mRNA_L-elsbetiae_contig10505.497.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10505.497.1 vs. uniprot
Match: A0A6H5L046_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L046_9PHAE) HSP 1 Score: 231 bits (589), Expect = 2.190e-72 Identity = 115/123 (93.50%), Postives = 119/123 (96.75%), Query Frame = 2 Query: 32 MPPAPKSKKSSKKQTLKYVIDCFIPVEDRVLDPASFEKFLHDRIKVNGKAGQLGDLITITREKARITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIVNDQPEADEE 400 MPPAPKSKK SKKQT+K+VIDCFIPVEDRVLDP+SFEKFLHDRIKVNGKAGQLGD +TI REKARITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIVNDQ EADEE Sbjct: 1 MPPAPKSKKCSKKQTVKFVIDCFIPVEDRVLDPSSFEKFLHDRIKVNGKAGQLGDAVTIAREKARITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIVNDQQEADEE 123
BLAST of mRNA_L-elsbetiae_contig10505.497.1 vs. uniprot
Match: A0A8D1CLN3_PIG (Uncharacterized protein n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1CLN3_PIG) HSP 1 Score: 219 bits (559), Expect = 7.200e-68 Identity = 109/123 (88.62%), Postives = 117/123 (95.12%), Query Frame = 2 Query: 32 MPPAPKSKKSSKKQTLKYVIDCFIPVEDRVLDPASFEKFLHDRIKVNGKAGQLGDLITITREKARITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIVNDQPEADEE 400 MPPAPKSKKSSKKQT+K+VID +PV DRVLDPASFEKFLHDRIKVNGKAGQLGD++TITRE+A ITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSI+ND+ ADEE Sbjct: 1 MPPAPKSKKSSKKQTVKFVIDSHVPVADRVLDPASFEKFLHDRIKVNGKAGQLGDVVTITRERASITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIINDELAADEE 123
BLAST of mRNA_L-elsbetiae_contig10505.497.1 vs. uniprot
Match: M4BIK4_HYAAE (Uncharacterized protein n=7 Tax=Peronosporaceae TaxID=4777 RepID=M4BIK4_HYAAE) HSP 1 Score: 180 bits (456), Expect = 2.110e-52 Identity = 92/123 (74.80%), Postives = 102/123 (82.93%), Query Frame = 2 Query: 32 MPPAPKSKKSSKKQTLKYVIDCFIPVEDRVLDPASFEKFLHDRIKVNGKAGQLGDLITITREKARITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIVNDQPEADEE 400 M P K+KK SKKQ LK+ IDC IPV+D VLDPASFEKFLHDRIKV GK G LGD ITITREK ++ V A PFSKRYLKYLTKKYLKKQQLRDYLHVIAS+KNTYELRYF+I + +A+EE Sbjct: 1 MAPPHKTKKISKKQQLKFTIDCTIPVDDHVLDPASFEKFLHDRIKVGGKTGVLGDSITITREKTKLQVAAVPPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKNTYELRYFNIHDAGNDAEEE 123
BLAST of mRNA_L-elsbetiae_contig10505.497.1 vs. uniprot
Match: H3GXW9_PHYRM (Uncharacterized protein n=17 Tax=Peronosporaceae TaxID=4777 RepID=H3GXW9_PHYRM) HSP 1 Score: 178 bits (452), Expect = 8.350e-52 Identity = 91/123 (73.98%), Postives = 101/123 (82.11%), Query Frame = 2 Query: 32 MPPAPKSKKSSKKQTLKYVIDCFIPVEDRVLDPASFEKFLHDRIKVNGKAGQLGDLITITREKARITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIVNDQPEADEE 400 M PA K KK SKKQ LK+ IDC IPV+D VLDPASFEKFLHDRIKV GK G LG+ I ITREK ++ V A PFSKRYLKYLTKKYLKKQQLRDYLHVIAS+KNTYELRYF+I + +ADE+ Sbjct: 1 MAPAHKGKKVSKKQLLKFTIDCTIPVDDHVLDPASFEKFLHDRIKVGGKTGVLGEAIKITREKTKLQVVAVPPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKNTYELRYFNIHDAGNDADED 123
BLAST of mRNA_L-elsbetiae_contig10505.497.1 vs. uniprot
Match: A0A024UQN7_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024UQN7_9STRA) HSP 1 Score: 174 bits (442), Expect = 2.510e-50 Identity = 90/124 (72.58%), Postives = 104/124 (83.87%), Query Frame = 2 Query: 32 MPPAPKSKKSSKKQTLKYVIDCFIPVEDRVLDPASFEKFLHDRIKVNGKAGQLGDLITITREKARITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIVNDQPE-ADEE 400 M PA K ++ KK LK+ ID IPV+D+VLD ASFEKFLHDRIKVNGK G LGD+ITITREK ++ + AQAPFSKRYLKYLTKKYLKKQQLRDYLHVIAS+K+TYELRYF+I N + + ADEE Sbjct: 1 MAPANKKTQAGKKTVLKFTIDATIPVDDQVLDVASFEKFLHDRIKVNGKTGVLGDVITITREKTKLHIAAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKSTYELRYFNIHNAKDDDADEE 124
BLAST of mRNA_L-elsbetiae_contig10505.497.1 vs. uniprot
Match: A0A0N7L406_PLAHL (60s ribosomal protein l22 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L406_PLAHL) HSP 1 Score: 174 bits (441), Expect = 3.770e-50 Identity = 85/118 (72.03%), Postives = 99/118 (83.90%), Query Frame = 2 Query: 47 KSKKSSKKQTLKYVIDCFIPVEDRVLDPASFEKFLHDRIKVNGKAGQLGDLITITREKARITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIVNDQPEADEE 400 K KK SKKQ LK+ IDC IPV+D VLDPASFEKFLHDRIK+NGK G LG+ + ITREK ++ + A PFSKRYLKYLTKKYLKKQQLRDYLHVIAS+K+TYELRYF+I + +ADE+ Sbjct: 7 KGKKISKKQLLKFTIDCTIPVDDHVLDPASFEKFLHDRIKINGKTGVLGESVKITREKTKLQIVAMPPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKSTYELRYFNIHDAGNDADED 124
BLAST of mRNA_L-elsbetiae_contig10505.497.1 vs. uniprot
Match: A0A835Z6N6_9STRA (Ribosomal protein L22e n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6N6_9STRA) HSP 1 Score: 174 bits (440), Expect = 5.140e-50 Identity = 87/124 (70.16%), Postives = 100/124 (80.65%), Query Frame = 2 Query: 32 MPPAPKSKKSSKKQTLKYVIDCFIPVEDRVLDPASFEKFLHDRIKVNGKAGQLGDLITITREKARITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIVND-QPEADEE 400 MP APK KK+SK +T K+ IDC +PV D VLDPA+FEKF+HDRIKVNGKAG LGD +TITRE R+ V AQ PFSKRYLKYLTKKYLKKQ LRDYL V+A+ K+TYE+RYFSI D +A EE Sbjct: 1 MPAAPKGKKASKVKTAKFTIDCHVPVGDSVLDPANFEKFMHDRIKVNGKAGDLGDAVTITREADRLVVVAQLPFSKRYLKYLTKKYLKKQSLRDYLRVVATKKDTYEMRYFSIAADGDADAAEE 124
BLAST of mRNA_L-elsbetiae_contig10505.497.1 vs. uniprot
Match: K3WA34_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WA34_GLOUD) HSP 1 Score: 173 bits (439), Expect = 7.720e-50 Identity = 87/120 (72.50%), Postives = 100/120 (83.33%), Query Frame = 2 Query: 41 APKSKKSSKKQTLKYVIDCFIPVEDRVLDPASFEKFLHDRIKVNGKAGQLGDLITITREKARITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIVNDQPEADEE 400 A K KK KKQ LK+ IDC IPV+DRVLDPASFEKFLHDRIKV GK G LGD + I+REK ++ V A APFSKRYLKYLTKKYLKKQQLRDYLHVIAS+K+TYELRYF+I + +AD++ Sbjct: 6 ANKGKKVGKKQVLKFTIDCTIPVDDRVLDPASFEKFLHDRIKVGGKVGVLGDAVKISREKNKLHVAAVAPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKHTYELRYFNIHDGGNDADDD 125
