mRNA_L-elsbetiae_contig10786.730.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10786.730.1 vs. uniprot
Match: A0A6H5K608_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K608_9PHAE) HSP 1 Score: 213 bits (543), Expect = 6.300e-62 Identity = 109/115 (94.78%), Postives = 113/115 (98.26%), Query Frame = 1 Query: 1 LGVENLQGSGRIAGETSAAYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKAAAAPILLTGYQALNTLMGREVYTSNEQLGGAGVMGPNGISHQLVDSHIGAVASALRWLSYVPSS 345 LGVENLQGSGRIAGETS+AYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKA+A+PILLTGYQALNTLMGREVYTSNEQLGG GVMGPNGISHQ+VDSHIGAV SALRWLSYVPSS Sbjct: 1734 LGVENLQGSGRIAGETSSAYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKASASPILLTGYQALNTLMGREVYTSNEQLGGTGVMGPNGISHQVVDSHIGAVTSALRWLSYVPSS 1848
BLAST of mRNA_L-elsbetiae_contig10786.730.1 vs. uniprot
Match: A0A7S4MUC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MUC6_9STRA) HSP 1 Score: 172 bits (435), Expect = 3.710e-48 Identity = 86/114 (75.44%), Postives = 100/114 (87.72%), Query Frame = 1 Query: 1 LGVENLQGSGRIAGETSAAYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKAAAAPILLTGYQALNTLMGREVYTSNEQLGGAGVMGPNGISHQLVDSHIGAVASALRWLSYVPS 342 LGVENL+GSG IAGETS+AY+D+FTLT+VLGRTVGIGAYLVRLGQRTIQK A+PI+LTGYQALN LMG +VYT+N+QLGG G+M NG+SH H+GAVASA+ WLSYVPS Sbjct: 159 LGVENLKGSGLIAGETSSAYNDIFTLTVVLGRTVGIGAYLVRLGQRTIQKTTASPIILTGYQALNKLMGCDVYTTNDQLGGPGIMYSNGVSHISSPDHLGAVASAVDWLSYVPS 272
BLAST of mRNA_L-elsbetiae_contig10786.730.1 vs. uniprot
Match: A0A482STZ8_9ARCH (Acetyl-CoA carboxylase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STZ8_9ARCH) HSP 1 Score: 173 bits (438), Expect = 8.760e-48 Identity = 85/115 (73.91%), Postives = 99/115 (86.09%), Query Frame = 1 Query: 1 LGVENLQGSGRIAGETSAAYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKAAAAPILLTGYQALNTLMGREVYTSNEQLGGAGVMGPNGISHQLVDSHIGAVASALRWLSYVPSS 345 LGVENL GSG IAGET+ AY+++FTLTLV+GRTVGIGAYLVRLGQRTIQK API+LTGYQALN LMGRE+YT+N+QLGG +M PNG+SHQL D+H AV A+ WLS+VPSS Sbjct: 1671 LGVENLMGSGLIAGETARAYNEIFTLTLVVGRTVGIGAYLVRLGQRTIQKTRHAPIILTGYQALNKLMGREIYTTNDQLGGPMIMFPNGVSHQLADTHYDAVVKAVEWLSFVPSS 1785
BLAST of mRNA_L-elsbetiae_contig10786.730.1 vs. uniprot
Match: A0A835YMY6_9STRA (Acetyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMY6_9STRA) HSP 1 Score: 173 bits (438), Expect = 8.810e-48 Identity = 89/115 (77.39%), Postives = 101/115 (87.83%), Query Frame = 1 Query: 1 LGVENLQGSGRIAGETSAAYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKAAAAPILLTGYQALNTLMGREVYTSNEQLGGA-GVMGPNGISHQLVDSHIGAVASALRWLSYVPS 342 LGVENL+GSG IAGETSAAY+DVFTLTLV+GR+VGIGAYLVRLGQRTIQ AAPILLTGYQALNTLMGREVY SN+QLGG VM PNG++H L ++H+ +V ALRWLSYVP+ Sbjct: 1733 LGVENLRGSGAIAGETSAAYNDVFTLTLVVGRSVGIGAYLVRLGQRTIQNVTAAPILLTGYQALNTLMGREVYASNDQLGGGQSVMYPNGVAHLLAETHLESVRLALRWLSYVPA 1847
