mRNA_L-elsbetiae_contig10767.710.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10767.710.1 vs. uniprot
Match: D7G218_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G218_ECTSI) HSP 1 Score: 112 bits (279), Expect = 2.250e-24 Identity = 54/96 (56.25%), Postives = 65/96 (67.71%), Query Frame = 3 Query: 891 HGRKTDIRTFDGPVDIDEASSIVAEGAPAFGWFAFPEKNKHLEEAFGAP--SWTLLDAYTPTVLRPDMHA---DGLQCCCPGPLDRWIALLYNVLL 1163 HG D R F GPVD+D A +VA+G P + W F ++NK LEEAF A WTLLDAY+PT+LR D HA DGL C PGP+D W+ LLYN+LL Sbjct: 135 HGESFD-RMFGGPVDLDTALDLVAKGPPMYKWTTFGDRNKLLEEAFEATHGGWTLLDAYSPTILRADFHASEEDGLHYCLPGPIDHWVVLLYNILL 229
BLAST of mRNA_L-elsbetiae_contig10767.710.1 vs. uniprot
Match: A0A6H5J7J3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J3_9PHAE) HSP 1 Score: 112 bits (279), Expect = 8.420e-23 Identity = 54/96 (56.25%), Postives = 66/96 (68.75%), Query Frame = 3 Query: 891 HGRKTDIRTFDGPVDIDEASSIVAEGAPAFGWFAFPEKNKHLEEAFGAPS--WTLLDAYTPTVLRPDMHA---DGLQCCCPGPLDRWIALLYNVLL 1163 HG D R F GPVD+D A +VA+G P + W F ++NK LEEAF A + WTLLDAY+PT+LR D HA DGL C PGP+D W+ LLYN+LL Sbjct: 353 HGESFD-RMFGGPVDLDTALDLVAKGPPRYKWTTFGDRNKLLEEAFEATNGGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILL 447
BLAST of mRNA_L-elsbetiae_contig10767.710.1 vs. uniprot
Match: A0A6H5K9U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U7_9PHAE) HSP 1 Score: 102 bits (255), Expect = 2.880e-22 Identity = 51/102 (50.00%), Postives = 60/102 (58.82%), Query Frame = 3 Query: 891 HGRKTDIRTFDGPVDIDEASSIVAEGAPAFGWFAFPEKNKHLEEAF---GAPSWTLLDAYTPTVLRPDMHADG------LQCCCPGPLDRWIALLYNVLLVE 1169 HG RTFDGPVD+D A +VA G + W FPE N LEEAF W LDAYTPT+LRPD H G L C PGP+D W+ LLY++LL + Sbjct: 31 HGVTCTERTFDGPVDVDTAIDLVASGPHQYQWGRFPEYNAILEEAFLGNATDGWKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYSMLLAK 132
BLAST of mRNA_L-elsbetiae_contig10767.710.1 vs. uniprot
Match: A0A6H5JU41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU41_9PHAE) HSP 1 Score: 107 bits (266), Expect = 2.800e-21 Identity = 50/89 (56.18%), Postives = 61/89 (68.54%), Query Frame = 3 Query: 912 RTFDGPVDIDEASSIVAEGAPAFGWFAFPEKNKHLEEAFGAP--SWTLLDAYTPTVLRPDMHA---DGLQCCCPGPLDRWIALLYNVLL 1163 + F GPVD+D A +V +G P + W F +KNK LEEAF A SWTLLDAY+PT+LR D H DGL C PGP+D W+ LLYN+LL Sbjct: 324 KMFSGPVDVDTALDLVEKGRPGYLWSTFGDKNKLLEEAFVAAHGSWTLLDAYSPTILRADSHPSANDGLHYCVPGPIDNWVVLLYNILL 412
BLAST of mRNA_L-elsbetiae_contig10767.710.1 vs. uniprot
Match: D7FL51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL51_ECTSI) HSP 1 Score: 105 bits (261), Expect = 6.430e-21 Identity = 53/102 (51.96%), Postives = 60/102 (58.82%), Query Frame = 3 Query: 891 HGRKTDIRTFDGPVDIDEASSIVAEGAPAFGWFAFPEKNKHLEEAF---GAPSWTLLDAYTPTVLRPDMHADG------LQCCCPGPLDRWIALLYNVLLVE 1169 HG RTFDGPVD+D A +VA G + W FPE N LEEAF W LDAYTPT+LRPD H G L C PGP+D WI LLYN+LL + Sbjct: 262 HGVTCTERTFDGPVDVDTALDLVASGPHQYQWGRFPEYNAILEEAFLINATDGWKELDAYTPTLLRPDFHLGGDDNPDCLHYCIPGPIDHWIRLLYNMLLAK 363
BLAST of mRNA_L-elsbetiae_contig10767.710.1 vs. uniprot
Match: D8LHR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR2_ECTSI) HSP 1 Score: 105 bits (262), Expect = 1.080e-20 Identity = 52/95 (54.74%), Postives = 62/95 (65.26%), Query Frame = 3 Query: 891 HGRKTDIRTFDGPVDIDEASSIVAEGAPAFGWFAFPEKNKHLEEAFGAP-SWTLLDAYTPTVLRPDMHA---DGLQCCCPGPLDRWIALLYNVLL 1163 HG D R F GPV++D A +V +G P F W +KN LEEAF A WTLLDAY+PT+LR D HA DGL C PGP+D W+ LLYN+LL Sbjct: 335 HGESFD-RMFTGPVNLDTALDLVEKGPPEFEWTTILDKNTLLEEAFEATHGWTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILL 428
