mRNA_L-elsbetiae_contig10791.737.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10791.737.1 vs. uniprot
Match: D7G8X1_ECTSI (Histone deacetylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X1_ECTSI) HSP 1 Score: 491 bits (1263), Expect = 7.080e-167 Identity = 237/268 (88.43%), Postives = 253/268 (94.40%), Query Frame = 1 Query: 4 CQVFEELYDYCCAVAGASLHAADRLCRGHADVAINWGGGRHHAKKGEAAGFCYVNDGVLAVLHLGKAFKRVLVIDIDVHHGDGVQEAFYMSNKVMTMSFHHLAKGFFPGAGQCSETGAGNGRDFNLNIPLKEGCGDASFLRVFASALGSVAEGFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCVELVVSLEVPLLLLGGGGYCPTDTARLWTSLTAAAVGADAVAALPATVPDHAYFPLYGPDFRMATREKKTLPDRNDDIFLGR 807 C+VFEELY++CCAVAGASLHAADRLCRG ADVAINWGGGRHHAKKGEAAGFCYVND VLAVLHL K F VL+IDIDVHHGDGVQ+AFYMSNKVMTMSFHH++KGFFPGAGQCSETGAGNGRD+NLNIPLKEGCGDASFLRVF SA +V E FQPEAVVLLCGADTLSADPLGPFNLTSAGVRSC+ELV++LE+PLLLLGGGGYCPTDTARLWTSLTAAAVGADA+AALPATVPDH YFPLYGPDFRMAT+EK TLPD+NDD FL R Sbjct: 501 CEVFEELYEHCCAVAGASLHAADRLCRGDADVAINWGGGRHHAKKGEAAGFCYVNDCVLAVLHLAKTFDTVLIIDIDVHHGDGVQDAFYMSNKVMTMSFHHVSKGFFPGAGQCSETGAGNGRDYNLNIPLKEGCGDASFLRVFTSAFQAVTEAFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCLELVMALELPLLLLGGGGYCPTDTARLWTSLTAAAVGADALAALPATVPDHCYFPLYGPDFRMATKEK-TLPDKNDDDFLDR 767
BLAST of mRNA_L-elsbetiae_contig10791.737.1 vs. uniprot
Match: A0A6H5JLL7_9PHAE (Histone deacetylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL7_9PHAE) HSP 1 Score: 482 bits (1241), Expect = 6.870e-164 Identity = 234/268 (87.31%), Postives = 250/268 (93.28%), Query Frame = 1 Query: 4 CQVFEELYDYCCAVAGASLHAADRLCRGHADVAINWGGGRHHAKKGEAAGFCYVNDGVLAVLHLGKAFKRVLVIDIDVHHGDGVQEAFYMSNKVMTMSFHHLAKGFFPGAGQCSETGAGNGRDFNLNIPLKEGCGDASFLRVFASALGSVAEGFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCVELVVSLEVPLLLLGGGGYCPTDTARLWTSLTAAAVGADAVAALPATVPDHAYFPLYGPDFRMATREKKTLPDRNDDIFLGR 807 C+VFEELY++CCAVAGASLHAADRLCRG ADVAINWGGGRHHAKKGEAAGFCYVND VLAVLHL K F VL IDIDVHHGDGVQ+AFYMS+KVMTMSFHH++KGFFPGAGQCSETGAGNGR +NLNIPLKEGCGD+SFLRVF SAL +V FQPEAVVLLCGADTLSADPLGPFNLTSAGVRSC+ELV++LE+PLLLLGGGGYCPTDTARLWTSLTAAAVGADA+AALP TVPDH YFPLYGPDFRMATR KKTLPD+NDD FL R Sbjct: 475 CEVFEELYEHCCAVAGASLHAADRLCRGDADVAINWGGGRHHAKKGEAAGFCYVNDCVLAVLHLAKTFDTVLTIDIDVHHGDGVQDAFYMSDKVMTMSFHHVSKGFFPGAGQCSETGAGNGRHYNLNIPLKEGCGDSSFLRVFTSALQAVTGAFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCLELVMALELPLLLLGGGGYCPTDTARLWTSLTAAAVGADALAALPVTVPDHCYFPLYGPDFRMATR-KKTLPDKNDDDFLDR 741
BLAST of mRNA_L-elsbetiae_contig10791.737.1 vs. uniprot
