mRNA_L-elsbetiae_contig10772.721.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10772.721.1
Unique NamemRNA_L-elsbetiae_contig10772.721.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10772.721.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10772contigL-elsbetiae_contig10772:778..4625 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1355
Cds size1353
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815296.3870656-CDS-L-elsbetiae_contig10772:777..13031622815296.3870656-CDS-L-elsbetiae_contig10772:777..1303Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10772 778..1303 +
1691682822.9760365-CDS-L-elsbetiae_contig10772:777..13031691682822.9760365-CDS-L-elsbetiae_contig10772:777..1303Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10772 778..1303 +
1622815296.4595609-CDS-L-elsbetiae_contig10772:3798..46251622815296.4595609-CDS-L-elsbetiae_contig10772:3798..4625Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10772 3799..4625 +
1691682822.9847422-CDS-L-elsbetiae_contig10772:3798..46251691682822.9847422-CDS-L-elsbetiae_contig10772:3798..4625Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10772 3799..4625 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10772.721.1prot_L-elsbetiae_contig10772.721.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10772 778..4625 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10772.721.1

>prot_L-elsbetiae_contig10772.721.1 ID=prot_L-elsbetiae_contig10772.721.1|Name=mRNA_L-elsbetiae_contig10772.721.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=451bp
PAQRTRATQGFGETHQCVNMLVDGEPPPPPPRGPGAEAPCPPNRAGLLPT
PPSRGAASMPPAGSQLLAGPSGAPPRGPPLLPTPPLAGSTEEAQKCFGTA
GSNLSGAPPPPPRAGGEGSAPPPPPRMLVLPAGDDAPSGAGAGAGDGGGG
GGGVPPPPPPRKMSPGASAGGSAPAGGNPGRDSASTSPRQQQQQQQPLQH
PRGPPGPPGPPGPPGPPPERPSMGPGSIPPPNRDARGPPGPPPGVQPGRG
MPMPMPMPPFAGPPRPMMMGGRGPMGGRGGPPPPPRPDGNSVGPGGGPGG
HMGGRGPRNEGNSLGPGRGPGENMGGRGPRNEENNLGAGGGPGGHMGACG
PRNEGHSLGPVRGPGENMGARGPRNEGNSLGPGGGPGGHMGGRGPRNEEN
NFGPGGGPGGNMGARGPRNEGNSVGPGGGPGGHMGGRGPRNEENNLGPGG
G
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mRNA from alignment at L-elsbetiae_contig10772:778..4625+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10772.721.1 ID=mRNA_L-elsbetiae_contig10772.721.1|Name=mRNA_L-elsbetiae_contig10772.721.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3848bp|location=Sequence derived from alignment at L-elsbetiae_contig10772:778..4625+ (Laminarionema elsbetiae ELsaHSoW15)
