mRNA_L-elsbetiae_contig10828.770.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10828.770.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE) HSP 1 Score: 152 bits (384), Expect = 4.890e-42 Identity = 77/186 (41.40%), Postives = 115/186 (61.83%), Query Frame = 2 Query: 11 LNEDSADLHTFAEHWGNFGLLQFALAFLDQDALLAVEIPTKLCFN---CPAWFRAKVYVERLFSAEQMPTDNNAPGILREGAAVARFLEPAEELLSTKYAAVGLVEDWDGSMRLFDRAVRLPNYSWKKASAAQRAQNKNK-FAAEEHETLETAWSDSMIKRFLWLDILLYDHAVSIHNKQLKEYGL 556 L + DLHTFA+HWGN+GL QF+LAF+ + + A E + P W+R K Y E F EQ G + A++ L+P E+LLS Y+AVG++E W+ SM LF++A+++P+++W+ AS +N +K EE L AW D ++ + LWLDI LYDHAV++HNKQ++E+G+ Sbjct: 46 LKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASND-LAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGI 230
BLAST of mRNA_L-elsbetiae_contig10828.770.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI) HSP 1 Score: 147 bits (370), Expect = 4.060e-39 Identity = 76/195 (38.97%), Postives = 122/195 (62.56%), Query Frame = 2 Query: 14 NEDSADLHTFAEHWGNFGLLQFALAFLDQDALLAVEIP---TKLCF------NCPAWFRAKVYVERLFSAEQMPTDN---NAPGILREGAA-VARFLEPAEELLSTKYAAVGLVEDWDGSMRLFDRAVRLPNYSWKKASAAQRAQNKN-KFAAEEHETLETAWSDSMIKRFLWLDILLYDHAVSIHNKQLKEYGL 556 N D DL+ FAEHWG+FGL QFALAF+ + LLA ++ T +C +CP W+ K+Y+++ ++ + + G GAA ++ L+P +ELL+ +YAAVG++E W+ S+ LF+ A+ +P + W + + +N + F EE E L +W+D ++R+L LD+LLYD+AVS+HN+Q+ +YGL Sbjct: 106 NADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300
BLAST of mRNA_L-elsbetiae_contig10828.770.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE) HSP 1 Score: 145 bits (366), Expect = 2.320e-38 Identity = 75/182 (41.21%), Postives = 116/182 (63.74%), Query Frame = 2 Query: 20 DSADLHTFAEHWGNFGLLQFALAFLDQDALLAVEIPTKLCFNCPAWFRAKVYVE-RLFSAEQMPTDNN-APGILREGAAVARFLEPAEELLSTKYAAVGLVEDWDGSMRLFDRAVRLPNYSWKKASAAQRAQNKNKFAAEEHETLETAWSDSMIKRFLWLDILLYDHAVSIHNKQLKEYGLS 559 + D++ FAEHWGN G++QFALAF D + +L E+ + P W++AK+Y E RL + + T N + + + + L+P EELL +KYAAVG++E W+ SM LFD A++LP ++W SA+ +N + A+ ++ L + +D ++K+ LWLDILLY+HA S+H QL YGL+ Sbjct: 146 EDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEVKS------PPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDSKAK-NDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGLA 320
BLAST of mRNA_L-elsbetiae_contig10828.770.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE) HSP 1 Score: 144 bits (362), Expect = 1.480e-37 Identity = 73/192 (38.02%), Postives = 110/192 (57.29%), Query Frame = 2 Query: 11 LNEDSADLHTFAEHWGNFGLLQFALAFLDQDALLAVEIPTKLCFNC--------PAWFRAKVYVERLFSAEQMPTDNNAPGILREGAAVARFLEPAEELLSTKYAAVGLVEDWDGSMRLFDRAVRLPNYSWKKASAAQRAQNK--NKFAAEEHETLETAWSDSMIKRFLWLDILLYDHAVSIHNKQLKEYGL 556 L+ DL TFAEHWGN+GL QFALA + + + E+ ++ C PAW+R K Y+ +P ++ G + + +A+FL A+E LST+YAAVG++E+WD SM LF+R + L + W K +N ++F L+ AW +K+F+WLDILLYDHA+S+H Q+ + G+ Sbjct: 157 LDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLH-------LPHQDDFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341
BLAST of mRNA_L-elsbetiae_contig10828.770.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE) HSP 1 Score: 139 bits (351), Expect = 3.970e-36 Identity = 71/182 (39.01%), Postives = 109/182 (59.89%), Query Frame = 2 Query: 20 DSADLHTFAEHWGNFGLLQFALAFLDQDALLAVEIPTKLCFNCPAWFRAKVYVE-RLFSAEQMPTDNNAPGILR-EGAAVARFLEPAEELLSTKYAAVGLVEDWDGSMRLFDRAVRLPNYSWKKASAAQRAQNKNKFAAEEHETLETAWSDSMIKRFLWLDILLYDHAVSIHNKQLKEYGLS 559 + D++ FA+HWGN+ LLQFAL +DQ + A E+ + PAWF+AK+Y E RL M T N + + L+P EELL + YAAVG++E W SM LFD A+ +P ++W ASA+ + E+ L A +D ++++++WLD+LLY++A S+H +QL+ Y L+ Sbjct: 145 EDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEEV------DAPAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIVEKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDLA 320