Match: A0A835YMW5_9STRA (Histone deacetylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMW5_9STRA) HSP 1 Score: 291 bits (745), Expect = 5.470e-94 Identity = 146/262 (55.73%), Postives = 184/262 (70.23%), Query Frame = 1 Query: 4 CQVFEELYDYCCAVAGASLHAADRLCRGHADVAINWGGGRHHAKKGEAAGFCYVNDGVLAVLHLGKAFKRVLVIDIDVHHGDGVQEAFYMSNKVMTMSFHHLAKGFFPG-AGQCSETGAGNGRDFNLNIPLKEGCGDASFLRVFASALGSVAEGFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCVELVVSLEVPLLLLGGGGYCPTDTARLWTSLTAAAVGADAVAALPATVPDHAYFPLYGPDFRMATREKKTLPDRN 786 C+VF L++Y CAVAGASL AA L RG ADVAINWGGGRHHA + AAGFC+VND LA LHL + FKRVL +D+DVHH DGVQ+AFY S+ V+ +S HH + GFFP AG ETG G G +N+N+PL E C DA++ VF + + + F+P VVL CGAD L ADP+G NLT+ G+++CV V++ +P L+LGGGGY TARLWT+LTA A+G A ALP++VPDH +F YGP F M T ++ L D N Sbjct: 80 CEVFPGLWNYACAVAGASLQAAALLARGAADVAINWGGGRHHASRARAAGFCFVNDCTLATLHLLRKFKRVLYVDVDVHHPDGVQDAFYQSDAVLCLSLHHWSPGFFPHPAGAPHETGRGRGAGYNVNVPLAERCCDAAYQGVFDAVXXAAVDAFRPACVVLQCGADALGADPIGRLNLTTRGLQACVRRVIAARLPTLVLGGGGYDGAATARLWTALTATAIGEGAEEALPSSVPDHPHFARYGPSFDMHTAPRR-LRDAN 340
BLAST of mRNA_L-elsbetiae_contig10791.737.1 vs. uniprot
Match: W4GJY7_9STRA (Histone deacetylase n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GJY7_9STRA) HSP 1 Score: 278 bits (710), Expect = 4.340e-89 Identity = 146/260 (56.15%), Postives = 177/260 (68.08%), Query Frame = 1 Query: 13 FEELYDYCCAVAGASLHAADRLCRGHADVAINWGGGRHHAKKGEAAGFCYVNDGVLAVLHLGKAF--KRVLVIDIDVHHGDGVQEAFYMSNKVMTMSFHHLAKGFFPGAGQCSETGAGNGRDFNLNIPLKEGCGDASFLRVFASALGSVAEGFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCVELVVSLEVPLLLLGGGGYCPTDTARLWTSLTAAAVGADAVAALPATVPDHAYFPLYGPDFRMATREKKTLPDRN 786 F L+ YC VAGASL AA L D++INWGGGRHHAKK A+GFCYVND VLAV +L + +VLVIDIDVHHGDGV+EAFY S++V T+SFH LA+GFFPG G + G G GR NLN+PL +G D FL VF + +VAE F+P VV+ CG DTLS DPLG FNLT+ G+ C+E+V +E+PLL+LGGGGY D AR + +LTA AV LP VPDH YFP YGP F M T K+ ++N Sbjct: 91 FPGLFAYCTFVAGASLTAAKLLVSKTVDISINWGGGRHHAKKDHASGFCYVNDVVLAVDYLLQHVPSSKVLVIDIDVHHGDGVEEAFYFSSQVFTLSFHKLARGFFPGTGSTASIGRGAGRHRNLNVPLDDGITDDQFLEVFELVVQAVAEAFEPSHVVMTCGVDTLSTDPLGTFNLTATGLCWCLEVVKEMELPLLVLGGGGYNEADAARCFAALTATAVDQP----LPQDVPDHDYFPKYGPHFEMRTTSVKSRLNKN 346
BLAST of mRNA_L-elsbetiae_contig10791.737.1 vs. uniprot