CCGGCGCAGCGGACGAGAGCGACACAGGGGTTTGGAGAAACACACCAGTG
TGTAAATATGCTGGTCGATGGAGAGCCACCTCCCCCCCCGCCCCGCGGCC
CTGGCGCCGAGGCCCCCTGTCCGCCGAATAGAGCTGGATTGCTCCCTACC
CCTCCTTCCCGCGGCGCAGCTTCGATGCCGCCGGCCGGCTCACAGCTGCT
AGCGGGGCCTTCTGGCGCACCTCCCCGAGGACCTCCCCTTCTGCCCACAC
CACCGCTCGCGGGCAGCACGGAAGAAGCGCAAAAGTGTTTTGGCACGGCA
GGTTCGAATCTGTCCGGTGCGCCGCCTCCGCCGCCCCGAGCAGGAGGCGA
AGGATCGGCACCTCCGCCGCCCCCGCGGATGCTTGTGCTACCGGCGGGTG
ACGACGCACCCAGCGGTGCCGGTGCCGGTGCCGGTGATGGTGGTGGTGGT
GGTGGTGGTGTGCCCCCTCCTCCGCCTCCTAGGAAGATGTCGCCTGGAGC
TTCGGCGGGTGGATCTGCACCAGCAGGTGAAAAAGCTCTTGTGGCAACTC
GGTAACTCGGTGACTACTACTGTACCTACGTTAGATTTGTGTAATTAGTA
GACTACTCTGTGTACCATGTGCAGCAGGTGAATGTACCCTACCAGGTGTA
CCATACTACTTGGACCGTCGCATACGTACTTACTCTGTTGGAGCGTTACG
TTCTCTTGGTATCGAGCATGTGCGACAAAAAATAGTTGCTACGAAGTATT
TTACTTGTACTTGCTTTCTTTTGCGTATATATGTAAAATGGGCAGTGGGG
TGTGAGGACTTTGTGCCGCTCCTCCATGCTCTCATGCACCATGTACAACG
TAAATGCCGCGTTTGGAAAGCCCCCTACATTATTGTTAAACTGATGATTC
CAAGATCGCTACCATGTACATCTTATTGTAAGCGATTCCAAGGGTATCGT
AGAGTGTGATTGGAATAGGACACGGATGTATGAGTGGAAAAGGGGTTCAT
GTATAGTCTTTGTATGAGTTGGAGGATGTTTTATGTACATGTTCCCTGGG
ATATTGTATCGCAGTCTTCATCTAATTTGAGTGAAAACTGAGTACGTGTG
TGTGTACACCATCTTCAGCTCTTGTGGTTGGACACATCATCAGCCCGAGA
GAACGAGAACAATCCAGCACGAATGCACAAAAAATAGTGAACACATGGTC
TTAATAAAGTAAACGAATACGGTAATGTCACTTGAAATACATGGAACAGC
GGAAGCTGAAGCTGACAATATGAAAGGAAGAGCATGCCACGAAAGGGCAC
ACACAAACGCCGGCACACATGAAAGGCGCTGGCTATGACGCAACGCTTGC
AAAAAAATGCATTATCCTGCCTTTGAAAGCATGGCGGCACTCTTCTGTGC
TCTCTCTTGCTTCCCTCTACAAAAGTCTGTATCCTATGTTTTTTTTTCCT
TTTTTCCGCTCATCATTGGCATATTTGTCGTCTGCCCCACTGGCCCCCAT
CGTCCACTGCGACTAGCTAGACGACCCCACCGGGGTCACACAGGAGGAGG
GGTTGGACCCCATCCTACGGTGCCTGCCTTAATTGTTTTTATCGCGAGCA
GGGTTCAGCACTCCCCACCCTCGTCAACAATGAAGTCGAAGTATTATTTA
CCAACGAAATCGCTTTCAATTTTCCAGAATCGAATGTGAGAAAAAAACTC
ACTTCGCAGGGGCTCGAAGCCAGGACCTGGTTCTTAGAAGGTTGCGGGGG
TACCAACTAGACCACCGGGGCGACCGGATGATGTATGACCAGAGGATGAA
AGGATGAAATCATTCCAGGCGGAAAGACAACCCTCTCAGAAATGCACCGA
CGCAGTGCGGATACTTTTCCAACCGAAACCGGATTCATTTCCTCCTATCG
GACGAATGGTATCGTAAGGGTGTATGTACCCTATGGTAAGAGAGGATGCA
TAACATGCAACATCGATAGAAGAAGCAAGCTCACAAAGAGCAGGCGGTCG
CTTTCCGAGAGGCTGAAATAATCCCGAAAGGTTTAGGTACGACAAATGCA
ACACGCAGCATCGAGAGGAGAAACGATCTGACAAAGAGAGATGGGTTTAA
ACCTCAGGTACTGTAGATAGCGGGCAGCGCGAGCAGCAATGCATAGCCAC
ACGCGAGGGACACCTCGGGGGGGGAAGGGAGAGAGAGAGAGACTCCGGAT
GAAGGAAGCAGACCGCAGTATTCAGAATTCCGGGCGGGCGGAAATAGAGC
CAGCGCAGTCTACATGTACAAATCAGCGGGGTGGGCGTGTACAGTACTGC
