mRNA_L-elsbetiae_contig10710.666.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10710.666.1 vs. uniprot
Match: D8LRI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRI4_ECTSI) HSP 1 Score: 164 bits (414), Expect = 4.530e-45 Identity = 82/86 (95.35%), Postives = 84/86 (97.67%), Query Frame = 1 Query: 1 STVFPLFGRLRRDASVEHMAGEHKPPPILRPVELTLVPDSVSTFEDVANTLTRCSEVCTLLSNQRRVMKNTFFLRASLITHLVTRV 258 S VFPLFGRLRRDASVEH+AGEHKPPPILRPVELT+VPDSVSTFEDVANTLTRCSEVCTLLSNQR VMKNTFFLRASLITHLVTRV Sbjct: 760 SAVFPLFGRLRRDASVEHLAGEHKPPPILRPVELTVVPDSVSTFEDVANTLTRCSEVCTLLSNQRNVMKNTFFLRASLITHLVTRV 845
BLAST of mRNA_L-elsbetiae_contig10710.666.1 vs. uniprot
Match: W7TMJ4_9STRA (EF-Hand 1, calcium-binding site n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMJ4_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.230e-25 Identity = 52/86 (60.47%), Postives = 66/86 (76.74%), Query Frame = 1 Query: 1 STVFPLFGRLRRDASVEHMAGEHKPPPILRPVELTLVPDSVSTFEDVANTLTRCSEVCTLLSNQRRVMKNTFFLRASLITHLVTRV 258 + FPL+GRLRRDASVEH+ G+ + PPIL PV+LTLVP+ VSTF DV N L C ++CT++ NQ +MKNT+ R SLI HL+TRV Sbjct: 378 AACFPLWGRLRRDASVEHLIGQARVPPILLPVQLTLVPEKVSTFNDVTNALRHCVQLCTIMENQMYLMKNTYCHRISLIQHLITRV 463
BLAST of mRNA_L-elsbetiae_contig10710.666.1 vs. uniprot
Match: A0A835Z7Z7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z7_9STRA) HSP 1 Score: 103 bits (256), Expect = 9.570e-24 Identity = 54/88 (61.36%), Postives = 64/88 (72.73%), Query Frame = 1 Query: 1 STVFPLFGRLRRDASVEHMAGEHKPPPILRPVELTLVPDS--VSTFEDVANTLTRCSEVCTLLSNQRRVMKNTFFLRASLITHLVTRV 258 S V PLFGRLRRD V+H+AG PPI+RPVELT VPD + TFEDV L R VCTLL+NQR V+K+T+ LRA+L+ HL TRV Sbjct: 1346 SGVLPLFGRLRRDTGVDHLAGGSAVPPIVRPVELTSVPDKGELETFEDVGRALQRAVHVCTLLANQRDVLKSTYLLRATLLAHLFTRV 1433
BLAST of mRNA_L-elsbetiae_contig10710.666.1 vs. uniprot
Match: A0A2R5FYY4_9STRA (Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYY4_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.440e-23 Identity = 48/86 (55.81%), Postives = 63/86 (73.26%), Query Frame = 1 Query: 1 STVFPLFGRLRRDASVEHMAGEHKPPPILRPVELTLVPDSVSTFEDVANTLTRCSEVCTLLSNQRRVMKNTFFLRASLITHLVTRV 258 + P+FG RRD SVEH+AG PPPILRPV+LTLVPD++ F DVA TL C +CTLL NQ+ +++NT+ +R +LI HL T+V Sbjct: 723 AACMPMFGPFRRDCSVEHLAGGAAPPPILRPVQLTLVPDAIEDFADVAITLRHCVNICTLLDNQKDLIRNTYCIRIALIQHLFTQV 808
BLAST of mRNA_L-elsbetiae_contig10710.666.1 vs. uniprot
Match: A0A7S1XN75_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XN75_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.180e-20 Identity = 45/86 (52.33%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 1 STVFPLFGRLRRDASVEHMAGEHKPPPILRPVELTLVPDSVSTFEDVANTLTRCSEVCTLLSNQRRVMKNTFFLRASLITHLVTRV 258 ++ FPLFGR RRD VEH+ GE K PPI PVEL+L+PD V+ F++ A+ L +++CTLL NQ +KN+ LR +L+THL RV Sbjct: 468 ASCFPLFGRFRRDTEVEHLKGEAKVPPIQLPVELSLIPDRVTDFQEAAHALRHAAQLCTLLGNQAEHIKNSATLRCTLVTHLALRV 553
BLAST of mRNA_L-elsbetiae_contig10710.666.1 vs. uniprot
Match: A0A0L0DVD2_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DVD2_THETB) HSP 1 Score: 92.0 bits (227), Expect = 7.960e-20 Identity = 44/84 (52.38%), Postives = 63/84 (75.00%), Query Frame = 1 Query: 7 VFPLFGRLRRDASVEHMAGEHKPPPILRPVELTLVPDSVSTFEDVANTLTRCSEVCTLLSNQRRVMKNTFFLRASLITHLVTRV 258 +PLF R RD+SV+H+AGE PPPILRP++LTLVP++V+T ++ A L C V TLL+NQ ++KN++ +R +LI+ L TRV Sbjct: 491 AWPLFDRFVRDSSVDHLAGEPAPPPILRPMQLTLVPETVTTLDEAAQALRHCVSVSTLLANQASLVKNSYAVRVALISSLFTRV 574
