mRNA_L-elsbetiae_contig10541.532.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10541.532.1
Unique NamemRNA_L-elsbetiae_contig10541.532.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10541.532.1 vs. uniprot
Match: D7G4G8_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G8_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 3.100e-92
Identity = 165/328 (50.30%), Postives = 206/328 (62.80%), Query Frame = 3 
Query:  657 IGA-ALIPQHQGGGGLQPELPLDFSNRIRQWSSMECHDAFTMKKQAELDRQLLA----LQPGSDMLGVEEQIGRGSFGGVTKATYTATNEKWAIKRAAEGSDPLFLVREMFAYLSLPWHVNILEVHSMFDRSPCLALALECGACDMHAALNDQMLSYAEELDCIGDAATGLGHCHDNGVVVCDLKPANVILVYNGGRYTAKLADFGLACGRGQNRPARWGTPGFLAHEAVSEDTVAEPSADIVSLGAMATIVALKPMSREGNVFAHKVFRKPEETTELYRLAAVEGNEYARQLEAITNRTMAKPSSFFVEKITRPCLLNRMPGTAVVS 1625
            IGA A  PQ +  G   P  P   ++ +R W   +C DAF  + +     QL A    L PGS MLG EE++G G+FGGV KA   AT   WAIKR  +  D  FL+ EM  Y SLP H NIL V +++D S   ALALECG CDM  AL    LS+ +ELDC+ D   G  HC+DNGVV+CDLK +N+ILV+NG RY AK++DFGL+C  G NR  R GTPG+  HE   E TVAEPS D  S+GAM  I+AL+P  RE NVF HK+F  PEE  +L +LA  E + Y  + E I  RTM  P+S F +K+TRP ++N MPGT +VS
Sbjct:  121 IGALATAPQQEAQGS--PATPR-LADLMRNWQQNKCRDAFVARMRDGFKLQLRAARDALAPGSGMLGAEEELGHGTFGGVYKAVCDATKTTWAIKRPMKEMDKEFLIHEMLVYSSLPAHANILGVRAIYDISHSPALALECGECDMFDALFGGRLSFPDELDCLADVVAGTRHCNDNGVVLCDLKFSNIILVHNGARYVAKVSDFGLSCAIGHNRYPRCGTPGYFPHEVSLEHTVAEPSTDAFSVGAMLAILALQPKLREENVFCHKMFLTPEEALQLPQLAQAEFDSYRERQEEIAYRTMLLPNSGFAKKVTRPAVVNTMPGTQLVS 445
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BLAST of mRNA_L-elsbetiae_contig10541.532.1 vs. uniprot
Match: D7G236_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G236_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 9.960e-88
Identity = 165/330 (50.00%), Postives = 206/330 (62.42%), Query Frame = 3 
Query:  657 IGA-ALIPQHQGGGGLQPELPLDFSNRIRQWSSMECHDAFTMKKQAELDRQLLA----LQPGSDMLGVEEQIGRGSFGGVTKATYTATNEKWAIKRAAEGSDPLFLVREMFAYLSLPWHVNILEVHSMFDRSPCLALALECGACDMHAALNDQMLSYAEELDCIGDAATGLGHCHDNGVVVCDLKPANVILVYNGGRYTAKLADFGLACGRGQNRPARWGTPGFLAHEAVSEDTVAEPSADIVSLGAMATIVALKPMSREGNVFAHKVFRKPEETTELYRLAAVEGNEYARQLEAITNRTMAKPSSFFVEKITRPCLLNRMPGTAVVSSR 1631
            IGA A  PQ +  G   P  P   ++ +R W   +C DAF  + +     QL A    L PGS MLG EE++G G+FGGV KA   AT   WAIKR  +  D  FL+ EM  Y SLP H NIL V +++D S   ALALECG CDM  AL    LS+ +ELDC+ D   G  HC+DNGVV+CDLK +NVILV+NG RY AK++DFGL+C  G NR  R GTPG+  HE   E TVAEPS D  S+GAM  I+AL+P  RE NVF HK+F  PEE  +L +LA  E + Y  + E I  RTM  P+S F +K+TRP ++N MPGT + + R
Sbjct:  121 IGALATAPQQEAQGS--PATPR-LADLMRNWQQNKCRDAFVARMRDGFKLQLRAARDALAPGSGMLGAEEELGHGTFGGVYKAVCDATKTTWAIKRPMKEMDKEFLIHEMLVYSSLPAHTNILGVRAIYDISSSPALALECGECDMFDALFGGRLSFPDELDCLADVVAGTRHCNDNGVVLCDLKFSNVILVHNGARYVAKVSDFGLSCAIGHNRYPRCGTPGYFPHEVSLEHTVAEPSTDAFSVGAMLAILALQPKLREENVFCHKMFLTPEEALQLPQLAQAEFDSYRERQEEIAYRTMLLPNSGFAKKVTRPAVVNTMPGTQLTNIR 447
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BLAST of mRNA_L-elsbetiae_contig10541.532.1 vs. uniprot
Match: A0A6H5JBQ5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ5_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 7.520e-21
Identity = 53/151 (35.10%), Postives = 83/151 (54.97%), Query Frame = 3 