Match: A0A024U3H9_9STRA (Histone deacetylase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U3H9_9STRA) HSP 1 Score: 273 bits (699), Expect = 3.050e-87 Identity = 146/261 (55.94%), Postives = 175/261 (67.05%), Query Frame = 1 Query: 13 FEELYDYCCAVAGASLHAADRLCRGHADVAINWGGGRHHAKKGEAAGFCYVNDGVLAV---LHLGKAFKRVLVIDIDVHHGDGVQEAFYMSNKVMTMSFHHLAKGFFPGAGQCSETGAGNGRDFNLNIPLKEGCGDASFLRVFASALGSVAEGFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCVELVVSLEVPLLLLGGGGYCPTDTARLWTSLTAAAVGADAVAALPATVPDHAYFPLYGPDFRMATREKKTLPDRN 786 F L+ YC VAGASL A+ L G D+AINWGGGRHHAKK A+GFCYVND VLAV LH A K VLVIDIDVHHGDGV+EAFY S++V T+SFH A+GFFPG G S G G GR NLN+PL +G D F VF + ++ E F P VV+ CG DTL+ DPLG FNLT+ G+ C+++V LE+PLLLLGGGGY +D AR + +LTA A+ LP V DH YFP+YGP F MAT K ++N Sbjct: 90 FPGLFSYCSYVAGASLTASKLLVSGSIDIAINWGGGRHHAKKDHASGFCYVNDVVLAVDYLLHNIHACK-VLVIDIDVHHGDGVEEAFYFSSQVFTLSFHKFARGFFPGTGSPSSIGRGAGRHRNLNVPLDDGITDNQFFEVFEVVVQAIVEAFMPTHVVMTCGVDTLATDPLGTFNLTATGLCWCLDVVKELELPLLLLGGGGYNESDAARCFAALTATAIDQ----MLPDQVSDHDYFPMYGPHFGMATAPVKARVNKN 345
BLAST of mRNA_L-elsbetiae_contig10791.737.1 vs. uniprot
Match: A0A6G0XH97_9STRA (Histone deacetylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XH97_9STRA) HSP 1 Score: 282 bits (722), Expect = 1.420e-84 Identity = 146/255 (57.25%), Postives = 176/255 (69.02%), Query Frame = 1 Query: 13 FEELYDYCCAVAGASLHAADRLCRGHADVAINWGGGRHHAKKGEAAGFCYVNDGVLAVLHLGKAF--KRVLVIDIDVHHGDGVQEAFYMSNKVMTMSFHHLAKGFFPGAGQCSETGAGNGRDFNLNIPLKEGCGDASFLRVFASALGSVAEGFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCVELVVSLEVPLLLLGGGGYCPTDTARLWTSLTAAAVGADAVAALPATVPDHAYFPLYGPDFRMATREKKT 771 F +++YC VAGASL AA LC DVAINWGGGRHHAKK +A+GFCYVND VLAV +L + +VLVIDID+HHGDGV+EAFY S++V T+SFH LA+GFFPG G S TG G GR NLN+PL +G D FL VF + V + FQP +V+ CG DTLS DPLG FNLTS GV CVE+V ++PLLLLGGGGYC D AR + ++TAA V + LP VPDH + P YGP F A + K+ Sbjct: 64 FPGMFEYCHYVAGASLTAAKLLCSQTVDVAINWGGGRHHAKKDQASGFCYVNDIVLAVDYLLRQHLQAKVLVIDIDIHHGDGVEEAFYFSSRVFTLSFHKLARGFFPGTGASSSTGQGAGRYRNLNVPLDDGITDEQFLEVFELIVEPVVDAFQPTYIVMTCGVDTLSTDPLGTFNLTSTGVTWCVEVVREFQLPLLLLGGGGYCEADAARCFAAVTAALVDQE----LPMQVPDHDFLPQYGPHFSTAIKAVKS 314
BLAST of mRNA_L-elsbetiae_contig10791.737.1 vs. uniprot
Match: A0A3Q2CY37_CYPVA (Histone deacetylase 8 n=6 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A3Q2CY37_CYPVA) HSP 1 Score: 266 bits (680), Expect = 1.820e-84 Identity = 132/268 (49.25%), Postives = 176/268 (65.67%), Query Frame = 1 Query: 4 CQVFEELYDYCCAVAGASLHAADRLCRGHADVAINWGGGRHHAKKGEAAGFCYVNDGVLAVLHLGKAFKRVLVIDIDVHHGDGVQEAFYMSNKVMTMSFHHLAKGFFPGAGQCSETGAGNGRDFNLNIPLKEGCGDASFLRVFASALGSVAEGFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCVELVVSLEVPLLLLGGGGYCPTDTARLWTSLTAAAVGADAVAALPATVPDHAYFPLYGPDFRMATREKKTLPDRNDDIFLGR 807 