mRNA_L-elsbetiae_contig10788.731.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10788.731.1
Unique NamemRNA_L-elsbetiae_contig10788.731.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10788.731.1 vs. uniprot
Match: D7FNB1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB1_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 1.720e-42
Identity = 77/85 (90.59%), Postives = 82/85 (96.47%), Query Frame = 1
Query:  499 MALLYPLDQVRAILQVDDELAKECSAPGGAGVLGALSRIVRRHGKAGLWRGMVPVLLTMGVSNFVYFYCFNGMKAALLARRHRLR 753
            MALLYPLDQVRAILQVDD+LAKECSAPGGAGVLGALSR+VRRHG+AGLWRGMVPVL+TMGVSNFVYFYCF GMKAALL+RR  LR
Sbjct:    1 MALLYPLDQVRAILQVDDDLAKECSAPGGAGVLGALSRLVRRHGRAGLWRGMVPVLITMGVSNFVYFYCFTGMKAALLSRRRVLR 85          
BLAST of mRNA_L-elsbetiae_contig10788.731.1 vs. uniprot
Match: A0A1Y1MST7_PHOPY (Uncharacterized protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MST7_PHOPY)

HSP 1 Score: 82.0 bits (201), Expect = 8.460e-15
Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = 1
Query:  463 HALSGAVGAVCAMALLYPLDQVRAILQVDDELAKECSAPGGAGVLGALSRIVRRHGKAGLWRGMVPVLLTMGVSNFVYFYCFNGMKAAL 729
            HA++G+VG+V AM   YPLD VR   Q++D  + +CS         AL R+++  G AGL+ G+ PVL+++G SNFVYFY F+G+K+ L
Sbjct:   13 HAIAGSVGSVVAMTTFYPLDTVRFRKQIEDTNSDDCST------YTALRRLLQTEGLAGLYAGIKPVLISLGTSNFVYFYTFHGLKSML 95          
BLAST of mRNA_L-elsbetiae_contig10788.731.1 vs. uniprot
Match: A0A3Q3KZE9_9TELE (Solute carrier family 25 member 17 n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=A0A3Q3KZE9_9TELE)

HSP 1 Score: 80.5 bits (197), Expect = 4.410e-14
Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 1
Query:  457 LAHALSGAVGAVCAMALLYPLDQVRAILQVDDELAKECSAPGGAGVLGALSRIVRRHGKAGLWRGMVPVLLTMGVSNFVYFYCFNGMKAALL 732
            L HA+SGAVG+V AM + YPLD  R  LQVDD   K  S P        L+ IV+  G    +RG  PV+ ++  SNFVYFYCF+G+KA+ L
Sbjct:   11 LVHAVSGAVGSVTAMTIFYPLDTARLRLQVDDH-RKAKSTPA------ILAEIVKEEGPLAPYRGWFPVICSLWCSNFVYFYCFHGLKASWL 95          
BLAST of mRNA_L-elsbetiae_contig10788.731.1 vs. uniprot
Match: A0A226EGU3_FOLCA (Peroxisomal membrane protein PMP34 n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226EGU3_FOLCA)

HSP 1 Score: 80.1 bits (196), Expect = 5.750e-14
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:  424 QPPVASSPPPPLAHALSGAVGAVCAMALLYPLDQVRAILQVDDELAKECSAPGGAGVLGALSRIVRRHGKAGLWRGMVPVLLTMGVSNFVYFYCFNGMKA 723
            +PPVA      L HAL+G+ G+V AM+  YPLD +RA LQ+DD +  +         L  L  + +R G   L+RG+VPVL ++ VSNFVYFY F+G+K+
Sbjct:    3 KPPVAILSYDNLVHALAGSAGSVTAMSAFYPLDTIRARLQLDDRVEAK-------NTLVMLIELTKREGIPSLYRGLVPVLQSLCVSNFVYFYSFHGLKS 95          
BLAST of mRNA_L-elsbetiae_contig10788.731.1 vs. uniprot
Match: A0A1D2NIK9_ORCCI (Peroxisomal membrane protein PMP34 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2NIK9_ORCCI)