Query:  996 HVNILEVHSMFDRSPCLALALECGACDMHAALNDQMLSYAEELDCIGDAATGLGHCHDNGVVVCDLKPANV-ILVYNGGRYTAKLADFGLACGRGQNRPARWGTPGFLAHEAVSEDTVAEPSADIVSLGAMATIVALKPMSREGNVFAHKV 1445
            H NI +V ++    P + + +E G CD    L    +    ++  + DAA GL H HD+G++  D+K AN+ ++V   G  + K+ADFGL C +G+  P+R GTPG++  E V     A P  D+ S G +     ++P  RE N+F H+V
Sbjct:    2 HPNIPKVLAINSALPSMPILMELGFCDTVDVLESTDVPMPHKMGILYDAACGLAHIHDDGMIHRDIKAANIGVMVNEDGSASGKVADFGLTCEKGEATPSRTGTPGYIPSELVWSAVEAGPENDVFSFGVLMLEAFIQPDLRENNMFLHRV 152
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BLAST of mRNA_L-elsbetiae_contig10541.532.1 vs. uniprot
Match: A0A6H5JND7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JND7_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 2.720e-19
Identity = 62/200 (31.00%), Postives = 96/200 (48.00%), Query Frame = 3 
Query:  846 EEQIGRGSFGGVTKATYTATNEKWAIKRAAEGSDPLFLVREMFAYLSLPWHVNILEVHSMFDRSPCLALALECGACDMHAALNDQMLSYAEELDCIGDAATGLGHCHDNGVVVCDLKPANVILVYN-GGRYTAKLADFGLACGRGQNRPARWGTPGFLAHEAVSEDTVAEPSADIVSLGAMATIVALKPMSREGNVFAHK 1442
            E  IG G +G V++  + +  E+ A+K  +                         EV ++    P + + +E G CD+   L    +S   ++  I DAA GL H HD G+V  D+K AN++++ N  G  T K+ADFGL C +G+  P R GTPG++  E V     A P  D+ S G +     ++P   E N+F H+
Sbjct:  470 ERVIGTGYYGRVSRVYHASLGEQLALKELS-------------------------EVFALNSALPAMPILMELGYCDLVDVLESVNVSLPNKIGIIYDAACGLQHIHDKGMVHRDIKAANILVMVNEDGDATGKVADFGLTCAQGERTPPRTGTPGYIPPELVWSGVEAGPENDVFSFGVLLLEAFIQPDLWENNMFVHR 644
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BLAST of mRNA_L-elsbetiae_contig10541.532.1 vs. uniprot
Match: D7G381_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G381_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 1.250e-14
Identity = 53/131 (40.46%), Postives = 70/131 (53.44%), Query Frame = 3 
Query: 1122 LDCIGDAATGLGHCHDNGVVVCDLKPANVILVYN-GGRYTAKLADFGLACGRGQNRPARWGTPGFLAHEAVSEDTVAEPSADIVSLGAMATIVALKPMSREGNVFAHKVFRKPEETTELYRLAAVEGNEYA 1511
            L  I DAA GL H HD G+V  D+K AN+I++ N  G  T K+ADFGL C +G+  P R GTPG++  E V     A P  D+ S G +     ++P   E N+F H      EE  E   L   +GN+ A
Sbjct:  500 LSIIYDAACGLQHIHDKGMVHRDIKAANIIVMVNEDGDATGKVADFGLTCEQGERTPPRTGTPGYIPPELVWSGVEAGPENDVFSFGVLMLETFIQPDLWEDNMFVHSFLLSDEERAEFADLG--QGNDQA 628
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BLAST of mRNA_L-elsbetiae_contig10541.532.1 vs. uniprot
Match: A0A2G7GPA5_9CHRO (Non-specific serine/threonine protein kinase n=2 Tax=Chroococcales TaxID=1118 RepID=A0A2G7GPA5_9CHRO)

HSP 1 Score: 75.5 bits (184), Expect = 1.670e-11
Identity = 51/186 (27.42%), Postives = 91/186 (48.92%), Query Frame = 3 
Query:  828 SDMLGVEEQIGRGSFGGVTKATYTATNEKWAIKRAAEGSDPLFLVREMFAYLSLPWHVNILEVHSM--FDRSPCLALALECGACDMHAALNDQMLSYAEELDCIGDAATGLGHCHDNGVVVCDLKPANVILVYNGGRYTAKLADFGLACGRGQNRPARWGTPGFLAHEAVSEDTVAEPSADIVSLG 1379
            S    + + +G+G FG V KA Y  T    A+K   +   P +       +L+   H NI+   ++   ++   L L    G    H   ++  ++  + L  I D  +GL + H +G+V CD+KP N++L+ N   +TA LADFG+A  +  +     G+P ++A E      +  P++D+ ++G
Sbjct:    2 SSQYQIIDLLGQGQFGRVFKAIYIPTGSFVALKELEKKRFPTYKFLRELNFLTQLQHPNIVACQAIEHTEKGRYLVLDYWDGGNLRHLMQSNNAITVVQSLKIIADILSGLEYAHTHGIVHCDIKPENILLLQNEVGWTACLADFGIAMSQ-SSIEINLGSPAYMAPEQFYGQFL--PTSDLYAVG 184
