mRNA_L-elsbetiae_contig1054.530.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1054.530.1 vs. uniprot
Match: A0A6H5JBU8_9PHAE (GT64 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBU8_9PHAE) HSP 1 Score: 494 bits (1273), Expect = 2.250e-169 Identity = 234/304 (76.97%), Postives = 263/304 (86.51%), Query Frame = 2 Query: 5 SSRLVASMQKRVLLVAVFLGPAIFLWIWHRLFAIDVSSALAESRGV-SSVEKTFTVRMNTYRRNDLLKRSAEHLASCDCVGRIQVVWSDQENPPPGMDLFTENTRKKVEFEVHDTNSLNHRFNATSPVSTEGVFSTDDDLEISCADLKFGFEAWQSSKMAMVGYSPRLVTRDPTTGRHSYRSWRVVRWNGVYNVILTKCCFMHRRHLITYTEEMTGAMLSYIDKHRNCEDIAMSVVVAKFHKTPPVWISGRVKEIGGDGISGLAHHFDARSDCVDFFAEQFGDMPLLESSKKVYPRRTGLLSWL 913 S ++ S+ KR +LV + P +F+ W LF+IDV + L E+ G SS+E TFTVRMNT+RRNDLLKRSAEHLASCDCVG+IQVVWSDQEN PP MDLFTE TR+KV FEVHDTNSL+HRFN TS + T+GVFSTDDDLEISCADLKFGFE W++S+ MVG+SPRLVTRDP TGRHSYRSWRVVRWNGVYNVILTKCCF+HR HL TY +EMT +L+YID+HRNCEDIAMSVVVAKFHKTPPVW+ GRVKEIGGDGISGLAHHFDARS+CVDFFAE+FGDMPLLESS KVYP TGLLSWL Sbjct: 46 SCSVLGSLLKRAVLVVGVVAPVMFILTWRHLFSIDVGAVLVENGGSGSSIENTFTVRMNTFRRNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRRKVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWVGGRVKEIGGDGISGLAHHFDARSNCVDFFAEEFGDMPLLESSVKVYPMHTGLLSWL 349
BLAST of mRNA_L-elsbetiae_contig1054.530.1 vs. uniprot
Match: A0A835YNL3_9STRA (Exostosin (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL3_9STRA) HSP 1 Score: 276 bits (707), Expect = 8.260e-86 Identity = 129/242 (53.31%), Postives = 166/242 (68.60%), Query Frame = 2 Query: 161 FTVRMNTYRRNDLLKRSAEHLASCDCVGRIQVVWSDQENPPPGMDLFTENTRKKVEFEVHDTNSLNHRFNATSPVSTEGVFSTDDDLEISCADLKFGFEAWQSSKMAMVGYSPRLVTRDPTTGRHSYRSWRVVRWNGVYNVILTKCCFMHRRHLITYTEEMTGAMLSYIDKHRNCEDIAMSVVVAKFHKTPPVWISGRVKEIGGDGISGLAHHFDARSDCVDFFAEQFGDMPLLESSKKVYP 886 FTVRMNT+RRND LKRS ++ A C V RIQ+VWSDQEN PP ++ F+ R+ +EFE+H T+SLN+RFNA SP TEGVFS DDD+ C DLKF + W+++ MVG+ PRLVTRD TG H YRSW WNG YN++LTK F+HR+HL Y + ML+Y+D HRNCEDIAMS+VVA+ + PP+W+ G ++E+G GIS H+ AR C+D FA+ G L + K P Sbjct: 2 FTVRMNTFRRNDDLKRSVDNYALCPAVTRIQIVWSDQENEPPPLNFFSPAARELIEFELHTTDSLNNRFNALSPPPTEGVFSVDDDMLFKCEDLKFAHQTWRAASETMVGFVPRLVTRDEETGEHRYRSWWFTWWNGAYNLVLTKAAFLHRKHLDAYMT-LPPKMLAYVDAHRNCEDIAMSMVVARDTRAPPLWVRGAIRELGAPGISSSGGHYRARCACLDAFAQVLGGTHLQLGTAKAVP 242
BLAST of mRNA_L-elsbetiae_contig1054.530.1 vs. uniprot