BLAST of mRNA_L-elsbetiae_contig10767.710.1 vs. uniprot
Match: A0A6H5JZZ9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ9_9PHAE) HSP 1 Score: 103 bits (256), Expect = 3.440e-20 Identity = 51/102 (50.00%), Postives = 60/102 (58.82%), Query Frame = 3 Query: 891 HGRKTDIRTFDGPVDIDEASSIVAEGAPAFGWFAFPEKNKHLEEAF---GAPSWTLLDAYTPTVLRPDMHADG------LQCCCPGPLDRWIALLYNVLLVE 1169 HG RTFDGPVD+D A +VA G + W FP+ N LEEAF W LDAYTPT+LRPD H G L C PGP+D W+ LLYN+LL + Sbjct: 275 HGVTCTERTFDGPVDVDTALDLVASGPHQYQWGRFPKYNAILEEAFLSNATDGWKELDAYTPTLLRPDFHLGGDENPDCLHYCIPGPIDHWVRLLYNMLLAK 376
BLAST of mRNA_L-elsbetiae_contig10767.710.1 vs. uniprot
Match: A0A6H5J9Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Y7_9PHAE) HSP 1 Score: 100 bits (250), Expect = 8.020e-20 Identity = 51/95 (53.68%), Postives = 61/95 (64.21%), Query Frame = 3 Query: 891 HGRKTDIRTFDGPVDIDEASSIVAEGAPAFGWFAFPEKNKHLEEAFGAPSW-TLLDAYTPTVLRPDMHA---DGLQCCCPGPLDRWIALLYNVLL 1163 HG D R F GPV++D A +V +G P F W +KN LEEAF A TLLDAY+PT+LR D HA DGL C PGP+D W+ LLYN+LL Sbjct: 212 HGESFD-RMFTGPVNLDTALDLVEKGPPEFEWTTIRDKNTLLEEAFDATHGRTLLDAYSPTILRADSHASATDGLHYCLPGPIDHWVVLLYNILL 305
BLAST of mRNA_L-elsbetiae_contig10767.710.1 vs. uniprot
Match: D7FL53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL53_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 4.960e-19 Identity = 49/95 (51.58%), Postives = 57/95 (60.00%), Query Frame = 3 Query: 912 RTFDGPVDIDEASSIVAEGAPAFGWFAFPEKNKHLEEAF---GAPSWTLLDAYTPTVLRPDMHADG------LQCCCPGPLDRWIALLYNVLLVE 1169 RTFDGPVD+D A +VA G + W FPE N LEEAF W LDAYTPT+LRPD H G L C PGP+ W+ LLYN+LL + Sbjct: 280 RTFDGPVDVDTALDLVASGPHQYQWGRFPEYNAMLEEAFLINATDGWKELDAYTPTLLRPDFHLGGDDNPDCLHYCIPGPIYHWVRLLYNMLLAK 374
BLAST of mRNA_L-elsbetiae_contig10767.710.1 vs. uniprot
Match: D8LT34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT34_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 8.680e-16 Identity = 43/89 (48.31%), Postives = 54/89 (60.67%), Query Frame = 3 Query: 912 RTFDGPVDIDEASSIVAEGAPAFGWFAFPEKNKHLEEAFGAP-SWTLLDAYTPTVLRPDMHA---DGLQCCCPGPLDRWIALLYNVLLV 1166 R FDGPV+ AS +VAE ++ W +F +N L++AF W LLDAY+PT+LRPD H D L C P P D W LL N+LLV Sbjct: 38 RMFDGPVNKIIASKLVAEAPGSYEWNSFESRNVQLQKAFSPDRGWKLLDAYSPTLLRPDSHIANNDCLHYCMPDPADHWARLLCNILLV 126 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10767.710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10767.710.1 >prot_L-elsbetiae_contig10767.710.1 ID=prot_L-elsbetiae_contig10767.710.1|Name=mRNA_L-elsbetiae_contig10767.710.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp MHGRKTDIRTFDGPVDIDEASSIVAEGAPAFGWFAFPEKNKHLEEAFGAPback to top mRNA from alignment at L-elsbetiae_contig10767:724..4038- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10767.710.1 ID=mRNA_L-elsbetiae_contig10767.710.1|Name=mRNA_L-elsbetiae_contig10767.710.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3315bp|location=Sequence derived from alignment at L-elsbetiae_contig10767:724..4038- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10767:724..4038- >mRNA_L-elsbetiae_contig10767.710.1 ID=mRNA_L-elsbetiae_contig10767.710.1|Name=mRNA_L-elsbetiae_contig10767.710.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=912bp|location=Sequence derived from alignment at L-elsbetiae_contig10767:724..4038- (Laminarionema elsbetiae ELsaHSoW15)back to top |