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BLAST of mRNA_L-elsbetiae_contig10541.532.1 vs. uniprot
Match: A0A2G8JE16_STIJA (Putative titin n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JE16_STIJA)

HSP 1 Score: 76.6 bits (187), Expect = 8.150e-11
Identity = 58/194 (29.90%), Postives = 96/194 (49.48%), Query Frame = 3 
Query:  831 DMLGVEEQIGRGSFGGVTKATYTATNEKWAIKRAAEGSDPLFLVREMFAYLSLPWHVNILEVHSMFDRSPCLALALEC---GACDMHAALNDQMLSYAEELDCIGDAATGLGHCHDNGVVVCDLKPANVILVYNGGRYTAKLADFGLACGRGQNRPAR--WGTPGFLAHEAVSEDTVAEPSADIVSLGAMATIV 1397
            D   + E+IGRGS+G V +AT  AT + WA K          L++     +    H  IL++H +F+    + + +E    G         + +L+  E ++ +     G+ H H+  +V  D+KP NV+L  +      KL DFGL+     + P +  +GTP F+A E V+ + V  P+ D+ SLG +A I+
Sbjct: 1171 DYYDIHEEIGRGSYGVVYRATEKATKKTWAAKFIKCTPAEKELIKREIDVMKKLHHRRILQLHEVFETEDEMIMIIEFLTGGELFDRIVDENHILTEPEIVEYMRQVCEGMKHMHEKHIVHLDMKPENVML-RDRTSDDLKLIDFGLSREIDPDEPIKVMFGTPEFVAPEVVNYEPVGLPT-DVWSLGVLAYIM 1362
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BLAST of mRNA_L-elsbetiae_contig10541.532.1 vs. uniprot
Match: A0A2V7TZ11_9BACT (Protein kinase domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7TZ11_9BACT)

HSP 1 Score: 74.7 bits (182), Expect = 1.900e-10
Identity = 66/191 (34.55%), Postives = 95/191 (49.74%), Query Frame = 3 
Query:  843 VEEQIGRGSFGGVTKATYTATNEKWAIKRAA--EGSDPLF---LVREMFAYLSLPWHVNILEVHSMFDRS--PCLALALECGACDMHAALNDQM-LSYAEELDCIGDAATGLGHCHDNGVVVCDLKPANVILVYNGGRYTAKLADFGLACGRGQNRPARW-GTPGFLAHEAVSEDTVAEPSADIVSLGAMA 1388
            V++ IGRGS G V +A       K A+K  A  E   P      VRE  A   L  H NI+ V+ + +    P +A+    G  D+   + ++  L    ++D +     GL H HDNG+V CD+KPANV +   G     K+ DFG+A  +   R  +  GTP ++A E V E    +  ADI S+GA+A
Sbjct:   15 VQKIIGRGSMGTVYEALDPVFQRKVALKTVAPRESDGPELKARFVREAQAAGRLQ-HRNIVTVYDVGEEKGQPYIAMEFVEGI-DLERVIQEKRPLPLEWKIDVLRQICEGLAHAHDNGIVHCDIKPANVRVSAEG---EVKIVDFGIALLQASTRAGQHAGTPHYMAPEQV-EGKAVDRRADIFSVGAIA 199
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BLAST of mRNA_L-elsbetiae_contig10541.532.1 vs. uniprot
Match: A0A5B8MYZ8_9CHLO (Calcium-dependent protein kinase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYZ8_9CHLO)

HSP 1 Score: 74.3 bits (181), Expect = 2.870e-10
Identity = 61/198 (30.81%), Postives = 100/198 (50.51%), Query Frame = 3 
Query:  843 VEEQIGRGSFGGVTKATYTATNEKWAIKRAAEG----SDPLFLV-REMFAYLSLPWHVNILEVHSMFDRSPCLALALE-CGACDMHAALNDQMLSYAEE--LDCIGDAATGLGHCHDNGVVVCDLKPANVILVYNGGRYTAKLADFGLA-----CGRGQNRPARWGTPGFLAHEAVSEDTVAEPSADIVSLGAMATIV 1397
            +++Q+G GSFG    A    T ++ A+K   +     +D +  V RE+     L  H NI+E +  F+    + +A+E C   +++ A+ ++  +Y+E+     I      L HCH+NG+V CD+KP N  L  N  R   K  DFGL+      GR   +P   GT  ++A E +  +    P AD+ SLG +A ++
Sbjct:  193 IKDQLGEGSFGRTYGALDKGTGQEIALKILPKSMISCADSIEDVDREVEIMKQLSGHKNIIEFYEAFEDKDTVFIAMEVCRGGELYDAVQERKGNYSEKEAASIIMQILKVLAHCHNNGIVYCDVKPEN-FLYLNEDRKVIKAIDFGLSRHFTPLGRALRKPR--GTAYYVAPEVMRFEY--GPEADMWSLGVIAYLL 385
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BLAST of mRNA_L-elsbetiae_contig10541.532.1 vs. uniprot
Match: UPI000D1CACF1 (mitogen-activated protein kinase 4-like n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CACF1)

