mRNA_L-elsbetiae_contig10724.673.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10724.673.1
Unique NamemRNA_L-elsbetiae_contig10724.673.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10724.673.1 vs. uniprot
Match: D7G8N3_ECTSI (Calcium/ calmodulin-dependent protein kinase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8N3_ECTSI)

HSP 1 Score: 471 bits (1211), Expect = 1.430e-155
Identity = 242/284 (85.21%), Postives = 252/284 (88.73%), Query Frame = 1 
Query:    1 SSRYQLLEQVGSGASGTVWKCSLASGQGVG-------AEDDPVPGKIYAAKIIDLRPFKLRERFSMQRLMREVDIMQRLRHPNIIRLVEALDTPEQLVLVLEYAPGVELFDAILSKTKFSEEEARPVFV--ARALQYMHSKQIVHRDVKPENVMIIDRPTEDGLYPEAKLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEVEEKRGGRGKPYGTPVDCWSLGAMLYVMLVARFPEFQVQGVRKHVRMVGPLWDRVSAPAKELIRALMAFDAGARLTVDQVCMH 825
            SSRY+LLEQVGSGASGTVWKC LA G G         A +DPVPG+IYAAKIIDLRPFKLRERFSMQRLMREVDIM+RLRHPNII LVEALDTPEQLVL+LEYAPGVELFDAILSK  FSE EARPVFV  ARALQYMHSK IVHRDVKPENVMIIDR   DGLYPEAKLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEVEE++GG+GKPYGTPVDCWSLGAMLYVMLVARFPEFQVQG RKHVRM G  WD+VSA AKELIR LMAFDAGARLTVD+   H
Sbjct:   37 SSRYELLEQVGSGASGTVWKCRLAPGNGPPKRAGGPVAGEDPVPGRIYAAKIIDLRPFKLRERFSMQRLMREVDIMRRLRHPNIIHLVEALDTPEQLVLILEYAPGVELFDAILSKASFSESEARPVFVQVARALQYMHSKSIVHRDVKPENVMIIDRTAPDGLYPEAKLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEVEERKGGKGKPYGTPVDCWSLGAMLYVMLVARFPEFQVQGARKHVRMHGAAWDKVSAEAKELIRNLMAFDAGARLTVDKALRH 320
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BLAST of mRNA_L-elsbetiae_contig10724.673.1 vs. uniprot
Match: A0A835YLX8_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLX8_9STRA)

HSP 1 Score: 303 bits (776), Expect = 2.620e-100
Identity = 158/264 (59.85%), Postives = 194/264 (73.48%), Query Frame = 1 
Query:   31 GSGASGTVWKCSLASGQGVGAEDDPVPGKIYAAKIIDLRPFKLRERFSMQRLMREVDIMQRLRHPNIIRLVEALDTPEQLVLVLEYAPGVELFDAILSKTKFSEEEARPVF--VARALQYMHSKQIVHRDVKPENVMIIDRPTEDGLYPEAKLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEVEEKRGGRGKPYGTPVDCWSLGAMLYVMLVARFPEFQVQGV-RKHVRMVGPLWDRVSAPAKELIRALMAFDAGARLTVDQ 813
            G GAS TVW+C            D   G  YAAK+IDLRP K RERF+++RL REV+IM++L HP+I+ +  A +T +QL+LVLE+A GVELFDAIL++ ++SE++ARPVF  VARAL Y+HS  ++HRDVKPEN+M+ D  + DGL+PEAKLLDFGLSK +  D G S ARTFVGTP YLAPEVE +  G+G  YG  VDCWSLGA+LYVML ARFPEF V G  R+ VRM GP+WD +S  AK LIR LMA D   R+T DQ
Sbjct:    1 GKGASSTVWRCV-----------DRRSGVAYAAKVIDLRPLKFRERFNVERLRREVNIMRKLHHPSIVNMENAFETEDQLILVLEFAQGVELFDAILARKRYSEDDARPVFLQVARALYYLHSMNVLHRDVKPENIMVRDVVSADGLFPEAKLLDFGLSKMVGEDMG-SAARTFVGTPCYLAPEVEMRSRGQGGSYGAAVDCWSLGAVLYVMLAARFPEFTVLGGGRQSVRMAGPVWDGISDAAKALIRGLMAHDPTQRMTADQ 252
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BLAST of mRNA_L-elsbetiae_contig10724.673.1 vs. uniprot
Match: A0A4D9CU84_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU84_9STRA)

HSP 1 Score: 282 bits (722), Expect = 5.240e-88
Identity = 152/274 (55.47%), Postives = 184/274 (67.15%), Query Frame = 1 
Query:   10 YQLLEQVGSGASGTVWKCSLASGQGVGAEDDPVPGKIYAAKIIDLRPFKLRERFSMQRLMREVDIMQRLRHPNIIRLVEALDTPEQLVLVLEYAPGVELFDAILSKTKFSEEEARPVFV--ARALQYMHSKQIVHRDVKPENVMIIDRPTEDGLYPEAKLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEVEEKRGGRGKPYGTPVDCWSLGAMLYVMLVARFPEFQVQGVRKHVRMVGPLWDRVSAPAKELIRALMAFDAGARLTVDQVCMH 825
