mRNA_L-elsbetiae_contig10682.642.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10682.642.1
Unique NamemRNA_L-elsbetiae_contig10682.642.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10682.642.1 vs. uniprot
Match: D7G8U3_ECTSI (Ribosomal_L2_C domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=D7G8U3_ECTSI)

HSP 1 Score: 501 bits (1290), Expect = 3.190e-179
Identity = 243/254 (95.67%), Postives = 251/254 (98.82%), Query Frame = 1
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYTGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQEKE 762
            MGKVIRGQRKGKGGIFTSHTRLRKGPVK RKLDYAERHGYIKGV+KD+IHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMY+GQFIYCGKKASLTVGNIMP+ SMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDE+KGTSK+RLPSGSKKT+SSDCRAMVGIVAGGGRTDKPMLKAGRAYHK+RVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIR EKE
Sbjct:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKLRKLDYAERHGYIKGVVKDLIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPVRSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEEKGTSKLRLPSGSKKTISSDCRAMVGIVAGGGRTDKPMLKAGRAYHKFRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRTEKE 254          
BLAST of mRNA_L-elsbetiae_contig10682.642.1 vs. uniprot
Match: A0A7S2V227_9STRA (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S2V227_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 4.000e-158
Identity = 213/251 (84.86%), Postives = 234/251 (93.23%), Query Frame = 1
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYTGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQ 753
            MGKVIRGQRKGKG +F SHT+ RKG VKFRKLDYAERHGY+KGV+K I+HEPGRGAPLA V F+NPY+FK+D EL+VAVEGMY+G FIYCGKKA LT+GNIMP+G+MPEGTVC +IEA  GDRGTFARCSGDYAV+ISHDEDKGTS+IRLPSGSKKT+ S CRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST+NRLASAG+KVGLIAARRTGRLRGI++
Sbjct:    1 MGKVIRGQRKGKGSVFVSHTKNRKGAVKFRKLDYAERHGYVKGVVKQILHEPGRGAPLAVVAFKNPYRFKKDTELMVAVEGMYSGMFIYCGKKAILTIGNIMPVGAMPEGTVCCNIEAAPGDRGTFARCSGDYAVVISHDEDKGTSRIRLPSGSKKTIKSLCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPKVRGVAMNPVEHPHGGGNHQHIGHPSTSNRLASAGKKVGLIAARRTGRLRGIKK 251          
BLAST of mRNA_L-elsbetiae_contig10682.642.1 vs. uniprot
Match: A0A835ZD66_9STRA (Translation protein SH3-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD66_9STRA)

HSP 1 Score: 446 bits (1148), Expect = 1.630e-157
Identity = 209/254 (82.28%), Postives = 236/254 (92.91%), Query Frame = 1
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYTGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQEKE 762
            MGKVIRG RKG+G +FTSHTRLRKGPVK RKLDYAERHGYIKGV+K+IIHEP RGAP+AK+QFQNPY++K+DNELIVA EGMYTG FIYCGKKA LTVGNI+P+GSMPEG+V  ++E++ GDRG+ ARCSGDYAV+++HDEDKGT+KIRLPSGSKKT+ S+CRAMVGI+AGGGRTDKP+LKAGRAYHKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  RLASAGQKVGLIAARRTGRLRGI++  E