HSP 1 Score: 72.0 bits (175), Expect = 4.610e-10
Identity = 65/189 (34.39%), Postives = 94/189 (49.74%), Query Frame = 3 
Query:  855 IGRGSFGGVTKATYTATNEKWAIKRAAEGSDPLFLVREMFAYLSLPWHVN--ILEVHSM-FDR------SPCLALALECGACDMHAALNDQMLSYAEELDC--IGDAATGLGHCHDNGVVVCDLKPANVILVYNGGRYTAKLADFGLACGRGQNRPARW---GTPGFLAHEAVSEDTVAEPSADIVSLG 1379
            +G GS G V KAT  +  +++AIK  + G       +E+   L     VN  +++V  + +D       +P   + +E  AC +     D  + +AE          A GL   H NGV+ CD+KPAN++L        AKLADFGLAC    +RP      GTPGF+A E + E  +  P+AD+ SLG
Sbjct:   48 LGCGSGGVVFKATRRSDGQEFAIKTVSGGGS-----KEVRLMLKAGDRVNDGVMKVKDLHYDEKRGEGGNPKTHIVMELRACSL-----DLGVKFAEPTTARMFFTVAKGLREIHRNGVIHCDIKPANILLSRE---LDAKLADFGLACDA--HRPWEMDFVGTPGFMAPEVMFEG-IYTPAADVWSLG 220
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10541.532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4G8_ECTSI3.100e-9250.30Serine/threonine protein kinase n=1 Tax=Ectocarpus... [more]
D7G236_ECTSI9.960e-8850.00Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5JBQ5_9PHAE7.520e-2135.10Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5JND7_9PHAE2.720e-1931.00Protein kinase domain-containing protein n=1 Tax=E... [more]
D7G381_ECTSI1.250e-1440.46N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A2G7GPA5_9CHRO1.670e-1127.42Non-specific serine/threonine protein kinase n=2 T... [more]
A0A2G8JE16_STIJA8.150e-1129.90Putative titin n=1 Tax=Stichopus japonicus TaxID=3... [more]
A0A2V7TZ11_9BACT1.900e-1034.55Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A5B8MYZ8_9CHLO2.870e-1030.81Calcium-dependent protein kinase n=1 Tax=Chloropic... [more]
UPI000D1CACF14.610e-1034.39mitogen-activated protein kinase 4-like n=2 Tax=Se... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10541contigL-elsbetiae_contig10541:1722..6534 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score305.1
Seed ortholog evalue4.7e-80
Seed eggNOG ortholog2880.D7G4G8
Preferred nameUHMK1
KEGG koko:K08829,ko:K08877
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000243,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005737,GO:0005794,GO:0006417,GO:0006446,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007049,GO:0007050,GO:0007275,GO:0007399,GO:0008144,GO:0008150,GO:0008152,GO:0008187,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0012505,GO:0016043,GO:0016301,GO:0016310,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018105,GO:0018193,GO:0018209,GO:0019222,GO:0019538,GO:0019899,GO:0022008,GO:0022402,GO:0030030,GO:0030154,GO:0030182,GO:0030424,GO:0030425,GO:0030554,GO:0030628,GO:0031175,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032386,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032838,GO:0032839,GO:0032879,GO:0032880,GO:0032991,GO:0033157,GO:0034248,GO:0034250,GO:0035639,GO:0035770,GO:0036002,GO:0036094,GO:0036211,GO:0036464,GO:0036477,GO:0042995,GO:0043005,GO:0043021,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044463,GO:0044464,GO:0044877,GO:0045727,GO:0045786,GO:0045948,GO:0046777,GO:0046822,GO:0046825,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051049,GO:0051171,GO:0051173,GO:0051223,GO:0051246,GO:0051247,GO:0051726,GO:0060255,GO:0060341,GO:0065007,GO:0070013,GO:0070201,GO:0071004,GO:0071010,GO:0071598,GO:0071704,GO:0071840,GO:0080090,GO:0089701,GO:0090087,GO:0097159,GO:0097367,GO:0097447,GO:0097458,GO:0099568,GO:0120025,GO:0120036,GO:0120038,GO:0120111,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1903827,GO:1990904,GO:2000112