            Y L E++G GA   V +C+           + V G+ +A K++DLRP +LRE F   RL REV+IMQRL HP+IIRL    +    LVLVLEYA G ELFD+IL K +++EE ARP+FV  A AL Y+H   IVHRDVKPENV+++D  + +G YP AKLLDFGLSK I  D G S ARTFVGTP YLAPEVE +  GRG  YGT VDCWSLGA+LYVMLVARFPEF        V++  P W  VSA AK+L+R LM  D G R TV++   H
Sbjct:   70 YALHEEIGRGAFSVVHRCT-----------NRVTGEDFAVKLMDLRPLQLRENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEETARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMIGQDDG-SAARTFVGTPCYLAPEVEARAYGRGGGYGTKVDCWSLGAVLYVMLVARFPEFDRSQGGMAVKLEAPAWGGVSAAAKDLLRCLMQVDPGLRFTVEEALQH 331
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BLAST of mRNA_L-elsbetiae_contig10724.673.1 vs. uniprot
Match: W7TL39_9STRA (Protein serine threonine kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TL39_9STRA)

HSP 1 Score: 250 bits (638), Expect = 3.150e-79
Identity = 133/226 (58.85%), Postives = 160/226 (70.80%), Query Frame = 1 
Query:   10 YQLLEQVGSGASGTVWKCSLASGQGVGAEDDPVPGKIYAAKIIDLRPFKLRERFSMQRLMREVDIMQRLRHPNIIRLVEALDTPEQLVLVLEYAPGVELFDAILSKTKFSEEEARPVFV--ARALQYMHSKQIVHRDVKPENVMIIDRPTEDGLYPEAKLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEVEEKRGGRGKPYGTPVDCWSLGAMLYVMLVARFPE 681
            Y L E++G GA   V +C+           + + G+ +A K++DLRP +LRE F   RL REV+IMQRL HP+IIRL    +    LVLVLEYA G ELFD+IL K +++EEEARP+FV  A AL Y+H   IVHRDVKPENV+++D  + +G YP AKLLDFGLSK I  D G S ARTFVGTP YLAPEVE +  GRG  YGT VDCWSLGA+LYVMLVARFPE
Sbjct:   70 YALHEEIGRGAFSVVHRCT-----------NRITGEDFAVKLMDLRPLQLRENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEEEARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMIGQDDG-SAARTFVGTPCYLAPEVEARAYGRGGGYGTKVDCWSLGAVLYVMLVARFPE 283
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BLAST of mRNA_L-elsbetiae_contig10724.673.1 vs. uniprot
Match: A0A7S3HNC2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNC2_9STRA)

HSP 1 Score: 261 bits (666), Expect = 6.860e-77
Identity = 145/277 (52.35%), Postives = 180/277 (64.98%), Query Frame = 1 
Query:    4 SRYQLLEQVGSGASGTVWKCSLASGQGVGAEDDPVPGKIYAAKIIDLRPFKLRERFSMQRLMREVDIMQRLRHPNIIRLVEALDTPEQLVLVLEYAPGVELFDAILSKTKFSEEEARPVFV--ARALQYMHSKQIVHRDVKPENVMIIDRPTEDGLYPEAKLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEVEEKRGGRGKPYGTPVDCWSLGAMLYVMLVARFPEFQVQGVRKHVRMVGP-LWDRVSAPAKELIRALMAFDAGARLTVDQVCMH 825
            S+Y ++ ++G G   TV++             D   GK YA KI+DLRP +LRERF+  RL REVDIM+RL HPNII+ V+  +  + L++V+EY PG ELFD IL +  F EE+ARP+FV  ARAL Y+HS  I+HRDVKPENV++   P   G    AKLLDFGLSK       GS A+TFVGTP Y+APEVE    G G  Y  P DCWSLGA+LYVMLVARFPEF+     K V  + P LW  VS+ AK+LIR+LM  +  ARLT+    MH
Sbjct:   66 SKYDIIREIGKGGFSTVYQTK-----------DRRTGKDYAVKIVDLRPLRLRERFNPLRLRREVDIMKRLHHPNIIQFVDVFEDNDNLMMVMEYCPGQELFDVILDRKFFHEEDARPIFVQIARALYYLHSLNILHRDVKPENVLVSSIPDAQGNIV-AKLLDFGLSKNAG---NGSAAKTFVGTPCYVAPEVEYTSKGLGGTYSFPADCWSLGALLYVMLVARFPEFEQDSSGKIVVKLSPSLWGSVSSEAKDLIRSLMNTNPAARLTMGSTLMH 327
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BLAST of mRNA_L-elsbetiae_contig10724.673.1 vs. uniprot
Match: A0A7S3XLU5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLU5_HETAK)