Sbjct:    1 MGKVIRGCRKGRGTVFTSHTRLRKGPVKLRKLDYAERHGYIKGVVKEIIHEPARGAPIAKIQFQNPYEYKKDNELIVAAEGMYTGMFIYCGKKAQLTVGNILPVGSMPEGSVICNVESRPGDRGSLARCSGDYAVVVTHDEDKGTTKIRLPSGSKKTIFSNCRAMVGIIAGGGRTDKPLLKAGRAYHKYRVKRNEWPRVRGVAMNPVEHPHGGGNHQHIGHPSTTKRLASAGQKVGLIAARRTGRLRGIKKTSE 254          
BLAST of mRNA_L-elsbetiae_contig10682.642.1 vs. uniprot
Match: A0A7R9UAP5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAP5_9STRA)

HSP 1 Score: 416 bits (1069), Expect = 1.770e-145
Identity = 190/251 (75.70%), Postives = 227/251 (90.44%), Query Frame = 1
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYTGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQ 753
            MGKV+RG RKGKG +F SHTRLRKGP K R+LD++ER GY+KG++K+I+HEPGRGAPLA++QFQNPYK+++DNEL+V  EGMY+GQFI+CGKKA L+VGNI+PLG +PEGTV  ++E+ +GDRG   + SG Y V+I+ DEDKGTS+IRLPSG+KKT+S+ CRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWP VRGVAMNPVEHPFGGGNHQHIGHPST NR+ SAG+KVGLIAARRTGRLRG+++
Sbjct:    1 MGKVVRGCRKGKGSVFKSHTRLRKGPAKLRRLDFSERTGYVKGLVKEILHEPGRGAPLARIQFQNPYKYQKDNELMVCAEGMYSGQFIFCGKKADLSVGNILPLGQLPEGTVVCNVESYIGDRGNLIKTSGGYGVVITQDEDKGTSRIRLPSGAKKTLSNKCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPKVRGVAMNPVEHPFGGGNHQHIGHPSTTNRMCSAGKKVGLIAARRTGRLRGVKK 251          
BLAST of mRNA_L-elsbetiae_contig10682.642.1 vs. uniprot
Match: F0YEL9_AURAN (Ribosomal_L2_C domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEL9_AURAN)

HSP 1 Score: 414 bits (1063), Expect = 1.400e-144
Identity = 194/251 (77.29%), Postives = 221/251 (88.05%), Query Frame = 1
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYTGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQ 753
            MGKVIRG RKGKG IFT+HTRLRKGPVK RK DYAE+ GY+KGV+K I+HE GRGAP+AKVQFQN Y+F+RDNEL VA EG+Y G FIYCG KA L VGN++P+ ++PEGTV  + EA+ GDRG FARCSGDYAV+++HDED GT+K+RLPSG KKTV S CRAM+GIVAGGGRTDKPMLKAGRAYHKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  R+ SAG+KVGLIAARRTGRLRG+++
Sbjct:    1 MGKVIRGCRKGKGTIFTAHTRLRKGPVKLRKADYAEKTGYVKGVVKAIVHESGRGAPIAKVQFQNSYRFQRDNELFVAAEGLYEGAFIYCGAKAQLAVGNVLPISAIPEGTVICNAEARPGDRGAFARCSGDYAVVVTHDEDHGTTKLRLPSGGKKTVKSVCRAMIGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPKVRGVAMNPVEHPHGGGNHQHIGHPSTTKRICSAGKKVGLIAARRTGRLRGLKK 251          
BLAST of mRNA_L-elsbetiae_contig10682.642.1 vs. uniprot
Match: A0A7S2WUG0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUG0_9STRA)

HSP 1 Score: 410 bits (1053), Expect = 8.250e-143
Identity = 195/248 (78.63%), Postives = 217/248 (87.50%), Query Frame = 1
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYTGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRG 744
