mRNA_L-elsbetiae_contig1071.665.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1071.665.1 vs. uniprot
Match: D7G5A5_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5A5_ECTSI) HSP 1 Score: 1140 bits (2949), Expect = 0.000e+0 Identity = 659/1116 (59.05%), Postives = 750/1116 (67.20%), Query Frame = 1
Query: 91 MDMTQRKIRLRQMAALCRAANTHTTEDVAELRGVLDHIAAEKERTTRLFSPRAFTTCSKQAARTYGEFVCTLEGSASRGKGEVLMLTRDSDLGKITAFLREAFHLEAGGVLVTVPEDRLFDEMEQLVLSTKHLHGLLDDFVLRQPARRVLKVMKAALPITRCLVGGSNGRNDADSEGATALALNQLLELVQIPANLETLNGAGHLTDLLVAMGSVIGHSACLEHVVVACQVVWKLAASDGMRRRMFEHGVQKKLWALAENIARTVETPEHRKSRQKTAEAALEAAASTDGSPTSVRGKREPS-----LQELTV--EDEAILSEGGHEQGDGASLTLEAGQELDELAAKCVGAISLMLRSQETADALVGTK--HHGLEILLELATVTQGSDGIGDEQVPCLAAEALAHVLISYGACRMAWAERGQFISLLDLMRSPLGRVVLCGTSILNAFFRGEPSHIAVTPIEAVAVLKETSLACQRCLDRLLGSGAPPTQPEPEHASDGGRAGVKT-AGSSLPIYARMDADTLECLGILEQGTAACWGSLAVIDRCPPGSAKQEISLSCWFPTMLAVAKLSGTNWLSPWVIFCAVACIGVGVGTGASSGSFDVPEVSGLFYGT---YILPMVPFV-----YDPEIFRAG-------SHQMEALPGEMLALLKRTNSLELQEHAARTLCTLLSANKGLRQKALQDGFLDKLQRLLMGHLGSPQLDSTIACSIMFLCDACTVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKGTKETNTPDWGIWSQKQLTSLVWALGHSNQDVLTYTAWTVWLLARRPENRVSLGRLWAIDGLIHALRSNARLDVKGGLLAASWLLACDAENTTRLAMNGGLHLLVGVLNFPCSPCYVSLKALAVGTLCKLCRTEPDVATLAMHLSLAPALLQAVYDDTSTVYFKVLCAGLVFTLCRNAEHEASRADYVKQFAIEGGPFILEEICAGFLASGTSELQACGSFFAASLSLGPRSRHRLHDNGGLEALCRLARASNTKEPLKIRSLHALLNLSTERGCQPSICKWALQALVEMTVSGVPPQAEFASSILSNCAENPHCRAIMFEGQV 3363
M M QRK RL QMAALCR A+ T +D+AELRG+LDHIAAEKER LFSPRA CS+QAARTYGEFVCTLEGSAS+G+GEV+MLTRDSD G+I+ FL+EAF+L GGVL+T+PEDRLFDEMEQLVLSTKHL GL+DDFVLRQP RRVLKVMKA PITRCLVGGS+G D D++ A +ALNQLLELVQ+PANLET++ AG L++LLVA+GSVIGHS+ V VACQVVWKLA S MRRRM EHG+Q KLWALAE+IARTVETPEHRK+RQK V G R LQE+T EDEA S G E+G G ++ LEAGQE+DE+AAKCVGAISLMLRSQE AD+L G++ H+GLEILLELAT Q GI DE VPC+AAEALAHVLIS+G CR+AWAE+G F+SLLDLMRSPL RVVLC SILNAF RGEPS IAVTP EA+ VL++ S ACQRCLD+L + P +P+ + +G + AG P++ MDA+T + +GILEQ TAACWGSLAVIDRCPPG K+ +S +CWF TML+VAKL+G+ WLSPWV+FCAVACIGVG AS + EV T Y+ P Y P F G MEALPGEMLALLKRTNSLELQEHAARTLCTL+SAN+ LR+KA +DGFLDKLQRLLM LGS Q DSTIACSIM+LCD +G XXXXXXX D +WS+KQLTSLVWALGH+NQDVLTYTAWT+ LDVK G+LAA WLLACD +NT RLAMNGGL LLVG+LNFP S CYV LK+LAVGTLC +C TEPDVATLAMHLSLA ALLQA CGSF AASLSLG RSR RL DNGG+EALCRL RA++TKEPLK+RSLHALLN STE GCQPSIC+WALQ LVE+TVS PPQ+EFASSIL NCAENP CRAIMFEGQ+