C V E ++DY AV GA+L AA+ L DVAINW GG HHAKK EA+GFCYVND VL +L L + F+RVL +D+D+HHGDGV+EAF ++KVMT+S H + GFFPG G S+TG G GR + +N+PL++G D + ++F S + V F PEAV++ GADT++ DP+ FN+T GV C++ V+ ++P LLLGGGGY +TAR WT LTA +G L + +PDH +F YGPD+ + PDRND L R Sbjct: 101 CPVVEGIFDYAAAVGGATLTAAECLLNQKCDVAINWAGGWHHAKKDEASGFCYVNDAVLGILKLREKFERVLYVDVDLHHGDGVEEAFSFTSKVMTVSLHKFSPGFFPGTGDLSDTGLGKGRWYAVNVPLEDGIQDDRYFQIFTSIMQEVRTQFNPEAVLMQLGADTMAGDPMCSFNMTPVGVAKCLQHVLQWQLPALLLGGGGYNLANTARCWTFLTATVLGKT----LSSEIPDHEFFTEYGPDYSLEI-SPSCRPDRNDSKHLER 363
BLAST of mRNA_L-elsbetiae_contig10791.737.1 vs. uniprot
Match: A0A485LHZ1_9STRA (Histone deacetylase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHZ1_9STRA) HSP 1 Score: 265 bits (678), Expect = 2.110e-84 Identity = 138/243 (56.79%), Postives = 165/243 (67.90%), Query Frame = 1 Query: 10 VFEELYDYCCAVAGASLHAADRLCRGHADVAINWGGGRHHAKKGEAAGFCYVNDGVLAVLHLGK--AFKRVLVIDIDVHHGDGVQEAFYMSNKVMTMSFHHLAKGFFPGAGQCSETGAGNGRDFNLNIPLKEGCGDASFLRVFASALGSVAEGFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCVELVVSLEVPLLLLGGGGYCPTDTARLWTSLTAAAVGADAVAALPATVPDHAYFPLY 732 VF+ +++YC VAGASL AA L D+A+NWGGGRHHAKKG+A+GFCYVND VLAV +L + RVLV+DIDVHHGDGV+EAFY S+ V T+SFH AKGFFPG G S G G GR N N+PL +G D F VF + + + F P +V+ CG DTLS D LG FNLT+ G+ C+ELV E+PLLLLGGGGYC D AR + +LTA AV LP VPDH YFPLY Sbjct: 95 VFDGMFEYCQYVAGASLTAAKLLLSNTVDIAMNWGGGRHHAKKGQASGFCYVNDVVLAVDYLVQHVPHARVLVLDIDVHHGDGVEEAFYFSSHVCTVSFHKFAKGFFPGTGASSSIGQGAGRFKNFNVPLDDGITDEKFFEVFELIVQPLVDAFSPTHIVMTCGVDTLSTDLLGTFNLTANGIGWCLELVKEFELPLLLLGGGGYCEADAARCFAALTATAVDQP----LPDDVPDHDYFPLY 333
BLAST of mRNA_L-elsbetiae_contig10791.737.1 vs. uniprot
Match: A0A8D2ZL07_SCOMX (Histone deacetylase n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D2ZL07_SCOMX) HSP 1 Score: 265 bits (677), Expect = 2.560e-84 Identity = 131/266 (49.25%), Postives = 176/266 (66.17%), Query Frame = 1 Query: 4 CQVFEELYDYCCAVAGASLHAADRLCRGHADVAINWGGGRHHAKKGEAAGFCYVNDGVLAVLHLGKAFKRVLVIDIDVHHGDGVQEAFYMSNKVMTMSFHHLAKGFFPGAGQCSETGAGNGRDFNLNIPLKEGCGDASFLRVFASALGSVAEGFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCVELVVSLEVPLLLLGGGGYCPTDTARLWTSLTAAAVGADAVAALPATVPDHAYFPLYGPDFRMATREKKTLPDRNDDIFL 801 C V E +YDY +V GA+L AA L ++DVAINW GG HHAKK EA+GFCYVND VL +L L + F+RVL +D+D+HHGDGV++AF ++KVMT+S H + GFFPG G +TG G GR + +N+PL++G D + ++F S + V F PEAVV+ GADT++ DP+ FN+T GV C++ V+ ++P LLLGGGGY +TAR WT LTAA +G L + +PDH +F YGPD+ + PDRND L Sbjct: 78 CPVVEGIYDYAASVGGATLTAAQCLLDQNSDVAINWAGGWHHAKKDEASGFCYVNDAVLGILKLREKFERVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDLCDTGLGKGRWYAVNVPLEDGIKDDRYFQIFTSVMQEVRSQFNPEAVVMQLGADTMAGDPMCSFNMTPVGVGKCLQHVLQWQLPALLLGGGGYNLANTARCWTYLTAAVLGKT----LSSEIPDHEFFTKYGPDYSLEI-SPSCRPDRNDTKHL 338