Match: A0A7N0THD0_KALFE (Glyco_transf_64 domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0THD0_KALFE) HSP 1 Score: 228 bits (580), Expect = 7.840e-66 Identity = 118/281 (41.99%), Postives = 173/281 (61.57%), Query Frame = 2 Query: 107 DVSSALAESRGVSSVEKTFTVRMNTYRRNDLLKRSAEHLASCDCVGRIQVVWSDQENPPPGMDLF-----TENTRK--KVE--FEVHDTNSLNHRFNATSPVSTEGVFSTDDDLEISCADLKFGFEAWQSSKMAMVGYSPRLVTRDPTT---GRHSYRSWRVVRWNGVYNVILTKCCFMHRRHLITYTEEMTGAMLSYIDKHRNCEDIAMSVVVAKFHKTPPVWISGRVKEIGGDGISGLAHHFDARSDCVDFFAEQFGDMPLLESSKKVYPRRTGLLSWL 913 D S +A+ +S+ K +T+ +NT++R DLLKRS H ASC + I +VWS+ P G+ F T N+RK KVE F++H +SLN+RF ++T+ VFS DDD+ C+ + F F WQS+ MVG+ PR+ D T+ G+ Y+ W V W G Y+++LTK F+H+++L YT ++ ++ YI K+RNCEDIAMS +VA +PP+W+ G++ EIG GIS L H + RS+CV++FA +FG MPL+ +S K R SWL Sbjct: 54 DESDPVAQ---LSASSKGYTLLINTWKRYDLLKRSVSHYASCSKIDSIHIVWSEPNPPSEGLKRFLSRVVTINSRKSRKVELKFDIHKEDSLNNRFKEIKDLTTDAVFSIDDDIIFPCSSVDFAFTVWQSAPDTMVGFVPRMHWIDQTSDTSGQFVYKGWWSVWWRGTYSMVLTKAAFLHKKYLKLYTNDLPSSIKEYITKNRNCEDIAMSFLVANVTGSPPIWVQGKINEIGSTGISSLGGHTEKRSECVNWFAAEFGRMPLVPTSLKAVDSRR---SWL 328
BLAST of mRNA_L-elsbetiae_contig1054.530.1 vs. uniprot
Match: A0A835YPP3_9STRA (Glucuronyl/N-acetylglucosaminyl transferase EXT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP3_9STRA) HSP 1 Score: 226 bits (576), Expect = 1.020e-65 Identity = 106/238 (44.54%), Postives = 145/238 (60.92%), Query Frame = 2 Query: 137 GVSSVEKTFTVRMNTYRRNDLLKRSAEHLASCDCVGRIQVVWSDQENPPPGMDLFTENTRKKVEFEVHDTNSLNHRFNATSPVSTEGVFSTDDDLEISCADLKFGFEAWQSSKMAMVGYSPRLVTRDPTTGRHSYRSWRVVRWNGVYNVILTKCCFMHRRHLITYTEEMTGAMLSYIDKHRNCEDIAMSVVVAKFHKTPPVWISGRVKEIG-GDGISGLAHHFDARSDCVDFFAEQFG 847 G K F+VR+NTY+RN+ LKRS E +A C V + +VWS+QEN PP +D F + R + E H NSLN+RF A + +TE VFS DDD+ C DL F F+ W+++K MVG+ PRLVT D TG+H YRSW V G YN++LTK F HR +L TY ++ +Y+D RNC+D+AM+ ++A PP+W+ ++G + IS HF R C+DFF Q G Sbjct: 33 GDGGAVKQFSVRVNTYKRNENLKRSVEVVAKCPSVASLTIVWSEQENDPPPLDFFAPHARPLISVEKHTVNSLNNRFRALTQPTTEAVFSMDDDVLFRCQDLAFAFDTWKAAKGTMVGFHPRLVTLDRATGQHRYRSWWYVWRTGAYNMVLTKAAFFHRDYLETYFSVLSDEARAYVDATRNCDDVAMAALIAHVSGAPPIWVEADTSDLGVTNAISASRDHFAERGRCLDFFVAQLG 270
BLAST of mRNA_L-elsbetiae_contig1054.530.1 vs. uniprot
Match: A0A1Q3AM02_CEPFO (Glyco_transf_64 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3AM02_CEPFO) HSP 1 Score: 215 bits (548), Expect = 3.820e-61 Identity = 106/263 (40.30%), Postives = 157/263 (59.70%), Query Frame = 2 Query: 140 VSSVEKTFTVRMNTYRRNDLLKRSAEHLASCDCVGRIQVVWSDQENPPPGMDLFT---------ENTRKKVEFEVHDTNSLNHRFNATSPVSTEGVFSTDDDLEISCADLKFGFEAWQSSKMAMVGYSPRLVTRDPTTGR---HSYRSWRVVRWNGVYNVILTKCCFMHRRHLITYTEEMTGAMLSYIDKHRNCEDIAMSVVVAKFHKTPPVWISGRVKEIGGDGISGLAHHFDARSDCVDFFAEQFGDMPLLESSKKVYPRR 