mRNA_L-elsbetiae_contig1074.688.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1074.688.1 vs. uniprot
Match: D7FYM2_ECTSI (FkbM family methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYM2_ECTSI) HSP 1 Score: 754 bits (1948), Expect = 8.990e-254 Identity = 529/946 (55.92%), Postives = 636/946 (67.23%), Query Frame = 1
Query: 91 DHDASSVSFCSDLHTPMKFHHEPPSPRQD-------PATPVAWSRSTGNRTHPNIIDKSFS----RE-ADVTAHIYSSSSSGA-DSSVEEMATRRHQQELHQR---ASGRQHRRSDRQRTRPTPA-----DDTMAVALLKSELQATRSQVEQKEVVTRSLQRQLDQRGDIEAQTQARAEEDLVAALAKASGLKEELARTSQLLVEGALAKQHLEQRCSILTQDLHKSVARTTQLEEEVSVSRAELVRISGALHARRGTDVVDAERAFGEELQRVQESATREARGLRQEASNVRAALELTKTKLRKSCVERDSWREEAEALSSEAGTLRETVHALRQYSENDTIDQLLGQASAQPAVSRWKRRAEELESLQRVVSSPEGSAFSSSNSETGTSHCTESVEPSVSPRASG-PRLAAPDPATTPAREQKEERYELEEARHEAVTSSLRQELSEAKETLAMMEEEVATAVLAAREQVAGRVAAETRVKSLQREAEANARAAREDVVTRRAAKARDMARLKNVIQQDMVDELFKLQREVREQKQEEKP-HTADGAAPCKCLDGCSLQTLGEDKACQTDDAI----TPSAEEGALVVHEDALSRACDACSTCGIDSV--GSDGANLVSPLAITAASEEEAEKRIAAAMASATVAQVGATAWASAFSAATHLFHAALVSLCDEATSGLG---EGDGRHAFVVPLLPGMEASGSNRASSSAVVPWVLGEAKTDAATALQVLRDSVQSAVEGIRLAAGYAAQKMVPPIS---NVATIGSQTVPEPPAAVVPVVTRN---------------TTGSQTNEEPERDVRGARQHHIGVQVDSRPKRRNAETFTGAVG---APAWEGGIDGRCFEGAKGGDDGRPRTKQVD-GRMEELERTAGALSQALQRAEVEKRELELMLTRRFEHEKATLLEQQRDVFEADIGELNACMMAIVHDF 2766
++DAS VSF S+ TP K H+ P SPR D P PV WSR ++D + RE ADVT IYSSSSS A + S E +A RHQ + H R ++ RR+DR + VALL +EL RSQ+EQK+VV RSLQRQLDQRG++EAQTQARAEEDLVAALAKASGLKEEL RTSQLLV+GALA+QHLEQRCS+LT++L K+ RTT+LE EV+VSRAE+VRISGALHARR TDVVDAERAFGEELQRVQESA RE R L QEAS +R LE TK+KLR +C ERDSWREEA++ SSEA TLRETV ALRQYSENDTIDQLLGQ VSRWKRRAEELE+LQRV SSPE SAF S+SET S CTESVEP SP G P LAA TT +E+KEE ++ HEA SLRQELSEAK++L M EEVA AVL AR+Q A R AAE+ V+ LQR+AEANARAARE VV RRAAKARDMA LK IQQDMVDEL KLQ EVR+Q+QEE+ H +C S + +G DKACQ+D+ I + S EEG +VV + L++ AC CG+D G+DG+++V+ +T E+EAE+R++AA+ASA VAQVGATAWASAFSAA LFH ALVSLC++A G +G+GR A V+ L G+ + N ASS A+VPW EA+ DAA A++VLRD V+S++E R A + P +S +AT+GSQT EPP V+R T+GSQT+E +++ ++H++GVQ + R ET GA G APAWEGG+D RC EG K D R K D RMEELE AGALS ALQRAE EK LE LTRRF+ EKA L++QRD +EADIG L+ MA++ DF