Sbjct: 1 MGMKQRKARLGQMAALCRLASKGTDQDIAELRGILDHIAAEKERDAGLFSPRASVACSRQAARTYGEFVCTLEGSASKGQGEVIMLTRDSDFGRISGFLQEAFNL-TGGVLITLPEDRLFDEMEQLVLSTKHLQGLIDDFVLRQPPRRVLKVMKATFPITRCLVGGSHG--DLDADEAIVVALNQLLELVQVPANLETVDRAGRLSELLVAVGSVIGHSSSSVQVAVACQVVWKLATSTDMRRRMLEHGLQNKLWALAESIARTVETPEHRKARQKAXXXXXXXXXXXXXXXXXVDGSRGGEGGPLLLQEVTGGNEDEAHTS--GGEEGGGVAVVLEAGQEMDEVAAKCVGAISLMLRSQEAADSLSGSEGYHNGLEILLELATAGQRRGGIEDESVPCMAAEALAHVLISHGTCRLAWAEQGSFLSLLDLMRSPLSRVVLCCVSILNAFLRGEPSQIAVTPAEAIKVLEQASPACQRCLDQLESTMLPV---DPKSTAAATASGTRALAGVCSPLHQSMDAETQDSMGILEQATAACWGSLAVIDRCPPGPGKKAVSSACWFRTMLSVAKLAGSKWLSPWVVFCAVACIGVGXXXXASVDTDSSEEVGNSISATSLYYVHESSPREEGEKRYIPTDFSRGVWNLDTSEAMMEALPGEMLALLKRTNSLELQEHAARTLCTLMSANENLRRKAFEDGFLDKLQRLLMRRLGSAQFDSTIACSIMYLCD---IGAQSKSSDNSNTKTENGNNDNKTVSAKQENSIGDVVENAGLAEGSSKPKRQXXXXXXXXXXXXXXXX-DGALWSEKQLTSLVWALGHTNQDVLTYTAWTI-------------------------------LDVKEGVLAAIWLLACDTDNTVRLAMNGGLQLLVGILNFPSSACYVPLKSLAVGTLCNMCHTEPDVATLAMHLSLASALLQA----------------------------------------------------------------CGSFLAASLSLGARSRSRLQDNGGVEALCRLVRATSTKEPLKVRSLHALLNFSTETGCQPSICRWALQPLVELTVSSAPPQSEFASSILCNCAENPCCRAIMFEGQI 1009
BLAST of mRNA_L-elsbetiae_contig1071.665.1 vs. uniprot
Match: A0A6H5LAC6_9PHAE (Vacuolar protein 8 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAC6_9PHAE) HSP 1 Score: 955 bits (2468), Expect = 0.000e+0 Identity = 558/1027 (54.33%), Postives = 643/1027 (62.61%), Query Frame = 1
Query: 313 SASRGKGEVLMLTRDSDLGKITAFLREAFHLEAGGVLVTVPEDRLFDEMEQLVLSTKHLHGLLDDFVLRQPARRVLKVMKAALPITRCLVGGSNGRNDADSEGATALALNQLLELVQIPANLETLNGAGHLTDLLVAMGSVIGHSACLEHVVVACQVVWKLAASDGMRRRMFEHGVQKKLWALAENIARTVETPEHRKSRQKTAEAALEA----AASTDGSPTSVRGKREPSL-QELTV--EDEAILSEGGHEQGDGASLTLEAGQELDELAAKCVGAISLMLRSQETADALVGTK--HHGLEILLELATVTQGSDGIGDEQVPCLAAEALAHVLISYGACRMAWAERGQFISLLDLMRSPLGRVVLCGTSILNAFFRGEPSHIAVTPIEAVAVLKETSLACQRCLDRLLGSGAPPTQPEPEHASDGGRAGVKT-AGSSLPIYARMDADTLECLGILEQGTAACWGSLAVIDRCPPGSAKQEISLSCWFPTMLAVAKLSGTNWLSPWVIFCAVACIGVGVGTGASSGSFDVPEVSGLFYGTYILPMVPFVYDPEIFRAGSHQMEALPGEMLALLKRTNSLELQEHAARTLCTLLSANKGLRQKALQDGFLDKLQRLLMGHLGSPQLDSTIACSIMFLCDACTVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKGTKETNTPDWGIWSQKQLTSLVWALGHSNQDVLTYTAWTVWLLARRPENRVSLGRLWAIDGLIHALRSNARLDVKGGLLAASWLLACDAENTTRLAMNGGLHLLVGVLNFPCSPCYVSLKALAVGTLCKLCRTEPDVATLAMHLSLAPALLQAVYDDTSTVYFKVLCAGLVFTLCRNAEHEASRADYVKQFAIEGGPFILEEICAGFLASGTSELQACGSFFAASLSLGPRSRHRLHDNGGLEALCRLARASNTKEPLKIRSLHALLNLSTERGCQPSICKWALQALVEMTVSGVPPQAEFASSILSNCAENPHCRAIMFEGQV 3363