892 +S+ K F + MNT++R+DLLK+S H +SC + I +VWS+ P + F + R K++F++++ +SLN+RF + T+GVFS DDD+ C+ ++F F+ WQS+ MVG+ PR D + G + Y W V W G Y+++L+K F H+++L YT EM ++ YI K+RNCEDIAMS +VA PP+W+ G++ EIG GIS L H D RS CV+ FA +FG MPL+ +S K R Sbjct: 63 LSTPRKGFAIVMNTWKRDDLLKQSLAHYSSCGGLDSIHIVWSEPTLPSDSLKEFLYHILQSNSRDGRRVKLKFDINEEDSLNNRFKEIKDLETDGVFSIDDDVIFPCSTVEFAFKVWQSAPDTMVGFVPRRHWIDKSKGNTNWYVYGGWWSVWWTGTYSMVLSKAAFFHKKYLSLYTNEMPASIKEYITKNRNCEDIAMSFLVANETNAPPIWVKGKIFEIGSTGISSLGGHSDMRSQCVNIFAAEFGRMPLVTTSVKAVDSR 325
BLAST of mRNA_L-elsbetiae_contig1054.530.1 vs. uniprot
Match: A0A6J1JG04_CUCMA (glycosyltransferase family 64 protein C4 n=4 Tax=Cucurbita TaxID=3660 RepID=A0A6J1JG04_CUCMA) HSP 1 Score: 214 bits (544), Expect = 1.380e-60 Identity = 106/263 (40.30%), Postives = 156/263 (59.32%), Query Frame = 2 Query: 143 SSVEKTFTVRMNTYRRNDLLKRSAEHLASCDCVGRIQVVWSDQENPPPGMDLFTENTRK---------KVEFEVHDTNSLNHRFNATSPVSTEGVFSTDDDLEISCADLKFGFEAWQSSKMAMVGYSPRLVTRDPTT---GRHSYRSWRVVRWNGVYNVILTKCCFMHRRHLITYTEEMTGAMLSYIDKHRNCEDIAMSVVVAKFHKTPPVWISGRVKEIGGDGISGLAHHFDARSDCVDFFAEQFGDM-PLLESSKKVYPRR 892 S+ K + + MNT++R+DLLK+S H +C V I +VWS+ + PP + F + T K K+ FE+++ +SLN+RF ++T+ +FS DDD+ +C+ L+F F WQS+ MVG+ PR+ D GR+ Y W V W G Y+++L+K F H ++L YT M ++ +Y+ K+RNCEDIAMS VVA PPVW+ GR+ EIG GIS L H + R CV+ F E++G M PL+ S+ K R Sbjct: 61 STPRKRYAILMNTWKRHDLLKQSVSHYTTCMGVESIHIVWSEPDPPPDSLVAFLQRTVKENSRNDREIKLRFEMNEEDSLNNRFKEIKDLNTDAIFSVDDDVIFACSTLEFAFTVWQSASETMVGFVPRMHWIDQAKEEMGRYIYGGWWSVWWTGTYSMVLSKAAFFHSKYLGIYTHHMPASIRNYVTKNRNCEDIAMSFVVANVSGAPPVWVKGRIYEIGSGGISSLGGHSERRGKCVNTFVEEYGGMMPLVPSTVKAVDGR 323
BLAST of mRNA_L-elsbetiae_contig1054.530.1 vs. uniprot
Match: A0A8J5KJ90_ZINOF (Glyco_transf_64 domain-containing protein n=3 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5KJ90_ZINOF) HSP 1 Score: 213 bits (542), Expect = 4.030e-60 Identity = 108/290 (37.24%), Postives = 164/290 (56.55%), Query Frame = 2 Query: 86 WHRLFAIDVSSALAESRGVSSVEKTFTVRMNTYRRNDLLKRSAEHLASCDCVGRIQVVWSDQENPPPGM-----DLFTENTRK----KVEFEVHDTNSLNHRFNATSPVSTEGVFSTDDDLEISCADLKFGFEAWQSSKMAMVGYSPRL-----VTRDPTTGRHSYRSWRVVRWNGVYNVILTKCCFMHRRHLITYTEEMTGAMLSYIDKHRNCEDIAMSVVVAKFHKTPPVWISGRVKEIGGDGISGLAHHFDARSDCVDFFAEQFGDMPLLESSKKVYPRRTGLLSWL 913 W RL + SS+ G +TV +NT++RNDLLK+S H +SC V I +VWS+ + P + + +N++ ++F++++ +SLN+RF T + T+ VFS DDD+ C+ + F WQS+ MVG+ PR+ TRD + Y W V W G Y+++L+K