mRNA_L-elsbetiae_contig10536.525.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10536.525.1 vs. uniprot
Match: A0A6H5K4Q0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4Q0_9PHAE) HSP 1 Score: 419 bits (1078), Expect = 4.640e-145 Identity = 201/231 (87.01%), Postives = 218/231 (94.37%), Query Frame = 1 Query: 1 NRGYCTVLACILNGEKRAVKIPLATCSDPDGAVADLSNEIRILKRLRHPHLCSVYGAGGWRTEGELPFLVLERLQYKNLAQQCGTDVDDTSMRAQLRQKRLRGKFPFRRRLGFALQLVDLLNYLHSESIPGGFVVHRRDLKPSNIGVTEDGVLKVFDFGLARVREVRDPLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKADMYSYGVVLWELCTLQKPFAGMSSHEHARKV 693 N GYCTVLAC+L+GEKRAVKIPLATCSDP+GAVADL+NEIRILKRLRHPHLCSVYGAGGWR EGELPFLVLERLQYKNLAQQCGTDVDDTSM + +QK+LR KF FR+RLG+ LQL DLL YLHSESIPGGFV+HR DLKPSNIG+++DGVLKVFDFGLA++RE RDPLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKAD+YSYG+VLWELC LQKPFAGMSSHEHARKV Sbjct: 89 NGGYCTVLACMLHGEKRAVKIPLATCSDPEGAVADLTNEIRILKRLRHPHLCSVYGAGGWRAEGELPFLVLERLQYKNLAQQCGTDVDDTSMIVEFKQKKLRAKFRFRKRLGYGLQLGDLLRYLHSESIPGGFVIHR-DLKPSNIGISDDGVLKVFDFGLAKLREQRDPLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKADIYSYGIVLWELCALQKPFAGMSSHEHARKV 318
BLAST of mRNA_L-elsbetiae_contig10536.525.1 vs. uniprot
Match: A0A6H5JMU8_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMU8_9PHAE) HSP 1 Score: 186 bits (471), Expect = 4.680e-54 Identity = 115/241 (47.72%), Postives = 152/241 (63.07%), Query Frame = 1 Query: 7 GYCTVLACILNGEKRAV-KIPLATCSDPDGAVADLSNEIRILKRLR----HPHLCSVYGAGGWRTEGELPFLVLERLQYKNLA------QQCGTDVDDTSMRAQLRQKRLRGKFPFRRRLGFALQLVDLLNYLHSESIPGGFVVHRRDLKPSNIGVTEDGVLKVFDFGLARVREVR-DPLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKADMYSYGVVLWELCTLQKPFAGMSSHEHARKV 693 G+C V +C NG +RAV KIP P+ A ADL EI I KR+ HP++ + GAG + + GE PFLVLERL+ +LA + G D D L RL AL+L D L YLH +++PG F++HR DLKP+NIG+ +G +KVFDFGL+ V+EVR L +Y M+G GS+RFM+PEV G+PYNEK D+YS+ +VLWE+CTL+KPFAGMS +H R+V Sbjct: 66 GFCIVCSCTYNGVQRAVLKIPKP--QGPNSAAADLLAEIAIYKRISARGGHPNIAAALGAG-FTSRGE-PFLVLERLEGGSLAGAIESSRTLGGDAADGGAWVDLVT-----------RLPVALELADALQYLHRDALPG-FILHR-DLKPTNIGLCAEGHVKVFDFGLSVVQEVRRGNLNQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWEICTLRKPFAGMSVADHYREV 289
BLAST of mRNA_L-elsbetiae_contig10536.525.1 vs. uniprot
Match: A0A6H5L2N4_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2N4_9PHAE) HSP 1 Score: 172 bits (437), Expect = 2.100e-49 Identity = 100/238 (42.02%), Postives = 142/238 (59.66%), Query Frame = 1 Query: 7 GYCTVLACILNGEKRAVKIP--LATCSDPDGAVADLSNEIRILKRLR----HPHLCSVYGAGGWRTEGEL---PFLVLERLQYKNLAQQCGTDVDDTSMRAQLRQKRLRGKFPFRRRLGFALQLVDLLNYLHSESIPGGFVVHRRDLKPSNIGVTEDGVLKVFDFGLARVREVRDPLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKADMYSYGVVLWELCTLQKPFAGMSSHEHARKV 693 G+C + +CI