            MGKV RGQRKGKG IF SHTRLR G VK R LDYAER G+ KGVIKD +HEPGRGAP+AKVQF N Y++KRDN L VAVEGMYTGQF+YCGKKA LTVGNI+PLG+MPEGT+  +IEAK GDRG  A+CSGDYAV+++HDEDKGT+++RLPSGSKKT+S+ CRA VGIVAGGGRTDKP+LKAGRA+HKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  R   AG+K GLIAARRTGRL G
Sbjct:   20 MGKVTRGQRKGKGSIFKSHTRLRVGEVKQRALDYAEREGFTKGVIKDFVHEPGRGAPVAKVQFHNAYRYKRDNNLFVAVEGMYTGQFLYCGKKAKLTVGNILPLGAMPEGTIVCNIEAKPGDRGKMAKCSGDYAVVVTHDEDKGTTRVRLPSGSKKTLSNKCRAAVGIVAGGGRTDKPLLKAGRAFHKYRVKRNEWPKVRGVAMNPVEHPHGGGNHQHIGHPSTTRREDPAGKKAGLIAARRTGRLAG 267          
BLAST of mRNA_L-elsbetiae_contig10682.642.1 vs. uniprot
Match: A0A418F530_9STRA (Ribosomal_L2_C domain-containing protein n=14 Tax=Saprolegniaceae TaxID=4764 RepID=A0A418F530_9STRA)

HSP 1 Score: 404 bits (1038), Expect = 8.660e-141
Identity = 187/251 (74.50%), Postives = 220/251 (87.65%), Query Frame = 1
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYTGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQ 753
            MG+VIRGQRKG GGIF SH + RKG   FR  DY ER GYIKGVIK+IIH+PGRGAPLA+V F++PYK++ ++EL++A EGMYTG FIY GKKA++ VGNI+PL  +PEGT+  ++EA++GD+G FARCSGDYAV+++HDEDKG +KIRLPSGSKKT+ S CRAMVG+VAGGGRTDKP+LKAGRAYHKYRVKRNEWPHVRGVAMNPVEHP GGGNHQHIGHPST  R   AG+KVGLIAARRTGRLRGI++
Sbjct:    1 MGRVIRGQRKGAGGIFKSHVKTRKGKAAFRTNDYVEREGYIKGVIKEIIHDPGRGAPLARVSFRDPYKYRINHELLIAAEGMYTGMFIYAGKKATMAVGNILPLSQLPEGTIVCNVEARIGDKGKFARCSGDYAVIVTHDEDKGKTKIRLPSGSKKTIPSACRAMVGVVAGGGRTDKPILKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPHGGGNHQHIGHPSTVKRDPPAGKKVGLIAARRTGRLRGIKK 251          
BLAST of mRNA_L-elsbetiae_contig10682.642.1 vs. uniprot
Match: K3X5U7_GLOUD (Ribosomal_L2_C domain-containing protein n=5 Tax=Eukaryota TaxID=2759 RepID=K3X5U7_GLOUD)

HSP 1 Score: 402 bits (1032), Expect = 7.100e-140
Identity = 186/251 (74.10%), Postives = 223/251 (88.84%), Query Frame = 1
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYTGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQ 753
            MG+VIRGQRKG GGIF SHT  R+G   FR LDY ERHGYIKGV+K+IIH+ GRGAPLA+V +++PY++K ++EL++A EGMYTGQFIY G KA++TVGNI+PL ++PEGT+  ++EA+VGDRG+FAR SGDYAV+++HDEDKG +K+RLPSGSKKTV S CRAM+G+VAGGGRTDKP+LKAGRAYHKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  R A +G+KVGLIAARRTGRLRGI++
Sbjct:    1 MGRVIRGQRKGAGGIFKSHTAKRQGAAAFRSLDYVERHGYIKGVVKEIIHDSGRGAPLARVTYRDPYRYKLNHELLIAAEGMYTGQFIYSGAKAAMTVGNILPLSALPEGTIVCNVEARVGDRGSFARASGDYAVIVTHDEDKGRTKLRLPSGSKKTVPSACRAMIGVVAGGGRTDKPILKAGRAYHKYRVKRNEWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDAPSGKKVGLIAARRTGRLRGIKK 251          
BLAST of mRNA_L-elsbetiae_contig10682.642.1 vs. uniprot
Match: A0A7S1U069_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U069_9STRA)

HSP 1 Score: 402 bits (1032), Expect = 7.620e-140
Identity = 187/251 (74.50%), Postives = 218/251 (86.85%), Query Frame = 1
