mRNA_L-elsbetiae_contig10693.650.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10693.650.1 vs. uniprot
Match: D7G6C8_ECTSI (L51_S25_CI-B8 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C8_ECTSI) HSP 1 Score: 201 bits (510), Expect = 2.250e-60 Identity = 97/112 (86.61%), Postives = 105/112 (93.75%), Query Frame = 1 Query: 1 MAWRASLSRNVRELRFCCCNVSQTGAPVREFFRSNYAELKTLNPSFPILLREGTGADPYLLATYDYGVEHRLPLNGLSQEDIAKEVEKAVEKGASLPTSPTQPAFRSANIEA 336 MAWRASLSRNVRELRFCCCN+SQ+GAPVREFFR+NYAELK LNP FPILLREGTGADPYLLATYDYGVEHRL L+GLSQE+IAKEVEKAVEKG+SLP SP QP+FRSA+ A Sbjct: 1 MAWRASLSRNVRELRFCCCNISQSGAPVREFFRTNYAELKALNPGFPILLREGTGADPYLLATYDYGVEHRLSLSGLSQENIAKEVEKAVEKGSSLPLSPMQPSFRSASAGA 112
BLAST of mRNA_L-elsbetiae_contig10693.650.1 vs. uniprot
Match: A0A0D6R4M3_ARACU (L51_S25_CI-B8 domain-containing protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R4M3_ARACU) HSP 1 Score: 108 bits (269), Expect = 4.380e-25 Identity = 51/99 (51.52%), Postives = 70/99 (70.71%), Query Frame = 1 Query: 1 MAWRASLSRNVRELRFCCCNVSQTGAPVREFFRSNYAELKTLNPSFPILLREGTGADPYLLATYDYGVEHRLPLNGLSQEDIAKEVEKAVEKGASLPTS 297 MAWRA LSRN++ELR C VS + A R+F RSNY +LKTLNP FPIL+RE +G +P + A Y YG+E + L+GL++ I K+VE+ V+ G ++ S Sbjct: 1 MAWRAQLSRNLKELRIHLCQVSPSSAATRDFIRSNYKDLKTLNPKFPILIRECSGIEPRIWARYQYGIEKSVALDGLTEGQITKKVEELVKDGVNISAS 99
BLAST of mRNA_L-elsbetiae_contig10693.650.1 vs. uniprot
Match: A0A3S3MVY3_9MAGN (NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 2 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3MVY3_9MAGN) HSP 1 Score: 105 bits (261), Expect = 5.390e-24 Identity = 50/96 (52.08%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 1 MAWRASLSRNVRELRFCCCNVSQTGAPVREFFRSNYAELKTLNPSFPILLREGTGADPYLLATYDYGVEHRLPLNGLSQEDIAKEVEKAVEKGASL 288 MAWR LSRN++ELRF C S A REF NY +LKTLNP FPIL+RE +G DP + A YD GVE + L+GL++ I++++E+ V+ GA+L Sbjct: 1 MAWRGHLSRNLKELRFLFCQTSPASAQAREFVHRNYKDLKTLNPKFPILIRECSGVDPQIWARYDMGVERCVHLDGLTEAQISRKLEELVKAGAAL 96
BLAST of mRNA_L-elsbetiae_contig10693.650.1 vs. uniprot
Match: UPI001CC74C30 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 n=2 Tax=Proteaceae TaxID=4328 RepID=UPI001CC74C30) HSP 1 Score: 103 bits (258), Expect = 1.440e-23 Identity = 50/96 (52.08%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 1 MAWRASLSRNVRELRFCCCNVSQTGAPVREFFRSNYAELKTLNPSFPILLREGTGADPYLLATYDYGVEHRLPLNGLSQEDIAKEVEKAVEKGASL 288 MAWR LSRN++E+RF C S + REF + NY +LKTLNP FPIL+RE G P L A YD GVE +PL GL++ I K ++ V+ GASL Sbjct: 1 MAWRGHLSRNLKEIRFLFCQTSPASSQTREFVQRNYKDLKTLNPKFPILIRECNGVQPQLWARYDMGVERGIPLEGLTEAQINKALQDLVQLGASL 96
BLAST of mRNA_L-elsbetiae_contig10693.650.1 vs. uniprot
Match: W1PFD0_AMBTC (L51_S25_CI-B8 domain-containing protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PFD0_AMBTC) HSP 1 Score: 103 bits (257), Expect = 2.000e-23 Identity = 50/96 (52.08%), Postives = 66/96 (68.75%), Query Frame = 1 Query: 1 MAWRASLSRNVRELRFCCCNVSQTGAPVREFFRSNYAELKTLNPSFPILLREGTGADPYLLATYDYGVEHRLPLNGLSQEDIAKEVEKAVEKGASL 288 MAWR LSRN++ELR C S A REF + NY +LKTLNP+FPIL+RE +G +P L A YD+GVE + L GL++ I K++E+ V+ GA L Sbjct: 1 MAWRGHLSRNLKELRVLFCQTSPASASTREFVQRNYTDLKTLNPTFPILVRECSGVEPQLWARYDFGVERCVRLEGLTETQITKKLEELVKVGAGL 96
BLAST of mRNA_L-elsbetiae_contig10693.650.1 vs. uniprot
Match: A0A5J5APT5_9ASTE (L51_S25_CI-B8 domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5APT5_9ASTE) HSP 1 Score: 103 bits (256), Expect = 2.770e-23 Identity = 50/96 (52.08%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 1 MAWRASLSRNVRELRFCCCNVSQTGAPVREFFRSNYAELKTLNPSFPILLREGTGADPYLLATYDYGVEHRLPLNGLSQEDIAKEVEKAVEKGASL 288 MAWR LSRN++ELR C C S + R F NY +LKTLNP FPIL+RE G +P L A YD GVE + L GL++ I+K VE+ V+ GA+L Sbjct: 1 MAWRGHLSRNLKELRICFCQTSPASSSARAFIERNYKDLKTLNPKFPILIRECNGIEPQLWARYDMGVERGIRLEGLTEVQISKAVEELVKVGATL 96