TGTAGCACTCAGGCTTGAGAGGGCCGATGACGGGGGAAGTTTTTCGGTTG
TCTTTTTCCGTTTGTCGGCTCGGTTTCTAGTGCACAGCTTGGCCTGCACA
CGCAGCAGAGGCGCAGCTTCGCGTCACCCACTCTGCATGCCATGCATGGA
AGAGGAAAAGCGTTGCACTTCGTGCCTACATACGATGGTGCCTGCCGTGG
TACGTGAGCAACCTCGGTTTGAATTCGCGAACGAGGCAAAGAGGGTCGCT
GTCGATATCGAGGTCACCTCCACACTTTACACAAATCGCGAAGCCGCCTC
TCCCCTGTCCCTGTGCACCGCTGCAAGCTGTTGCGTAATTTCACAACTAA
TTATGTACATTTGCATGTAGGTACATGTACAACCAGGGTTTACAACGTTT
TTGTTTGAGCGGCACATCAATGGACATACAATGTAATATGCATGTCCGAA
ACGTCTCAGCGTGTCCGAAATGTCTCAAGACGAGCGCGCGCTACATATCA
AAGGAGCACAAGCAGATGTCACAAACTCCCCTCGTAGCGCATCAGACTAA
TCACGTTCATCATGCAGACCATGTACATACATTCAACACTTGGCATTTTC
GTTACCCCTCGAAAAACATCGCCTCTCTCAAGCGCCTCTAATCCACGCAC
CCCACCCCCAATACCCCACAATAACTTGTTCTCCCGGCGGCCGCTCTTCT
CGTCAAAATCTCGTCAAAAAGGGGGGAATCCCGGACGAGATTCCGCGAGT
ACCTCCCCCAGGCAGCAACAGCAGCAGCAGCAGCCGCTGCAGCACCCTCG
CGGGCCTCCTGGCCCTCCCGGCCCCCCCGGCCCTCCCGGTCCCCCCCCGG
AGCGGCCGTCGATGGGGCCAGGCAGCATACCGCCGCCTAACCGGGACGCG
CGAGGGCCCCCGGGACCGCCGCCGGGAGTTCAACCCGGAAGAGGCATGCC
CATGCCTATGCCTATGCCTCCGTTCGCGGGCCCCCCTCGCCCGATGATGA
TGGGAGGAAGAGGGCCGATGGGAGGAAGAGGAGGACCGCCGCCGCCGCCG
CGGCCTGATGGAAACAGCGTGGGTCCGGGCGGGGGCCCGGGCGGGCACAT
GGGAGGTCGCGGGCCGCGGAATGAAGGAAACAGCTTGGGTCCGGGTCGGG
GCCCGGGCGAAAACATGGGAGGTCGCGGTCCGCGAAATGAAGAAAACAAC
TTGGGCGCGGGCGGGGGCCCGGGCGGGCACATGGGAGCGTGCGGGCCGCG
GAATGAAGGACACAGCTTGGGTCCGGTTCGGGGCCCGGGCGAGAACATGG
GAGCGCGCGGTCCGCGGAATGAAGGAAACAGCTTGGGTCCGGGCGGGGGC
CCGGGCGGACACATGGGAGGTCGCGGGCCGCGGAATGAAGAAAACAACTT
CGGTCCGGGCGGGGGCCCGGGCGGAAACATGGGAGCGCGCGGGCCGCGGA
ATGAAGGAAACAGCGTGGGTCCGGGCGGGGGCCCGGGCGGACACATGGGA
GGTCGCGGGCCGCGGAATGAAGAAAACAACTTGGGTCCGGGCGGGGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10772:778..4625+

>mRNA_L-elsbetiae_contig10772.721.1 ID=mRNA_L-elsbetiae_contig10772.721.1|Name=mRNA_L-elsbetiae_contig10772.721.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2706bp|location=Sequence derived from alignment at L-elsbetiae_contig10772:778..4625+ (Laminarionema elsbetiae ELsaHSoW15)
CCGGCGCAGCGGACGAGAGCGACACAGGGGTTTGGAGAAACACACCAGTG
TGTAAATATGCTGGTCGATGGAGAGCCACCTCCCCCCCCGCCCCGCGGCC
CTGGCGCCGAGGCCCCCTGTCCGCCGAATAGAGCTGGATTGCTCCCTACC
CCTCCTTCCCGCGGCGCAGCTTCGATGCCGCCGGCCGGCTCACAGCTGCT
AGCGGGGCCTTCTGGCGCACCTCCCCGAGGACCTCCCCTTCTGCCCACAC
CACCGCTCGCGGGCAGCACGGAAGAAGCGCAAAAGTGTTTTGGCACGGCA
GGTTCGAATCTGTCCGGTGCGCCGCCTCCGCCGCCCCGAGCAGGAGGCGA
AGGATCGGCACCTCCGCCGCCCCCGCGGATGCTTGTGCTACCGGCGGGTG