HSP 1 Score: 236 bits (603), Expect = 1.910e-73
Identity = 133/278 (47.84%), Postives = 182/278 (65.47%), Query Frame = 1 
Query:   10 YQLLEQVGSGASGTVWKCSLASGQGVGAEDDPVPGKIYAAKIIDLRPFKLRERFSMQRLMREVDIMQRLRHPNIIRLVEALDTPEQLVLVLEYAPGVELFDAILSKTK--FSEEEARPVF--VARALQYMHSKQIVHRDVKPENVMIIDRPTEDGLYPEAKLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEVEEKRGGRGKPYGTPVDCWSLGAMLYVMLVARFPEFQVQ--GVRKHVRMVGPLWDRVSAPAKELIRALMAFDAGARLTVDQVCMH 825
            Y L EQ+GSGAS  V+ C+               G  YA K++D+RP K R  FS  +++ EV I+Q+ +HPNI++LV+ +   ++L L++EYAPG ELFD IL++ +  ++EE+ARP+F  VA+AL Y+HS  I+HRD+KPEN++++D P  +   P AK+LDFGLSK +++  G S+A+TFVGTP YLAPEVE  R  +   YG  VD WSLGA+L+VMLVARFPEF+    G +  VR    +W   SA AK+LI  LM      RLTV Q   H
Sbjct:   38 YILGEQIGSGASSIVYTCTNMKN-----------GVEYAVKVMDIRPLKFRADFSKSKMINEVHILQKAKHPNIVQLVDTILEGDRLYLIMEYAPGEELFDGILNQPEGHYTEEKARPIFHQVAQALVYLHSVGIIHRDIKPENILLLDNPDPNST-PVAKILDFGLSKNVES--GMSMAKTFVGTPCYLAPEVESSRQTKAA-YGKEVDAWSLGAVLWVMLVARFPEFEPLPGGAKGPVRFSPEIWSGASAAAKDLIAGLMCPSPQRRLTVAQALAH 300
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BLAST of mRNA_L-elsbetiae_contig10724.673.1 vs. uniprot
Match: A0A835YWD1_9STRA (Putative death-associated protein kinase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWD1_9STRA)

HSP 1 Score: 221 bits (564), Expect = 1.190e-69
Identity = 117/185 (63.24%), Postives = 142/185 (76.76%), Query Frame = 1 
Query:   31 GSGASGTVWKCSLASGQGVGAEDDPVPGKIYAAKIIDLRPFKLRERFSMQRLMREVDIMQRLRHPNIIRLVEALDTPEQLVLVLEYAPGVELFDAILSKTKFSEEEARPVF--VARALQYMHSKQIVHRDVKPENVMIIDRPTEDGLYPEAKLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEV 579
            G GAS TVW+C+  +            G   AAK++DLRP K RERFSM+RL REVDIM++LRHPNI+RL +  +T +QLVLVLEYA GVELFDAIL++ +++E++ARP+F  VARAL Y+HS QIVHRDVKPEN+M+ +  T DGLYPEAKLLDFGLSK +  D G S ARTFVGTP YLAPEV
Sbjct:    1 GKGASSTVWRCARRA-----------DGDALAAKVMDLRPLKFRERFSMERLRREVDIMRQLRHPNIVRLEDVFETDDQLVLVLEYARGVELFDAILTRGRYTEDDARPIFLQVARALYYLHSLQIVHRDVKPENIMVSE--TADGLYPEAKLLDFGLSKMVGEDMG-SAARTFVGTPCYLAPEV 171
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BLAST of mRNA_L-elsbetiae_contig10724.673.1 vs. uniprot
Match: A0A7S2WFE1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFE1_9STRA)

HSP 1 Score: 234 bits (597), Expect = 4.240e-68
Identity = 130/278 (46.76%), Postives = 177/278 (63.67%), Query Frame = 1 
Query:   10 YQLLEQVGSGASGTVWKCSLASGQGVGAEDDPVPGKIYAAKIIDLRPFKLRERFSMQRLMREVDIMQRLRHPNIIRLVEALDTPEQLVLVLEYAPGVELFDAILSKTKFSEEEARPVFV--ARALQYMHSKQIVHRDVKPENVMIIDRPTEDGLYP-EAKLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEVEEKR---GGRGKPYGTPVDCWSLGAMLYVMLVARFPEFQVQGVRKHVRMVGPLWDRVSAPAKELIRALMAFDAGARLTVDQVCMH 825
            Y   E +G GA  TV +C                G+  A K+IDLRP +LR+ F   RL+REV IM+RL HPNI++L +  + P+ L+LV+E  PGVELFD+ILSK++++E+EARPVF+  A AL+Y+H + IVHRD+KPEN+++++    +       KLLDFGLSK++D++ G S A+TFVGTP YLAPEVE  +   G  G+ YG  VD WSLGA+L+V L A+FP F        V + G  W+  +   K+LIR LM  D   RLT+DQ   H
Sbjct:   55 YARHELLGKGAFSTVHRCVRHD-----------TGEACAVKVIDLRPLRLRQHFDAHRLLREVTIMRRLDHPNIVKLYDVFEEPDSLLLVMELVPGVELFDSILSKSRYTEDEARPVFIQIASALKYLHDQNIVHRDIKPENIVLVEYSKGERKNGCTVKLLDFGLSKSLDSEFG-SAAKTFVGTPCYLAPEVESLKTTNGTSGQTYGLAVDVWSLGAVLFVTLAAQFPAFDRATGVPLVLLDGKAWEGATPVVKDLIRNLMHPDPAQRLTMDQALSH 320
