mRNA_L-elsbetiae_contig1052.509.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1052.509.1 vs. uniprot
Match: A0A6H5K275_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K275_9PHAE) HSP 1 Score: 224 bits (572), Expect = 2.180e-70 Identity = 132/208 (63.46%), Postives = 143/208 (68.75%), Query Frame = 2 Query: 173 MKSAVAVIGALCCGASSAGAFVVSPGRPGGSSVASSAVRRSHVRRISSPSMSS----------VATPTTASVAPTQEPERRSKIQAIGSNDDYVNAMAQHEDKLVVIKFYDQFCRACDEIRPRFEDLSTSLPEEDAIFFELEFSENKDLCKQLGIRRLPTVQIYDGQAGRVADLPAGPSRFTDVEERFAEVASIKTSG--NAPEGVME 760 MKSA A+IGALCCGASSAGAF++ GRP GS A PT A QEPERR +QAI SNDDYV+AMAQHEDKLVVIKFYDQFCRACDEIRPR+EDLS S PEEDA+FF++EFS KDLCKQLGI RLPTVQIYDG GRVADLPAGPSRFTDVEE+ A V S K S +A E V E Sbjct: 1 MKSAFAMIGALCCGASSAGAFILPVGRPSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARPTAA-----QEPERRPNVQAIDSNDDYVSAMAQHEDKLVVIKFYDQFCRACDEIRPRYEDLSRSQPEEDAVFFDVEFSGAKDLCKQLGIMRLPTVQIYDGTNGRVADLPAGPSRFTDVEEKIAAVISSKKSSRQDAVEAVAE 203
BLAST of mRNA_L-elsbetiae_contig1052.509.1 vs. uniprot
Match: A0A835YVS6_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS6_9STRA) HSP 1 Score: 114 bits (286), Expect = 3.460e-28 Identity = 54/121 (44.63%), Postives = 77/121 (63.64%), Query Frame = 2 Query: 389 KIQAIGSNDDYVNAMAQHEDKLVVIKFYDQFCRACDEIRPRFEDLSTSLPEEDAIFFELEFSENKDLCKQLGIRRLPTVQIYDGQAGRVADLPAGPSRFTDVEERFAEVASIKTSGNAPEG 751 K++ I ++ AMA + DK VV+KFYD FCRAC + P+FE ++ P F+++EF ++K LCK LGI LPT+QIY G AG++AD+P GP RF E AEV + ++G+ G Sbjct: 20 KVKTITGEMQFLEAMAANGDKPVVLKFYDTFCRACKAVAPKFERMAQENP--GVAFYQVEFRQDKPLCKSLGITMLPTIQIYQGSAGKIADMPVGPKRFHVAEATLAEVLNQNSNGHGATG 138
BLAST of mRNA_L-elsbetiae_contig1052.509.1 vs. uniprot
Match: A0A835YYQ5_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ5_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.330e-27 Identity = 61/126 (48.41%), Postives = 77/126 (61.11%), Query Frame = 2 Query: 368 QEPERRSKIQAI-GSNDDYVNAMAQHEDKLVVIKFYDQFCRACDEIRPRFEDLSTSLPEEDAIFFELEFSENKDLCKQLGIRRLPTVQIYDGQAGRVADLPAGPSRFTDVEERFAEVASIKTSGNA 742 QE K++ I D ++ AMA + D+ VVIKFYD FCRAC I P+FE ++ P F+E+EF ENK LCK LGI LPT+QIY G AG+VA +P GP RF EE A V + GN+ Sbjct: 59 QEQSENRKVKLIENGTDGFLEAMASNADRPVVIKFYDTFCRACKAIAPKFERMAQENP--GVSFYEVEFRENKPLCKSLGITMLPTIQIYRGAAGKVASMPVGPKRFHLAEEALASV--LAQEGNS 180
BLAST of mRNA_L-elsbetiae_contig1052.509.1 vs. uniprot
