mRNA_L-elsbetiae_contig10497.484.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10497.484.1
Unique NamemRNA_L-elsbetiae_contig10497.484.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10497.484.1 vs. uniprot
Match: D7G5K5_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K5_ECTSI)

HSP 1 Score: 613 bits (1581), Expect = 1.120e-197
Identity = 307/341 (90.03%), Postives = 310/341 (90.91%), Query Frame = 1 
Query:    1 RFLTHVHAVSMAPPWVGALLTAMRVPTKNAVQVKKVIEATQEAIEVNKVLSTPKAVLEAMARSISPDIYKSFTARYTKDIALEALVDHLIDNPSDVVGLELGPGDEPLLPGTLLPMRGVRATDNPPPTFSGASCRALVRYLATAPESMAFRRPVDTTVFTDYHKFVEDPCDLRTIDRRLEACEYGQSVVRFANDVRLVWRNGKRYNKEGSEVWIAADKLAKAFDVLLEKWVMGPWRAKRPKDDSKGKRKTEEEDGVPEELLAALNFAALEGSTPPWAAGGKNWDPENGGLTEHHIQALLARVPWSEGCALCGRDDSPDKTLICDRCDREIHMFCLEPKLKK 1023
            RFL HVHA+S+APPWV ALLTAMRVPTKNAVQVKKVI   QEAIEVNK LSTPK VLEAMARSISPDIYKSFTARYTKDIALEALVDHLIDNPSDVVGLELGPGDEPLLPGTLLPM                 CRALVRYLATAPESMAFRRPVDTTVFTDYHKFVEDPCDLRTIDRRLEA EYGQSVVRFANDVRLVWRNGKRYNKEGSEVW AADKLAKAFDVLLEKWVMGPWRAKRPK+DSKGKRK EEEDGVPEELLAALNFA LEGS PPWAAGGKNWDPENGGLTE HIQ LLARVPWSEGCALCGRDDSPDKTLICDRCDREIHMFCLEPKLKK
Sbjct:  629 RFLAHVHAISIAPPWVAALLTAMRVPTKNAVQVKKVI---QEAIEVNKGLSTPKPVLEAMARSISPDIYKSFTARYTKDIALEALVDHLIDNPSDVVGLELGPGDEPLLPGTLLPM-----------------CRALVRYLATAPESMAFRRPVDTTVFTDYHKFVEDPCDLRTIDRRLEASEYGQSVVRFANDVRLVWRNGKRYNKEGSEVWSAADKLAKAFDVLLEKWVMGPWRAKRPKEDSKGKRKAEEEDGVPEELLAALNFADLEGSVPPWAAGGKNWDPENGGLTERHIQTLLARVPWSEGCALCGRDDSPDKTLICDRCDREIHMFCLEPKLKK 949
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BLAST of mRNA_L-elsbetiae_contig10497.484.1 vs. uniprot
Match: A0A6H5J8B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8B2_9PHAE)

HSP 1 Score: 393 bits (1010), Expect = 8.020e-121
Identity = 184/194 (94.85%), Postives = 187/194 (96.39%), Query Frame = 1 
Query:  442 MAFRRPVDTTVFTDYHKFVEDPCDLRTIDRRLEACEYGQSVVRFANDVRLVWRNGKRYNKEGSEVWIAADKLAKAFDVLLEKWVMGPWRAKRPKDDSKGKRKTEEEDGVPEELLAALNFAALEGSTPPWAAGGKNWDPENGGLTEHHIQALLARVPWSEGCALCGRDDSPDKTLICDRCDREIHMFCLEPKLKK 1023
            MAFRRPVDTTVFTDYHKFVEDPCDLRTIDRRLEA EYGQSVVRFANDVRLVWRNGKRYNKEGSEVW AADKLAKAFDVLLEKWVMGPWRAKRPK+DSK KRK EEEDGVPEELLA+LNFA LEGS PPWAAGGKNW+PENGGLTE HIQALLARVPWSEGCALCGRDDSPDKTLICDRCDREIHMFCLEPKLKK
Sbjct:    1 MAFRRPVDTTVFTDYHKFVEDPCDLRTIDRRLEASEYGQSVVRFANDVRLVWRNGKRYNKEGSEVWNAADKLAKAFDVLLEKWVMGPWRAKRPKEDSKAKRKAEEEDGVPEELLASLNFADLEGSVPPWAAGGKNWEPENGGLTERHIQALLARVPWSEGCALCGRDDSPDKTLICDRCDREIHMFCLEPKLKK 194
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BLAST of mRNA_L-elsbetiae_contig10497.484.1 vs. uniprot
Match: A0A485LX01_9STRA (Aste57867_25174 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LX01_9STRA)

HSP 1 Score: 104 bits (260), Expect = 6.850e-21
Identity = 67/211 (31.75%), Postives = 102/211 (48.34%), Query Frame = 1 
Query:  400 CRALVRYLATAPESMAFRRPVDTTVFTDYHKFVEDPCDLRTIDRRLEACEYGQS---VVRFANDVRLVWRNGKRYNKEGSEVWIAADKLAKAFDVLLEKWVMGP--WRAKRPKDDSKGKRKTEEEDGVPEELLAALNFAALEGSTPPWAAGGKNWDPENGGLTEHHIQALLARVPWSEGCALCGRDDSPDKTLICDRCDREIHMFCLEPKL 1017
            C  ++R L + P +  F  PV+ +   DY   + +P DL TI  R++   Y      V  FA DVRLV+ N + +N+ GS++ +AAD LAK F+ +  +W++ P  W+      D      TE+ D     +LA  +                        L + H+  L +  PW  GC+ C  +D  D+ L+CDRCD E+HM CL+P L
Sbjct:  218 CSGILRRLMSEPSADPFLHPVNPSDVPDYLDVIYNPIDLGTILARVKKDNYYTGPIGVALFAADVRLVFDNCREFNETGSDIVVAADLLAKDFEKMFYEWIVCPSAWKLLPSTGDL-----TEDAD-----ILAQFHTE----------------------LDDSHV--LASWCPWDAGCSTCKSNDDLDQMLLCDRCDNELHMQCLDPPL 394
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BLAST of mRNA_L-elsbetiae_contig10497.484.1 vs. uniprot
Match: A0A484DR61_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DR61_BRELC)