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BLAST of mRNA_L-elsbetiae_contig10724.673.1 vs. uniprot
Match: A0A7S1UJ38_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ38_9STRA)

HSP 1 Score: 232 bits (592), Expect = 4.450e-67
Identity = 136/285 (47.72%), Postives = 174/285 (61.05%), Query Frame = 1 
Query:   10 YQLLEQVGSGASGTVWKCSLASGQGVGAEDDPVPGKIYAAKIIDLRPFKLRERFSMQRLMREVDIMQRLRHPNIIRLVEALDTPEQLVLVLEYAPGVELFDAILSKTKFSEEEARPVFVAR--ALQYMHSKQIVHRDVKPENVMII----------DRPTEDGL-YPEAKLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEVEEKRGGRGKPYGTPVDCWSLGAMLYVMLVARFPEFQVQGVRKHVRMVGPLWDRVSAPAKELIRALMAFDAGARLTVDQVCMH 825
            Y L E++G GA  TV+KC     +G G E        +AAK+IDLRP +LR+ F + RL RE +IM++L++P+II+L E  +T + L+LV+EY PGVELFDAI+++    E  A  +F     AL Y+H K I+HRD+KPEN+++           D PT     YP  KLLDFGLSK +    GGS ARTFVGTP Y+APEVE    G+ + YGT VD WS GA+LYVML+ARFPE  V      V M       VSA A++LIR LM  D   RLT D    H
Sbjct:   23 YDLREELGRGAFSTVYKCGH---RGTGME--------FAAKVIDLRPLRLRQAFKIDRLRREYEIMRKLKNPHIIQLEEVFETADTLILVMEYCPGVELFDAIIAQRSCPEPAAAIIFYQCLVALSYLHRKHIIHRDIKPENILLCKADAEGRSTADDPTAASRDYPMVKLLDFGLSKTLSPSEGGSAARTFVGTPCYVAPEVEANAQGKKQEYGTKVDLWSAGALLYVMLIARFPE--VDRETYDVSMKTLERAGVSAGAQDLIRKLMEADPEKRLTADAAMAH 294
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BLAST of mRNA_L-elsbetiae_contig10724.673.1 vs. uniprot
Match: A0A7S2XZA1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZA1_9STRA)

HSP 1 Score: 216 bits (549), Expect = 9.650e-67
Identity = 120/218 (55.05%), Postives = 149/218 (68.35%), Query Frame = 1 
Query:   82 GVGAEDDPVPGKIYAAKIIDLRPFKLRERFSMQRLMREVDIMQRLRHPNIIRLVEALDTPEQLVLVLEYAPGVELFDAILSKTKFSEEEARPVFVA--RALQYMHSKQIVHRDVKPENVMIIDRPTEDGLYPEAKLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEVEEKRGGRGKP----------YGTPVDCWSLGAMLYVMLVARFPEF-QVQG 696
            G G    PV    YA K++D RP +  E F   R++REVDIM++L HP+IIRL E   T ++L+LVLEY PG+ELFDAIL +  F E EARP+FV   +A+QY+H KQI HRDVKPEN++++           AKLLDFGLSK + ++ G S+ +TFVGTP YLAPEVE ++  RG P          YGT VDCWSLGA+LYVMLVARFPEF Q QG
Sbjct:    2 GDGGGPQPV---FYAVKVMDTRPMRFNEGFDPSRMLREVDIMRQLDHPHIIRLHEVFQTDQELLLVLEYCPGLELFDAILQRGHFQEAEARPLFVQILQAIQYLHHKQIAHRDVKPENIILMQGDKV------AKLLDFGLSKRMGSEMG-SLGKTFVGTPCYLAPEVEARQRLRGAPDGERCADLGRYGTAVDCWSLGAVLYVMLVARFPEFMQTQG 209
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10724.673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8N3_ECTSI1.430e-15585.21Calcium/ calmodulin-dependent protein kinase 1 n=1... [more]
A0A835YLX8_9STRA2.620e-10059.85Kinase-like domain-containing protein (Fragment) n... [more]
A0A4D9CU84_9STRA5.240e-8855.47Protein kinase domain-containing protein n=1 Tax=N... [more]
W7TL39_9STRA3.150e-7958.85Protein serine threonine kinase n=1 Tax=Nannochlor... [more]
A0A7S3HNC2_9STRA6.860e-7752.35Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3XLU5_HETAK1.910e-7347.84Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835YWD1_9STRA1.190e-6963.24Putative death-associated protein kinase (Fragment... [more]