ACGACGCACCCAGCGGTGCCGGTGCCGGTGCCGGTGATGGTGGTGGTGGT
GGTGGTGGTGTGCCCCCTCCTCCGCCTCCTAGGAAGATGTCGCCTGGAGC
TTCGGCGGGTGGATCTGCACCAGCAGCCGGCGCAGCGGACGAGAGCGACA
CAGGGGTTTGGAGAAACACACCAGTGTGTAAATATGCTGGTCGATGGAGA
GCCACCTCCCCCCCCGCCCCGCGGCCCTGGCGCCGAGGCCCCCTGTCCGC
CGAATAGAGCTGGATTGCTCCCTACCCCTCCTTCCCGCGGCGCAGCTTCG
ATGCCGCCGGCCGGCTCACAGCTGCTAGCGGGGCCTTCTGGCGCACCTCC
CCGAGGACCTCCCCTTCTGCCCACACCACCGCTCGCGGGCAGCACGGAAG
AAGCGCAAAAGTGTTTTGGCACGGCAGGTTCGAATCTGTCCGGTGCGCCG
CCTCCGCCGCCCCGAGCAGGAGGCGAAGGATCGGCACCTCCGCCGCCCCC
GCGGATGCTTGTGCTACCGGCGGGTGACGACGCACCCAGCGGTGCCGGTG
CCGGTGCCGGTGATGGTGGTGGTGGTGGTGGTGGTGTGCCCCCTCCTCCG
CCTCCTAGGAAGATGTCGCCTGGAGCTTCGGCGGGTGGATCTGCACCAGC
AGGGGGGAATCCCGGACGAGATTCCGCGAGTACCTCCCCCAGGCAGCAAC
AGCAGCAGCAGCAGCCGCTGCAGCACCCTCGCGGGCCTCCTGGCCCTCCC
GGCCCCCCCGGCCCTCCCGGTCCCCCCCCGGAGCGGCCGTCGATGGGGCC
AGGCAGCATACCGCCGCCTAACCGGGACGCGCGAGGGCCCCCGGGACCGC
CGCCGGGAGTTCAACCCGGAAGAGGCATGCCCATGCCTATGCCTATGCCT
CCGTTCGCGGGCCCCCCTCGCCCGATGATGATGGGAGGAAGAGGGCCGAT
GGGAGGAAGAGGAGGACCGCCGCCGCCGCCGCGGCCTGATGGAAACAGCG
TGGGTCCGGGCGGGGGCCCGGGCGGGCACATGGGAGGTCGCGGGCCGCGG
AATGAAGGAAACAGCTTGGGTCCGGGTCGGGGCCCGGGCGAAAACATGGG
AGGTCGCGGTCCGCGAAATGAAGAAAACAACTTGGGCGCGGGCGGGGGCC
CGGGCGGGCACATGGGAGCGTGCGGGCCGCGGAATGAAGGACACAGCTTG
GGTCCGGTTCGGGGCCCGGGCGAGAACATGGGAGCGCGCGGTCCGCGGAA
TGAAGGAAACAGCTTGGGTCCGGGCGGGGGCCCGGGCGGACACATGGGAG
GTCGCGGGCCGCGGAATGAAGAAAACAACTTCGGTCCGGGCGGGGGCCCG
GGCGGAAACATGGGAGCGCGCGGGCCGCGGAATGAAGGAAACAGCGTGGG
TCCGGGCGGGGGCCCGGGCGGACACATGGGAGGTCGCGGGCCGCGGAATG
AAGAAAACAACTTGGGTCCGGGCGGGGGCGGGGGAATCCCGGACGAGATT
CCGCGAGTACCTCCCCCAGGCAGCAACAGCAGCAGCAGCAGCCGCTGCAG
CACCCTCGCGGGCCTCCTGGCCCTCCCGGCCCCCCCGGCCCTCCCGGTCC
CCCCCCGGAGCGGCCGTCGATGGGGCCAGGCAGCATACCGCCGCCTAACC
GGGACGCGCGAGGGCCCCCGGGACCGCCGCCGGGAGTTCAACCCGGAAGA
GGCATGCCCATGCCTATGCCTATGCCTCCGTTCGCGGGCCCCCCTCGCCC
GATGATGATGGGAGGAAGAGGGCCGATGGGAGGAAGAGGAGGACCGCCGC
CGCCGCCGCGGCCTGATGGAAACAGCGTGGGTCCGGGCGGGGGCCCGGGC
GGGCACATGGGAGGTCGCGGGCCGCGGAATGAAGGAAACAGCTTGGGTCC
GGGTCGGGGCCCGGGCGAAAACATGGGAGGTCGCGGTCCGCGAAATGAAG
AAAACAACTTGGGCGCGGGCGGGGGCCCGGGCGGGCACATGGGAGCGTGC
GGGCCGCGGAATGAAGGACACAGCTTGGGTCCGGTTCGGGGCCCGGGCGA
GAACATGGGAGCGCGCGGTCCGCGGAATGAAGGAAACAGCTTGGGTCCGG
GCGGGGGCCCGGGCGGACACATGGGAGGTCGCGGGCCGCGGAATGAAGAA
AACAACTTCGGTCCGGGCGGGGGCCCGGGCGGAAACATGGGAGCGCGCGG
GCCGCGGAATGAAGGAAACAGCGTGGGTCCGGGCGGGGGCCCGGGCGGAC
ACATGGGAGGTCGCGGGCCGCGGAATGAAGAAAACAACTTGGGTCCGGGC
GGGGGC
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