mRNA_L-elsbetiae_contig1084.777.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1084.777.1 vs. uniprot
Match: D8LSF3_ECTSI (40S ribosomal protein S26 n=3 Tax=Eukaryota TaxID=2759 RepID=D8LSF3_ECTSI) HSP 1 Score: 206 bits (523), Expect = 5.490e-67 Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSAEMRRNRDPPVRHRPKRD 318 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSAE RRNRDPPVRHRPKRD Sbjct: 1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSAETRRNRDPPVRHRPKRD 106
BLAST of mRNA_L-elsbetiae_contig1084.777.1 vs. uniprot
Match: A0A835YLU3_9STRA (40S ribosomal protein S26 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLU3_9STRA) HSP 1 Score: 188 bits (477), Expect = 5.690e-60 Identity = 96/106 (90.57%), Postives = 100/106 (94.34%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSAEMRRNRDPPVRHRPKRD 318 MTVKRRNHGRNKKGRGHV RVRC STAKAIPKDKAIKRFIVRNIVDASSLRD+REASV+ NYALPKLYIKQYYCVEAAVHQRIVRSRSAE RRNR+PP R RPKR+ Sbjct: 1 MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSLRDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPARVRPKRE 106
BLAST of mRNA_L-elsbetiae_contig1084.777.1 vs. uniprot
Match: A0A7S2SUN8_9STRA (40S ribosomal protein S26 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUN8_9STRA) HSP 1 Score: 176 bits (445), Expect = 6.100e-55 Identity = 90/102 (88.24%), Postives = 94/102 (92.16%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSAEMRRNRDPPVRHR 306 MTVKRR+HGRNKKGRGHV RVRCAST KAIPKDKAIKRFIVRNIVDASS+RDIREAS F+NYALPKLYIKQYY VEAAVHQRIVRSRS E RRNR+PP R R Sbjct: 15 MTVKRRSHGRNKKGRGHVKRVRCASTGKAIPKDKAIKRFIVRNIVDASSMRDIREASAFENYALPKLYIKQYYSVEAAVHQRIVRSRSTENRRNREPPARFR 116
BLAST of mRNA_L-elsbetiae_contig1084.777.1 vs. uniprot
Match: A0A7S2MQP1_9STRA (40S ribosomal protein S26 n=4 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2MQP1_9STRA) HSP 1 Score: 174 bits (442), Expect = 2.400e-54 Identity = 87/100 (87.00%), Postives = 93/100 (93.00%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSAEMRRNRDPPVR 300 MTVKRRNHGRNKKGRGHV RVRCAST KAIPKDKAIKRFIVRNIVDASS+RDIR+AS F+ YALPK+YIKQYYC+EAAVHQRIVRSRS E RRNR+PP R Sbjct: 24 MTVKRRNHGRNKKGRGHVKRVRCASTGKAIPKDKAIKRFIVRNIVDASSMRDIRDASAFEAYALPKIYIKQYYCIEAAVHQRIVRSRSIENRRNREPPAR 123
BLAST of mRNA_L-elsbetiae_contig1084.777.1 vs. uniprot
Match: A0A7S3MCB3_9STRA (40S ribosomal protein S26 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCB3_9STRA) HSP 1 Score: 167 bits (424), Expect = 6.860e-52 Identity = 84/103 (81.55%), Postives = 93/103 (90.29%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSAEMRRNRDPPVRHRP 309 MTVKRRNHGRNK GRGHV RVRC STAKAIPKDKAIKRF+VRNIVD+S+LRDI+E+S ++NY LPKLYIKQYYC+EAAVHQRIVR RSA R+NR PPVR RP Sbjct: 1 MTVKRRNHGRNKHGRGHVKRVRCVSTAKAIPKDKAIKRFLVRNIVDSSALRDIKESSAYENYQLPKLYIKQYYCIEAAVHQRIVRVRSALDRKNRAPPVRVRP 103
BLAST of mRNA_L-elsbetiae_contig1084.777.1 vs. uniprot
Match: A0A7S3K046_9STRA (40S ribosomal protein S26 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K046_9STRA) HSP 1 Score: 166 bits (419), Expect = 3.500e-51 Identity = 81/102 (79.41%), Postives = 92/102 (90.20%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSAEMRRNRDPPVRHR 306 M VKRR HGRNKKGRGHV+RVRC ST KAIPKDKAIKRF+VRNIVDASS+RDIR+AS +++YALPKLYIKQYYC+EAAVHQRIVR RS R+NR+PP+R R Sbjct: 1 MAVKRRAHGRNKKGRGHVLRVRCVSTGKAIPKDKAIKRFVVRNIVDASSMRDIRDASAYESYALPKLYIKQYYCIEAAVHQRIVRLRSRTERKNREPPMRRR 102
