mRNA_L-elsbetiae_contig10688.644.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10688.644.1 vs. uniprot
Match: D8LL40_ECTSI (Centrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL40_ECTSI) HSP 1 Score: 201 bits (510), Expect = 6.330e-64 Identity = 102/118 (86.44%), Postives = 110/118 (93.22%), Query Frame = 1 Query: 13 MIRRAEAIRTPRKSLVGR-SEVRVPLTAVQKREVDEAFGLFDYAKTGVLDLHEVKVLMRSLGFPVRRAEVPLIVHRADPDSDGQVDLPTFRIIMEARYAKLDPEEEIRKAFRLFDIEG 363 MIRRAE +RTPRKS+ G SE RVPLTA QK+EVDEAFGLFDYAKTGVL LHEVKVL+RSLGFPVRRAEVPLIVHRA+PDSDG+VDLPTFR+IME RYAKLDPEEEI+KAFRLFDIEG Sbjct: 1 MIRRAEGLRTPRKSMAGGGSEARVPLTAEQKKEVDEAFGLFDYAKTGVLGLHEVKVLIRSLGFPVRRAEVPLIVHRANPDSDGEVDLPTFRLIMETRYAKLDPEEEIKKAFRLFDIEG 118
BLAST of mRNA_L-elsbetiae_contig10688.644.1 vs. uniprot
Match: A0A7S1XUU8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUU8_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.480e-28 Identity = 64/118 (54.24%), Postives = 80/118 (67.80%), Query Frame = 1 Query: 4 KTTMIRRAEAIR-TPRKSLVGRSEVRVPLTAVQKREVDEAFGLFDYAKTGVLDLHEVKVLMRSLGFPVRRAEVPLIVHRADPDSDGQVDLPTFRIIMEARYAKLDPEEEIRKAFRLFD 354 K +M+ RAE + TP + R +R LT QK+E+ EAF LFD KT +DLHE+KVLMR+LGF VR+ EV +VH DP +DG V+ F IM +YA+ DPEEEIRKAFRLFD Sbjct: 26 KMSMLSRAENLGLTPHRV---RRRIRPMLTDDQKQELREAFDLFDSDKTSSIDLHELKVLMRALGFDVRKQEVLKLVHEVDPHNDGSVNFDQFMEIMTDKYAERDPEEEIRKAFRLFD 140
BLAST of mRNA_L-elsbetiae_contig10688.644.1 vs. uniprot
Match: A0A7S1U7H6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7H6_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.870e-28 Identity = 64/118 (54.24%), Postives = 80/118 (67.80%), Query Frame = 1 Query: 4 KTTMIRRAEAIR-TPRKSLVGRSEVRVPLTAVQKREVDEAFGLFDYAKTGVLDLHEVKVLMRSLGFPVRRAEVPLIVHRADPDSDGQVDLPTFRIIMEARYAKLDPEEEIRKAFRLFD 354 K +M+ RAE + TP + R +R LT QK+E+ EAF LFD KT +DLHE+KVLMR+LGF VR+ EV +VH DP +DG V+ F IM +YA+ DPEEEIRKAFRLFD Sbjct: 26 KMSMLSRAENLGLTPHRV---RRRIRPMLTDDQKQELREAFDLFDSDKTSSIDLHELKVLMRALGFDVRKQEVLKLVHEVDPHNDGSVNFDQFMEIMTDKYAERDPEEEIRKAFRLFD 140
BLAST of mRNA_L-elsbetiae_contig10688.644.1 vs. uniprot
Match: A0A6S9FI83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FI83_HETAK) HSP 1 Score: 107 bits (268), Expect = 3.220e-27 Identity = 60/118 (50.85%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 13 MIRRAEAIRTPRKSLVG----RSEVRVPLTAVQKREVDEAFGLFDYAKTGVLDLHEVKVLMRSLGFPVRRAEVPLIVHRADPDSDGQVDLPTFRIIMEARYAKLDPEEEIRKAFRLFD 354 M++RAE R S++G + + R+ LT +K E+ EAF LFD KTG +DLHE+KVL+R+LGFPV++ EV +VH DP +DG VD+ T+ IM+ +YA DP+EEI KAF LFD Sbjct: 1 MLKRAEQDRGS--SMIGGRIVKRKQRIDLTEDEKIELKEAFTLFDANKTGSIDLHELKVLIRALGFPVKKQEVLKMVHDVDPHNDGFVDMDTYMEIMQDKYALRDPDEEILKAFALFD 116
BLAST of mRNA_L-elsbetiae_contig10688.644.1 vs. uniprot
Match: A0A7S2BMG2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BMG2_9STRA) HSP 1 Score: 106 bits (265), Expect = 7.560e-27 Identity = 53/101 (52.48%), Postives = 69/101 (68.32%), Query Frame = 1 Query: 61 GRSEVRVPLTAVQKREVDEAFGLFDYAKTGVLDLHEVKVLMRSLGFPVRRAEVPLIVHRADPDSDGQVDLPTFRIIMEARYAKLDPEEEIRKAFRLFDIEG 363 GR RV LT QK+E+ EAF LFD K G +DLHE+KVLMR+LGF V++ +V VH DP ++G V+ F +M RY + DP+EEI KAF+LFD +G Sbjct: 12 GRRRARVELTEDQKQELREAFELFDADKKGSIDLHELKVLMRALGFQVKKQDVVKFVHEIDPQNEGMVNFEQFMDLMTDRYTERDPDEEILKAFQLFDTDG 112
BLAST of mRNA_L-elsbetiae_contig10688.644.1 vs. uniprot
Match: A0A7S3GV94_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GV94_9STRA) HSP 1 Score: 106 bits (264), Expect = 9.360e-27 Identity = 55/90 (61.11%), Postives = 65/90 (72.22%), Query Frame = 1 Query: 85 LTAVQKREVDEAFGLFDYAKTGVLDLHEVKVLMRSLGFPVRRAEVPLIVHRADPDSDGQVDLPTFRIIMEARYAKLDPEEEIRKAFRLFD 354 LT QK+E+ EAF LFD KTG +DLHE+KVLMR+LGF V++ EV +VH DP + G VD F IM RYA DPEEEIRKAF+LFD Sbjct: 15 LTEDQKQELREAFELFDANKTGSIDLHELKVLMRALGFDVKKPEVVKMVHDVDPSNVGSVDYEQFLEIMSDRYASRDPEEEIRKAFQLFD 104