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759
EC2.7.11.1,2.7.11.22
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001
Exons8
Model size1649
Cds size1140
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815277.9775586-UTR-L-elsbetiae_contig10541:1721..22301622815277.9775586-UTR-L-elsbetiae_contig10541:1721..2230Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10541 1722..2230 +
1691682812.6418874-UTR-L-elsbetiae_contig10541:1721..22301691682812.6418874-UTR-L-elsbetiae_contig10541:1721..2230Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10541 1722..2230 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815277.993171-CDS-L-elsbetiae_contig10541:2230..22631622815277.993171-CDS-L-elsbetiae_contig10541:2230..2263Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 2231..2263 +
1691682812.6555152-CDS-L-elsbetiae_contig10541:2230..22631691682812.6555152-CDS-L-elsbetiae_contig10541:2230..2263Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 2231..2263 +
1622815278.0049517-CDS-L-elsbetiae_contig10541:2604..30001622815278.0049517-CDS-L-elsbetiae_contig10541:2604..3000Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 2605..3000 +
1691682812.6659877-CDS-L-elsbetiae_contig10541:2604..30001691682812.6659877-CDS-L-elsbetiae_contig10541:2604..3000Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 2605..3000 +
1622815278.0164094-CDS-L-elsbetiae_contig10541:3473..35201622815278.0164094-CDS-L-elsbetiae_contig10541:3473..3520Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 3474..3520 +
1691682812.6853209-CDS-L-elsbetiae_contig10541:3473..35201691682812.6853209-CDS-L-elsbetiae_contig10541:3473..3520Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 3474..3520 +
1622815278.0301137-CDS-L-elsbetiae_contig10541:3801..39421622815278.0301137-CDS-L-elsbetiae_contig10541:3801..3942Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 3802..3942 +
1691682812.7097287-CDS-L-elsbetiae_contig10541:3801..39421691682812.7097287-CDS-L-elsbetiae_contig10541:3801..3942Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 3802..3942 +
1622815278.0424385-CDS-L-elsbetiae_contig10541:4436..45791622815278.0424385-CDS-L-elsbetiae_contig10541:4436..4579Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 4437..4579 +
1691682812.7175994-CDS-L-elsbetiae_contig10541:4436..45791691682812.7175994-CDS-L-elsbetiae_contig10541:4436..4579Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 4437..4579 +
1622815278.0544817-CDS-L-elsbetiae_contig10541:4989..51621622815278.0544817-CDS-L-elsbetiae_contig10541:4989..5162Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 4990..5162 +
1691682812.7275407-CDS-L-elsbetiae_contig10541:4989..51621691682812.7275407-CDS-L-elsbetiae_contig10541:4989..5162Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 4990..5162 +