BLAST of mRNA_L-elsbetiae_contig10693.650.1 vs. uniprot
Match: A9NSY8_PICSI (L51_S25_CI-B8 domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NSY8_PICSI) HSP 1 Score: 100 bits (249), Expect = 3.050e-22 Identity = 48/96 (50.00%), Postives = 66/96 (68.75%), Query Frame = 1 Query: 1 MAWRASLSRNVRELRFCCCNVSQTGAPVREFFRSNYAELKTLNPSFPILLREGTGADPYLLATYDYGVEHRLPLNGLSQEDIAKEVEKAVEKGASL 288 MAWRA LSR ++ELR C S + A R+F SNY +LKTLNPSFPIL+RE +G +P + A Y YGVE + L+GL+ + I ++V++ V GA + Sbjct: 1 MAWRAQLSRYLKELRIHLCQTSPSSASTRDFILSNYTDLKTLNPSFPILIRECSGIEPRIWARYQYGVEKSVALDGLTADQITEKVKELVRAGAEI 96
BLAST of mRNA_L-elsbetiae_contig10693.650.1 vs. uniprot
Match: A0A0A0LDA2_CUCSA (L51_S25_CI-B8 domain-containing protein n=10 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0LDA2_CUCSA) HSP 1 Score: 100 bits (248), Expect = 3.460e-22 Identity = 49/95 (51.58%), Postives = 62/95 (65.26%), Query Frame = 1 Query: 1 MAWRASLSRNVRELRFCCCNVSQTGAPVREFFRSNYAELKTLNPSFPILLREGTGADPYLLATYDYGVEHRLPLNGLSQEDIAKEVEKAVEKGAS 285 MAWR LS+N++ELR C S + AP R F NY +LKTLNP FPIL+RE +G +P L A YD G+E L GLS+ I+K +E V+ GAS Sbjct: 1 MAWRGKLSKNLKELRILLCQSSPSSAPARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95
BLAST of mRNA_L-elsbetiae_contig10693.650.1 vs. uniprot
Match: A0A2I4FC77_JUGRE (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like n=6 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4FC77_JUGRE) HSP 1 Score: 100 bits (248), Expect = 3.770e-22 Identity = 50/96 (52.08%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 1 MAWRASLSRNVRELRFCCCNVSQTGAPVREFFRSNYAELKTLNPSFPILLREGTGADPYLLATYDYGVEHRLPLNGLSQEDIAKEVEKAVEKGASL 288 MAWR LSRN++ELR C S + R F NY +LKTLNP FPIL+RE +G +P L A YD GVE + L GL++ I K VE V+ GASL Sbjct: 1 MAWRGHLSRNMKELRILLCQTSPASSSARAFVEKNYKDLKTLNPKFPILIRECSGIEPQLWARYDMGVERGIRLEGLTEAQILKAVEDLVKVGASL 96
BLAST of mRNA_L-elsbetiae_contig10693.650.1 vs. uniprot
Match: I1IWN0_BRADI (L51_S25_CI-B8 domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1IWN0_BRADI) HSP 1 Score: 99.8 bits (247), Expect = 4.530e-22 Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 1 Query: 1 MAWRASLSRNVRELRFCCCNVSQTGAPVREFFRSNYAELKTLNPSFPILLREGTGADPYLLATYDYGVEHRLPLNGLSQEDIAKEVEKAVEKG 279 MAWRASLSR+V+E+RF C S AP REF + NYA++KT NPS P L+RE +G +P L A YD GVE + L GL++ I K++E + G Sbjct: 1 MAWRASLSRSVKEIRFLFCQSSPASAPAREFVKKNYADIKTSNPSLPFLVRECSGVEPQLWARYDMGVERCVSLGGLTEAQIDKKLEDLAKAG 93 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10693.650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10693.650.1 >prot_L-elsbetiae_contig10693.650.1 ID=prot_L-elsbetiae_contig10693.650.1|Name=mRNA_L-elsbetiae_contig10693.650.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=113bp MAWRASLSRNVRELRFCCCNVSQTGAPVREFFRSNYAELKTLNPSFPILLback to top mRNA from alignment at L-elsbetiae_contig10693:786..3596+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10693.650.1 ID=mRNA_L-elsbetiae_contig10693.650.1|Name=mRNA_L-elsbetiae_contig10693.650.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2811bp|location=Sequence derived from alignment at L-elsbetiae_contig10693:786..3596+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10693:786..3596+ >mRNA_L-elsbetiae_contig10693.650.1 ID=mRNA_L-elsbetiae_contig10693.650.1|Name=mRNA_L-elsbetiae_contig10693.650.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=678bp|location=Sequence derived from alignment at L-elsbetiae_contig10693:786..3596+ (Laminarionema elsbetiae ELsaHSoW15)back to top |