G++ +KIP T S GA DL EI I +++ HP++ +GAG +GE PFL+LERLQ G +++ R+ G+ P A++L + + +LH +IPGG V+HR DLKPSNIG+ G +KVFD GL+ VR+V + T Y M+G GS+RFMAPEV G+ YNEK D+YS+ +VLW++C L+KPFAGMS +H +V Sbjct: 26 GFCVICSCIYRGQQAVLKIPKPATTSSRSGGAAQDLLREISIYRQISLRGGHPNIARAFGAGTHVQQGETSPSPFLLLERLQ--------GGTLENAFERSTAVWSDPIGRLPV------AIELAEAVAFLHEAAIPGGVVLHR-DLKPSNIGLCGAGHIKVFDLGLSVVRQVLEAPTRVYEMSGMAGSKRFMAPEVCTGLSYNEKVDVYSFALVLWQICALRKPFAGMSEADHYLQV 248
BLAST of mRNA_L-elsbetiae_contig10536.525.1 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE) HSP 1 Score: 170 bits (430), Expect = 5.340e-47 Identity = 103/256 (40.23%), Postives = 145/256 (56.64%), Query Frame = 1 Query: 1 NRGYCTVLACILNGEKRAVKIPLATCSDPDGAVADLSNEIRILKRLRHPHLCSVYGAG-----------GWRTEGELP-----------FLVLERLQYKNLAQQCGT--DVDDTSMRAQLRQKRLRGKFPFRRRLGFALQLVDLLNYLHSESIPGGFVVHRRDLKPSNIGVTEDGVLKVFDFGLAR-VREVRDPLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKADMYSYGVVLWELCTLQKPFAGMSSHEHARKV 693 N G C++ G + VK+P C+ P+ A DL EI IL+RL+HP++ + GAG G GE F++LE L L + T D M + +R+ + +FP ++ + ALQL L+YLH +I G FVVHR DLKP NI + DG LK+FDFGLA+ VR L+ RY MTG+TGS R+M PEV +PYNEKAD+YS+G++LWE+ +L++PF G++ E + V Sbjct: 53 NGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQANAESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHR-DLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEGLNRKEFVQSV 307
BLAST of mRNA_L-elsbetiae_contig10536.525.1 vs. uniprot
Match: D7FS28_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS28_ECTSI) HSP 1 Score: 161 bits (408), Expect = 6.400e-44 Identity = 96/231 (41.56%), Postives = 138/231 (59.74%), Query Frame = 1 Query: 13 CTVLACILNGEKRAVKIPLATCSDPDGAVADLSNEIRILKRLRHPHLCSVYGAGGWRTEGELPFLVLERLQYKNLAQQCGTDVDDTSMRAQL--RQKRLRGKFPFRR--RLGFALQLVDLLNYLHSESIPGGFVVHRRDLKPSNIGVTEDGVLKVFDFGLARVREVRDPLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKADMYSYGVVLWELCTLQKPFAGMSSHEHARKV 693 C + + L+G K AVKIP C +P A DL E+ +LKR+ H H+ + GAG R + FLVLE L+ LA + D ++ + + RQKR + F L +++L L +LH +P F+VHR DLKP N+G DG LK+FDFGLARV + R+ + RY MTG+TGS R+MAPEV + +PYNEK D+Y++G++LWE+ ++ F GM + +V Sbjct: 7 CEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGN-REQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYH-MPDMFIVHR-DLKPDNVGFKADGTLKLFDFGLARVVKRRNRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERV 234
BLAST of mRNA_L-elsbetiae_contig10536.525.1 vs. uniprot