1622815278.0675428-CDS-L-elsbetiae_contig10541:5888..59661622815278.0675428-CDS-L-elsbetiae_contig10541:5888..5966Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 5889..5966 +
1691682812.7372596-CDS-L-elsbetiae_contig10541:5888..59661691682812.7372596-CDS-L-elsbetiae_contig10541:5888..5966Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 5889..5966 +
1622815278.1155798-CDS-L-elsbetiae_contig10541:6405..65341622815278.1155798-CDS-L-elsbetiae_contig10541:6405..6534Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 6406..6534 +
1691682812.7471437-CDS-L-elsbetiae_contig10541:6405..65341691682812.7471437-CDS-L-elsbetiae_contig10541:6405..6534Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10541 6406..6534 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10541.532.1prot_L-elsbetiae_contig10541.532.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10541 2231..6534 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10541.532.1

>prot_L-elsbetiae_contig10541.532.1 ID=prot_L-elsbetiae_contig10541.532.1|Name=mRNA_L-elsbetiae_contig10541.532.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=380bp
MAAEERTRELETTVFRMAQEAAAMQAAAAAAAAATAAAAAAAAAAPVPVI
GAALIPQHQGGGGLQPELPLDFSNRIRQWSSMECHDAFTMKKQAELDRQL
LALQPGSDMLGVEEQIGRGSFGGVTKATYTATNEKWAIKRAAEGSDPLFL
VREMFAYLSLPWHVNILEVHSMFDRSPCLALALECGACDMHAALNDQMLS
YAEELDCIGDAATGLGHCHDNGVVVCDLKPANVILVYNGGRYTAKLADFG
LACGRGQNRPARWGTPGFLAHEAVSEDTVAEPSADIVSLGAMATIVALKP
MSREGNVFAHKVFRKPEETTELYRLAAVEGNEYARQLEAITNRTMAKPSS
FFVEKITRPCLLNRMPGTAVVSSRTTSAV*
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mRNA from alignment at L-elsbetiae_contig10541:1722..6534+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10541.532.1 ID=mRNA_L-elsbetiae_contig10541.532.1|Name=mRNA_L-elsbetiae_contig10541.532.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4813bp|location=Sequence derived from alignment at L-elsbetiae_contig10541:1722..6534+ (Laminarionema elsbetiae ELsaHSoW15)
CAAGTGCCTTCTGATCTGACATGGTGGTCAACACTCCCCCATAGCGTGTG
ATTGCTATTCTCGCACTACAGCAGTATCCCATTGAACGATGATGCCTGTG
GTCTCCGATGGTTGTGACGCGCAGGACGACTCCTCCTTATTGTTCTTTGC
GATCGGCCCACCGGTAGTCCAGGGTAGCTTCATCATTTTCTTGCTCTCCT
CACTTGCCTTTCTCGCCTATTCAGAGAACAACGTACGACAGTCCACGGCA
TCATGTCGTGCTTTTCTTCATGCAACCGTATCTCTCCCGCCCTTGCCACT
GCCCACTTGACGATTGTGCTGCCATGTAATAGGCTTACAGGAACACCCTG
GAATGGAACCTGGGAAACCTCCGTGGCCTGCTCGACGCCGAGTGCGCCTC
CGCCGTGACGGAGAGGCAACGGGCAGACGTGGCCGCTGCGCAGGCAGAGC
ATGCCAACGACATCCTACGGGTGGCCGCAGAGAGGACGCGACATGCTGAG
CAAGAGGCAATGGCGGCCGAAGAGCGCACGAGGGAGCTTGAGGTGTGGTT
GAAAATGTAGCTTTGCCATGGTTACCATATTCTCTCGACACGCTGTATAT
GCCGAAGGATGAGGTGGGATAGGGTGGTCGGTTGGGGCAGATGTCAAGCA
CAACCATTAGATGCACTTGGTGCTGCAAGGCCTACTACGAGAGCGACGAA
CATCCGATCTCGGCCATGTCACACGTCGCACCACCGTCTAGCCACGACTA
AAAGTGTGGCACCACCGAACAACCCACGCTTTACCGTATATCGCGCGCGC
GCACGTTCGCTGCGTGCTTCACCCCTACCTTGTTACTGCTGTTCGATGTG
CCGTGTGGTCTGTGTGCCCTTCCATGTCGGCAGACCACCGTGTTCCGCAT
GGCGCAAGAGGCGGCAGCGATGCAAGCCGCCGCAGCCGCCGCAGCCGCAG
CCACCGCCGCAGCCGCTGCCGCCGCCGCCGCTGCCCCAGTACCGGTAATC
GGCGCCGCTTTGATCCCGCAGCACCAGGGTGGGGGCGGCCTTCAACCGGA
GCTTCCCCTCGACTTCTCGAACCGCATTCGCCAGTGGAGCTCGATGGAGT
GCCACGACGCCTTTACAATGAAGAAGCAGGCAGAACTTGACCGCCAGCTG
CTTGCTCTCCAGCCAGGGAGCGACATGCTGGGCGTCGAGGAGCAGATCGG
GCGAGGATCCTTCGGTGGCGTGACGAAAGCCACCTACACGGCGACCAATG