Match: A0A7S4A7N2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7N2_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 4.780e-21 Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = 2 Query: 377 ERRSKIQAIGSNDDYVNAMAQHE-DKLVVIKFYDQFCRACDEIRPRFEDLSTSLPEEDAIFFELEFSENKDLCKQLGIRRLPTVQIYDGQAGRVADLPAGPSRFTDVEERFAEV 715 ++ S + AI D ++ AM++ DK+V IKFY +CRAC I PRFE L+ EE A F+E+EFS NKDLC++L I++LP VQ + G G VA + GPS+F DV + ++ Sbjct: 107 KQSSHVPAIVDEDTFLAAMSKSAGDKVVAIKFYAGWCRACKTIAPRFERLAKEFGEE-AAFYEIEFSANKDLCRRLDIKKLPCVQFFRGAEGHVATVMCGPSKFPDVRLKLEDL 219
BLAST of mRNA_L-elsbetiae_contig1052.509.1 vs. uniprot
Match: A0A7S1TN71_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TN71_9RHOD) HSP 1 Score: 91.3 bits (225), Expect = 1.170e-18 Identity = 46/125 (36.80%), Postives = 73/125 (58.40%), Query Frame = 2 Query: 347 TASVAPTQEPERRSKIQAIGSNDDYVNAMAQHEDKLVVIKFYDQFCRACDEIRPRFEDLSTSLPEEDAIFFELEFSENKDLCKQLGIRRLPTVQIYDGQAGRVADLPAGPSRFTDVEERFAEVAS 721 TA V + R + + DY+ A+ ++LVVIKFY +CR+C + P+ + L+ PE +F E++F EN +LC+++G++ +P YDG AGRV D AGP+R + E+ AE A+ Sbjct: 67 TAPVPILERVTRMEPVVRLSGFGDYLAALECSSERLVVIKFYAPWCRSCKAMEPKVKRLAREYPE--ILFCEVDFQENHELCRRIGVKSIPAFHFYDGSAGRVEDFTAGPARAKMLIEKVAEYAA 189
BLAST of mRNA_L-elsbetiae_contig1052.509.1 vs. uniprot
Match: F0YB20_AURAN (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB20_AURAN) HSP 1 Score: 83.2 bits (204), Expect = 1.090e-16 Identity = 37/80 (46.25%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 443 EDKLVVIKFYDQFCRACDEIRPRFEDLSTSLPEEDAIFFELEFSENKDLCKQLGIRRLPTVQIYDGQAGRVADLPAGPSR 682 +D+LV +KFY +CRAC I PRFE L+ ++ FFE+EF+ NK+LC++L I++LP VQ + G G V + GPS+ Sbjct: 19 DDRLVAVKFYASWCRACKSIAPRFERLAKEFAGDEVQFFEIEFAANKELCRRLNIKKLPCVQYFRGSLGCVDTVMCGPSK 98
BLAST of mRNA_L-elsbetiae_contig1052.509.1 vs. uniprot
Match: A0A7S0SEU0_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SEU0_9CHLO) HSP 1 Score: 80.1 bits (196), Expect = 1.150e-14 Identity = 37/102 (36.27%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 443 EDKLVVIKFYDQFCRACDEIRPRFEDLSTSLPEEDAIFFELEFSENKDLCKQLGIRRLPTVQIYDGQAGRVADLPAGPSRFTDVEERFAEVASIKTSGNAPE 748 ED LVV+ FY ++C AC + P+ ++ S + IF ++EF +NK++C+ +G++ LP +Y G+AGRVA+ A ++ + E AE SG+AP+ Sbjct: 79 EDTLVVVDFYARWCGACRALHPKLCKIAASDAHSNVIFLKVEFDDNKEMCRNMGVKILPYFHMYKGKAGRVAEFSASLTKVARIRENLAE---YNPSGDAPQ 177
BLAST of mRNA_L-elsbetiae_contig1052.509.1 vs. uniprot