BLAST of mRNA_L-elsbetiae_contig10786.730.1 vs. uniprot
Match: A0A7S2V2G8_9STRA (Acetyl-CoA carboxylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G8_9STRA) HSP 1 Score: 172 bits (435), Expect = 2.240e-47 Identity = 86/115 (74.78%), Postives = 101/115 (87.83%), Query Frame = 1 Query: 1 LGVENLQGSGRIAGETSAAYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKAAAAPILLTGYQALNTLMGREVYTSNEQLGGAG-VMGPNGISHQLVDSHIGAVASALRWLSYVPS 342 LGVENL GSG IAGETS AY D+FTLTLV+GR+VGIGAYLVRLGQRTIQK +PI+LTGYQALN LMGRE+Y SN+QLGGAG VMGPNG++H +V++H+ V S+L+WLSYVPS Sbjct: 1794 LGVENLSGSGLIAGETSKAYEDIFTLTLVVGRSVGIGAYLVRLGQRTIQKETESPIILTGYQALNKLMGRELYQSNDQLGGAGAVMGPNGVTHVVVENHMEVVTSSLKWLSYVPS 1908
BLAST of mRNA_L-elsbetiae_contig10786.730.1 vs. uniprot
Match: A0A7S0C3E3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3E3_9STRA) HSP 1 Score: 165 bits (417), Expect = 5.110e-47 Identity = 79/114 (69.30%), Postives = 97/114 (85.09%), Query Frame = 1 Query: 1 LGVENLQGSGRIAGETSAAYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKAAAAPILLTGYQALNTLMGREVYTSNEQLGGAGVMGPNGISHQLVDSHIGAVASALRWLSYVPS 342 LGVENL+GSG IAGETS+AY D+FT+T+VLGRTVGIGAYLVRLGQRTIQK ++PI+LTGYQALN LMG EVY++N+QLGG G+M NG++H + H+ + AL+WLSYVPS Sbjct: 178 LGVENLKGSGLIAGETSSAYEDIFTMTIVLGRTVGIGAYLVRLGQRTIQKKTSSPIILTGYQALNKLMGCEVYSTNDQLGGPGIMYNNGVTHLVAPDHLSCITEALQWLSYVPS 291
BLAST of mRNA_L-elsbetiae_contig10786.730.1 vs. uniprot
Match: K0R0D3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R0D3_THAOC) HSP 1 Score: 167 bits (424), Expect = 1.400e-46 Identity = 82/114 (71.93%), Postives = 99/114 (86.84%), Query Frame = 1 Query: 1 LGVENLQGSGRIAGETSAAYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKAAAAPILLTGYQALNTLMGREVYTSNEQLGGAGVMGPNGISHQLVDSHIGAVASALRWLSYVPS 342 LGVENL+GSG IAGETS+AY D+FTLT+VLGRTVGIGAYLVRLGQRTIQK +++PI+LTGYQALN LMG +VY++N+QLGG +M NGISH V+ H+ AV SA+ WLSYVP+ Sbjct: 93 LGVENLKGSGLIAGETSSAYDDIFTLTIVLGRTVGIGAYLVRLGQRTIQKVSSSPIILTGYQALNKLMGVDVYSTNDQLGGPAIMYSNGISHLAVNDHLSAVTSAIHWLSYVPA 206
BLAST of mRNA_L-elsbetiae_contig10786.730.1 vs. uniprot
Match: A0A7S3LZP0_9STRA (Acetyl-CoA carboxylase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZP0_9STRA) HSP 1 Score: 169 bits (428), Expect = 1.960e-46 Identity = 82/114 (71.93%), Postives = 98/114 (85.96%), Query Frame = 1 Query: 1 LGVENLQGSGRIAGETSAAYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKAAAAPILLTGYQALNTLMGREVYTSNEQLGGAGVMGPNGISHQLVDSHIGAVASALRWLSYVPS 342 LGVENL GSG IAGET+ AY+++FTLTLV+GRTVGIGAYLVRLGQRTIQK API+LTGYQALN LMGRE+YT+N+QLGG +M PNG+SHQL ++H +V AL WLS+VP+ Sbjct: 1763 LGVENLMGSGLIAGETARAYNEIFTLTLVVGRTVGIGAYLVRLGQRTIQKTRNAPIILTGYQALNKLMGREIYTTNDQLGGPMIMFPNGVSHQLAETHFDSVVKALEWLSFVPA 1876