BLAST of mRNA_L-elsbetiae_contig10688.644.1 vs. uniprot
Match: A0A7S2V697_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V697_9STRA) HSP 1 Score: 103 bits (257), Expect = 9.580e-26 Identity = 51/93 (54.84%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 76 RVPLTAVQKREVDEAFGLFDYAKTGVLDLHEVKVLMRSLGFPVRRAEVPLIVHRADPDSDGQVDLPTFRIIMEARYAKLDPEEEIRKAFRLFD 354 R LTA ++ E+ EAF LFD TG +DLHE+KVL+R+LGFPV++ EV +VH DP ++G VD+ + IM+ +YA DPEEEI KAF+LFD Sbjct: 14 RTELTAEERAELKEAFDLFDARHTGRIDLHELKVLIRALGFPVKKNEVVRLVHDVDPYNEGIVDMDQYMEIMQEKYAARDPEEEIIKAFKLFD 106
BLAST of mRNA_L-elsbetiae_contig10688.644.1 vs. uniprot
Match: A0A812R5A4_SYMMI (Calmodulin n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812R5A4_SYMMI) HSP 1 Score: 101 bits (251), Expect = 6.740e-25 Identity = 50/86 (58.14%), Postives = 64/86 (74.42%), Query Frame = 1 Query: 97 QKREVDEAFGLFDYAKTGVLDLHEVKVLMRSLGFPVRRAEVPLIVHRADPDSDGQVDLPTFRIIMEARYAKLDPEEEIRKAFRLFD 354 QK E+ EAF LFD KTG +DLHE+KVLMR+LGF V++ ++ +VH DP++ G VD P F IM RYA+ +PEEEI KAF+LFD Sbjct: 10 QKLELREAFELFDADKTGSIDLHELKVLMRALGFDVKKPDIVRMVHDVDPNNSGSVDYPQFLEIMTDRYAERNPEEEIVKAFQLFD 95
BLAST of mRNA_L-elsbetiae_contig10688.644.1 vs. uniprot
Match: A0A8J2SDG7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SDG7_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.620e-22 Identity = 44/89 (49.44%), Postives = 64/89 (71.91%), Query Frame = 1 Query: 97 QKREVDEAFGLFDYAKTGVLDLHEVKVLMRSLGFPVRRAEVPLIVHRADPDSDGQVDLPTFRIIMEARYAKLDPEEEIRKAFRLFDIEG 363 ++ E+ EAF LFD+ K+G L++HE+KVLMR+LGF V++ +V +H +P ++G VD + IM +YA DPEEEI KAF+LFD +G Sbjct: 10 EQAELKEAFDLFDHEKSGKLNIHELKVLMRALGFQVKKRDVVKCIHDIEPQNEGHVDFSLYAQIMAEKYALRDPEEEILKAFQLFDHDG 98
BLAST of mRNA_L-elsbetiae_contig10688.644.1 vs. uniprot
Match: F0XVG3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVG3_AURAN) HSP 1 Score: 95.1 bits (235), Expect = 1.750e-22 Identity = 45/86 (52.33%), Postives = 63/86 (73.26%), Query Frame = 1 Query: 106 EVDEAFGLFDYAKTGVLDLHEVKVLMRSLGFPVRRAEVPLIVHRADPDSDGQVDLPTFRIIMEARYAKLDPEEEIRKAFRLFDIEG 363 E+ EAF LFD K+G ++LHE+KVL+R+LGF V++ +V +VH +P ++G VD F +M RYA+ DPEEEI KAF+LFD +G Sbjct: 15 ELREAFELFDSEKSGKINLHELKVLLRALGFQVKKTDVIKMVHELEPSNEGSVDFLLFSQLMAERYAERDPEEEIMKAFQLFDNDG 100 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10688.644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10688.644.1 >prot_L-elsbetiae_contig10688.644.1 ID=prot_L-elsbetiae_contig10688.644.1|Name=mRNA_L-elsbetiae_contig10688.644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=117bp MIRRAEAIRTPRKSLVGRSEVRVPLTAVQKREVDEAFGLFDYAKTGVLDLback to top mRNA from alignment at L-elsbetiae_contig10688:756..2690- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10688.644.1 ID=mRNA_L-elsbetiae_contig10688.644.1|Name=mRNA_L-elsbetiae_contig10688.644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1935bp|location=Sequence derived from alignment at L-elsbetiae_contig10688:756..2690- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10688:756..2690- >mRNA_L-elsbetiae_contig10688.644.1 ID=mRNA_L-elsbetiae_contig10688.644.1|Name=mRNA_L-elsbetiae_contig10688.644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=702bp|location=Sequence derived from alignment at L-elsbetiae_contig10688:756..2690- (Laminarionema elsbetiae ELsaHSoW15)back to top |