mRNA_L-elsbetiae_contig107.657.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig107.657.1 vs. uniprot
Match: D8LNP3_ECTSI (ARL2_Bind_BART domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP3_ECTSI) HSP 1 Score: 287 bits (734), Expect = 1.030e-94 Identity = 158/191 (82.72%), Postives = 166/191 (86.91%), Query Frame = 3 Query: 150 MPKRDMSDEEGEGKDGEGRGAEGDLLARAIKHCWSDNFLDVFRAYFRKHADVFEVMAEGKSEEHALEYQELFNEYLLMFEGKLEEFIAREGSTINEFYTVIRDHQSNPDPQVQLFINCLLASADYDSFFNVMKKEAEKSLRKKRQLGQESKPAAG-EGKESEPPAPSGAPSTGEGKDSGDGR-HSDERSYK 716 MPKRD +EGE K G+G G E DLLA+AIKHCWSDNFLDVFRAYFRKHA+VFEVMA+GKSEEHALEYQELFNEYLL+FEGKLEEFI REGSTINEFY VIRDHQ+NPDPQVQLFINCLLASADYDSFFNVMKKEAEKSLRKKR LGQESKP AG EGKE + G PSTGEGK S D R HS ERSYK Sbjct: 1 MPKRDSHGDEGESK-GQGGGEE-DLLAKAIKHCWSDNFLDVFRAYFRKHAEVFEVMADGKSEEHALEYQELFNEYLLIFEGKLEEFIEREGSTINEFYNVIRDHQTNPDPQVQLFINCLLASADYDSFFNVMKKEAEKSLRKKRHLGQESKPTAGSEGKEPDSVPRGGVPSTGEGKYSEDDRRHSGERSYK 189
BLAST of mRNA_L-elsbetiae_contig107.657.1 vs. uniprot
Match: A0A835ZDD4_9STRA (ARL2_Bind_BART domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDD4_9STRA) HSP 1 Score: 168 bits (425), Expect = 3.590e-48 Identity = 93/151 (61.59%), Postives = 108/151 (71.52%), Query Frame = 3 Query: 180 GEGKDGEGRGAEGDLLARAIKHCWSDNFLDVFRAYFRKHADVFEVMAEGKSEEHALEYQELFNEYLLMFEGKLEEFIAREGSTINEFYTVIRDHQSNPDPQVQLFINCLLASADYDSFFNVMKKEAEKSLRKKRQLGQESKPAAGEGKESE 632 GE K G E LL RAIK+CWS+NFLDVFRAYFRKHA FE +AE K+EEH L +QELF EYL +FEG LE+FI REG+T +FY IRD QS+ DP +QLFI CLLASADYDSFFNVM KE+ +RQL + GEGK +E Sbjct: 4 GEEKSSSNGGEEKGLLQRAIKYCWSNNFLDVFRAYFRKHAHHFERIAEEKTEEHDLVFQELFQEYLGIFEGTLEDFIEREGATQEQFYAAIRDAQSSTDPSIQLFIRCLLASADYDSFFNVMVKES------RRQLDAQGADEWGEGKAAE 148
BLAST of mRNA_L-elsbetiae_contig107.657.1 vs. uniprot
Match: A0A7R9YCX8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCX8_9STRA) HSP 1 Score: 120 bits (302), Expect = 9.220e-30 Identity = 71/163 (43.56%), Postives = 99/163 (60.74%), Query Frame = 3 Query: 102 DAVLVGRSGRRILGVVMPKRDMSDEEGEGKDGEGRGAEGDLLARAIKHCWSDNFLDVFRAYFRKHADVFEVMAEGKSEEHALEYQELFNEYLLMFEGKLEEFIAREGSTINEFYTVIRDHQSNP-DPQVQLFINCLLASADYDSFFNVMKKEAEKSLRKKRQL 587 DA R + LG + + D DEE KD + A L+ +A+ +CWS +FLDVFR+YFRKHA VF AEGK+EEH LE+QELF EYL ++E LE+F+ ++ + Y + Q P V +F++CLLAS DY+SF VM +EA + R+ R + Sbjct: 22 DAARGFRMSKEELGKLEDELD--DEEM--KDSQEACAVTPLIRKAMAYCWSSSFLDVFRSYFRKHAGVFSDFAEGKTEEHDLEFQELFREYLDLYESTLEDFLRDADASSQDLYRDVAALQGTKMAPDVAIFVDCLLASMDYESFLKVMTREARQQSRQARSI 180
BLAST of mRNA_L-elsbetiae_contig107.657.1 vs. uniprot