A0A7S2WFE1_9STRA4.240e-6846.76Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S1UJ38_9STRA4.450e-6747.72Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2XZA1_9STRA9.650e-6755.05Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10724contigL-elsbetiae_contig10724:118..6319 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score469.9
Seed ortholog evalue8e-130
Seed eggNOG ortholog2880.D7G8N3
KEGG koko:K05869
KEGG Pathwayko04020,ko04024,ko04211,ko04371,ko04380,ko04720,ko04722,ko04725,ko04921,ko04925,ko05031,ko05034,map04020,map04024,map04211,map04371,map04380,map04720,map04722,map04725,map04921,map04925,map05031,map05034
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759
EC2.7.11.17
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Exons6
Model size825
Cds size825
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10724.673.1prot_L-elsbetiae_contig10724.673.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10724 118..6319 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815290.8540876-CDS-L-elsbetiae_contig10724:117..2991622815290.8540876-CDS-L-elsbetiae_contig10724:117..299Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10724 118..299 +
1691682820.5200973-CDS-L-elsbetiae_contig10724:117..2991691682820.5200973-CDS-L-elsbetiae_contig10724:117..299Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10724 118..299 +
1622815290.8626156-CDS-L-elsbetiae_contig10724:1358..14431622815290.8626156-CDS-L-elsbetiae_contig10724:1358..1443Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10724 1359..1443 +
1691682820.5324137-CDS-L-elsbetiae_contig10724:1358..14431691682820.5324137-CDS-L-elsbetiae_contig10724:1358..1443Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10724 1359..1443 +
1622815290.8717978-CDS-L-elsbetiae_contig10724:1999..20951622815290.8717978-CDS-L-elsbetiae_contig10724:1999..2095Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10724 2000..2095 +
1691682820.54114-CDS-L-elsbetiae_contig10724:1999..20951691682820.54114-CDS-L-elsbetiae_contig10724:1999..2095Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10724 2000..2095 +
1622815290.8836205-CDS-L-elsbetiae_contig10724:3330..34411622815290.8836205-CDS-L-elsbetiae_contig10724:3330..3441Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10724 3331..3441 +
1691682820.5647597-CDS-L-elsbetiae_contig10724:3330..34411691682820.5647597-CDS-L-elsbetiae_contig10724:3330..3441Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10724 3331..3441 +
1622815290.8940868-CDS-L-elsbetiae_contig10724:3901..41201622815290.8940868-CDS-L-elsbetiae_contig10724:3901..4120Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10724 3902..4120 +
1691682820.5889382-CDS-L-elsbetiae_contig10724:3901..41201691682820.5889382-CDS-L-elsbetiae_contig10724:3901..4120Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10724 3902..4120 +
1622815290.9055736-CDS-L-elsbetiae_contig10724:6187..63191622815290.9055736-CDS-L-elsbetiae_contig10724:6187..6319Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10724 6188..6319 +
1691682820.602608-CDS-L-elsbetiae_contig10724:6187..63191691682820.602608-CDS-L-elsbetiae_contig10724:6187..6319Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10724 6188..6319 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10724.673.1