HSP 1 Score: 79.7 bits (195), Expect = 7.660e-14
Identity = 43/94 (45.74%), Postives = 63/94 (67.02%), Query Frame = 1
Query:  457 LAHALSGAVGAVCAMALLYPLDQVRAILQVDDELAKECSAPGGAGVLGALSRIVRRHGKAGLWRGMVPVLLTMGVSNFVYFYCFNGMKAALLAR 738
            L HA++G++G+V AM++ YPLD VRA LQ+DD+   +         L  L  + RR G A L+RG++PVL ++ VSNFVYFY F+G+K+ +  R
Sbjct:   16 LVHAMAGSMGSVTAMSVFYPLDTVRARLQLDDKQEAK-------NTLVMLKELSRREGFATLYRGLLPVLESLCVSNFVYFYSFHGLKSYMSRR 102          
BLAST of mRNA_L-elsbetiae_contig10788.731.1 vs. uniprot
Match: UPI000C203B23 (peroxisomal membrane protein PMP34 isoform X1 n=2 Tax=Onthophagus taurus TaxID=166361 RepID=UPI000C203B23)

HSP 1 Score: 78.6 bits (192), Expect = 1.570e-13
Identity = 39/89 (43.82%), Postives = 59/89 (66.29%), Query Frame = 1
Query:  457 LAHALSGAVGAVCAMALLYPLDQVRAILQVDDELAKECSAPGGAGVLGALSRIVRRHGKAGLWRGMVPVLLTMGVSNFVYFYCFNGMKA 723
            L HA++GA G++ +M++ YPLD +R  LQV+D   K  S          L++I++  G   L+RG+ PVL+++G SNFVYFY F+G+KA
Sbjct:   12 LVHAIAGATGSIFSMSVFYPLDTIRFRLQVEDNNNKNLST------FEILTQILKTEGIEALYRGLAPVLVSLGASNFVYFYSFHGLKA 94          
BLAST of mRNA_L-elsbetiae_contig10788.731.1 vs. uniprot
Match: A0A7R8ULK9_HERIL (Hypothetical protein n=1 Tax=Hermetia illucens TaxID=343691 RepID=A0A7R8ULK9_HERIL)

HSP 1 Score: 77.4 bits (189), Expect = 5.410e-13
Identity = 39/87 (44.83%), Postives = 59/87 (67.82%), Query Frame = 1
Query:  463 HALSGAVGAVCAMALLYPLDQVRAILQVDDELAKECSAPGGAGVLGALSRIVRRHGKAGLWRGMVPVLLTMGVSNFVYFYCFNGMKA 723
            HA++GA G V AM++ YPLD VRA LQ++D   K+ S       +  L +++R  G   L+RG++PVL ++ +SNFVYFY F+G+K+
Sbjct:   16 HAVAGATGGVVAMSVFYPLDTVRARLQLEDSQIKKDS-----NTIEILKQLIREEGFTTLYRGLMPVLESLCISNFVYFYTFHGLKS 97          
BLAST of mRNA_L-elsbetiae_contig10788.731.1 vs. uniprot
Match: A0A0F8CDD2_LARCR (Peroxisomal membrane protein PMP34 n=3 Tax=Sciaenidae TaxID=30870 RepID=A0A0F8CDD2_LARCR)

HSP 1 Score: 77.4 bits (189), Expect = 5.570e-13
Identity = 44/95 (46.32%), Postives = 58/95 (61.05%), Query Frame = 1
Query:  457 LAHALSGAVGAVCAMALLYPLDQVRAILQVDDELAKECSAPGGAGVLGALSRIVRRHGKAGLWRGMVPVLLTMGVSNFVYFYCFNGMKAALLARR 741
            L HA+SGA+G+V AM + +PLD  R  LQVD+   K  S P        L+ IV+  G   L+RG  PV+ ++  SNFVYFYCF+G+KA  L  R
Sbjct:   11 LVHAVSGAMGSVTAMTVFFPLDTARLRLQVDEN-RKAKSTPA------ILAEIVKEEGLQALYRGWFPVICSLCCSNFVYFYCFHGLKANWLKGR 98          
BLAST of mRNA_L-elsbetiae_contig10788.731.1 vs. uniprot
Match: UPI001F03CB0A (peroxisomal membrane protein PMP34-like isoform X1 n=3 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03CB0A)