Match: A0A7S2UYU1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYU1_9STRA) HSP 1 Score: 119 bits (299), Expect = 3.080e-29 Identity = 66/149 (44.30%), Postives = 92/149 (61.74%), Query Frame = 3 Query: 144 VVMPKRDMSDEEGEGKDGEGRGA------EGDLLARAIKHCWSDNFLDVFRAYFRKHADVFEVMAEGKSEEHALEYQELFNEYLLMFEGKLEEFIAREGSTINEFYT-VIRDHQSNPDPQVQLFINCLLASADYDSFFNVMKKEAEKSL 569 V M K+D SD + E K +G EG L + +K+CW + FLDVFR YF++HA F AEG++EEH L +QELF +YL ++E L +F+ +EG + EFY V ++ DP + FI+CLLAS DY+SFF VM + A+ L Sbjct: 30 VTMKKQDDSDYKSESKGAKGXXXXXXXXXEGGALEKVMKYCWDNEFLDVFRNYFKEHAYHFTEYAEGRTEEHDLAWQELFEDYLKLYEDTLSDFLRQEGYSDKEFYAEVAAAKETATDPATKQFIHCLLASCDYNSFFRVMVQMAKTEL 178
BLAST of mRNA_L-elsbetiae_contig107.657.1 vs. uniprot
Match: A0A7S2AWK6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AWK6_9STRA) HSP 1 Score: 102 bits (255), Expect = 5.720e-23 Identity = 57/123 (46.34%), Postives = 77/123 (62.60%), Query Frame = 3 Query: 222 LLARAIKHCWSDNFLDVFRAYFRKHADVFEVMAEGK-SEEHALEYQELFNEYLLMFEGKLEEFIARE-GSTINEFYTVIRDHQS-------NPDPQVQLFINCLLASADYDSFFNVMKKEAEK 563 LL++A+ +CWS+ FLDVFR YFR HA F M G S EH+LE +F EYL ++E +L E+I + G + EFY + D + + D LFI CL+ASADYDSF+ VM +EA+K Sbjct: 27 LLSQALTYCWSNEFLDVFRQYFRDHASDFRGMKVGMGSSEHSLEQHAVFQEYLQLYEDRLSEYIESQLGGSSKEFYEELADAKDVQARDPESCDAGTALFIECLVASADYDSFYKVMVREAQK 149
BLAST of mRNA_L-elsbetiae_contig107.657.1 vs. uniprot
Match: A0A7S2HVG4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HVG4_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.260e-17 Identity = 50/128 (39.06%), Postives = 75/128 (58.59%), Query Frame = 3 Query: 222 LLARAIKHCWSDNFLDVFRAYFRKHADVFEVMAEGK---------SEEHALEYQELFNEYLLMFEGKLEEFIARE----GSTINEFYTVIRDHQSNP--DPQVQLFINCLLASADYDSFFNVMKKEAE 560 +L A+KHCW++NFL VFR +F+ HA F M + H+ + E F EYL ++E +L ++I G+T+ EFY ++ Q D Q+FI+CL+ASADYDSF++VM +EA+ Sbjct: 34 ILESALKHCWTNNFLGVFRQFFKDHAAHFRGMKRKDPLTGEWSLDTGTHSHQQHEDFEEYLKLYESQLADYIENHPDGPGATVTEFYRELKAAQECDFADEGTQMFIDCLVASADYDSFYSVMVREAD 161
BLAST of mRNA_L-elsbetiae_contig107.657.1 vs. uniprot
Match: A0A7S0ST95_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0ST95_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 3.050e-13 Identity = 40/111 (36.04%), Postives = 62/111 (55.86%), Query Frame = 3 Query: 240 KHCWSDNFLDVFRAYFRKHADVFEVMAEGKSEEHALEYQELFNEYLLMFEGKLEEFIAREGSTINEFYTVIRDHQSNP---DPQVQLFINCLLASADYDSFFNVMKKEAEK 563 +HCWS+NF++ F+ + H +F SEE LEY ELF YL ++E L ++I T+ EFY + D ++ D ++ F+N L+A DY SF+ +M + A K Sbjct: 1 RHCWSNNFMNSFKDFINDHCILFINAPTTPSEEQNLEYYELFQRYLKLYETILSDYINSLDCTVEEFYEQLADILNDTNIKDKKLLHFVNYLIACTDYPSFYKIMTRAARK 111
BLAST of mRNA_L-elsbetiae_contig107.657.1 vs. uniprot