Match: A0A7S2UII6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UII6_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.010e-13 Identity = 49/145 (33.79%), Postives = 69/145 (47.59%), Query Frame = 2 Query: 443 EDKLVVIKFYDQFCRACDEIRPRFEDLSTSLPEEDAI-------------FFELEFSENKDLCKQLGIRRLPTVQIYDGQAGRVADLPAGPSRFTDVEERFAEVASIKTSGNAPEGVME*KF*RDMMGCSTCGTHL-NRLGSHHF 835 +D+L V+KF+ +C++C + R++ L+ L E D I F E+EF+ N DLCK LG+ +LP + IY G GRVAD GP F V E+ + K S F + M S G H+ L HF Sbjct: 2 DDRLCVVKFHASWCKSCQKFGIRYKKLA--LQEGDKIDRRGAVLEKGRVRFAEVEFTANADLCKTLGVHKLPYIHIYSGSKGRVADFACGPKNFPLVIEKMNKFLDKKMS----------HFDKTMEAGSALGDHIATELQDQHF 134
BLAST of mRNA_L-elsbetiae_contig1052.509.1 vs. uniprot
Match: A0A7S3ATR9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ATR9_9EUKA) HSP 1 Score: 77.4 bits (189), Expect = 1.370e-13 Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 434 AQHEDKLVVIKFYDQFCRACDEIRPRFEDLSTSLPEEDAIFFELEFSENKDLCKQLGIRRLPTVQIYDGQAGRVADLPAGPSRFTDVEERFAE 712 A E+++VVIKF+ +CRAC + P+F ++ P D F E+ F NK LCK LGI+ LP ++I G G+V GPS+ + ++E+ + Sbjct: 71 ATRENRVVVIKFFASWCRACKAMSPKFTRIADDWP--DVEFHEIMFDNNKKLCKSLGIKILPYIEIIGGSGGKVEGFTCGPSKISRLQEKLEQ 161
BLAST of mRNA_L-elsbetiae_contig1052.509.1 vs. uniprot
Match: A0A7S3TUC7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TUC7_9SPIT) HSP 1 Score: 75.5 bits (184), Expect = 2.920e-13 Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 2 Query: 434 AQHEDKLVVIKFYDQFCRACDEIRPRFEDLSTSLPEEDAIFFELEFSENKDLCKQLGIRRLPTVQIYDGQAGRVADLPAGPSRFTDVEERF 706 A+ E+++VVIKFY +CRAC + P++ ++ PE + F E+ + NK LCK+LGI+ LP ++I G AG+V GPS+ + + ER Sbjct: 32 AKAENRVVVIKFYASWCRACKAMGPKYVKVAQDWPELE--FCEMLYDNNKKLCKELGIKVLPYIEIVAGNAGKVDGFSCGPSKISKLIERL 120 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1052.509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1052.509.1 >prot_L-elsbetiae_contig1052.509.1 ID=prot_L-elsbetiae_contig1052.509.1|Name=mRNA_L-elsbetiae_contig1052.509.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=197bp MKSAVAVIGALCCGASSAGAFVVSPGRPGGSSVASSAVRRSHVRRISSPSback to top mRNA from alignment at L-elsbetiae_contig1052:18107..21205- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1052.509.1 ID=mRNA_L-elsbetiae_contig1052.509.1|Name=mRNA_L-elsbetiae_contig1052.509.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3099bp|location=Sequence derived from alignment at L-elsbetiae_contig1052:18107..21205- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1052:18107..21205- >mRNA_L-elsbetiae_contig1052.509.1 ID=mRNA_L-elsbetiae_contig1052.509.1|Name=mRNA_L-elsbetiae_contig1052.509.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1182bp|location=Sequence derived from alignment at L-elsbetiae_contig1052:18107..21205- (Laminarionema elsbetiae ELsaHSoW15)back to top |