HSP 1 Score: 77.4 bits (189), Expect = 6.530e-13
Identity = 38/95 (40.00%), Postives = 60/95 (63.16%), Query Frame = 1
Query:  457 LAHALSGAVGAVCAMALLYPLDQVRAILQVDDELAKECSAPGGAGVLGALSRIVRRHGKAGLWRGMVPVLLTMGVSNFVYFYCFNGMKAALLARR 741
            L HAL+GA+G + ++++ +PLD  +  LQ+DDE   + +          +  IV   G + L+RG++PVL ++  SNFVYFY FNG+KAA + +R
Sbjct:   35 LVHALAGALGGISSLSIFFPLDTAKTRLQIDDERKAKTTWK-------VIYEIVHEEGLSSLYRGLLPVLSSLYCSNFVYFYTFNGLKAAYVTKR 122          
BLAST of mRNA_L-elsbetiae_contig10788.731.1 vs. uniprot
Match: A0A8C5FWF9_GADMO (Solute carrier family 25 member 17 n=4 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5FWF9_GADMO)

HSP 1 Score: 77.4 bits (189), Expect = 6.850e-13
Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 1
Query:  457 LAHALSGAVGAVCAMALLYPLDQVRAILQVDDELAKECSAPGGAGVLGALSRIVRRHGKAGLWRGMVPVLLTMGVSNFVYFYCFNGMKAALL 732
            L HA+SGAVG+V AM + +PLD  R  LQVD+   K  S P        LS IV+  G    +RG  PV+ ++  SNFVYFYCF+G+KA+ L
Sbjct:   35 LVHAVSGAVGSVTAMTVFFPLDTARLRLQVDEN-RKARSTPA------ILSEIVKEEGLLAPYRGWFPVICSLCCSNFVYFYCFHGLKASWL 119          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10788.731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNB1_ECTSI1.720e-4290.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Y1MST7_PHOPY8.460e-1546.07Uncharacterized protein n=1 Tax=Photinus pyralis T... [more]
A0A3Q3KZE9_9TELE4.410e-1448.91Solute carrier family 25 member 17 n=1 Tax=Mastace... [more]
A0A226EGU3_FOLCA5.750e-1445.00Peroxisomal membrane protein PMP34 n=1 Tax=Folsomi... [more]
A0A1D2NIK9_ORCCI7.660e-1445.74Peroxisomal membrane protein PMP34 n=1 Tax=Orchese... [more]
UPI000C203B231.570e-1343.82peroxisomal membrane protein PMP34 isoform X1 n=2 ... [more]
A0A7R8ULK9_HERIL5.410e-1344.83Hypothetical protein n=1 Tax=Hermetia illucens Tax... [more]
A0A0F8CDD2_LARCR5.570e-1346.32Peroxisomal membrane protein PMP34 n=3 Tax=Sciaeni... [more]
UPI001F03CB0A6.530e-1340.00peroxisomal membrane protein PMP34-like isoform X1... [more]
A0A8C5FWF9_GADMO6.850e-1347.83Solute carrier family 25 member 17 n=4 Tax=Gadus m... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10788contigL-elsbetiae_contig10788:1047..5653 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score160.6
Seed ortholog evalue4.4e-37
Seed eggNOG ortholog2880.D7FNB1
KEGG koko:K13354
KEGG TC2.A.29.20.1
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the allantoicase family
EggNOG OGsCOG4266@1,KOG0769@2759
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Ec32 ortholog descriptionMitochondrial substrate/solute carrier
Ec32 orthologEc-24_000080.1
Exons3
Model size753
Cds size354
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10788.731.1prot_L-elsbetiae_contig10788.731.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10788 1446..5653 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815297.5134676-UTR-L-elsbetiae_contig10788:1046..14451622815297.5134676-UTR-L-elsbetiae_contig10788:1046..1445Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10788 1047..1445 +
1691682823.3818095-UTR-L-elsbetiae_contig10788:1046..14451691682823.3818095-UTR-L-elsbetiae_contig10788:1046..1445Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10788 1047..1445 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815297.5251548-CDS-L-elsbetiae_contig10788:1445..15891622815297.5251548-CDS-L-elsbetiae_contig10788:1445..1589Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10788 1446..1589 +
1691682823.3983102-CDS-L-elsbetiae_contig10788:1445..15891691682823.3983102-CDS-L-elsbetiae_contig10788:1445..1589Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10788 1446..1589 +
1622815297.5344903-CDS-L-elsbetiae_contig10788:4348..45251622815297.5344903-CDS-L-elsbetiae_contig10788:4348..4525Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10788 4349..4525 +
1691682823.4073555-CDS-L-elsbetiae_contig10788:4348..45251691682823.4073555-CDS-L-elsbetiae_contig10788:4348..4525Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10788 4349..4525 +
1622815297.5454254-CDS-L-elsbetiae_contig10788:5620..56531622815297.5454254-CDS-L-elsbetiae_contig10788:5620..5653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10788 5621..5653 +
1691682823.4149601-CDS-L-elsbetiae_contig10788:5620..56531691682823.4149601-CDS-L-elsbetiae_contig10788:5620..5653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10788 5621..5653 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10788.731.1

