAGGTCGAAATCCTCCCGATGTCACTGTTAGGTCTT GTTTTTGCGAAAGTTGGTTACTCTCAGTGAGAATTGACCTTGGTCGACCC GGCAGCGTTCGTTGCATGGTTGCTGCCGTCCACACCTGCGTCCGTACTGT TAATTCTCAGCACTCAGCATACCCCCGCACTCGCGGCTTGTGCCCCCGGT GCCCCCCCGTCCCCGTCCCTTAAAATTTCCATCGTCCATCTCCCCGTCGT CGTTCCTACCTCGCGCCCGCCTTGCCGGCGGCGACAATTTACAAACGACA TCGACCAAATCACGAATGGCAGTCGGAGGTGGCCGTCAGGCAGGCCGAAG CCGACCGGCTGTCCGCACAGATCGGCCAGCACGAGGCGAGAGCTCAGGGA GCGGGCGGGGGCGGGGCGGCCCTGCGCGGGGAGTACCAGCTCCTCGAGAA GTCGGTGGGGAGTCTGCGGCGAGAGAAGGAGAACCTGCAGCAAGACCTAG AGATTTCCAACATGAACCCCAAGGAGGTGATGGTGGTGGTGGTGGTGGTG GTGGCGGCGGTGGGGGGGGAGATCAAAGAGCGCGCACGTGGGTTTGGGGT GGAGAGTGTGGGGGGGTCAATGTCATGTATTCACGGGGCCGCTGTCGTCC AATCAGACCATTCGGGCTTTCACTGGACCCGGCAGGGGAAGGAAGGTTGG AGCAGGCGCCTTCTGGGGGTTGGGGGTTGGGGTGTTGGTTGGGTTCGGAA TCTGCTTGAGCCATGGTCTGCTGGTTCTCTGGGTAGCCGGGCCTGGGCTC TGTTTAGGTTGTTTGGCGGGACCCGCTCGTCTTTATCATCATCTTTGGTT TATCCTGTGGTATCGAATCATCCCATCCCATGCCATGGAGATGGCCGATG AGACGCGCCTCGAATCGCTTGAGCCGCAAAGAGTCCGTCTCCAAAAGCCA AGTTGAGCCTGCTTCTCACCGTGGGCGAGCTAAGTTGAGCTGAAAGTTTG TTCCTTGGTAGTGTTATCACCTCAGGCGCGCAAACAGCACCCTTGGCGCC ACCATCACTACCACCTTCACCACCAGCACTACTAACGTCACCAACGTACA AATCCTCGTCGGCTTGCTTGTCCTAATTCTAAATGCATCCACTCAACGGC TCCCCCATCCTCTGTGTTAACAGCCTTGAAAAACAAATGTTTTCTCTTGT CACGATCGCCTCTCTCGTCTCTCAGGCTCGCGAACGCCTCCTGAGCAAGG TCAAGGCGGACCAGGAGCGCCTCAAGCAGCTCGACGCGCGAACAGCCGAG ACGACCCAAGTCGTGGAGACCATGAAGCAGCGCATCGAGGACCTGGAGTC CGACCTCCAGGCAGACCGGAAGGGGGACGTGGCGCAGAACAAGGTGGCGG GAGGATGCATACTGAAAAAAGGGGTATTGTTCAGTGGTGTGTAGGAGGTG ATGCTTGCCGTGCTATCCTGTATGTAGCGCTATCTAAGTCCTACACCGTA ACACCTCGGTATCGGCTTACGCCGAGCAGAGCAAAAGCTTGCCCCTTCGG AGAGAACGTTCCAAGATTTTTCCGGGAAGTATTCACCAATGCCCCGGCAA TGCGAGACTCGCGCCAACCTGCTCCTTTCTCGCTGTTCGCACGCTCGGGG AAAGGGAGCGTCGATCATGAACATAATATCGTTTTCGTTCTTGCCGGGCA TGCGGACAGACAAAAAAGCGAGGAAAACAAATGCTTCCAACTGAAAGAGT CCATTCGACTCACATCCCACACACGTACACAGGTTTCCAACTGATCAACC TGCTGTTGAAGATTTTTCAGAAGTTACCCACGGTGTTCTGCACTGTCAGG TCCCGTCCGCGTTTACCCCGAAGCGCCAACCGAGGTTGCTTTCATTTTTC AACCGGATCAGAACCAGTTCGAGGAGGTTGATTAGAGTGTATGCGTTTCG CGTGGGTTTTTAACTCATTTGGCCAAACAGTGATATCTGTGTAAAGAGCC TACGTGATTAGCTCAGCTCGAAACTGGGCGAAAACGCTGTGGATGCGTGC GAAATGGGCTCTTGCACGTCACTTTCATAAAGATTCTCGGAGACCGGAAC