F H+++L YT M ++ Y+ K+RNCEDIAMS +VA PP+W+ GR+ EIG GIS L H D R+ C++ F +G+MPL+ ++ KV R SWL Sbjct: 62 WRRLLRYETSSSTPSGSG-------YTVLINTWKRNDLLKQSVSHYSSCAGVESIHIVWSEPDRPSDSLRESLWQVAQQNSKSCEGMDLKFDLNEEDSLNNRFRDTKGLKTDAVFSIDDDVLFPCSSMDLAFRVWQSAPNTMVGFVPRMHWLDSKTRDNNREYYKYGGWWSVWWTGTYSMVLSKASFFHKKYLDLYTNHMPKSIRQYVTKYRNCEDIAMSFLVANATGAPPIWVKGRIFEIGSSGISSLGGHSDKRTHCLNLFTNLYGEMPLVATNMKVIDSRH---SWL 341
BLAST of mRNA_L-elsbetiae_contig1054.530.1 vs. uniprot
Match: A0A1U8A5H3_NELNU (glycosyltransferase family 64 protein C4 isoform X1 n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8A5H3_NELNU) HSP 1 Score: 213 bits (541), Expect = 4.360e-60 Identity = 106/271 (39.11%), Postives = 161/271 (59.41%), Query Frame = 2 Query: 131 SRGVSSV-EKTFTVRMNTYRRNDLLKRSAEHLASCDCVGRIQVVWSDQENPPPGMDLFTENTRK---------KVEFEVHDTNSLNHRFNATSPVSTEGVFSTDDDLEISCADLKFGFEAWQSSKMAMVGYSPRLVTRDPTTGR-------HSYRSWRVVRWNGVYNVILTKCCFMHRRHLITYTEEMTGAMLSYIDKHRNCEDIAMSVVVAKFHKTPPVWISGRVKEIGGDGISGLAHHFDARSDCVDFFAEQFGDMPLLESSKKVYPRR 892 S G SSV K +T+ +NT++RNDLLK+S H ASC + I +VWS+ + P + F ++T + +++F++H +SLN+RF + T+ +FS DDD+ C ++F F WQS+ MVG+ PR+ D + G ++Y W V W G Y+++L+K F H+++L YT E+ ++ YI K+RNCEDIAMS +VA PP+W+ G++ EIG GIS L H + RS CV+ FA ++G MPL+ +S K R Sbjct: 58 SIGRSSVPRKGYTILINTWKRNDLLKQSISHYASCRGLDSIHIVWSEPDPPSNSLHEFLQHTIRSKSKDGRNIELKFDIHKEDSLNNRFKEIEDLKTDAIFSIDDDVIFPCTSVEFAFTVWQSAPETMVGFVPRIHWVDQSVGLEKGGKDYYTYGGWWSVWWMGTYSMVLSKAAFFHKKYLYLYTHEIPASIREYITKNRNCEDIAMSFLVANVTGAPPIWVKGKIFEIGSTGISSLGGHSERRSQCVNRFAAEYGRMPLVSTSVKAVDSR 328
BLAST of mRNA_L-elsbetiae_contig1054.530.1 vs. uniprot
Match: UPI0019D67716 (glycosylinositol phosphorylceramide mannosyl transferase 1-like n=2 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D67716) HSP 1 Score: 213 bits (542), Expect = 4.770e-60 Identity = 108/258 (41.86%), Postives = 159/258 (61.63%), Query Frame = 2 Query: 137 GVSSVEKTFTVRMNTYRRNDLLKRSAEHLASCDCVGRIQVVWSDQENPPPGM--DLFTENTRK-KVEFEVHDTNSLNHRFNATSPVSTEGVFSTDDDLEISCADLKFGFEAWQSSKMAMVGYSPRLV-TRDP--TTGRHSYRSWRVVRWNGVYNVILTKCCFMHRRHLITYTEEMTGAMLSYIDKHRNCEDIAMSVVVAKFHKTPPVWISGRVKEIGGDGISGLAHHFDARSDCVDFFAEQFGDMPLLESSKKVYPRR 892 G ++ + F+V +NT+RR+ LL+RS H A+C V + VVWS+ PP + + TR+ V FE+++ +SLN+RF + T+ VFS DDDL + C+ L+F F+ WQS+ AMVG+ PR+ DP +T + Y SW V W G Y+++L+K F HR++L YT M ++ Y+D++RNCEDIAMS +VA PP+W+ GR+ EIG GIS L H RS C++ FA +G MPL+ ++ K R Sbjct: 86 GPAASPRGFSVVINTWRRHALLRRSVAHYAACAGVEAVHVVWSEPRPPPETLRRGVLVNGTRRGTVRFEINEADSLNNRFRPIRSLGTDAVFSVDDDLIVPCSTLRFAFDVWQSAPSAMVGFVPRMHWLADPRGSTKEYRYGSWWSVWWTGTYSMVLSKASFFHRQYLDLYTNNMLPSIRKYVDENRNCEDIAMSFLVANHSGAPPIWVQGRIFEIGSTGISSLKGHSLQRSRCLNTFAAMYGHMPLVATTVKAVDSR 343