>prot_L-elsbetiae_contig10788.731.1 ID=prot_L-elsbetiae_contig10788.731.1|Name=mRNA_L-elsbetiae_contig10788.731.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=118bp
MGSLAPAQQPPVASSPPPPLAHALSGAVGAVCAMALLYPLDQVRAILQVD
DELAKECSAPGGAGVLGALSRIVRRHGKAGLWRGMVPVLLTMGVSNFVYF
YCFNGMKAALLARRHRLR
back to top

mRNA from alignment at L-elsbetiae_contig10788:1047..5653+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10788.731.1 ID=mRNA_L-elsbetiae_contig10788.731.1|Name=mRNA_L-elsbetiae_contig10788.731.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4607bp|location=Sequence derived from alignment at L-elsbetiae_contig10788:1047..5653+ (Laminarionema elsbetiae ELsaHSoW15)
GGCGGCAGAGATCGAGATCGAGAGAGAGAGAGAGAGAGAGAGAGGCGGGG GGAGAGGGAGACGAAAATAGCAATAGCCCGCCTCAAAGGTCATGTAAGGA ATGCCGCACCGGATGTGCGAATGTCAATTTTGTGTCGCCGAAGCGGCGGA TCTTGGATGGGAACCTCCTAGCTGGTGTTTGTCGGAGACAACGGGGGGCT GCCTGTACACCTGTACCTTGTGTTAAGCGAGGAAACGCCTCTTCACTTTG GTTTTCTAGATACAATCAGCTTAATTTGTTCCCAGGTAGCCCTCCCTAAT CCATGTGGCGTCGGGCATGGCAACTCACCGTCGCATGGACAGCCAGCATT CAACTTACCTCTCTCTTCGGGTCATAACTCCCACAAAAAGTGTAAGGGGA TGGGATCACTAGCACCAGCGCAACAGCCGCCCGTGGCCTCGTCTCCGCCG CCGCCTCTTGCGCACGCCCTGTCCGGGGCTGTCGGTGCCGTGTGCGCGAT GGCTCTGCTATACCCCCTAGATCAAGTACGAGCGATCCTACAGGTATGGG CAAGAGAGGGGAGCAGACATAGAGAGAGAGGCCGTATGATGTTAACCGCA AGCCTGCATGTAGCAAACATGGAAAGCAATTGATAGACACATGATTGATT CCCTTCAAAGTCAGAGCTGTTTTTCTTTCTCGGGATGCTGCAGAGTTCTG AACACCGCACGCGCCAGCAGCAGTGCTTCTGTTGAAAAGCCGCTCGAGGT ACATAGGCAATCCAGTGACCATCGTCCTTTTCAGTGATATTTAATGCCGG AGTCCGCCTAGCTGTAAAGCCACGAGCCCATAACATATTTCACCACCAGG GTGACCATCCTGTAATCGGCGCTGTGTAATCCTTGCCCGGAGATCACATC ATCGGTGCAAGAGGTTCATCGCCTACTTGAGATGTTTGGCATGCGTGTCC TGTACTGAGCTTCAGAGACCAGAGGATTTTGTTGACCGCATGCATTAGCT CGTAGGTGAGACATGAGGAGATAGAAGGGAGAAAGGAGAAAGAAGAGAGA TGGCCAAACATCCACAACGGGGCCCCGCAACTCACACCTAGACGTCTCCC ATACAATATCGATCGGGATATTTCTATCTACGGGATATGGCACCGTCCAC CATATCTGTCAACCAGCTAATCCACTTCTAAACACGAACATGAGAAGCGG TGGTTACCACTGGACTACAAGTCAGCGCTGACTGGTAGTTCAGCAACGGT AGTCATGCTTTTCAACACTATCTACATTGTAAACTGGCGTCATCAACAGC CCCGCACAGCTGCAGGAGCTACCAGAAGCTGCGTACTCGCTTGTAGATAT GTACACAGATCGCAATCAGAGAGGTTGGTAGATGTACATCTAGTAACATA ATACGGGAACTGTGGTCGTTATGAGCAGCCCGGCTGTTTGAGCTTTCTGA CCCCTTCTGCTTGAACAGCTTCAACAGCTGCTGTTGACAAACGTCAGTTA TTCAGCTCTTTCCCGCAAACTTCAGCAGTCTTTTGTTTCAACCGTCCGCC GGTCAACGGCAAAAAACAGCCCTCCCTGTAAGGTTGAGATGGCACGCACG CACAGCCCCCCACTCGATAGCTCTCCGCCTATCTATGCACGGTGGATGGT TCTCGCTTCCCGAGGTGCAGGGTCTGCGGCCTGTTGGGTGCAGGGTCTGT GGGCTGTTGAGTGCAGGGTCTATGGACTGTTGGTTGCAAGCCACGCGCCA CGTGTCGACATAAGCAGGTTCTGTTTTTTAGTGAGGCAGATGTTGTCGCG CTGCGATCCCGCGCAAAAAACAGTCGTCACTTCCCTCAGAAACTCCATAC AAAAAGTGTTGCGCAACTCGAAACAGCAGTCAACAGCAGTCAACAAGTAA TCTAGCTACCGTTGGTGACACAAGATACCACACCCCCTGGACATACTTTG AAAGCTCGATTCCTCCCCAGCAAGAAGAGTGCCAGTGCCCAAAGGGGTGG