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYTGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQ 753
            MGKV++  RKGKG +F SHTRLRKG V+ R LD+ ER GYIKG++KDIIHEPGRGAPLAKVQF N Y++K+DN L+VA EGMYTGQFI+CGKKA L VGNI+PLG +PEGTV  ++E   GDRG   + SG Y V+I+ DEDKGT++IRLPSG+KKT+S+ CRAMVGIVAGGGRTDKP+LKAGRAYHKYRVKRNEWP +RGVA NPVEHPFGGGNHQHIGHPST NR+ SAG+KVGLIAARRTGRLRG+++
Sbjct:    1 MGKVVQACRKGKGSVFKSHTRLRKGKVQMRALDFGERTGYIKGIVKDIIHEPGRGAPLAKVQFNNAYEYKKDNTLLVAAEGMYTGQFIFCGKKAQLAVGNILPLGQLPEGTVVCNVETYAGDRGNLIKTSGGYGVVITQDEDKGTTRIRLPSGAKKTLSNKCRAMVGIVAGGGRTDKPLLKAGRAYHKYRVKRNEWPKIRGVAKNPVEHPFGGGNHQHIGHPSTTNRMCSAGKKVGLIAARRTGRLRGVKK 251          
BLAST of mRNA_L-elsbetiae_contig10682.642.1 vs. uniprot
Match: I2CPH3_NANGC (Large subunit ribosomal protein L8e n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPH3_NANGC)

HSP 1 Score: 399 bits (1026), Expect = 6.030e-139
Identity = 188/254 (74.02%), Postives = 222/254 (87.40%), Query Frame = 1
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYTGQFIYCGKKASLTVGNIMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRQEKE 762
            MGKVIR  RKG GGIF SHT+L K PVK RKLDYAE+HGYIKGV+K+I+HE GRGAP+A+VQF+N Y+FKRD E  VAVEG+Y+GQFI+ GKKA+L +GN++PL  +PEGTV S++EA+ GDRG+FAR SG YAV+++ DED+GT+KIRLPSG+KKTVSS  R ++GI+AGGGRTDKPMLKAGRAYHKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  R A AG+KVGL+AARRTGRLRGI++  E
Sbjct:    1 MGKVIRTCRKGVGGIFKSHTKLNKNPVKLRKLDYAEKHGYIKGVVKEIVHESGRGAPIARVQFKNAYRFKRDTESFVAVEGIYSGQFIFAGKKAALVIGNVLPLSQIPEGTVVSNVEARPGDRGSFARTSGGYAVIVAQDEDRGTTKIRLPSGAKKTVSSSSRGVIGIIAGGGRTDKPMLKAGRAYHKYRVKRNEWPKVRGVAMNPVEHPHGGGNHQHIGHPSTVKRDAPAGKKVGLVAARRTGRLRGIKKNAE 254          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10682.642.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8U3_ECTSI3.190e-17995.67Ribosomal_L2_C domain-containing protein n=3 Tax=E... [more]
A0A7S2V227_9STRA4.000e-15884.86Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A835ZD66_9STRA1.630e-15782.28Translation protein SH3-like domain-containing pro... [more]
A0A7R9UAP5_9STRA1.770e-14575.70Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
F0YEL9_AURAN1.400e-14477.29Ribosomal_L2_C domain-containing protein n=1 Tax=A... [more]
A0A7S2WUG0_9STRA8.250e-14378.63Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A418F530_9STRA8.660e-14174.50Ribosomal_L2_C domain-containing protein n=14 Tax=... [more]
K3X5U7_GLOUD7.100e-14074.10Ribosomal_L2_C domain-containing protein n=5 Tax=E... [more]
A0A7S1U069_9STRA7.620e-14074.50Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
I2CPH3_NANGC6.030e-13974.02Large subunit ribosomal protein L8e n=1 Tax=Nannoc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10682contigL-elsbetiae_contig10682:2656..5616 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score503.8