Match: A0A6V2JN82_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2JN82_9STRA) HSP 1 Score: 165 bits (418), Expect = 8.930e-44 Identity = 96/222 (43.24%), Postives = 132/222 (59.46%), Query Frame = 1 Query: 31 ILNGEKRAVKIPLATCSDPDGAVADLSNEIRILKRLRHPHLCSVYGAGGWRTEGELPFLVLERLQYKNLAQQCGTDVDDTSMRAQLRQKRLRGKFPFRRRLGFALQLVDLLNYLHSESIPGGFVVHRRDLKPSNIGVTEDGVLKVFDFGLARVREVRDP-LTDRYVMTGQTGSQRFMAPEVFDGMPYNEKADMYSYGVVLWELCTLQKPFAGMSSHEHARKV 693 +LNG VK C D A+ ++ E+ I +L H ++CS+ GAG T + F+VLERL L Q G D R + +K+ +F F + FA + D LNY HS++IPG +HR DLKP NIG T DG +K+ DFGLAR+ + D D Y M+GQTGS R+MAPEV +PYN+KAD+YS+G++LWEL +KP+ GM+ E +V Sbjct: 386 VLNGRPVVVKTLKPECQDVAVAINEIELELDIHSKLDHANICSLVGAG--TTSKGVRFIVLERLDGGTLTQMLGYDNRIRDRRRRFWRKK---QFAFVEVMRFARCIADALNYCHSQAIPGNMCLHR-DLKPDNIGFTLDGKVKLLDFGLARIVKNSDSDSNDVYHMSGQTGSLRYMAPEVAKSLPYNQKADVYSFGIILWELNAYKKPYEGMNKDEFYMRV 601
BLAST of mRNA_L-elsbetiae_contig10536.525.1 vs. uniprot
Match: A0A7S2S189_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S189_9STRA) HSP 1 Score: 163 bits (412), Expect = 6.880e-43 Identity = 97/230 (42.17%), Postives = 132/230 (57.39%), Query Frame = 1 Query: 7 GYCTVLACILNGEKRAVKIPLATCSDPDGAVADLSNEIRILKRLRHPHLCSVYGAGGWRTEGELPFLVLERLQYKNLAQQCGTDVDDTSMRAQLRQKRLRGKFPFRRRLGFALQLVDLLNYLHSESIPGGFVVHRRDLKPSNIGVTEDGVLKVFDFGLARVREVRDPLTDR-YVMTGQTGSQRFMAPEVFDGMPYNEKADMYSYGVVLWELCTLQKPFAGMSSHEHARKV 693 G + +LN VK C D A+ ++ E+ I +L+H H+ S+ GAG T F+VLERL +L Q G D R + +K+ F + L A + + + YLHS++IPG V+HR DLKP NIG T DG +K+ DFGLARV E P TD Y M+G+TGS R+MAPEV DG PYN KAD+YS+G++LWE+ +KPF GM + +V Sbjct: 389 GNSWIHTAVLNRHPVVVKWLKPECQDLAVAINEIEAELDIHAQLQHSHIVSLCGAG--LTSKGSRFMVLERLDGGSLTQVLGYDTRIRDRRRRFWKKK---HFTYVEVLKCARSIAEAMEYLHSDAIPGCMVLHR-DLKPDNIGFTLDGTIKLIDFGLARVVENSSPDTDELYEMSGETGSLRYMAPEVADGQPYNHKADVYSFGIILWEMLAHKKPFDGMDKEQFFERV 612
BLAST of mRNA_L-elsbetiae_contig10536.525.1 vs. uniprot
Match: A0A1E7FU65_9STRA (Kinase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FU65_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.440e-42 Identity = 94/221 (42.53%), Postives = 132/221 (59.73%), Query Frame = 1 Query: 7 GYCTVLACILNGEKRAVKIPLATCSDPDGAVADLSNEIRILKRLRHPHLCSVYGAGGWRTEGELPFLVLERLQYKNLAQQCGTDVDDTSMRAQLRQKRLRGKFPFRRRLGFALQLVDLLNYLHSESIPGGFVVHRRDLKPSNIGVTEDGVLKVFDFGLARVREVRDPLT-DRYVMTGQTGSQRFMAPEVFDGMPYNEKADMYSYGVVLWELCTLQKPFAGM 666 G + I +G+ VK C D A+ ++ E+ I RL HP++ SV GAG W T ++ F+VLERL L Q G D R + +K+ P+ L A L L Y H ++IPG V+HR DLKP NIG T DG +K+ DFGL+R+ E DP T ++Y M+G+TGS R+MAPEV +G+PYN KAD+YS+G++LWE+ ++PF G+ Sbjct: 507 GNSWIHTAIFDGKPVVVKTLRPECQDTALAINEIEAEVAIHARLNHPNVVSVIGAG-W-TSKKVRFIVLERLDGGTLTQMLGYDTRIRDRRRRFWRKK---SLPYLDVLRCARSLACALQYCHEQAIPGSMVLHR-DLKPDNIGFTLDGKVKLIDFGLSRMLENADPTTNEKYEMSGETGSLRYMAPEVAEGLPYNHKADVYSFGIILWEMNAGKRPFNGL 721
BLAST of mRNA_L-elsbetiae_contig10536.525.1 vs. uniprot