AGAAGTGGGCCATCAAGAGGGCCGCGGAGGTGAGCGAGTTTGGTGTTCTG
AGTACAATAGACGACGAGCAGTTTGCACCCCGCTGTCCATTTCATTGTTT
TGAACCGGGGCTATCGCTGCTGCTATTGCTGCTGCTATTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCTGTCTTGCATAGGCAATCTAATCTTGGCTTAGCC
CGTGACCCGTTCAAATTATACTTGGCGGTTTTTGCTGATGCCACGAGGTT
CATTTTTTCCCGGATTGCGAGGGGACCCTTCTCGACGAAGCCGCTCTGTG
TATGTAGTCATCGTGCCTGTGGTGTCCCAACCAGCGACATTCGAAACAAC
ACGCTGATATCATCGTGTGCACATTGATATCCACCCATCCATCCCGTTGG
CCTACCTCGCTTGCCCCCTCCCCCGGTGCCACGAACCAACCCTGTTCTGC
AGGGGTCGGACCCGCTGTTCCTCGTGCGGGAGATGTTCGCGTACCTCAGG
TGAGGTTTGTCGCTGCACACTCGTTTATGTATGTGCCTCGCTTGCGTACC
ATCCCCATTGCATACATCACATCACATCACACCCACTCTTGGCAGCTTCC
ACCAAGACGGTCCGTCGTGCGTGTTTGGAGTTGATCGTCGACTATTGTTG
CGTTGCTCTCGTGTGTTGACGCCGAAAACGAAACCTGCATCGCTGTGTTT
GACCTTTTTCGCGCGTTGGCCCTGCGCTGTGTGCGTTATTCCTTCCCGTC
TGGGCGCTCCTCCGTCACACTTCCCCCCAGCCTTCCTTGGCACGTCAACA
TCTTGGAGGTTCACTCCATGTTCGACCGCAGCCCTTGCCTTGCCTTGGCG
CTCGAGTGCGGCGCCTGCGACATGCACGCCGCGCTCAATGACCAGATGCT
CTCCTACGCGGAGGAGTTAGAGTGAGTCAAGAACAGTCAAAGGCTTAGAA
TAATGGATGGTAATCAAGTGTTTACATAGTGTTGGAGTTTAAAGCTGGTG
TATTAAGCGAATCGTCTGCGGCCAGTTGGGTTGAGGAAAGCACGTAGTAG
TAGACTCCCATGACAGCTACATATCTACCCTGGCCCCCGTCCTTCATACC
CACGACCGACAAGAAGCTTTCGTGTCGCTGCTATGTATGCTCTGCACAAA
CAAATGCAGCTTATTGTATCACTCACGCGCGCAAACCAGTGTTTCTTGGC
CCGCTACGCAAATGCTACTTGCTACTTGTAAACCGGGCGTGTGCGCCGGA
TGCTACTACATACGAATATTTATTGAGACGAATGTTGGGATATTTATATG
AACTGCAAAGTAGACTATGTACGGTATATACCTCCCATGTACGTCTTCAC
TTGGATTGCCCTTGCCTGCTTGCACGACCCTTTCCCTCTCCGCTCCCCGC
CCGCGGTCCGTCCAGCTGCATCGGTGACGCCGCCACGGGCCTCGGGCACT
GCCATGATAATGGCGTCGTCGTGTGCGACCTGAAACCCGCCAACGTCATC
CTGGTCTACAACGGGGGTCGGTACACGGCCAAACTCGCAGACTTCGGGCT
GGCGTGCGGTGAGTGTGCGGAGACTCGTGCATTCACAACGATGACGCCAA
TGCGTCGTAGTGGATATCACACGCCACACGCCGTGTTGCTGACAGTGCGG
AGGTGTTGCGTGATCGGAGATTCTGGTTGATCTCTGGAGCTGACTACCTT
TCGCGACCCGCTTGTGATCTGCCTCGAGCTCCCGGGCACCCTGAAAACCC
ATAGTTTCTTTGAGATCGATCATACGTGGGTCAAACAGTGCGCAGCACGG
TCGACCCCTAAGTCCAAGATAAAGATACCACCACAGAGTCGGCTCGTTGT
GTTTTCATACCGGTAGGCGTTGGTGTGTCATTGCATCATTTACATCATCT
CGATAGACAGCCTCCCCCGCAAACCCTCGTTGCATGCTTCCCGTCTTTCT
GCCTCCCTCAAACGCCAGGACGCGGGCAGAATAGGCCGGCACGGTGGGGC
ACCCCCGGCTTTCTGGCGCACGAGGCTGTGTCCGAGGACACAGTGGCAGA
GCCTAGTGCGGATATTGTGTCCTTGGGCGCCATGGCGACGATCGTCGCCC
TTAAGCCGATGTCTCGCGAGGGGAACGTCTTCGCTCACAAGGTAAGACTA
CGGGTGGATCTGTTTTGTTCGTCTGCCGCAGCTTTGGAAGCCGGTCTTGG
GGGGAACGACTCTTCTACTACTCCTACATACATATCATACATCGTATCCT
GCAGTTAGCCCAGCGGAGCAGGGTTTGTCAACTTTGAAAACTTAGTTTCC
GATCTAATCGCTTGGCACCTACATTCCAGAGTAGTTTCAACAGCATTTTC
CATCAACAGAGGTTTAGCGTGGCCCGTGCAGTGGGCGGCTGTCCCAAGAA
ACTCGAAATTATCGAGGGCGACCTCAGAAGGGAAAGGTACAGTCAAACAA
TATCACCGTCGTGGTGTTGTGCTGCGGCTGGTGACACGCAGTGGGAGCAC
CGCGTGTTAGTGGTGGTCACGTGGTCACGTGAATCCCACCCCGGTGTCTA
TCTTTGTATGTAGAGTCTGGTTTTGTCAACACCGCTAGGATACGTCCAGC
CGCGCAGCCCGTGTTCTTTCCGACTTACATAGACTTATCGAGAACGGCGG
CTGTGCTCCTCTGACCGGTCCTGCAGACATCACTTACCCCTTACCTGGGT
CTACGCCGAGAATCGTTTGCCAAGCTCTCTCTATCAAATACCCCCCCTTC
AACGAGCCTTGCGGTTGTTTCATGTCTAGTCTATGTACCTATTTGGTTGT
GGATCACGCGTATGTGTCTTTTCCTCGCCGACACGGACTTGTCGACTGGG
ATTGGACCATAATGCAGGTGTTTCGGAAGCCCGAAGAGACCACGGAGCTC
TACCGGCTGGCGGCGGTTGAGGGCAACGAGTACGCCCGACAGTTGGTAGG
TCAAGACGTTTGCACTCGACAGTCACCCGCCAGTTGGACAGAGATAGCTA
TATTTACTTGAAAATTGAGTAGAGGTCCTGCTTCTTGCCTGCACGGCCAT
TGTTGGTGTTGCCGCTGTTTGTTGCAGTTGTCGATCTCTCTCTGTGTTTT