Seed ortholog evalue4.6e-140
Seed eggNOG ortholog2880.D7G8U3
Preferred nameRPL8
KEGG koko:K02938,ko:K09228
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009719,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015934,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0042221,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048519,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0065007,GO:0070013,GO:0070727,GO:0070848,GO:0070887,GO:0070972,GO:0071310,GO:0071363,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990089,GO:1990090,GO:1990904,GO:1990932
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG0090@1,KOG2309@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03000,ko03011
Ec32 ortholog descriptionRibosomal protein L2, C-terminal
Ec32 orthologEc-15_004240.1
Exons3
Model size765
Cds size765
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10682.642.1prot_L-elsbetiae_contig10682.642.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10682 2656..5616 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815287.2265716-CDS-L-elsbetiae_contig10682:2655..28571622815287.2265716-CDS-L-elsbetiae_contig10682:2655..2857Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10682 2656..2857 -
1691682818.2515397-CDS-L-elsbetiae_contig10682:2655..28571691682818.2515397-CDS-L-elsbetiae_contig10682:2655..2857Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10682 2656..2857 -
1622815287.2397652-CDS-L-elsbetiae_contig10682:3746..40291622815287.2397652-CDS-L-elsbetiae_contig10682:3746..4029Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10682 3747..4029 -
1691682818.2682889-CDS-L-elsbetiae_contig10682:3746..40291691682818.2682889-CDS-L-elsbetiae_contig10682:3746..4029Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10682 3747..4029 -
1622815287.2516878-CDS-L-elsbetiae_contig10682:5336..56161622815287.2516878-CDS-L-elsbetiae_contig10682:5336..5616Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10682 5337..5616 -
1691682818.278462-CDS-L-elsbetiae_contig10682:5336..56161691682818.278462-CDS-L-elsbetiae_contig10682:5336..5616Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10682 5337..5616 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10682.642.1

>prot_L-elsbetiae_contig10682.642.1 ID=prot_L-elsbetiae_contig10682.642.1|Name=mRNA_L-elsbetiae_contig10682.642.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=255bp
MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIH
EPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYTGQFIYCGKKASLTVGN
IMPLGSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEDKGTSKIRL
PSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPHVR
GVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIR
QEKE*
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mRNA from alignment at L-elsbetiae_contig10682:2656..5616-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10682.642.1 ID=mRNA_L-elsbetiae_contig10682.642.1|Name=mRNA_L-elsbetiae_contig10682.642.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2961bp|location=Sequence derived from alignment at L-elsbetiae_contig10682:2656..5616- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGTAAGGTTATCCGCGGGCAAAGGAAGGGTAAGGGAGGTATCTTCAC CTCCCACACGCGCCTCCGCAAGGGGCCCGTGAAGTTCCGCAAGCTCGACT ACGCGGAGCGCCACGGCTACATCAAGGGCGTGATCAAGGACATCATCCAC GAGCCCGGGAGGGGCGCGCCCCTGGCCAAGGTCCAGTTCCAGAACCCCTA CAAGTTCAAGAGGGACAACGAACTGATTGTGGCCGTGGAGGGCATGTACA CCGGGCAGTTCATCTACTGCGGGAAGAAGGGTGCGCGCTTTTTTGTGTGA CCGAAGTCCTCACCCACACTTTTTTTTTGTGTGGGCACGAGAGGGCGGAT TTGATGGGTGGCTCCCGATAACAGCTCGCAGCAGCAGCAGCAGCAGCAAC GGCAGCAGCAGCAACCGCAGACCCTGAAATGTTGATGGGTGGTACCCGAT AACAGCCAGCTCGCCTGGGGGTGTGCAATGTGTGTGGACCACAGCCTCCC CCTTCGCACGGCGACGAAGCGCAAAAAAAAAGACCCTCCCTTGAATTTGA CCCTCTCGTTGCTTTCCCCTTGCCGTCTCTCCCCTGCGCTCTCTCGTTCC TCGGCTTTTCCTTTTTTGAAAAAGCCGGGTGAACGCAGAGACGGAGGGAT GAGAGCGGGAAGGCAAGCCGTGGGTTGGGTCTTTTTGGGTTGGTCTCGAC GCACTTGATGGATGGCGTCCGAAAACAGCCACGGGCAGCAAGCAAGGCAG TTGGTCTGCTTGACTTGTGTAGTGTAGTGCGTTTTCTGGGTAGTCATGCG AGTACATTGGAAATATATAAAGTGGTTGTAGGAATGTGTATGTAGTCTGA GGAGTGTTGCATATCTTGTAGTTTGAGACAGTGTTTCCCGAAGGTTCCAT TTTACACTGTTGCCGTAATAGAGGCAGCGTCTGCTTGTGGCGCTGCTCTG CACCTTCGTGATTCATGGTTCACGAACGAGACCCGTGTTGTTTAACATGC TCACGTGGTACATTTGCATGTTTTTCGTGTTGGGTGGGTGCCTTTGTAGG TCGGTGCTTGCCATAGATGGGCAAACATCCTGTCCTCGTGCATGTACAAC ACGGAAAATATTTTATTAGGCGGCGTGCACATGTGTTGTTATCTTCACAT TTATTATTCATTTCCAGTGCTCGATGGACTCCCTGTCTTGTCACGAGGAC ATCTTACCAGAGTACTGAACCGTGTTCACACAGAAGGGTTCCTTTCCCCG AGGCCCCCACTCCCCCCGTCTGCGTTGCTTGCATAAGATTTTTGTCGCGG CAACATATAGACTCGATGGATTCCCGGAGTGTAGATACTGTTGATTCACC GTGTCTCTTCACGTATGTGTTTTCAACTAATCCTCCCCTCCCCCGCCGCT CTGCCGCACCGCACCTGCCCCGTCCACCCTACTCTCGCCTTTGTTTCTCC CTGTGTACCTTGCTGCTTTTTTTTTCTGTGCCCCCGACCTCCCTTCCCCC CTTCTCTCCCCCCCCCGCACCAAATCAAATCGATTGCATTCCACCGCAAT CCCCAACCCCCTCCATTTCTCCATCACGGACAAACAGCCTCCCTCACCGT GGGCAACATCATGCCCCTGGGCTCCATGCCCGAGGGGACCGTGTGCTCCT CCATCGAGGCCAAGGTGGGCGACCGCGGCACCTTCGCCCGGTGCTCGGGC GACTACGCCGTCCTCATCTCCCACGACGAGGACAAGGGCACCAGCAAGAT CCGCCTCCCCTCCGGCTCGAAGAAGACCGTCAGCTCGGACTGCCGCGCCA TGGTCGGCATCGTCGCCGGCGGTGGCAGGACCGACAAGCCCATGCTCAAG GCGGGCCGCGCGTACCACAAGTGAGATTTTCTTTTTTGAGCGTTCGAGTT TCGAGTGTCTCGCTCGCGAGGCCCCTACTGTTGTACCCACACAACGCGTG TTGATTGCCACTAAATTGTATCTCTAGTAGACCCTGGAATCGGGAAAGTT TCTCGTTGTTTTTCGCACCACAAGGTGGTTTCGCCTTTCCCGCCTCCGAC TTGACTGAATAATCGAACGCTGGATTGGGGGACACCGCATGATCAAAAAA GCAACCCCACCAGCAACAACTATTGATCTACCTGCAGTCGGCCGGTTGAA GCGATTTTTTCCCGCGCAAGGCAACAGCAGCGGCAGCAACCCGCCATTCA