Sbjct: 31 NNDASLVSFGSEEPTPTKHHYVPRSPRDDAYSNTARPWRPVGWSRVVDTSVPTAVVDNPEAGLGGREVADVTTRIYSSSSSCATERSTERVA--RHQGKRHHRHTDSAADHERRTDRXXXXXXXXXXXXXETASTVALLTNELVIVRSQIEQKDVVVRSLQRQLDQRGELEAQTQARAEEDLVAALAKASGLKEELTRTSQLLVDGALARQHLEQRCSVLTEELQKTATRTTELENEVAVSRAEVVRISGALHARRSTDVVDAERAFGEELQRVQESAARETRTLGQEASGLRTLLEQTKSKLRNACGERDSWREEADSFSSEAATLRETVQALRQYSENDTIDQLLGQ------VSRWKRRAEELENLQRVASSPERSAFDGSSSETEPSRCTESVEPLPSPTMEGGPPLAAEAIPTTVFQEEKEEHEKVLGDGHEAEIHSLRQELSEAKKSLVMKGEEVAAAVLEARQQAAMRAAAESCVEGLQRKAEANARAAREHVVARRAAKARDMANLKIAIQQDMVDELHKLQCEVRKQRQEEQQLHGTTDTGLSECSGERSREPVGLDKACQSDNTIASIASSSTEEG-VVVESNILNKVGAACPACGVDLADSGADGSSIVASPKVTVVLEDEAERRVSAALASAAVAQVGATAWASAFSAARRLFHTALVSLCEQADCLFGADAKGNGRQALVLSPLVGLTTALRNEASS-AMVPWAPSEAEADAAAAMEVLRDDVESSMERFRSALADHLVRTAP-LSLTLTMATVGSQTTAEPPTDSTTAVSRTXXXXXXXXXXXLPRATSGSQTDEVGIVELKVDQRHNVGVQAGNLGGWRT-ETAPGAGGRGGAPAWEGGMDSRCSEGEKYDGDRSWRPKSEDHARMEELELKAGALSAALQRAEKEKSNLERSLTRRFKREKAMQLKKQRDKYEADIGALHVSTMALLQDF 964
BLAST of mRNA_L-elsbetiae_contig1074.688.1 vs. uniprot
Match: A0A6H5JZ16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ16_9PHAE) HSP 1 Score: 389 bits (1000), Expect = 2.380e-121 Identity = 253/393 (64.38%), Postives = 287/393 (73.03%), Query Frame = 1
Query: 1 MEALSRKTEKEKLVELEEMLADATTLTGQGDHDASSVSFCSDLHTPMKFHHEPPSPRQDPAT-------PVAWSRSTGNRTHPNIIDKSF------SRE-ADVTAHIYSSSSS-GADSSVEEMATRRHQQELHQRASGRQH-RRSDRQRTR--PTPADD---TMAVALLKSELQATRSQVEQKEVVTRSLQRQLDQRGDIEAQTQARAEEDLVAALAKASGLKEELARTSQLLVEGALAKQHLEQRCSILTQDLHKSVARTTQLEEEVSVSRAELVRISGALHARRGTDVVDAERAFGEELQRVQESATREARGLRQEASNVRAALELTKTKLRKSCVERDSWREEAEALSSEAGTLRETVHALRQYSENDTIDQLLGQASAQPAVSRWKRRA 1116
MEALSRKTEKEKL +LE MLADAT +G DAS VSF S+ TP K H+ P SPR D A+ PV WSR P ++D RE ADVT IYSSSSS + S E + RRHQ + R + H RR+DR+R + PTP D VALL +EL RSQ+EQK+VV RSLQRQL+QRG+IEAQTQARAEEDLVAALAKASGLKEEL RTSQLLV+GALA+QHLEQRCS+LT++L KS RT +LE EV+VSRAE+VRISGALHARR TDVVDAERAFGEELQRVQESA RE R L+QEAS +R LE TK+KLR +C ERDSWREEA++ SSEA TLRETV ALRQYSENDTIDQLLGQA A A S + RA
Sbjct: 1 MEALSRKTEKEKLADLEAMLADATC-SGDVTDDASLVSFGSEEPTPTKHHYVPRSPRDDAASNTAGPWRPVGWSRVVDTSV-PTVVDNPVLEAGVGGREVADVTTRIYSSSSSCTTERSTERVVPRRHQGKRPHRHTAADHERRTDRRRRQRHPTPERDHETAATVALLTNELVIVRSQIEQKDVVVRSLQRQLEQRGEIEAQTQARAEEDLVAALAKASGLKEELTRTSQLLVDGALARQHLEQRCSVLTEELQKSATRTAELENEVAVSRAEVVRISGALHARRSTDVVDAERAFGEELQRVQESAARETRTLKQEASGLRTLLEQTKSKLRNACGERDSWREEADSFSSEAATLRETVQALRQYSENDTIDQLLGQAWANLAGSHSQPRA 391
BLAST of mRNA_L-elsbetiae_contig1074.688.1 vs. uniprot
Match: A0A6H5K4I8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I8_9PHAE) HSP 1 Score: 350 bits (899), Expect = 9.050e-105 Identity = 265/537 (49.35%), Postives = 343/537 (63.87%), Query Frame = 1