BLAST of mRNA_L-elsbetiae_contig1054.530.1 vs. uniprot
Match: A0A7I8K0X2_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K0X2_SPIIN) HSP 1 Score: 212 bits (540), Expect = 6.090e-60 Identity = 117/306 (38.24%), Postives = 167/306 (54.58%), Query Frame = 2 Query: 38 VLLVAVFLGPAIFLWIWHRLFAIDVSSALAESRGVSSVEKTFTVRMNTYRRNDLLKRSAEHLASCDCVGRIQVVWSDQENPPPGMDLFT-------ENTRK----KVEFEVHDTNSLNHRFNATSPVSTEGVFSTDDDLEISCADLKFGFEAWQSSKMAMVGYSPRLVTRDPTTGR---HSYRSWRVVRWNGVYNVILTKCCFMHRRHLITYTEEMTGAMLSYIDKHRNCEDIAMSVVVAKFHKTPPVWISGRVKEIGGDGISGLAHHFDARSDCVDFFAEQFGDMPLLESSKKVYPRRTGLLSWL 913 V V + +G A IW F +D G + +T+ +NT++RNDLLK+S EH ASC V I ++WS+ + PP L N+R ++EF+++ +SLN+RF + T+ V S DDD+ CA + F F WQS+ AMVG+ PR+ T+ + Y W V W G Y+++LTK F HR++L YT M A+ Y+ K+RNCEDIAMS +VA +PPVW+ G ++E+G GIS L H + RS CV FA +G MPL+ ++ K R SWL Sbjct: 41 VFAVVLIMGLAFSAAIWPHHFPVD---------GQPQARRGYTILINTFKRNDLLKQSVEHFASCSRVDSIHIIWSEAD--PPSDFLLACLRRVAHRNSRDGRIVEIEFDLNAEDSLNNRFKDIPELKTDAVLSVDDDVLFPCASVDFAFGVWQSAPAAMVGFVPRMHWLYRTSDGEEYYKYGGWWTVWWTGTYSMVLTKAAFFHRKYLGLYTNHMPAAIRDYVTKNRNCEDIAMSFLVANETASPPVWVKGAIREVGSSGISSLGSHNERRSQCVKDFAALYGRMPLVATTVKAIDGRR---SWL 332 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1054.530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1054.530.1 >prot_L-elsbetiae_contig1054.530.1 ID=prot_L-elsbetiae_contig1054.530.1|Name=mRNA_L-elsbetiae_contig1054.530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=297bp MQKRVLLVAVFLGPAIFLWIWHRLFAIDVSSALAESRGVSSVEKTFTVRMback to top mRNA from alignment at L-elsbetiae_contig1054:22563..26295+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1054.530.1 ID=mRNA_L-elsbetiae_contig1054.530.1|Name=mRNA_L-elsbetiae_contig1054.530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3733bp|location=Sequence derived from alignment at L-elsbetiae_contig1054:22563..26295+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1054:22563..26295+ >mRNA_L-elsbetiae_contig1054.530.1 ID=mRNA_L-elsbetiae_contig1054.530.1|Name=mRNA_L-elsbetiae_contig1054.530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1782bp|location=Sequence derived from alignment at L-elsbetiae_contig1054:22563..26295+ (Laminarionema elsbetiae ELsaHSoW15)back to top |