Match: A0A0P1A8G8_PLAHL (Cilia- and flagella-associated protein 36 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8G8_PLAHL) HSP 1 Score: 73.9 bits (180), Expect = 2.430e-12 Identity = 49/156 (31.41%), Postives = 86/156 (55.13%), Query Frame = 3 Query: 129 RRILGVVMPKRDMSDEEGEGKDGEGRGAE---GDLLARAIKHCW-SDNFLDVFRAYFRKHADVFEVMAEGKSEEHALEYQELFNEYLLMFEGKLEEFIAREGSTINEFYTVIRD-HQSNPDPQVQLFINCLLASADYDSFFNVMKKEAEKSLRKKR 581 R I K E+ KD + AE DL+ + I + + +D+F F + +H VF++ S+E LEY +++N++L +FE KLE +I +G+T++EFY ++R ++ + + L L+A+AD+D F +M++ E SL +KR Sbjct: 15 RHIRAFSEAKSYAGHEKASAKDDDESSAEIPESDLVDKVITYFFENDDFAHSFETFAERHCHVFDL----NSDEMKLEYTDIYNKFLALFETKLEAYIQSQGATVHEFYNLVRHAYKVDRESGTVLCSEILVATADFDVFVQMMRQTKETSLLRKR 166
BLAST of mRNA_L-elsbetiae_contig107.657.1 vs. uniprot
Match: A0A024U863_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U863_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 3.130e-12 Identity = 36/104 (34.62%), Postives = 66/104 (63.46%), Query Frame = 3 Query: 252 SDNFLDVFRAYFRKHADVFEVMAEGKSEEHALEYQELFNEYLLMFEGKLEEFIAREGSTINEFYTVIRD-HQSNPDPQVQLFINCLLASADYDSFFNVMKKEAE 560 +++F VF + KH D+F+V KS+E LEY +++ ++ +FE K+E FI +GST+++FYT+++ H +P + ++ L+A+ D+D F +MK+ E Sbjct: 68 NEDFCRVFERFADKHCDIFDV----KSDEMQLEYTDIYKKFTDLFESKIEAFIESQGSTVDDFYTLVKKAHDKDPHGTIAIYSRMLVATTDFDVFVIMMKQAKE 167
BLAST of mRNA_L-elsbetiae_contig107.657.1 vs. uniprot
Match: A0A067CE96_SAPPC (Cilia- and flagella-associated protein 36 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CE96_SAPPC) HSP 1 Score: 72.4 bits (176), Expect = 7.230e-12 Identity = 38/110 (34.55%), Postives = 66/110 (60.00%), Query Frame = 3 Query: 252 SDNFLDVFRAYFRKHADVFEVMAEGKSEEHALEYQELFNEYLLMFEGKLEEFIAREGSTINEFYTVIRD-HQSNPDPQVQLFINCLLASADYDSFFNVMKKEAEKSLRKK 578 +D F F + KH D+F+ A+ E LEY +++N++ +FE K+EEFI +GS++ EFY ++R H+ +P + ++ L+A++D+D F +MK+ E KK Sbjct: 52 NDEFCATFERFADKHCDIFDPDAD----EMQLEYTDVYNQFTKLFETKIEEFIESQGSSVAEFYDLVRKAHEKDPHGTIAIYSRMLVATSDFDVFVLMMKQTKEAQRLKK 157 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig107.657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig107.657.1 >prot_L-elsbetiae_contig107.657.1 ID=prot_L-elsbetiae_contig107.657.1|Name=mRNA_L-elsbetiae_contig107.657.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=190bp MPKRDMSDEEGEGKDGEGRGAEGDLLARAIKHCWSDNFLDVFRAYFRKHAback to top mRNA from alignment at L-elsbetiae_contig107:31466..33704- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig107.657.1 ID=mRNA_L-elsbetiae_contig107.657.1|Name=mRNA_L-elsbetiae_contig107.657.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2239bp|location=Sequence derived from alignment at L-elsbetiae_contig107:31466..33704- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig107:31466..33704- >mRNA_L-elsbetiae_contig107.657.1 ID=mRNA_L-elsbetiae_contig107.657.1|Name=mRNA_L-elsbetiae_contig107.657.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1140bp|location=Sequence derived from alignment at L-elsbetiae_contig107:31466..33704- (Laminarionema elsbetiae ELsaHSoW15)back to top |