mRNA_L-elsbetiae_contig10784.727.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10784.727.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI) HSP 1 Score: 139 bits (351), Expect = 3.480e-36 Identity = 70/110 (63.64%), Postives = 84/110 (76.36%), Query Frame = 1 Query: 190 MHIFPKRAPLQELGGEILKLVSYSATPKQWAEWLRVPLEHAAARGNLGLVDALLEAGADGSAGWRGCRRRSLLDAAXXXXXXXXXXXXXXXXAQPDVNVVSLSPRRSALY 519 MH++P+R Q +G EI KLVS+SATP+QW EWLRVPLEHAAARGNL LV++LLEAGADGSAGW+GCR R+L+DAA AQPDVNVVS+S +RS+LY Sbjct: 1 MHVYPERRLFQGMGSEIWKLVSHSATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVVSVSSKRSSLY 110
BLAST of mRNA_L-elsbetiae_contig10784.727.1 vs. uniprot
Match: D8LRS0_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI) HSP 1 Score: 136 bits (342), Expect = 6.880e-35 Identity = 70/110 (63.64%), Postives = 81/110 (73.64%), Query Frame = 1 Query: 190 MHIFPKRAPLQELGGEILKLVSYSATPKQWAEWLRVPLEHAAARGNLGLVDALLEAGADGSAGWRGCRRRSLLDAAXXXXXXXXXXXXXXXXAQPDVNVVSLSPRRSALY 519 M+++PKR LQ + EI KLVSY ATP+QW EWLRVPLEHAAARGNL LV++LLEAGADGSAGWRGC R+L+DAA AQPDVN VS+S +RSALY Sbjct: 1 MYVYPKRRLLQGMESEIWKLVSYGATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWRGCLDRTLIDAAALGGSEPVVSALLRAGAQPDVNTVSISSKRSALY 110
BLAST of mRNA_L-elsbetiae_contig10784.727.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI) HSP 1 Score: 134 bits (336), Expect = 7.060e-34 Identity = 70/110 (63.64%), Postives = 81/110 (73.64%), Query Frame = 1 Query: 190 MHIFPKRAPLQELGGEILKLVSYSATPKQWAEWLRVPLEHAAARGNLGLVDALLEAGADGSAGWRGCRRRSLLDAAXXXXXXXXXXXXXXXXAQPDVNVVSLSPRRSALY 519 MH++P+R LQ + EI KLVSYSATP+QW EWLR+PLEHAAARGNL LV +LL AGADGSAGWRGCR R+L+DAA AQ DVNVVS+S +RSALY Sbjct: 1 MHVYPERRLLQGMESEIWKLVSYSATPQQWKEWLRMPLEHAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALGGSEPVVSTLLRAGAQWDVNVVSVSSKRSALY 110
BLAST of mRNA_L-elsbetiae_contig10784.727.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI) HSP 1 Score: 131 bits (329), Expect = 4.640e-33 Identity = 80/111 (72.07%), Postives = 95/111 (85.59%), Query Frame = 1 Query: 190 MHIFPKRAPLQELGGEILKLVSYSATPKQWAEWLRVPLEHAAARGNLGLVDALLEAGADGSAGWRGCRRRSLLDAAXXXXXXXXXXXXXXXXAQPDVNVVSLSPRRSALYV 522 MH++PKRA L+ EI KL+S+ ATP+QWA+WLR PLEHAAARGN+GLV+ LLEAGADG AGWRGCR R++LDAAXXXXXXXXXXXXXX PDVNVVS+S +RSAL++ Sbjct: 1 MHLYPKRALLEGAEVEIFKLLSFCATPEQWADWLRAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPDVNVVSVSSKRSALHL 111
BLAST of mRNA_L-elsbetiae_contig10784.727.1 vs. uniprot
Match: A0A6H5JY41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY41_9PHAE) HSP 1 Score: 129 bits (324), Expect = 5.100e-32 Identity = 66/111 (59.46%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 190 MHIFPKRAPLQELGGEILKLVSYSATPKQWAEWLRVPLEHAAARGNLGLVDALLEAGADGSAGWRGCRRRSLLDAAXXXXXXXXXXXXXXXXAQPDVNVVSLSPRRSALYV 522 MH+ PKRA L+E EI KL+S+ ATP++WAEWLR P EHAAARGN+GLV+ LLEAGADG AGWRGCR R++LDAA PDVNVVS+S +RSAL++ Sbjct: 1 MHLDPKRALLEEAELEIFKLLSFGATPERWAEWLRAPQEHAAARGNIGLVERLLEAGADGGAGWRGCRSRTMLDAAALGGNADVVTKLLRSECVPDVNVVSVSSKRSALHL 111
BLAST of mRNA_L-elsbetiae_contig10784.727.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE) HSP 1 Score: 124 bits (311), Expect = 2.060e-31 Identity = 65/110 (59.09%), Postives = 76/110 (69.09%), Query Frame = 1 Query: 190 MHIFPKRAPLQELGGEILKLVSYSATPKQWAEWLRVPLEHAAARGNLGLVDALLEAGADGSAGWRGCRRRSLLDAAXXXXXXXXXXXXXXXXAQPDVNVVSLSPRRSALY 519 MHIFP+R L LG E+ KLVSY A+ +QWAEWLRVPLEHAA+RGN LV+ LL+AGAD AGWRGCR R+LLDAA A DVN V++S RRSAL+ Sbjct: 1 MHIFPERTSLDGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSSRRSALH 110