AAAAGTTGCCTGCACTTGTTTATGTGATTATTTTTTTGCATCGCGATGCA AACGTAGATTCATGCCTGCAGTCGGCTGGGTGCGCGCAGCGAGTTTTGCC TGGGCACCCTGGTGTTTAAAACTCCATTACACCCGATTCTGAGAGTTCCT TTTTTACGCAGGCTGGGCGTATAGATATAGATAAGGCCGCAACCTTTACG GTTGGTAATACATAGATGTACACTTATTGCCGAAAGCAACAAAAAATACT CTGCGTGACGGCGCAGCGGAGTGACTCCTTATCGATTTATTGATCCTGTG TTTCATCAAAAATATGCCCTTATGTACCAACATACCCGATATAATTTTTG TTTTTGGCGCAACATGCACGCGTGTAATGTATATAGGTTCCAGCAACACA TTCGTCCTCTCCCTCTCGTTGCTGCATTTCGAGTATTTCCCAAAAAAACA CTTTGTACCATTCATATGTAATGTTTTTTGGTGTTCACGCAACGGTCGTC TAACCAGCAACACACCCGACCCCCGTCCCCTCCTCCCTCCTCCGCACTGC GTTATTAAGGTACCGCGTGAAGCGCAACGAGTGGCCCCACGTGCGTGGTG TGGCGATGAACCCCGTGGAGCACCCCTTCGGTGGTGGTAACCACCAGCAC ATCGGGCACCCGTCCACGGCCAACCGTCTCGCGTCCGCCGGTCAGAAGGT CGGCCTCATCGCCGCCCGCCGCACCGGCCGCCTCAGGGGCATCCGCCAGG AGAAGGAATAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10682:2656..5616-

>mRNA_L-elsbetiae_contig10682.642.1 ID=mRNA_L-elsbetiae_contig10682.642.1|Name=mRNA_L-elsbetiae_contig10682.642.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1530bp|location=Sequence derived from alignment at L-elsbetiae_contig10682:2656..5616- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGTAAGGTTATCCGCGGGCAAAGGAAGGGTAAGGGAGGTATCTTCAC
CTCCCACACGCGCCTCCGCAAGGGGCCCGTGAAGTTCCGCAAGCTCGACT
ACGCGGAGCGCCACGGCTACATCAAGGGCGTGATCAAGGACATCATCCAC
GAGCCCGGGAGGGGCGCGCCCCTGGCCAAGGTCCAGTTCCAGAACCCCTA
CAAGTTCAAGAGGGACAACGAACTGATTGTGGCCGTGGAGGGCATGTACA
CCGGGCAGTTCATCTACTGCGGGAAGAAGGATGGGTAAGGTTATCCGCGG
GCAAAGGAAGGGTAAGGGAGGTATCTTCACCTCCCACACGCGCCTCCGCA
AGGGGCCCGTGAAGTTCCGCAAGCTCGACTACGCGGAGCGCCACGGCTAC
ATCAAGGGCGTGATCAAGGACATCATCCACGAGCCCGGGAGGGGCGCGCC
CCTGGCCAAGGTCCAGTTCCAGAACCCCTACAAGTTCAAGAGGGACAACG
AACTGATTGTGGCCGTGGAGGGCATGTACACCGGGCAGTTCATCTACTGC
GGGAAGAAGGCCTCCCTCACCGTGGGCAACATCATGCCCCTGGGCTCCAT
GCCCGAGGGGACCGTGTGCTCCTCCATCGAGGCCAAGGTGGGCGACCGCG
GCACCTTCGCCCGGTGCTCGGGCGACTACGCCGTCCTCATCTCCCACGAC
GAGGACAAGGGCACCAGCAAGATCCGCCTCCCCTCCGGCTCGAAGAAGAC
CGTCAGCTCGGACTGCCGCGCCATGGTCGGCATCGTCGCCGGCGGTGGCA
GGACCGACAAGCCCATGCTCAAGGCGGGCCGCGCGTACCACAACCTCCCT
CACCGTGGGCAACATCATGCCCCTGGGCTCCATGCCCGAGGGGACCGTGT
GCTCCTCCATCGAGGCCAAGGTGGGCGACCGCGGCACCTTCGCCCGGTGC
TCGGGCGACTACGCCGTCCTCATCTCCCACGACGAGGACAAGGGCACCAG
CAAGATCCGCCTCCCCTCCGGCTCGAAGAAGACCGTCAGCTCGGACTGCC
GCGCCATGGTCGGCATCGTCGCCGGCGGTGGCAGGACCGACAAGCCCATG
CTCAAGGCGGGCCGCGCGTACCACAAGTACCGCGTGAAGCGCAACGAGTG
GCCCCACGTGCGTGGTGTGGCGATGAACCCCGTGGAGCACCCCTTCGGTG
GTGGTAACCACCAGCACATCGGGCACCCGTCCACGGCCAACCGTCTCGCG
TCCGCCGGTCAGAAGGTCGGCCTCATCGCCGCCCGCCGCACCGGCCGCCT
CAGGGGCATCCGCCAGGAGAAGGAATAGGTACCGCGTGAAGCGCAACGAG
TGGCCCCACGTGCGTGGTGTGGCGATGAACCCCGTGGAGCACCCCTTCGG
TGGTGGTAACCACCAGCACATCGGGCACCCGTCCACGGCCAACCGTCTCG
CGTCCGCCGGTCAGAAGGTCGGCCTCATCGCCGCCCGCCGCACCGGCCGC
CTCAGGGGCATCCGCCAGGAGAAGGAATAG
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