CGACTTTCACCACAAGAACACGCTTTCGGTGCTTTACGTCGTGACGGGGT
GCTGGATCCGGCTTCAACTGTACGCAGTCGATGGGATGCAGCTGGCGCTT
CATCGGCGATGCTGAAATATCGATTAATCAGCGCACGCGGTGTTGTGTCG
ATACACAAACCTGCTGTATAGGTCTGCAGCTATGTAAGCTGACAGCGCCT
TGTTCTTTTTTGCCCGCAACCTCAAATGTCCCCGTTTGCGCTGCTTCGTG
GGTTGTATTGGTACATGTCTGTCACTCACTGCAGGAGGCGATCACCAACC
GCACCATGGCCAAGCCCAGCTCTTTCTTCGTCGAGAAGATCACACGCCCG
TGTCTTCTCAACAGGATGCCCGGTACCGCAGTGGTGAGCTCCAGGACCAC
CAGCGCAGTGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10541:1722..6534+

>mRNA_L-elsbetiae_contig10541.532.1 ID=mRNA_L-elsbetiae_contig10541.532.1|Name=mRNA_L-elsbetiae_contig10541.532.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2280bp|location=Sequence derived from alignment at L-elsbetiae_contig10541:1722..6534+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGCCGAAGAGCGCACGAGGGAGCTTGAGATGGCGGCCGAAGAGCG
CACGAGGGAGCTTGAGACCACCGTGTTCCGCATGGCGCAAGAGGCGGCAG
CGATGCAAGCCGCCGCAGCCGCCGCAGCCGCAGCCACCGCCGCAGCCGCT
GCCGCCGCCGCCGCTGCCCCAGTACCGGTAATCGGCGCCGCTTTGATCCC
GCAGCACCAGGGTGGGGGCGGCCTTCAACCGGAGCTTCCCCTCGACTTCT
CGAACCGCATTCGCCAGTGGAGCTCGATGGAGTGCCACGACGCCTTTACA
ATGAAGAAGCAGGCAGAACTTGACCGCCAGCTGCTTGCTCTCCAGCCAGG
GAGCGACATGCTGGGCGTCGAGGAGCAGATCGGGCGAGGATCCTTCGGTG
GCGTGACGAAAGCCACCTACACGGCGACCAATGAGAAGTGGGCCATCAAG
AGGGCCGCGGAGACCACCGTGTTCCGCATGGCGCAAGAGGCGGCAGCGAT
GCAAGCCGCCGCAGCCGCCGCAGCCGCAGCCACCGCCGCAGCCGCTGCCG
CCGCCGCCGCTGCCCCAGTACCGGTAATCGGCGCCGCTTTGATCCCGCAG
CACCAGGGTGGGGGCGGCCTTCAACCGGAGCTTCCCCTCGACTTCTCGAA
CCGCATTCGCCAGTGGAGCTCGATGGAGTGCCACGACGCCTTTACAATGA
AGAAGCAGGCAGAACTTGACCGCCAGCTGCTTGCTCTCCAGCCAGGGAGC
GACATGCTGGGCGTCGAGGAGCAGATCGGGCGAGGATCCTTCGGTGGCGT
GACGAAAGCCACCTACACGGCGACCAATGAGAAGTGGGCCATCAAGAGGG
CCGCGGAGGGGTCGGACCCGCTGTTCCTCGTGCGGGAGATGTTCGCGTAC
CTCAGGGGTCGGACCCGCTGTTCCTCGTGCGGGAGATGTTCGCGTACCTC
AGCCTTCCTTGGCACGTCAACATCTTGGAGGTTCACTCCATGTTCGACCG
CAGCCCTTGCCTTGCCTTGGCGCTCGAGTGCGGCGCCTGCGACATGCACG
CCGCGCTCAATGACCAGATGCTCTCCTACGCGGAGGAGTTAGACCTTCCT
TGGCACGTCAACATCTTGGAGGTTCACTCCATGTTCGACCGCAGCCCTTG
CCTTGCCTTGGCGCTCGAGTGCGGCGCCTGCGACATGCACGCCGCGCTCA
ATGACCAGATGCTCTCCTACGCGGAGGAGTTAGACTGCATCGGTGACGCC
GCCACGGGCCTCGGGCACTGCCATGATAATGGCGTCGTCGTGTGCGACCT
GAAACCCGCCAACGTCATCCTGGTCTACAACGGGGGTCGGTACACGGCCA
AACTCGCAGACTTCGGGCTGGCGTGCGCTGCATCGGTGACGCCGCCACGG
GCCTCGGGCACTGCCATGATAATGGCGTCGTCGTGTGCGACCTGAAACCC
GCCAACGTCATCCTGGTCTACAACGGGGGTCGGTACACGGCCAAACTCGC
AGACTTCGGGCTGGCGTGCGGACGCGGGCAGAATAGGCCGGCACGGTGGG
GCACCCCCGGCTTTCTGGCGCACGAGGCTGTGTCCGAGGACACAGTGGCA
GAGCCTAGTGCGGATATTGTGTCCTTGGGCGCCATGGCGACGATCGTCGC
CCTTAAGCCGATGTCTCGCGAGGGGAACGTCTTCGCTCACAAGGACGCGG
GCAGAATAGGCCGGCACGGTGGGGCACCCCCGGCTTTCTGGCGCACGAGG
CTGTGTCCGAGGACACAGTGGCAGAGCCTAGTGCGGATATTGTGTCCTTG
GGCGCCATGGCGACGATCGTCGCCCTTAAGCCGATGTCTCGCGAGGGGAA
CGTCTTCGCTCACAAGGTGTTTCGGAAGCCCGAAGAGACCACGGAGCTCT
ACCGGCTGGCGGCGGTTGAGGGCAACGAGTACGCCCGACAGTTGGTGTTT
CGGAAGCCCGAAGAGACCACGGAGCTCTACCGGCTGGCGGCGGTTGAGGG
CAACGAGTACGCCCGACAGTTGGAGGCGATCACCAACCGCACCATGGCCA
AGCCCAGCTCTTTCTTCGTCGAGAAGATCACACGCCCGTGTCTTCTCAAC
AGGATGCCCGGTACCGCAGTGGTGAGCTCCAGGACCACCAGCGCAGTGTA
GGAGGCGATCACCAACCGCACCATGGCCAAGCCCAGCTCTTTCTTCGTCG
AGAAGATCACACGCCCGTGTCTTCTCAACAGGATGCCCGGTACCGCAGTG
GTGAGCTCCAGGACCACCAGCGCAGTGTAG
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