>prot_L-elsbetiae_contig10724.673.1 ID=prot_L-elsbetiae_contig10724.673.1|Name=mRNA_L-elsbetiae_contig10724.673.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=275bp
SSRYQLLEQVGSGASGTVWKCSLASGQGVGAEDDPVPGKIYAAKIIDLRP
FKLRERFSMQRLMREVDIMQRLRHPNIIRLVEALDTPEQLVLVLEYAPGV
ELFDAILSKTKFSEEEARPVFVARALQYMHSKQIVHRDVKPENVMIIDRP
TEDGLYPEAKLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEVEEKRGGR
GKPYGTPVDCWSLGAMLYVMLVARFPEFQVQGVRKHVRMVGPLWDRVSAP
AKELIRALMAFDAGARLTVDQVCMH
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mRNA from alignment at L-elsbetiae_contig10724:118..6319+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10724.673.1 ID=mRNA_L-elsbetiae_contig10724.673.1|Name=mRNA_L-elsbetiae_contig10724.673.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6202bp|location=Sequence derived from alignment at L-elsbetiae_contig10724:118..6319+ (Laminarionema elsbetiae ELsaHSoW15)
TCCAGCCGCTACCAACTCCTGGAGCAGGTGGGCTCCGGGGCCTCGGGCAC
GGTGTGGAAGTGCTCCCTGGCGTCAGGACAGGGTGTCGGGGCGGAAGACG
ACCCGGTGCCGGGAAAGATCTACGCGGCCAAGATTATCGACCTGAGGCCT
TTCAAGCTCCGGGAGAGGTTCAGCATGCAGAGGTGGGGGGGTGACAAAAA
TGCACGGGGGCACATTTGACTTTACAGCATTTTCCAGCTGGAACTTTTTA
TTTTATTTATTTATCGAACGAAAGAGTGCAAACGATAAATTATCCGCACA
AATTCAAAACTTGCTTCGCGCCGATTGCGAGTTCTCGGCCTTGTAACTGC
ATTTGGTCGCTCTAAGTTCATAGGGGGTGATTCAAATTGGTTATTTCTGC
GGGCGGTGTGCTCGGGGGCATAGACCGGCGCCGCCCCGTTATGACTGACG
CTAGACAGGGAGGGAGGGAGAGGGGGGAAAGAAGGCAGCGAGCGGCGTGT
GCGTATCTAGCTGTCGATGGATATTGCATTAGGTACGCTGCTGTATATGT
GCTGCACAGCAGTGGGAGATTTCCCCCCTTTCTGAGGCGTTACATTTGAC
AGGGGTTTCTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTGCGTGTGTGTGTGTTTGTCAAAAATGGAACCTAACCCACAATGAGACG
GGACTCCGTGAGACTCAATCGGTATTTCCATATAAGTGACGTAATATTGG
GCCGGCGAGTATTTCAAAAATGGAACCTAACCCACAATGAGACGGGACTC
CGTGAGACTCAATCGGTATTCCATATAAGTGACGTAATATTGGGCCGGCG
AGTATTTTAATTTGTTTTATTTTGACTTGCCAAGCATCAGAGCCGTCTAC
GGCCATTTCTGAATACACAACTATTTCCAGGGGGAGTGCTGTTGTAGACA
CACCGACGCACTAAACCCTCCCTGACCGCCCCCAAGCCACAACGGCGCAG
CATCAGTAATCCGTAAGAGTATTTTTTTGTTTTTGGGGGGGGGTTCTCGC
TCGCTGTATTTTTTTGGGGTGAGATATTTTATCTTACTTCACGTACTTTT
TTGTCAAATGACTACTGCAATAAGGGTTATTATCCATAATATCTCTCTGG
TACTTTTTGCTTTGTTGTGTGCTGCGGTAACTCACGGTCCGGTTGTCTGT
CTGTCTGTCTGCCACGGTTTTGTTTTATGCTTGGTCGGCAGGCTGATGCG
GGAGGTGGACATCATGCAGCGATTGCGCCACCCCAACATCATTCGACTCG
TGGAAGCGCTTGACACGCCCGAACAGGTGGACCTTTTTTTTTTTTTTTTT
TCTCCCATTCATTGGCTTATGTATTCGTCGTCTGCCCCACTGGCCCCCTT
CCTCCACTTACAACTACATAGCTAGACGACCCAACTGGGGTCACACATCA
ATATGAGTGAATTAATGTTGCGGCCTTGCGGAAGCAAGTTTTTTTTTTTT
AAAGACTTTTGTACATGAACCACATGCTTGTACCGGCCTCCACTGGTGAC
AAAACCAGAGGTCAGGCAGTCCCTTCCTGACTTTCTTTCACGAGGCCTAT
TGTTCATTTGCATGCGTTGTGTTTGTAAGCTGCTGTGGGCATGGCCAGCT
TTTGCTCTTTTGCGCGTTCTCACGCGTGAGCGACACCCTTCCTCGACTTC
CTCGCTCTGCTCTGCTCTGCTCTGCTCTGCTCTGCTCTGCTCTGCTTTGC
TCTGCTCTGCTCTGCTCTGCTCTGCTCTGCTCTGCTCTGCTCCGCTCTGC
TCGGCTCTGCTCGGCTCTGCTCGGCTCGGCTCGGCTCGGCTCGGCTCGGC
TCGGCTCGGCTCGGCTCGGCTCGGCTCTGCAGCTGGTGCTCGTGCTGGAG
TACGCTCCCGGAGTGGAGCTGTTCGACGCCATCCTCTCCAAGACCAAGTT
CAGCGAAGAAGAGGCCCGCCCGGTCTTCGTGCAGGCAAGACCAGACCAGA
TCAGACCAAACAAAACTCTCCTGGCAAATTAGGTGTACATACCGTAGGTG
ACACAAGATACCACACCCCCTGGACAGGTTTTGAAAGCTCGATTCCTCCC