TATTGATAGGCGGAGATCCGCGGGGCGTTGGTGTTGCTGTAGAGCCACGA CGACACACACGTATGTTACGCCAAAACAACGCCCATCCCCGCACCAGCAT CCCCACACGAGCATCAACACCACGCCACAAGCTGCTTGACCGGAAAATGA CCACCGGAAAATTTCCACAGATGTACGCGCGCATTACTCCCGCCACTGAA CAGCCCACTTTCTCATTTGAGTGTTGCCACTGTTTTTGCCCATTTCACGT GGGTCGATTTGCTCGAGTCGAGCAAATGACCCAACGGGGTAACCTACAAA AAGGTCAAATGAGGCCGGGAAAAACAAACGCATCCACTCTATTGGCGCTA GCGACTGTCGCTGGCTAGTCTGTCCCTCACGACCAAAGCTCCACGGATAA TAGCTGAGAGCATTGTAGCGCACCAAAGGGGCAGACATACCTGGTCTTTG CTTTGCCTCTCTCGTTTAGGCTATGGGGTAGTAAGACAAGAAAACGAGAG AGAGGGATAGAGAAAGGAAGAACTCGTTCGCAGGCACCGGCGTATCGGAC AAGTAACAATGACCAACACGAACAACGGCAACGCAGAGGAGAGGGAGAGA CAGAGACAGAGACAGAGACAAAATATAGACAGAGACATAGAGACAGAGAA ACAAATACGTGCCCGAAGCCAAGCGGTGCCCCAAACAGCGCCTGCGTGGG GTGAGTCAACAGAAGAAAAGATCGAACACTCCGAAGTAAAAGGAGTGGTC GTTAAACAAGGCAGACGTAAGCTCTAACCCCTAAGGCATGTCTGGGTATT TGCCTTATTACCTGTTTCAAAACAGACGTGCCTCAGAGGGGTTTTTGTGC CTTTGCAACGTGCCTGAGAGGGTGTATTTAAAAATAAATAATGAATCAAA GATGGAACCTAACCCACACTAGAACAAGGACTCGATATGGGGTTCAGTGC CTTACTGTCCGCATCTTGTTACATATCCCCTCAAGGGGATATTATGAGGC AGGCTTGGCACGGTAGGGCACATTTGACTTGTTCGATAAGGCAGCCCCAG GCATCAGTAAGGCATGTAAGGCACGAAAAGGTGCCCAGGCAATGCCTTAT TCTTTGCCTTATCCTACAATATTTGCCTTATCCTGAAATCTGGAATAAAA TTTGCCTTATCCACTTGCCTTAGACACGAGTCGTGCCTTAGGGGTTATAT CTTAGGCAGACGCCAGCGAATCAAATGTTGGAACGAACCAACGACCAACG AACCGAACCGAACCGAACCGAACCGAACCGAACCGAACCGAACTGAAACC CAAATCGAAATCGAAACCGAAACCGATCCCGAGCAGGTGGAGGTGCTACA GAAGAGGGACAAGGAGATGACCGAGTTCATGGACAAGTTCGAGCAAACGA AGGGGGAGGCCCTCGCGGACCAGCGAGCGGCCAGGGCCACGATTGTCAGC CTCCTCGAGCACATCAGCACGGGCCTTGAGTCCCAGCACAACGTTCCCGA CAAGAGCAGGATGCGGGTGAGGGAAAGGGGAGGCAGAGGCGCGCGCACGG TGTTCTCTGCGCGTATCTGTCTCCATCTCTTGTCTGTCTGCTTGGCTTGT CTTGTCTGCCTGTCGATGCGGCGTACCCGCCGGTTCCATTCTTCGCTGTG GAGCTGTGGTACAGCAGTGTGCCTCGCGTGTTTCGTCTATCTGTCTGTCT TTGGATCCCCCCTCGCCCGTCCATGCTGCTGACATGCCACCCCGTCCCTG CGCTGCATGCGTGCGCGAAATGATGTCGGTGTCGATGTCGGTGCCGGTAT GGATGTTGGAGATCACACGTCCGACTAATCTTGATCTCACCTGACTGGCG TTGTCCTTCGCTTACCCTTGCTCTTACCCTTGCTCTTGCCCTTGCTCTCA CCAGGAAATGGAGGACGAGAAGAGTTTCAAGGACAAGCAGCTCAAGAGCG CCGAGGCCACGATGCGGCGGCTGCACCAGGACAAGGAAAAACGCCTCCAG GAGATGGAAAAAGTCAAAACTCTTGACGAGAAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10873:725..6160+