CGTTTGGAAAGATCTAGTCGAGGGCTGTCCGAAAATGTGCCGTTTGGTGA TGGCACCCTCTTCGTCACGGAGTAATGGAGCTCTCAAATTCGATCCAGGG GGTGTGGTATCTTGTGTCACCTACGGTATGCTTGTCTTGCTGGTTTTGTT CAACATTATGACGAACACACGCGAACAAACACACACACACACGCGGAAAC CGGCGCAACATTGTTTCGCCGCGTTTTTGTTTCTTTCCCCCGGTGTTCAA CTTCTTGAAATCGTTTTGAAAAGGCTCCCTAAGTCAGGCAGCAGAGCGAC ATATAGGTATCGGACGCTCAGCTTTTGTCTGCCTCTCTTGCTTCATTCAC CCTCTGGAGTGTTTATCCACGAGCAACGTCTGAAAGGGAGAGTCTTCTAC ACATGTGCAGACGTTCTGCTTGTAGTCTATGGGCCTGGTGTCAACGGCAT TTTGTACAGCCTTTTTTATTGTTGTCTCTAACTCCAGTCGTATGCCTTTG TGAGGGTACACACAGTGGCGTTGTAATCGAGTGGTTTGTTTCTATCCTGG GCACTTGTATAGTGATATCTCCCCTGTTACTAATAACAGGCTCGACAAGA CAGTGTGGTTGTCATCTTGTGTATCGGACTATACTCGTGGGAGGTAGATG TTGCAGAAGGAGGATTGTGACAGCCTTTTGGTGTTTCCTTGGCTTGTCGC ATGTGGCGTACATGTAGGGGGAGGAGGCATACCGTAATCATGCGAAAGTT CGCACCCCCGTGTTAGCGTTTTTCTATCCACAACCGTTGTGGATAAATAC GCTATAGAAAAACGCGAACACGGGAGTGCGAACCTTTGCATGATTACGGC AATCAGAGGTCTCAAAAGTATCAAGATCTCTACCTGTATACTGGTAGTGT GTGAACTTCACTTTGACCTCACCGTCGACGAGGGAAAGGGACGGCTGAAT CCTTCTCGCGACAAAAAAATCTTAGGCAAGCACCGCAGAAGGGGGGAGCG AGGGCCTCGGGGAAAGGAACCCCTCTGTGTGACCACGGTTCAGTACTCTT GCAAGATGCCCTCGTGGCAAAGGAGCCCATCGAGCACTGGAAATAAAAAT AAAATAAGAAAAAAAGCAAAATAAAATAAGAGAGAAAGCAAAATAAAAGT GTACATATTTAGCTGTTACTGCGTTCGCGGACTGCTACAAACATATGCTC GCTCAGATCTTATCCATGCGCCTCGTGTTTTCAACCAAATTCGTTACCGC CTGCCTACTTCACCCCCCCCCCCCCCCCCCCTCGTGGAAAATGACTTCTC AGGTTGACGATGAGTTGGCCAAGGAATGCTCCGCCCCCGGCGGCGCGGGC GTCCTGGGGGCGTTGTCGCGCATCGTACGGAGGCACGGCAAGGCGGGGCT GTGGCGGGGGATGGTGCCCGTCTTGCTCACCATGGGCGTGTCCAACTTCG TTTATTTTTACTGCTTCAACGGCATGAAGGTGCAGCTTCAACGGCATTAA GGTACAACTCCGTGTATTTTTACTGCTTTAACGGCATGAAGGTACAGCTT CAACGGCATTAAGGTACAACTTCGTGTATTTTTACTGCTTCAACGGCATG AAGGTACGATGCTATATATATAGACGCCGATGCGGTGCGATGGATGTGCC ACCGCTCGCGCCCGCGCCGCCGCCGCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCGCCCCCCCCCGCCCCCCCGCCTCCGTCCGCGCGCCC CGNNNNNNNNNNATGGAGGTACGATTCTATATATATTGGCCCCCGTGGGG GGGGGTGGATGTGCCCCCCCCCCCCCCCCCGCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCTGTGCGCGATTTTGGTCGGGTGCTTTTGTTTCTCCGGT GTCACACGGCGTGTCGGCATGGCTCGCTCGTTCCCGCTTGGATTACGACG ATGTCCATCAAGAAAAACCACATGTTTGTACATTGTGTATGATGCACATA TGTATCTACCGTAGGTGACATAAGATACCACCCCCCCCCCTGGACACATT TTCAAAGCTCGATTCCTCCCCAGCAAGAAGAGTGCCAGTAGTGCCGAAAG GGGGGTGGTGGCGTTGGAAAGACCTATTCGAGGGCTGTCCGAAAATGTGT CGTTTGGTGCTGGCACCCTCTTCGTTACGGAGTATTGGAGCTCTCAAAAG TGGGTCCAGGGGGGGGTATCTTGTGTCACCTAATGTAGATCCTACCGAGG TGGCGCCGCAGGAAACAGTCGCTTGCCTGCCCCCCCCCCCCCCCTCCCCC CCCCGCCCCTCCTCCCCCCCCCCCCCCCACCCCNNNNNNNNNNGGCCCGG GGGGGGGGATCTTTTTGCCCCTCATGTTGGCCCTCCCGCGGGGGGGCCCC AGGAAACAGCCCCTTTCCTCCCCCCCCCCCCCCCCTATCTATGCCGTGTC ACTTCGACCAAAACCCGGCCATGCCCGAGACCGATCCCCTCCCCCTGCCC CCCCCGTGCAAACTCAACTCACATTCTTTCGGCGGTCGATCTGCGGCAAT CACGGCCACTCCGCGGGCTAGCAGGCGGCTTTACTCGCGAGGAGGCATCG CCTGCGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig10788:1047..5653+