CAGCAAGAAGAGTGCTAATGGTGTCGAAAGGGGTGGCGTCGGAAAGATCT
AGTCGAGGGCTGTCCGAAAAGATGCCGTTTGGTGCTGGCACCCTCTTCGT
TACGGAGTAATAGATCTCTCAAAATTCGATCCAGGGGGTGTGGTATCTTG
TGTCACCTACGGTACATACATACCTTTTCGGCCTTTTGGTGCATTTACCT
CTCATATCCTGCGTGTGTTTTCTTAGGAGGGTCCTTTTCTTGACGGCTCC
AGCACTTTTTGAGTTGCCAGTTTTGGGGGGGTTAGTAGCTATCTCGATTA
AAACGAGCTAAATAATGTGAAGAAAACAACTTTTTCTCTGACGATATACT
TTGGAGTGGTATTTATGTAACGAAGTCTACAGAGACGAGACCAAAGACTG
CCTGACCTCACCCCTACCCCTAACCCTAACTCCTATTTACTTATTTACTA
CTACTTTGTGTGCGTGAATTCGCACAGGGAGTTCGCCCAGGGGTGCGAGC
GATAGTTTTTTTGCGGCCTGATCTGTCTCGGACATAACGCGGGGAGTGCC
GCCTACATATTTCGGGAAAACCCCATTTTCGGGAAAATATCTCGGCAAGA
TCTTCCCGGTATTGAACAAACTCTGGCGCCCTCTTCCACATTTATCGAGA
TATTTTTTTACATAGATATCTGTCCCTGAAAAACTATCGCACACCTGTCG
AAACTCACGCATACTTATCGTATGTATGTATATCAAAAAGGCTTCTCTAT
TCGACAAGACCGGTTTTGGTAGAGGCTTCGGCGCGCCTGCCTCGCCCTGA
GTTTTTTCTAGAAAGCCTCTCGAATATATAGCATCGAGTCGATGATTCGA
ACCCGCCTGTGAACCCAAAACCACTGCTGCTGTTGCGTGTTTTCGCGGGC
TTGTCTCGCCTGTCTTTACCTTGTTGCTGCGAACGCCACAGGCTGCGAAG
GCTCTGCGGTACAAGCACTCGAAAGCATATCGTACACCTGTGAACCCAAC
CAGCTGCTGTTTGATTGCTTGCGTGCCTGCCATCTTTTTTCCCGTGCCTC
CACTGATGTTTTTGTCGCTGCTCGATTTATTGGCCGCTTTTCGTCTCGGC
GCCGCGGGCACAGGTTGCGAGGGCTCTACAGTACATGCACTCCAAGCAGA
TCGTGCACCGAGACGTGAAGCCCGAGAACGTCATGATCATCGACCGGCCC
ACAGAGGACGGTCTCTACCCGGAGGTATATACATAGAAGTATATATTTGT
ATACCTATGCGTTTCCACGCGCGTGTGTCTCAAGCCAAACGATTCGTCAT
CCTCTTGTCCTTGGCGTCCTCTCAGCGCGCACGCTTTGAAACAAACTATT
TTTAACAGTACCGACTCTCTCAACCACACCTTCACTGCCAACCACCACCC
CACCCCAAATCACGTACCATGACAAAGTATGTACGTGAAGCACACACACC
ACATGCGTCGAGTGAGTCCTGTTTTATGAGCCCCCCCCACAGACGTTTTG
GCCAGAGAGCTATGCACAATGGTATGAGAAAGAGCTAACACCGCTTTTCC
TCCGCAAAGCTGCAATCCATCGCATGTCGACCCCTCCCCCTACACACCAC
TTTCTCTCCGCAAAGCTCTAATCCATCGCATCTCGACCCCCCCCCTCGCC
GCCGCCACCGCCGCTGCCGCCGCCGACCCCACAGGCGAAGCTCCTAGACT
TCGGCTTGTCCAAGGCGATAGACGCCGACACGGGGGGCTCCGTGGCCCGC
ACCTTCGTGGGGACGCCCTCCTACTTGGCGCCGGAGGTGGAGGAGAAGCG
GGGGGGCAGGGGTAAGCCATACGGCACGCCGGTCGACTGCTGGAGCCTCG
GGGCGATGCTGTACGTCATGCTCGTCGCGCGGTTCCCGGAGTTCCAAGTG
CAGGTGCGGGGGGCTCCGCATGCCGTTATTTTATTTACTAGTACCCCCCC
CTAAATACCAGTAATCTGGAGCCTCGGGCGGGGCCGTGCTCTACGCCATG
CTCGTCGCGCGGTTCCCGGAGTTCCAAGTGCAGGTGCGGGGGGCTCCGCA
TGCCGTTCTTCACTGTAGTAGCCCCTTACTTCGATTCACACACACACCCA
AAATAAATACTATTTACCGTAGGTGACATAAGATAAGACACCCCCTGGAC
CGATTTTCAAAGCTCAAGTACTTCACAGCAAGCAGAGATTCAGTCCCGAA
AAGGGCGGCGTTAGAAAGATCTCGTGGAGAGCTTTCCGAAAATGTGGCGT
TTGTGGTTAGAATCGTATTCGTTGCGGAGTAACCAAGCTTTCAATATCGG
TCCAGGGGGTGTCTTATCTTATGTCACCTACGGTAGCCTGGAGCCTCGGT
CGGGGCCGTGCTGTACGCCGTGCTCGTTGCGCGGTTCCCGGAGTTGCAAG
CGCATGTGTGGGGGGCTCCGCATGCCTTTATTTTGGCGGTCTAACTTACG
TCCAACCTGCGAAAAAAAAGAAAAAAATCCGGGTGGGGGGGGAAGGGCTT
TTTGCACAGCAGCATTTGCAGTCATGTCTCCTGAACCGTCTTTGTCGACG
TTTTGTGAGAAGCGGGCACGCACACACACAGTAGCAGTGAGAGCTCACCG
CTGCGCTGCAGTAGATGCGCTCAGAAAATGCGCCTACTCTGTACTACTAT
AAAATTAGTGTAGAGCTTTTGGATACCCACCTACCGTAGGTGACACAAGA
TACCACACCCCCTGGACAGATTTTCAAAGCTCGACTCCTCCCCGGCGAGA
AGAATGACAGTGCCGAAAGGGATGTCGTTGGAAAGATCTAGTCGAGGGCT
GTCCGAAAATGTGTCGTTTGGTGCTGGCACCCTCTTCGTTACGGAGTACA
GTGTTGTTGGGGACGATTCCGCCGCACTTTTTCCGCACCGTCTTTTTTCG
ACAAAGCTACAGCAATAGGCCCCCGTTTCTGTTTGTAGAGGTGGGAATAG
AACCGTGTGTTGGTAGAGTACCACAAGCCGAAAAATTCCGGTTCGAGGGC
GGTTGTGTCGGCCGGCAGGAAAAATAGCGTTTTGGGATATAGGCCGGAGA
TACGGAGGCATTTCAGGTAGGCGGGGCCCAACACCTGTCAGCCCCGTAAA