BLAST of mRNA_L-elsbetiae_contig10505.497.1 vs. uniprot
Match: A0A662WKT4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKT4_9STRA) HSP 1 Score: 173 bits (439), Expect = 8.500e-50 Identity = 87/120 (72.50%), Postives = 99/120 (82.50%), Query Frame = 2 Query: 41 APKSKKSSKKQTLKYVIDCFIPVEDRVLDPASFEKFLHDRIKVNGKAGQLGDLITITREKARITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIVNDQPEADEE 400 A K KK KKQ LK+ IDC IPV+D VLDPASFEKFLHDRIKV GKAG LGD + ITREK ++ V A PFSKRYLKYLTKKYLKKQQLRDYLHVIAS+K+TYELRYF+I + +AD++ Sbjct: 9 ANKGKKVGKKQLLKFTIDCTIPVDDHVLDPASFEKFLHDRIKVGGKAGVLGDAVKITREKTKLQVVAVPPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKHTYELRYFNIHDGGNDADDD 128
BLAST of mRNA_L-elsbetiae_contig10505.497.1 vs. uniprot
Match: A0A067CEX9_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CEX9_SAPPC) HSP 1 Score: 172 bits (437), Expect = 1.440e-49 Identity = 90/125 (72.00%), Postives = 105/125 (84.00%), Query Frame = 2 Query: 32 MPPAPKSK-KSSKKQTLKYVIDCFIPVEDRVLDPASFEKFLHDRIKVNGKAGQLGDLITITREKARITVTAQAPFSKRYLKYLTKKYLKKQQLRDYLHVIASNKNTYELRYFSIVNDQPE-ADEE 400 M PA K+ K+ KK LK+ IDC PVED+VLD ASFEKFLHDRIKVNGK G LGD++TI+REK ++ + A APFSKRYLKYLTKKYLKKQQLRDYLHVIAS+K+TYELRYF+I N++ E ADEE Sbjct: 1 MAPATKTAPKTGKKNLLKFTIDCSTPVEDQVLDVASFEKFLHDRIKVNGKTGVLGDVVTISREKTKLHIAAVAPFSKRYLKYLTKKYLKKQQLRDYLHVIASDKSTYELRYFNIHNNKDEDADEE 125 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10505.497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10505.497.1 >prot_L-elsbetiae_contig10505.497.1 ID=prot_L-elsbetiae_contig10505.497.1|Name=mRNA_L-elsbetiae_contig10505.497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=124bp MPPAPKSKKSSKKQTLKYVIDCFIPVEDRVLDPASFEKFLHDRIKVNGKAback to top mRNA from alignment at L-elsbetiae_contig10505:2674..5636- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10505.497.1 ID=mRNA_L-elsbetiae_contig10505.497.1|Name=mRNA_L-elsbetiae_contig10505.497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2963bp|location=Sequence derived from alignment at L-elsbetiae_contig10505:2674..5636- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10505:2674..5636- >mRNA_L-elsbetiae_contig10505.497.1 ID=mRNA_L-elsbetiae_contig10505.497.1|Name=mRNA_L-elsbetiae_contig10505.497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=744bp|location=Sequence derived from alignment at L-elsbetiae_contig10505:2674..5636- (Laminarionema elsbetiae ELsaHSoW15)back to top |