>mRNA_L-elsbetiae_contig10873.798.1 ID=mRNA_L-elsbetiae_contig10873.798.1|Name=mRNA_L-elsbetiae_contig10873.798.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1740bp|location=Sequence derived from alignment at L-elsbetiae_contig10873:725..6160+ (Laminarionema elsbetiae ELsaHSoW15)
TCAAGGCGCGAGGCCCAAGGGCTGGACGAGATATTCCTGGCCAAGCAGCA
GTACGAAAAGGAGACGCAGGAGTTGGAGGCAGAGATGGAGGCGGTACACG
GACGGTCAAGGCGCGAGGCCCAAGGGCTGGACGAGATATTCCTGGCCAAG
CAGCAGTACGAAAAGGAGACGCAGGAGTTGGAGGCAGAGATGGAGGCGGT
ACACGGACGGATGGAAGACAAGATCAACACCCTCGAGCCGGAGAAGCTCC
ACGAGTACCGCCTCCTCCTTCAGCGCAACCACAACCTCCAGATGGAAGAC
AAGATCAACACCCTCGAGCCGGAGAAGCTCCACGAGTACCGCCTCCTCCT
TCAGCGCAACCACAACCTCCAGTCGGAGGTGGCCGTCAGGCAGGCCGAAG
CCGACCGGCTGTCCGCACAGATCGGCCAGCACGAGGCGAGAGCTCAGGGA
GCGGGCGGGGGCGGGGCGGCCCTGCGCGGGGAGTACCAGCTCCTCGAGAA
GTCGGTGGGGAGTCTGCGGCGAGAGAAGGAGAACCTGCAGCAAGACCTAG
AGATTTCCAACATGAACCCCAAGGAGTCGGAGGTGGCCGTCAGGCAGGCC
GAAGCCGACCGGCTGTCCGCACAGATCGGCCAGCACGAGGCGAGAGCTCA
GGGAGCGGGCGGGGGCGGGGCGGCCCTGCGCGGGGAGTACCAGCTCCTCG
AGAAGTCGGTGGGGAGTCTGCGGCGAGAGAAGGAGAACCTGCAGCAAGAC
CTAGAGATTTCCAACATGAACCCCAAGGAGGCTCGCGAACGCCTCCTGAG
CAAGGTCAAGGCGGACCAGGAGCGCCTCAAGCAGCTCGACGCGCGAACAG
CCGAGACGACCCAAGTCGTGGAGACCATGAAGCAGCGCATCGAGGACCTG
GAGTCCGACCTCCAGGCAGACCGGAAGGGGGACGTGGCGCAGAACAAGGC
TCGCGAACGCCTCCTGAGCAAGGTCAAGGCGGACCAGGAGCGCCTCAAGC
AGCTCGACGCGCGAACAGCCGAGACGACCCAAGTCGTGGAGACCATGAAG
CAGCGCATCGAGGACCTGGAGTCCGACCTCCAGGCAGACCGGAAGGGGGA
CGTGGCGCAGAACAAGGTGGAGGTGCTACAGAAGAGGGACAAGGAGATGA
CCGAGTTCATGGACAAGTTCGAGCAAACGAAGGGGGAGGCCCTCGCGGAC
CAGCGAGCGGCCAGGGCCACGATTGTCAGCCTCCTCGAGCACATCAGCAC
GGGCCTTGAGTCCCAGCACAACGTTCCCGACAAGAGCAGGATGCGGGTGG
AGGTGCTACAGAAGAGGGACAAGGAGATGACCGAGTTCATGGACAAGTTC
GAGCAAACGAAGGGGGAGGCCCTCGCGGACCAGCGAGCGGCCAGGGCCAC
GATTGTCAGCCTCCTCGAGCACATCAGCACGGGCCTTGAGTCCCAGCACA
ACGTTCCCGACAAGAGCAGGATGCGGGAAATGGAGGACGAGAAGAGTTTC
AAGGACAAGCAGCTCAAGAGCGCCGAGGCCACGATGCGGCGGCTGCACCA
GGACAAGGAAAAACGCCTCCAGGAGATGGAAAAAGTCAAAACTCTTGACG
AGAAGGTGGAAATGGAGGACGAGAAGAGTTTCAAGGACAAGCAGCTCAAG
AGCGCCGAGGCCACGATGCGGCGGCTGCACCAGGACAAGGAAAAACGCCT
CCAGGAGATGGAAAAAGTCAAAACTCTTGACGAGAAGGTG
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