BLAST of mRNA_L-elsbetiae_contig10791.737.1 vs. uniprot
Match: A0A2J6PXX4_9HELO (Histone deacetylase n=1 Tax=Hyaloscypha hepaticicola TaxID=2082293 RepID=A0A2J6PXX4_9HELO) HSP 1 Score: 267 bits (682), Expect = 1.090e-83 Identity = 134/266 (50.38%), Postives = 178/266 (66.92%), Query Frame = 1 Query: 10 VFEELYDYCCAVAGASLHAADRLCRGHADVAINWGGGRHHAKKGEAAGFCYVNDGVLAVLHLGKAFKRVLVIDIDVHHGDGVQEAFYMSNKVMTMSFHHLAKGFFPGAGQCSETGAGNGRDFNLNIPLKEGCGDASFLRVFASALGSVAEGFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCVELVVSLEVPLLLLGGGGYCPTDTARLWTSLTAAAVGADAVAALPATVPDHAYFPLYGPDFRMATREKKTLPDRNDDIFLGR 807 VF+ L+D+C AG S+ A RL RG D+AINW GG HHAKK EA+GFCYVND VLA+L L + +RVL IDIDVHHGDGV+EAFY +++VMT+S H + FFPG G + GA G+++++N PLK+G D+S+ +F +G V E ++PE +VL CGAD+L+ D LG FNL+SAG +CV V S VP L+LGGGGY + AR W+ T VG + + +PDH Y+ YGPDF++A R T P+ N +L R Sbjct: 113 VFDGLFDFCGISAGGSMEGAARLNRGKCDIAINWAGGLHHAKKVEASGFCYVNDIVLAILELLRFHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSLHKYGE-FFPGTGDVRDDGAAKGKNYSVNFPLKDGIDDSSYKYIFEKVIGKVMETYRPETIVLQCGADSLNGDKLGSFNLSSAGHANCVSFVKSFNVPTLVLGGGGYTLRNVARAWSYETGICVGQE----MEQDIPDHEYYGYYGPDFKLAIRPS-TAPNLNSREYLDR 372 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10791.737.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10791.737.1 >prot_L-elsbetiae_contig10791.737.1 ID=prot_L-elsbetiae_contig10791.737.1|Name=mRNA_L-elsbetiae_contig10791.737.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=270bp MCQVFEELYDYCCAVAGASLHAADRLCRGHADVAINWGGGRHHAKKGEAAback to top mRNA from alignment at L-elsbetiae_contig10791:323..6370- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10791.737.1 ID=mRNA_L-elsbetiae_contig10791.737.1|Name=mRNA_L-elsbetiae_contig10791.737.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6048bp|location=Sequence derived from alignment at L-elsbetiae_contig10791:323..6370- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10791:323..6370- >mRNA_L-elsbetiae_contig10791.737.1 ID=mRNA_L-elsbetiae_contig10791.737.1|Name=mRNA_L-elsbetiae_contig10791.737.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1620bp|location=Sequence derived from alignment at L-elsbetiae_contig10791:323..6370- (Laminarionema elsbetiae ELsaHSoW15)back to top |