BLAST of mRNA_L-elsbetiae_contig1084.777.1 vs. uniprot
Match: A0A7S0GMG9_9STRA (40S ribosomal protein S26 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GMG9_9STRA) HSP 1 Score: 165 bits (418), Expect = 5.630e-51 Identity = 84/100 (84.00%), Postives = 89/100 (89.00%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSAEMRRNRDPPVR 300 MTVKRRNHGRNKKGRGHV RVRCAST KAIPKDKAIKRFIVRNIVDASSLRDI+EAS +D+Y LPKLY+K YYCVEAAVHQRIVR RS E R+ R PP R Sbjct: 1 MTVKRRNHGRNKKGRGHVKRVRCASTGKAIPKDKAIKRFIVRNIVDASSLRDIKEASAYDDYTLPKLYLKMYYCVEAAVHQRIVRGRSREGRKIRTPPPR 100
BLAST of mRNA_L-elsbetiae_contig1084.777.1 vs. uniprot
Match: A0A485LRR7_9STRA (40S ribosomal protein S26 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRR7_9STRA) HSP 1 Score: 166 bits (420), Expect = 7.400e-51 Identity = 81/105 (77.14%), Postives = 92/105 (87.62%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSAEMRRNRDPPVRHRPKR 315 MTVKRRNHGRNKK RGHV RV C STAK IPKDKAIKRF VRNIVDAS++RD++EASV++ YALPK+YIK YYC+EAA+HQRIVR RS E RRNR+PP R RPK+ Sbjct: 32 MTVKRRNHGRNKKNRGHVKRVHCVSTAKLIPKDKAIKRFTVRNIVDASAMRDLKEASVYETYALPKIYIKNYYCIEAAIHQRIVRVRSVEGRRNREPPARIRPKK 136
BLAST of mRNA_L-elsbetiae_contig1084.777.1 vs. uniprot
Match: A0A067D0A6_SAPPC (40S ribosomal protein S26 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D0A6_SAPPC) HSP 1 Score: 165 bits (417), Expect = 8.000e-51 Identity = 79/105 (75.24%), Postives = 94/105 (89.52%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSAEMRRNRDPPVRHRPKR 315 MTVKRRNHGRNKKGRGHV RV C STAK IPKDKAIKRF+VRN+VDAS++RD++EASV+++YALPK+YIK YY +EAA+HQRIVR RS + R+NR+PP R RPKR Sbjct: 1 MTVKRRNHGRNKKGRGHVKRVHCVSTAKLIPKDKAIKRFVVRNMVDASAMRDLKEASVYESYALPKIYIKNYYSIEAAIHQRIVRVRSVDGRKNREPPARFRPKR 105
BLAST of mRNA_L-elsbetiae_contig1084.777.1 vs. uniprot
Match: A0A6S9R5Y9_CHRCT (40S ribosomal protein S26 n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6S9R5Y9_CHRCT) HSP 1 Score: 165 bits (417), Expect = 2.050e-50 Identity = 83/103 (80.58%), Postives = 91/103 (88.35%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSAEMRRNRDPPVRHRP 309 MTVKRR HGRNKKGRGHV RVRC ST KAIPKDKAIKRFIVRNIV+AS+LRDIREAS +NY LPK+YIKQYY VEAA+HQR+VR RS E RRNR+PP R+RP Sbjct: 14 MTVKRRAHGRNKKGRGHVNRVRCVSTGKAIPKDKAIKRFIVRNIVEASALRDIREASCIENYQLPKIYIKQYYSVEAAIHQRVVRVRSREARRNREPPQRNRP 116 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1084.777.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1084.777.1 >prot_L-elsbetiae_contig1084.777.1 ID=prot_L-elsbetiae_contig1084.777.1|Name=mRNA_L-elsbetiae_contig1084.777.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=107bp MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLback to top mRNA from alignment at L-elsbetiae_contig1084:19363..23213- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1084.777.1 ID=mRNA_L-elsbetiae_contig1084.777.1|Name=mRNA_L-elsbetiae_contig1084.777.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3851bp|location=Sequence derived from alignment at L-elsbetiae_contig1084:19363..23213- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1084:19363..23213- >mRNA_L-elsbetiae_contig1084.777.1 ID=mRNA_L-elsbetiae_contig1084.777.1|Name=mRNA_L-elsbetiae_contig1084.777.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=642bp|location=Sequence derived from alignment at L-elsbetiae_contig1084:19363..23213- (Laminarionema elsbetiae ELsaHSoW15)back to top |