BLAST of mRNA_L-elsbetiae_contig10784.727.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 127 bits (320), Expect = 2.600e-31 Identity = 67/111 (60.36%), Postives = 78/111 (70.27%), Query Frame = 1 Query: 190 MHIFPKRAPLQELGGEILKLVSYSATPKQWAEWLRVPLEHAAARGNLGLVDALLEAGADGSAGWRGCRRRSLLDAAXXXXXXXXXXXXXXXXAQPDVNVVSLSPRRSALYV 522 MH++PKRA L+ EI KL+ + ATP+QWAEWLR PLEHAAARGNLGLV+ LL AGA+G AGWRGCR R++LDAA DVNVVSLS RRSAL+V Sbjct: 1 MHLYPKRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHV 111
BLAST of mRNA_L-elsbetiae_contig10784.727.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI) HSP 1 Score: 123 bits (308), Expect = 7.860e-30 Identity = 81/110 (73.64%), Postives = 91/110 (82.73%), Query Frame = 1 Query: 190 MHIFPKRAPLQELGGEILKLVSYSATPKQWAEWLRVPLEHAAARGNLGLVDALLEAGADGSAGWRGCRRRSLLDAAXXXXXXXXXXXXXXXXAQPDVNVVSLSPRRSALY 519 MHIFP+R L LG E+ KLVSY A+ +QWAEWLRV LEHAA+RGNL LV+ LL AGAD +GWRGCR R+LLDAAXXXXXXXXXXXXXXXXA DVN V++S RRSALY Sbjct: 1 MHIFPERTSLDGLGSELFKLVSYGASREQWAEWLRVALEHAASRGNLSLVERLLRAGADAGSGWRGCRCRTLLDAAXXXXXXXXXXXXXXXXAGADVNKVTVSSRRSALY 110
BLAST of mRNA_L-elsbetiae_contig10784.727.1 vs. uniprot
Match: A0A6H5JW91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW91_9PHAE) HSP 1 Score: 115 bits (288), Expect = 4.110e-29 Identity = 65/108 (60.19%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 193 HIFPKRAPLQELGGEILKLVSYSATPKQWAEWLRVPLEHAAARGNLGLVDALLEAGADGSAGWRGCRRRSLLDAAXXXXXXXXXXXXXXXXAQPDVNVVSLSPRRSAL 516 HI+PKR L+ L EI KLVSYSATP+QW EWL+VPLE AAA GN L LLEAGA GSAGWRGCR RSL+DAA A+PDV VVS S + SAL Sbjct: 45 HIYPKRVLLEGLEIEIFKLVSYSATPEQWKEWLQVPLERAAALGNRDLFYKLLEAGAYGSAGWRGCRDRSLIDAAAVGGNVDVVSGFLEAGAEPDVQVVSWSSKTSAL 152
BLAST of mRNA_L-elsbetiae_contig10784.727.1 vs. uniprot
Match: A0A6H5JRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY1_9PHAE) HSP 1 Score: 113 bits (282), Expect = 2.160e-26 Identity = 62/110 (56.36%), Postives = 74/110 (67.27%), Query Frame = 1 Query: 190 MHIFPKRAPLQELGGEILKLVSYSATPKQWAEWLRVPLEHAAARGNLGLVDALLEAGADGSAGWRGCRRRSLLDAAXXXXXXXXXXXXXXXXAQPDVNVVSLSPRRSALY 519 M ++P+R LQ + EI KLVSYSATP+QW EWLRVPL+HAAARGNL LV++LLEAGADGSAGW+G AQPDVNV+S+S +RSALY Sbjct: 1 MRVYPERVLLQGMESEIWKLVSYSATPQQWKEWLRVPLKHAAARGNLNLVNSLLEAGADGSAGWKG--------------------------AQPDVNVLSVSSKRSALY 84 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10784.727.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10784.727.1 >prot_L-elsbetiae_contig10784.727.1 ID=prot_L-elsbetiae_contig10784.727.1|Name=mRNA_L-elsbetiae_contig10784.727.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=174bp STNYKSCEERARLALLPCTSLELSGRPGQPWGACSFSDIGLGLTTLLSNDback to top mRNA from alignment at L-elsbetiae_contig10784:2615..3580- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10784.727.1 ID=mRNA_L-elsbetiae_contig10784.727.1|Name=mRNA_L-elsbetiae_contig10784.727.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=966bp|location=Sequence derived from alignment at L-elsbetiae_contig10784:2615..3580- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10784:2615..3580- >mRNA_L-elsbetiae_contig10784.727.1 ID=mRNA_L-elsbetiae_contig10784.727.1|Name=mRNA_L-elsbetiae_contig10784.727.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1044bp|location=Sequence derived from alignment at L-elsbetiae_contig10784:2615..3580- (Laminarionema elsbetiae ELsaHSoW15)back to top |