mRNA_L-elsbetiae_contig10863.792.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: D8LC92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC92_ECTSI) HSP 1 Score: 223 bits (569), Expect = 1.240e-71 Identity = 109/117 (93.16%), Postives = 114/117 (97.44%), Query Frame = 1 Query: 1 VHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLKAVSAKR 351 VHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGY GTQMVLDPTKEEEK+GAGVMT+ALMPGSQQVTQWWQEGRFDGQK+AEALELCTDGCGCVHKMMEAKLKA + K+ Sbjct: 154 VHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYCGTQMVLDPTKEEEKSGAGVMTIALMPGSQQVTQWWQEGRFDGQKVAEALELCTDGCGCVHKMMEAKLKASTTKK 270
BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: A0A7S2UZ52_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ52_9STRA) HSP 1 Score: 126 bits (316), Expect = 3.130e-33 Identity = 68/130 (52.31%), Postives = 87/130 (66.92%), Query Frame = 1 Query: 1 VHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFG-TQMVLDPTK---------EEEKNG----------AGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKL 330 V++ VLQADGGEL A TCAS+AL+DAGIEL+DLV CSVG G ++++LDPT+ E+ +G AGVMTV P SQ+VTQWWQEG+FD + +A L LC DGC +HK+M+ KL Sbjct: 146 VYIWVLQADGGELGAAVTCASLALSDAGIELFDLVVGCSVGCLGGSRVLLDPTEVEISQQRAPEDSSSGGARGGKQGAKAGVMTVTFTPASQEVTQWWQEGQFDQESMARGLALCIDGCLVMHKIMKEKL 275
BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: A0A835ZHR0_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHR0_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.200e-28 Identity = 60/112 (53.57%), Postives = 75/112 (66.96%), Query Frame = 1 Query: 1 VHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLKA 336 V+V VL ADGG L A TCAS+ALA+A IEL+DLV AC+ Q++LDPT +EE G + VA+MP S++VTQW Q GR + A A+ELC DGC V MM A+L A Sbjct: 141 VYVTVLAADGGVLGAAITCASLALANASIELFDLVAACTAACADGQVLLDPTAQEEAAAGGSVLVAVMPSSREVTQWRQRGRLPSAQAAAAVELCMDGCAGVATMMRARLLA 252
BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: L8HCU8_ACACA (3' exoribonuclease family, domain 1 domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HCU8_ACACA) HSP 1 Score: 105 bits (263), Expect = 1.640e-25 Identity = 53/117 (45.30%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 1 VHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLKAVSAKR 351 V V+VL+ GG + A T AS+ALADAGIE+YDLV +CSVG + ++LDP+ EEK + VA+MP + ++TQ Q G + K EA+ELC DGC +++MM L +A++ Sbjct: 146 VFVLVLEESGGMVGAAITAASLALADAGIEMYDLVASCSVGVVDSHILLDPSIAEEKAAQSNLMVAIMPSANEITQMLQTGEIEHTKAPEAIELCLDGCSKIYQMMRQNLLETAAQK 262
BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: A0A507EGV0_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EGV0_9FUNG) HSP 1 Score: 100 bits (248), Expect = 1.840e-23 Identity = 53/114 (46.49%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 1 VHVMVLQADGGE--LAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLKA 336 V V +L++DG LA A TCAS+ALADAGIE+ D V AC+ GYFG+ + LDPT+EEE G + ++ MP +VT Q G +ALELC D C +H +M+ L A Sbjct: 139 VFVQILESDGSAACLAAAITCASLALADAGIEMVDAVAACAAGYFGSTICLDPTEEEEGYEGGSLVLSYMPSLNEVTHVIQSGETSTATTVKALELCVDACSQIHTVMQQSLAA 252
BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: A0A0D6R5I5_ARACU (Uncharacterized protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R5I5_ARACU) HSP 1 Score: 100 bits (248), Expect = 1.880e-23 Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 1 Query: 1 VHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLKAVSAKR 351 V +VL++ GG+L V +CAS+ALADAGI ++DLVTA SV G +++DPT EEE G + VA MP ++TQ G + K++EALELC D C + +M A LK + ++ Sbjct: 138 VFALVLESGGGDLPVIISCASLALADAGIMMFDLVTAVSVSSIGRNLIIDPTSEEENCQDGGLMVACMPSRNEITQLTITGEWSSTKVSEALELCLDACSKLADIMRACLKEAAVEQ 254
BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: A0A2I0AH60_9ASPA (Exosome complex exonuclease RRP46 like n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AH60_9ASPA) HSP 1 Score: 99.8 bits (247), Expect = 2.540e-23 Identity = 51/111 (45.95%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 1 VHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLK 333 + +VL++ GG+L V +CAS+ALADAGI +YDLV+A S+ FGT +V+DPT EEE G ++ MP ++TQ+ G + KI EALELC D C + ++M + LK Sbjct: 138 IFALVLESGGGDLPVIISCASLALADAGIMMYDLVSAVSLSCFGTNLVIDPTTEEEACRDGSFMISYMPSRNEITQFTLTGEWSTAKINEALELCLDACSKLAEIMRSCLK 248
BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: A0A804I677_MUSAM ((wild Malaysian banana) hypothetical protein n=2 Tax=Musa TaxID=4640 RepID=A0A804I677_MUSAM) HSP 1 Score: 99.8 bits (247), Expect = 2.640e-23 Identity = 52/115 (45.22%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 1 VHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLKAVSA 345 V +VL++ GG+L V TCAS+ALADAGI +YDLV + SV FG +V+DPT EEE G + + MP +VTQ G + KI EA+ELC D C + ++M + LK ++ Sbjct: 138 VFALVLESGGGDLPVIVTCASLALADAGIMMYDLVASVSVSCFGRNLVIDPTSEEEACQDGTLMITCMPARNEVTQLMLTGEWTTAKINEAMELCLDACSKLAEIMRSCLKEAAS 252
BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: M4BVL9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BVL9_HYAAE) HSP 1 Score: 96.7 bits (239), Expect = 2.920e-23 Identity = 50/111 (45.05%), Postives = 71/111 (63.96%), Query Frame = 1 Query: 1 VHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGC-GCVHKMMEAKL 330 V V VL+ +GG LA A CAS+AL DA +E+YD+VTA SVG ++VLDP ++EE+ G G + +A MP ++VT Q G+ ++ EA++LCTD C G + A L Sbjct: 27 VFVTVLENEGGVLAAAINCASLALVDAAVEMYDVVTAASVGIVNGRVVLDPNRDEEQRGDGRLVLAYMPSMERVTYMLQAGKIQHTQLQEAVDLCTDACTGVTRSSLTASL 137
BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Match: A0A427AC79_ENSVE (Uncharacterized protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A427AC79_ENSVE) HSP 1 Score: 97.4 bits (241), Expect = 3.110e-23 Identity = 51/115 (44.35%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 1 VHVMVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKEEEKNGAGVMTVALMPGSQQVTQWWQEGRFDGQKIAEALELCTDGCGCVHKMMEAKLKAVSA 345 V +VL++ GG+L V TCAS+ALADAGI +YDLV + SV FG +V+DPT EEE G + + MP +VTQ G + KI EA+ELC D C + +++ + LK ++ Sbjct: 56 VFALVLESGGGDLPVIITCASLALADAGIMMYDLVASVSVSCFGRNLVIDPTSEEEACQDGTLMITCMPARNEVTQLTLTGEWTTAKINEAMELCLDACSKLAEVVRSCLKEAAS 170 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10863.792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10863.792.1 >prot_L-elsbetiae_contig10863.792.1 ID=prot_L-elsbetiae_contig10863.792.1|Name=mRNA_L-elsbetiae_contig10863.792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=115bp MVLQADGGELAVATTCASMALADAGIELYDLVTACSVGYFGTQMVLDPTKback to top mRNA from alignment at L-elsbetiae_contig10863:4511..5619- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10863.792.1 ID=mRNA_L-elsbetiae_contig10863.792.1|Name=mRNA_L-elsbetiae_contig10863.792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1109bp|location=Sequence derived from alignment at L-elsbetiae_contig10863:4511..5619- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10863:4511..5619- >mRNA_L-elsbetiae_contig10863.792.1 ID=mRNA_L-elsbetiae_contig10863.792.1|Name=mRNA_L-elsbetiae_contig10863.792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=690bp|location=Sequence derived from alignment at L-elsbetiae_contig10863:4511..5619- (Laminarionema elsbetiae ELsaHSoW15)back to top |