Match: A0A6H5L2R6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R6_9PHAE) HSP 1 Score: 161 bits (408), Expect = 1.840e-42 Identity = 96/231 (41.56%), Postives = 138/231 (59.74%), Query Frame = 1 Query: 13 CTVLACILNGEKRAVKIPLATCSDPDGAVADLSNEIRILKRLRHPHLCSVYGAGGWRTEGELPFLVLERLQYKNLAQQCGTDVDDTSMRAQL--RQKRLRGKFPFRR--RLGFALQLVDLLNYLHSESIPGGFVVHRRDLKPSNIGVTEDGVLKVFDFGLARVREVRDPLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKADMYSYGVVLWELCTLQKPFAGMSSHEHARKV 693 C + + L+G K AVKIP C +P A DL E+ +LKR+ H H+ + GAG R + FLVLE L+ LA + D ++ + + RQKR + F L +++L L +LH +P F+VHR DLKP N+G DG LK+FDFGLARV + R+ + RY MTG+TGS R+MAPEV + +PYNEK D+Y++G++LWE+ ++ F GM + +V Sbjct: 220 CEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGN-REQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYH-MPDMFIVHR-DLKPDNVGFKADGTLKLFDFGLARVVKRRNRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERV 447
BLAST of mRNA_L-elsbetiae_contig10536.525.1 vs. uniprot
Match: A0A7S2E226_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E226_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.640e-41 Identity = 92/222 (41.44%), Postives = 130/222 (58.56%), Query Frame = 1 Query: 31 ILNGEKRAVKIPLATCSDPDGAVADLSNEIRILKRLRHPHLCSVYGAGGWRTEGELPFLVLERLQYKNLAQQCGTDVDDTSMRAQLRQKRLRGKFPFRRRLGFALQLVDLLNYLHSESIPGGFVVHRRDLKPSNIGVTEDGVLKVFDFGLARVREVRDPLTDR-YVMTGQTGSQRFMAPEVFDGMPYNEKADMYSYGVVLWELCTLQKPFAGMSSHEHARKV 693 +LNG VK C D A+ ++ E+ I +L HP +C + GAG T + F+VLERL L+Q G D R + +K+ +F + L FA + D L+Y H +IPG +HR DLKP NIG DG +K+ DFGLAR+ + D ++ Y M+GQTGS R+MAPEV +PYN+KAD+YS+G++LWEL +KP+ GM+ E +V Sbjct: 413 VLNGRAVVVKTLKPECQDVALAINEIELELDIHSKLDHPFICGLVGAG--TTSKGVRFIVLERLDGGTLSQMLGYDNRIRDRRRRFWRKK---QFAYVEVLKFARCIADALDYCHRLAIPGAMCLHR-DLKPDNIGFAIDGTVKILDFGLARIVKYSDLNSNEVYQMSGQTGSLRYMAPEVAKCLPYNQKADVYSFGIILWELNAYKKPYDGMNKEEFYERV 628 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10536.525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10536.525.1 >prot_L-elsbetiae_contig10536.525.1 ID=prot_L-elsbetiae_contig10536.525.1|Name=mRNA_L-elsbetiae_contig10536.525.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp NRGYCTVLACILNGEKRAVKIPLATCSDPDGAVADLSNEIRILKRLRHPHback to top mRNA from alignment at L-elsbetiae_contig10536:2869..6581+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10536.525.1 ID=mRNA_L-elsbetiae_contig10536.525.1|Name=mRNA_L-elsbetiae_contig10536.525.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3713bp|location=Sequence derived from alignment at L-elsbetiae_contig10536:2869..6581+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10536:2869..6581+ >mRNA_L-elsbetiae_contig10536.525.1 ID=mRNA_L-elsbetiae_contig10536.525.1|Name=mRNA_L-elsbetiae_contig10536.525.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1386bp|location=Sequence derived from alignment at L-elsbetiae_contig10536:2869..6581+ (Laminarionema elsbetiae ELsaHSoW15)back to top |