AGTTTTGTACGTTTTGCCAGTCCACCACCTCACCTATGCTGCCTGTAAAG
CACGATATGTCGTTGGCTACCCAAAGTAACACTGCTAGGATGTTTTCTTG
TCGGTTGTCTGACTTTCGTGTGCGCGTTCCAGCTGTGATAAAAAAGACTC
CCGTCGAAACCTTGGTTGGTACAGACGGGCGACTTCGGGGACAAATTATC
ATCGCGCCCGGCCCTTGGGTCAGCAAGATAGCTTATCTTATTGGCTATCC
AAAGCCCCAAGCACATCCAGGGCTTAACATCTACCGGCCGAGAAATTCGC
GATGCTGCAAACCCTCTTGTGACTTGTTGAATGTATAGGCTGGGAGATTC
ACCGATGCCCCGCGTTGTGCTGGCTCTCTCTCCCCATTTTCACAGTCATG
TTCTCTCTCTCTTTCACCAGGCGATGTCGTTGGGCACTCTGATATTTCGG
GGACAAGCGTCTTCTACGAGCGGAAGTTTGGCTTTTTAGCATCTCTGTTA
TCTTAGCTACAGGATGTATCGAAGACTTTGTTGTCTTAATTTGATGGCGG
AGCTATCGTGGTGTTTGTCTGCCAGCTGCTCTGCCCGTATATATCCAAGT
GGTTTTGATCGGTTTCTCAAGGGGGCGCCAAAAACGTCATATTCCGCCGC
GGAATAAAAAAGGCGGCGGGGCCCCTCTCCCAATGACACTGAGTAGTGGA
GCTCTAAAAGTCGGTCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTAC
CCACCCACCCACCCTCTTTTGTCCCGCCGTTGATTTTGCTGCATCAATTT
TTTTTTATTACTTATAAATTGTGTTTGTGGCACATTTTTCGTTTCGTCTG
CCCCCCCTTGTCTCTCTTAGGGTGTGAGGAAGCACGTGCGCATGGTGGGC
CCCCTGTGGGACAGAGTGTCGGCGCCGGCGAAGGAGTTGATACGGGCCCT
GATGGCGTTCGACGCGGGGGCGAGGCTGACGGTCGACCAGGTATGTATGC
AT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10724:118..6319+

>mRNA_L-elsbetiae_contig10724.673.1 ID=mRNA_L-elsbetiae_contig10724.673.1|Name=mRNA_L-elsbetiae_contig10724.673.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1650bp|location=Sequence derived from alignment at L-elsbetiae_contig10724:118..6319+ (Laminarionema elsbetiae ELsaHSoW15)
TCCAGCCGCTACCAACTCCTGGAGCAGGTGGGCTCCGGGGCCTCGGGCAC
GGTGTGGAAGTGCTCCCTGGCGTCAGGACAGGGTGTCGGGGCGGAAGACG
ACCCGGTGCCGGGAAAGATCTACGCGGCCAAGATTATCGACCTGAGGCCT
TTCAAGCTCCGGGAGAGGTTCAGCATGCAGAGTCCAGCCGCTACCAACTC
CTGGAGCAGGTGGGCTCCGGGGCCTCGGGCACGGTGTGGAAGTGCTCCCT
GGCGTCAGGACAGGGTGTCGGGGCGGAAGACGACCCGGTGCCGGGAAAGA
TCTACGCGGCCAAGATTATCGACCTGAGGCCTTTCAAGCTCCGGGAGAGG
TTCAGCATGCAGAGGCTGATGCGGGAGGTGGACATCATGCAGCGATTGCG
CCACCCCAACATCATTCGACTCGTGGAAGCGCTTGACACGCCCGAACAGG
CTGATGCGGGAGGTGGACATCATGCAGCGATTGCGCCACCCCAACATCAT
TCGACTCGTGGAAGCGCTTGACACGCCCGAACAGCTGGTGCTCGTGCTGG
AGTACGCTCCCGGAGTGGAGCTGTTCGACGCCATCCTCTCCAAGACCAAG
TTCAGCGAAGAAGAGGCCCGCCCGGTCTTCCTGGTGCTCGTGCTGGAGTA
CGCTCCCGGAGTGGAGCTGTTCGACGCCATCCTCTCCAAGACCAAGTTCA
GCGAAGAAGAGGCCCGCCCGGTCTTCGTTGCGAGGGCTCTACAGTACATG
CACTCCAAGCAGATCGTGCACCGAGACGTGAAGCCCGAGAACGTCATGAT
CATCGACCGGCCCACAGAGGACGGTCTCTACCCGGAGGTTGCGAGGGCTC
TACAGTACATGCACTCCAAGCAGATCGTGCACCGAGACGTGAAGCCCGAG
AACGTCATGATCATCGACCGGCCCACAGAGGACGGTCTCTACCCGGAGGC
GAAGCTCCTAGACTTCGGCTTGTCCAAGGCGATAGACGCCGACACGGGGG
GCTCCGTGGCCCGCACCTTCGTGGGGACGCCCTCCTACTTGGCGCCGGAG
GTGGAGGAGAAGCGGGGGGGCAGGGGTAAGCCATACGGCACGCCGGTCGA
CTGCTGGAGCCTCGGGGCGATGCTGTACGTCATGCTCGTCGCGCGGTTCC
CGGAGTTCCAAGTGCAGGCGAAGCTCCTAGACTTCGGCTTGTCCAAGGCG
ATAGACGCCGACACGGGGGGCTCCGTGGCCCGCACCTTCGTGGGGACGCC
CTCCTACTTGGCGCCGGAGGTGGAGGAGAAGCGGGGGGGCAGGGGTAAGC
CATACGGCACGCCGGTCGACTGCTGGAGCCTCGGGGCGATGCTGTACGTC
ATGCTCGTCGCGCGGTTCCCGGAGTTCCAAGTGCAGGGTGTGAGGAAGCA
CGTGCGCATGGTGGGCCCCCTGTGGGACAGAGTGTCGGCGCCGGCGAAGG
AGTTGATACGGGCCCTGATGGCGTTCGACGCGGGGGCGAGGCTGACGGTC
GACCAGGTATGTATGCATGGTGTGAGGAAGCACGTGCGCATGGTGGGCCC
CCTGTGGGACAGAGTGTCGGCGCCGGCGAAGGAGTTGATACGGGCCCTGA
TGGCGTTCGACGCGGGGGCGAGGCTGACGGTCGACCAGGTATGTATGCAT
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