BLAST of mRNA_L-elsbetiae_contig10710.666.1 vs. uniprot
Match: A0A7S3T2B5_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T2B5_EMIHU) HSP 1 Score: 87.8 bits (216), Expect = 2.050e-19 Identity = 44/83 (53.01%), Postives = 58/83 (69.88%), Query Frame = 1 Query: 10 FPLFGRLRRDASVEHMAGEHKPPPILRPVELTLVPDSVSTFEDVANTLTRCSEVCTLLSNQRRVMKNTFFLRASLITHLVTRV 258 F LFGR R SV+H+AGE PP++ PVEL+LVPD VS++EDV N L +C LL+NQ+ + NT+ LR SL+ HL+T V Sbjct: 91 FDLFGRALRGRSVDHLAGESALPPVVLPVELSLVPDCVSSYEDVCNALRHAVHLCELLANQQGYIPNTYCLRVSLLQHLLTAV 173
BLAST of mRNA_L-elsbetiae_contig10710.666.1 vs. uniprot
Match: A0A7S3JZH5_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZH5_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 7.040e-19 Identity = 42/84 (50.00%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 7 VFPLFGRLRRDASVEHMAGEHKPPPILRPVELTLVPDSVSTFEDVANTLTRCSEVCTLLSNQRRVMKNTFFLRASLITHLVTRV 258 VFPLFGR RRDA V+H+AG PPI PVEL+ VPD+++ + A L + VCTLL+NQ ++++T+ LR +L+ H++TRV Sbjct: 803 VFPLFGRFRRDADVDHLAGSAVVPPIQLPVELSSVPDAITDYHSAAIALRKALHVCTLLANQAHLIRHTYLLRCALLQHVLTRV 886
BLAST of mRNA_L-elsbetiae_contig10710.666.1 vs. uniprot
Match: A0A2D8PPP4_9PROT (PEROXIDASE_4 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PPP4_9PROT) HSP 1 Score: 88.2 bits (217), Expect = 1.460e-18 Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 10 FPLFGRLRRDASVEHMAGEHKPPPILRPVELTLVPDSVSTFEDVANTLTRCSEVCTLLSNQRRVMKNTFFLRASLITHLVTRV 258 FPLFGR RRD V +AG PPI PVEL++VPD++ ++E AN L R S+VC+LL+NQ ++++T+ +R +L+ H +TRV Sbjct: 176 FPLFGRFRRDTDVSSLAGAALIPPITLPVELSMVPDTIDSYESAANLLRRTSDVCSLLANQAHLIRHTYLMRFALLMHTLTRV 258
BLAST of mRNA_L-elsbetiae_contig10710.666.1 vs. uniprot
Match: F0YGN6_AURAN (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=F0YGN6_AURAN) HSP 1 Score: 88.2 bits (217), Expect = 1.790e-18 Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 10 FPLFGRLRRDASVEHMAGEHKPPPILRPVELTLVPDSVSTFEDVANTLTRCSEVCTLLSNQRRVMKNTFFLRASLITHLVTRV 258 FPLFGR RRD V +AG PPI PVEL++VPD++ ++E AN L R S+VC+LL+NQ ++++T+ +R +L+ H +TRV Sbjct: 561 FPLFGRFRRDTDVSSLAGAALIPPITLPVELSMVPDTIDSYESAANLLRRTSDVCSLLANQAHLIRHTYLMRFALLMHTLTRV 643 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10710.666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10710.666.1 >prot_L-elsbetiae_contig10710.666.1 ID=prot_L-elsbetiae_contig10710.666.1|Name=mRNA_L-elsbetiae_contig10710.666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=86bp STVFPLFGRLRRDASVEHMAGEHKPPPILRPVELTLVPDSVSTFEDVANTback to top mRNA from alignment at L-elsbetiae_contig10710:758..1632- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10710.666.1 ID=mRNA_L-elsbetiae_contig10710.666.1|Name=mRNA_L-elsbetiae_contig10710.666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=875bp|location=Sequence derived from alignment at L-elsbetiae_contig10710:758..1632- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10710:758..1632- >mRNA_L-elsbetiae_contig10710.666.1 ID=mRNA_L-elsbetiae_contig10710.666.1|Name=mRNA_L-elsbetiae_contig10710.666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=516bp|location=Sequence derived from alignment at L-elsbetiae_contig10710:758..1632- (Laminarionema elsbetiae ELsaHSoW15)back to top |