>mRNA_L-elsbetiae_contig10788.731.1 ID=mRNA_L-elsbetiae_contig10788.731.1|Name=mRNA_L-elsbetiae_contig10788.731.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=708bp|location=Sequence derived from alignment at L-elsbetiae_contig10788:1047..5653+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGATCACTAGCACCAGCGCAACAGCCGCCCGTGGCCTCGTCTCCGCC
GCCGCCTCTTGCGCACGCCCTGTCCGGGGCTGTCGGTGCCGTGTGCGCGA
TGGCTCTGCTATACCCCCTAGATCAAGTACGAGCGATCCTACAGATGGGA
TCACTAGCACCAGCGCAACAGCCGCCCGTGGCCTCGTCTCCGCCGCCGCC
TCTTGCGCACGCCCTGTCCGGGGCTGTCGGTGCCGTGTGCGCGATGGCTC
TGCTATACCCCCTAGATCAAGTACGAGCGATCCTACAGGTTGACGATGAG
TTGGCCAAGGAATGCTCCGCCCCCGGCGGCGCGGGCGTCCTGGGGGCGTT
GTCGCGCATCGTACGGAGGCACGGCAAGGCGGGGCTGTGGCGGGGGATGG
TGCCCGTCTTGCTCACCATGGGCGTGTCCAACTTCGTTTATTTTTACTGC
TTCAACGGCATGAAGGTTGACGATGAGTTGGCCAAGGAATGCTCCGCCCC
CGGCGGCGCGGGCGTCCTGGGGGCGTTGTCGCGCATCGTACGGAGGCACG
GCAAGGCGGGGCTGTGGCGGGGGATGGTGCCCGTCTTGCTCACCATGGGC
GTGTCCAACTTCGTTTATTTTTACTGCTTCAACGGCATGAAGGCGGCTTT
ACTCGCGAGGAGGCATCGCCTGCGGGCGGCTTTACTCGCGAGGAGGCATC
GCCTGCGG
back to top