BLAST of mRNA_L-elsbetiae_contig10786.730.1 vs. uniprot
Match: A0A7S1BIY5_9STRA (Acetyl-CoA carboxylase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIY5_9STRA) HSP 1 Score: 169 bits (427), Expect = 2.670e-46 Identity = 81/114 (71.05%), Postives = 100/114 (87.72%), Query Frame = 1 Query: 1 LGVENLQGSGRIAGETSAAYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKAAAAPILLTGYQALNTLMGREVYTSNEQLGGAGVMGPNGISHQLVDSHIGAVASALRWLSYVPS 342 LGVENL+GSG IAGETSAAY+D+FT+T+VLGRTVGIGAYLVRLGQRTIQK A+PI+LTGYQALN LMG +VYT+N+QLGG G+M NG+SH + +H+ A++ AL W++YVPS Sbjct: 1599 LGVENLKGSGLIAGETSAAYNDIFTMTIVLGRTVGIGAYLVRLGQRTIQKTTASPIILTGYQALNKLMGCDVYTTNDQLGGPGIMFNNGVSHLVATNHLEAISQALNWIAYVPS 1712
BLAST of mRNA_L-elsbetiae_contig10786.730.1 vs. uniprot
Match: A0A7S1Y847_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y847_9STRA) HSP 1 Score: 168 bits (425), Expect = 3.270e-46 Identity = 82/115 (71.30%), Postives = 98/115 (85.22%), Query Frame = 1 Query: 1 LGVENLQGSGRIAGETSAAYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKAAAAPILLTGYQALNTLMGREVYTSNEQLGGAGVMGPNGISHQLVDSHIGAVASALRWLSYVPSS 345 LGVENL+GSG IAGETSAAY ++FTLT+VLGRTVGIGAYLVRLGQRTIQK A+PI+LTGYQALN LMG +VY++N+QLGG G+M PNG+SH H+ AV A+ WLSYVP++ Sbjct: 263 LGVENLKGSGLIAGETSAAYDEIFTLTIVLGRTVGIGAYLVRLGQRTIQKTTASPIILTGYQALNKLMGVDVYSTNDQLGGPGIMYPNGVSHMTAKDHLKAVKQAVDWLSYVPAN 377 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10786.730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10786.730.1 >prot_L-elsbetiae_contig10786.730.1 ID=prot_L-elsbetiae_contig10786.730.1|Name=mRNA_L-elsbetiae_contig10786.730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=115bp LGVENLQGSGRIAGETSAAYSDVFTLTLVLGRTVGIGAYLVRLGQRTIQKback to top mRNA from alignment at L-elsbetiae_contig10786:918..2015- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10786.730.1 ID=mRNA_L-elsbetiae_contig10786.730.1|Name=mRNA_L-elsbetiae_contig10786.730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1098bp|location=Sequence derived from alignment at L-elsbetiae_contig10786:918..2015- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10786:918..2015- >mRNA_L-elsbetiae_contig10786.730.1 ID=mRNA_L-elsbetiae_contig10786.730.1|Name=mRNA_L-elsbetiae_contig10786.730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=690bp|location=Sequence derived from alignment at L-elsbetiae_contig10786:918..2015- (Laminarionema elsbetiae ELsaHSoW15)back to top |