SAS+G+GEV+MLTRDSD G+I+ FLREAF+L GGVL+T+PEDRLFDEMEQLVLSTKHL GL+D FVLRQ RRVLK KLWALAE+IARTVETPE+RK+RQK + G+ S G+ P L QE+T EDEA SEG E+G G ++ LEAGQELDE+AAKC+GAISLMLRSQE AD+L G++ H+GLEILLELAT Q GI DE VPC+AAEALAHVLIS+G CR+AWAE+G F+SLLDLMRSPL RVVLC SILN+F RGEPS IAVTP EA+ VL++ + ACQRCLD+L P +P+ + +G + AG P++ RCPPG K+ IS +CWF TML+VAKL+G+ WLSPWV+FCAVACIGV AS + EV G R G +EHAARTLCTLLSAN+ LR+KA +DGFLDKLQRLLM LGS Q DSTIACSIM+LCD +G D +WS+KQLTSLVWALGH+NQDVLTYTAWT+WLLARR +NRVSLGRLWA+DGL+H LRSNARLDVK G+LAA WLLACD +NT RLAMNGGL LLVG+LNFP S CYV LK+LAVGTLCKLC TEPDVA LAMHLS+A ALL+AVYD TSTVY KVL AGL+FTLCRN EH+ +RADYVKQFA EGGPF+LE++CAGFLASGTSELQACGSF AASLSL RSR+RLHDNGG+EALCRL RA++TKEPL++RSLHALLNLSTE GCQPSIC+WALQ LVE+T S PPQ+EFASSILSNCAENP CRAIMFEGQ+
Sbjct: 6 SASKGQGEVIMLTRDSDFGRISGFLREAFNL-TGGVLITLPEDRLFDEMEQLVLSTKHLQGLIDAFVLRQSPRRVLK----------------------------------------------------------------------------------------------------NKLWALAESIARTVETPENRKARQKXXXXXXXXXXXXTGGSRGADDSRGGEGVPLLLQEVTGDNEDEAHTSEG--EEGGGVAVVLEAGQELDEVAAKCLGAISLMLRSQEAADSLAGSEGYHNGLEILLELATAGQRGGGIEDESVPCMAAEALAHVLISHGTCRLAWAEQGSFLSLLDLMRSPLSRVVLCCVSILNSFLRGEPSQIAVTPAEAIKVLEQAAPACQRCLDQLESKMLPI---DPKSTAAATASGTRALAGVCPPLH----------------------------QRCPPGPEKKAISSACWFSTMLSVAKLAGSKWLSPWVVFCAVACIGVXXXXXASVDTDSNKEVVG--------------------RQGP----------------------EEHAARTLCTLLSANENLRRKAFEDGFLDKLQRLLMRRLGSAQFDSTIACSIMYLCD---IGAQSKSSDNSNTKTEKGNNLNKTASAKQEDSIGDAVEHAGLAEGSSKPKGQRRATRSAXXXXXXXXA-DGAVWSEKQLTSLVWALGHTNQDVLTYTAWTIWLLARRRKNRVSLGRLWALDGLVHVLRSNARLDVKEGVLAAIWLLACDTDNTVRLAMNGGLQLLVGILNFPSSACYVPLKSLAVGTLCKLCHTEPDVAMLAMHLSIASALLRAVYDCTSTVYLKVLSAGLMFTLCRNPEHKKNRADYVKQFATEGGPFVLEDVCAGFLASGTSELQACGSFLAASLSLRARSRNRLHDNGGMEALCRLVRATSTKEPLRVRSLHALLNLSTETGCQPSICRWALQPLVELTGSSAPPQSEFASSILSNCAENPCCRAIMFEGQI 852 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1071.665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1071.665.1 >prot_L-elsbetiae_contig1071.665.1 ID=prot_L-elsbetiae_contig1071.665.1|Name=mRNA_L-elsbetiae_contig1071.665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1121bp QTHSCKPAQRTQLCSRPTPGLSVKDGTRHEMDMTQRKIRLRQMAALCRAAback to top mRNA from alignment at L-elsbetiae_contig1071:15777..29174+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1071.665.1 ID=mRNA_L-elsbetiae_contig1071.665.1|Name=mRNA_L-elsbetiae_contig1071.665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=13398bp|location=Sequence derived from alignment at L-elsbetiae_contig1071:15777..29174+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1071:15777..29174+ >mRNA_L-elsbetiae_contig1071.665.1 ID=mRNA_L-elsbetiae_contig1071.665.1|Name=mRNA_L-elsbetiae_contig1071.665.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=6726bp|location=Sequence derived from alignment at L-elsbetiae_contig1071:15777..29174+ (Laminarionema elsbetiae ELsaHSoW15)back to top |