BLAST of mRNA_L-elsbetiae_contig10828.770.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI) HSP 1 Score: 119 bits (297), Expect = 2.440e-27 Identity = 69/198 (34.85%), Postives = 109/198 (55.05%), Query Frame = 2 Query: 11 LNEDSADLHTFAEHWGNFGLLQFALAFLDQDALLA-VEIPTKLCFN------CPAWFRAKVYVERLFSAEQ-MPTDNNAPGILREGAAVAR-----FLEPAEELLSTKYAAVGLVEDWDGSMRLFDRAVRLPNYSWKKASAA---QRAQNKNKFAAEEHETLETAWSDSMIKRFLWLDILLYDHAVSIHNKQLKEYGL 556 ++ DL TFA+HWGNF + QFAL F+ D + + P + W++ K+Y+ER + +P + A + + AA L+PA +L+ + Y AVG++E W+ ++ LFD A+ +P W A QR KNK E ETL+ AW+DS +K+++ LD+LLY+HAV + ++Q + YGL Sbjct: 265 VDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRL--ESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460
BLAST of mRNA_L-elsbetiae_contig10828.770.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI) HSP 1 Score: 107 bits (266), Expect = 5.090e-23 Identity = 63/191 (32.98%), Postives = 102/191 (53.40%), Query Frame = 2 Query: 11 LNEDSADLHTFAEHWGNFGLLQFALAFLDQDALLAVEIPTKLCFNCPAWFRAKVYVER--------LFSAEQMPTDNNAPGILREGAAVARFLEPAEELLSTKYAAVGLVEDWDGSMRLFDRAVRLPNYSWKKASAAQRAQNKNKFAAE-EHETLETAWSDSMIKRFLWLDILLYDHAVSIHNKQLKEYGL 556 + DL TFA+HWGNF L QFAL F+ D + ++ K+Y+ER L E M +A A + L+PA +L+ Y AVG++E W+ ++RLFD + +P +W++ A + + + E ETL+ AW+DS +K+++ LD+LLY+HAV + ++Q + +GL Sbjct: 286 MQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQEYQL--------------KMYLERPQKEDGGVLGQREAMTAHQDAAAT--PDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460
BLAST of mRNA_L-elsbetiae_contig10828.770.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI) HSP 1 Score: 103 bits (257), Expect = 5.120e-22 Identity = 61/194 (31.44%), Postives = 97/194 (50.00%), Query Frame = 2 Query: 11 LNEDSADLHTFAEHWGNFGLLQFALAFLDQDALL----------AVEIPTKLCFNCPAWFRAKVYVERLFSAEQMPTDNNAPGILREGAAVARFLEPAEELLSTKYAAVGLVEDWDGSMRLFDRAVRLPNYSWKKASAAQRAQNKN-KFAAEEHETLETAWSDSMIKRFLWLDILLYDHAVSIHNKQLKEYGLS 559 ++ + DL TFA HWGNF L QFAL F+ D + A+ + + P W+ K+++ D+ +P EG + P +LL YA VG++EDW+ ++ LFD A+ +P +W++ N + +F E+ + L+ A SD I + L LD+ LY AV I N+Q YG++ Sbjct: 202 VSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGV----ADDTSP----EGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGIA 387
BLAST of mRNA_L-elsbetiae_contig10828.770.1 vs. uniprot
Match: D8LGP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP0_ECTSI) HSP 1 Score: 52.8 bits (125), Expect = 8.790e-5 Identity = 34/94 (36.17%), Postives = 47/94 (50.00%), Query Frame = 2 Query: 278 ELLSTKYAAVGLVEDWDGSMRLFDRAVRLPNYSWKKASAAQRAQNKNKFAAEEHETLET-AWSDSMIKRFLWLDILLYDHAVSIHNKQLKEYGL 556 +LL AVG+VE++D M LFDRA P W NKN+ E T A IK +L L ILLYDHA+ + + +++G+ Sbjct: 106 KLLRDNSKAVGVVEEFDSKMALFDRAGVTPGTRWAATYRKLGVANKNEAPDTEQSTAPRHALLSEEIKPYLRLAILLYDHAMVVFHDLTRQHGI 199 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10828.770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10828.770.1 >prot_L-elsbetiae_contig10828.770.1 ID=prot_L-elsbetiae_contig10828.770.1|Name=mRNA_L-elsbetiae_contig10828.770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=120bp MPTDNNAPGILREGAAVARFLEPAEELLSTKYAAVGLVEDWDGSMRLFDRback to top mRNA from alignment at L-elsbetiae_contig10828:4987..5746+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10828.770.1 ID=mRNA_L-elsbetiae_contig10828.770.1|Name=mRNA_L-elsbetiae_contig10828.770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=760bp|location=Sequence derived from alignment at L-elsbetiae_contig10828:4987..5746+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10828:4987..5746+ >mRNA_L-elsbetiae_contig10828.770.1 ID=mRNA_L-elsbetiae_contig10828.770.1|Name=mRNA_L-elsbetiae_contig10828.770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=720bp|location=Sequence derived from alignment at L-elsbetiae_contig10828:4987..5746+ (Laminarionema elsbetiae ELsaHSoW15)back to top |