Query: 1249 PRLAAPDPATTPAREQKEERYELEEARHEAVTSSLRQELSEAKETLAMMEEEVATAVLAAREQVAGRVAAETRVKSLQ----REAEANARAAREDVVTRRAAKARDMARLKNVIQQDMVDELFKLQREVREQKQEEKP-HTADGAAPCKCLDGCSLQTLGEDKACQTDDAITPSAEEGALVVHEDALSRACDACSTCGIDSV--GSDGANLVSPLAITAASEEEAEKRIAAAMASATVAQVGATAWASAFSAATHLFHAALVSLCDEATSGLG---EGDGRHAFVVPLLPGMEASGSNRASSSAVVPWVLGEAKTDAATALQVLRDSVQSAVEGIRLA-AGYAAQKMVPPIS-NVATIGSQTVPEPPAAVVPVVTRNTTG---------------SQTNEEPERDVRGARQHHIGVQVDSRPKRRNAETFTGAVG---APAWEGGIDGRCFEGAKGGDDGRPRTKQVD-GRMEELERTAGALSQALQRAEVEKRELELMLTRRFEHEKATLLEQQRDVFEADIGELNACMMAIVHDF 2766
P LAAP TT ++E+KEE ++ R EA SLRQELSEAK++LAM EEVA AVL AR+Q A R AE+ V+ LQ R+AEANARAARE VV RRAAKARDMA LK IQQDMV+EL KLQ EVR+Q+QEEK H KC S + +G DKACQ+DD I S++E +++ D L+R ACS CG+D G+DG+++V+ +T E+EAEKR++AA+ASA +AQVGATAWASAFSAA LFHAAL SLC++A G +G+GR A V+ L G+ + + ASS A+VPW EA+ DAA A++VLRD V+S+V+ I+ A A ++ + ++ +AT+GSQT E P V+ SQT+E +++ ++H++GVQ RR ET GA G APAWEGG++ RC EG D R K D RM+ELE AGALS ALQR+E EK LE LTRRF+ EKA L++QRD +EADIG L+A MA++ DF
Sbjct: 5 PPLAAP---TTVSQEEKEEHEKVLGDRQEAEIHSLRQELSEAKKSLAMKGEEVAAAVLEARQQAAMRAVAESCVEGLQATLGRKAEANARAAREHVVARRAAKARDMANLKIAIQQDMVNELHKLQCEVRKQRQEEKKLHGTKDTELSKCSGERSREPVGVDKACQSDDTIASSSKEEGVMMESDILNRVGAACSACGVDLTDSGADGSSIVASPKVTVVLEDEAEKRVSAALASAAMAQVGATAWASAFSAARCLFHAALASLCEQADCLFGADAKGNGRQALVLSPLVGLTTALRDEASS-AMVPWAPSEAEADAAAAMEVLRDDVESSVKRIQSALADHSERTAALSLALTMATVGSQTTAESPTDSAITVSXXXXXXXXXXXXXXXXXXXXSQTDEVGIMELKVGQRHNVGVQTGYLGGRR-PETAPGAGGRGGAPAWEGGMESRCREGETYDGDRLWRPKSEDHARMDELELKAGALSAALQRSEKEKSSLERSLTRRFKREKAMQLKKQRDKYEADIGALHASTMALLQDF 536 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1074.688.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1074.688.1 >prot_L-elsbetiae_contig1074.688.1 ID=prot_L-elsbetiae_contig1074.688.1|Name=mRNA_L-elsbetiae_contig1074.688.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=944bp MEALSRKTEKEKLVELEEMLADATTLTGQGDHDASSVSFCSDLHTPMKFHback to top mRNA from alignment at L-elsbetiae_contig1074:6086..12756- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1074.688.1 ID=mRNA_L-elsbetiae_contig1074.688.1|Name=mRNA_L-elsbetiae_contig1074.688.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6671bp|location=Sequence derived from alignment at L-elsbetiae_contig1074:6086..12756- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1074:6086..12756- >mRNA_L-elsbetiae_contig1074.688.1 ID=mRNA_L-elsbetiae_contig1074.688.1|Name=mRNA_L-elsbetiae_contig1074.688.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5664bp|location=Sequence derived from alignment at L-elsbetiae_contig1074:6086..12756- (Laminarionema elsbetiae ELsaHSoW15)back to top |