HSP 1 Score: 103 bits (258), Expect = 1.250e-20
Identity = 68/195 (34.87%), Postives = 95/195 (48.72%), Query Frame = 1 
Query:  448 FRRPVDTTVFTDYHKFVEDPCDLRTIDRRL--EACEYGQSVVR-FANDVRLVWRNGKRYNKEGSEVWIAADKLAKAFDVLLEKWVMGP--WRAKRPKDDSKGKRKTEEEDGVPEELLAALNFAALEGSTPPWAAGGKNWDPENGGLTEHHIQALLARVPWSEGCALCGRDDSPDKTLICDRCDREIHMFCLEPKL 1017
            F++PVDT    DY  F+ +P DL TI  RL  E+   G S V  FA+DVRLV+RN K YN EGS +W  AD+L + F+     W++ P  W       +++  ++ E+E    EE+    NF  +      WA                         PW  GC +C   D  D+ L+CDRCD E+HM C  P++
Sbjct:  258 FQQPVDTEEVPDYLNFITNPMDLGTILTRLGRESYYIGPSAVSLFASDVRLVFRNCKTYNAEGSAIWRVADELLRTFEKYFYNWILSPIAWLKLPFVGEAEKDQRLEKE--FREEVE---NFYDV------WA-------------------------PWQTGCCVCNIPDHSDELLLCDRCDGEVHMHCATPRI 416
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BLAST of mRNA_L-elsbetiae_contig10497.484.1 vs. uniprot
Match: A0A3R6YTC0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YTC0_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.570e-20
Identity = 65/216 (30.09%), Postives = 100/216 (46.30%), Query Frame = 1 
Query:  400 CRALVRYLATAPESMAFRRPVDTTVFTDYHKFVEDPCDLRTIDRRLEACEYGQ---SVVRFANDVRLVWRNGKRYNKEGSEVWIAADKLAKAFDVLLEKWVMGP--WRAKRPKDDSKGKRKTEEEDGVPEELLAALNFAALEGSTPPWAAGGKNWDPENGGLTEHHIQ-----ALLARVPWSEGCALCGRDDSPDKTLICDRCDREIHMFCLEPKL 1017
            CR ++  L   P +  F +PV+ +   +Y   + +P D  TI  RL+   Y     +V  FA+DVRLV+ N + +N EGSE+   AD+LAK F+ +  +W++ P  W+                       LL +   AA +                   LT+ H +     AL +  PW  GC+ C  +D  +  L+CDRCD E+H+ CL+P L
Sbjct:  214 CRGIIVRLMADPSAEPFLQPVNVSEVPEYLDVIYNPIDFGTILARLKKEVYYSGPIAVALFASDVRLVFANCREFNAEGSEIVAIADQLAKDFEKMFYEWIICPSAWK-----------------------LLPSTGDAAEDAEI----------------LTQFHHELDESHALASWSPWDSGCSTCHSNDDLENMLLCDRCDNELHVHCLDPPL 390
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BLAST of mRNA_L-elsbetiae_contig10497.484.1 vs. uniprot
Match: A0A3R6VP11_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6VP11_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.930e-20
Identity = 66/211 (31.28%), Postives = 99/211 (46.92%), Query Frame = 1 
Query:  400 CRALVRYLATAPESMAFRRPVDTTVFTDYHKFVEDPCDLRTIDRRLEACEYGQ---SVVRFANDVRLVWRNGKRYNKEGSEVWIAADKLAKAFDVLLEKWVMGP--WRAKRPKDDSKGKRKTEEEDGVPEELLAALNFAALEGSTPPWAAGGKNWDPENGGLTEHHIQALLARVPWSEGCALCGRDDSPDKTLICDRCDREIHMFCLEPKL 1017
            CR ++R L   P +  F  PV+ +    Y   + +P D  TI  RL+   Y     +V  FA+D+RLV+ N K +N EGS++ + AD LAK F+ +  +WV+ P  W+      D+      E+ D     +LA  +   +E S   W                          PW  GC+ C R+D  +  L+CDRCD E+H+ CL+P L
Sbjct:  220 CRGILRRLMAEPSAEPFLHPVNLSDAPGYLDVIYNPIDFGTILGRLKKEAYYSGPIAVALFASDMRLVFANCKEFNAEGSDIVVTADHLAKDFEKMFYEWVICPSAWKLLPSTGDA-----AEDAD-----ILAQFH-TEMEASVATWQ-------------------------PWEAGCSTCQRNDQLEHMLLCDRCDNELHVHCLDPPL 394
[Close]
BLAST of mRNA_L-elsbetiae_contig10497.484.1 vs. uniprot
Match: W4GEM0_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GEM0_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.270e-20
Identity = 66/211 (31.28%), Postives = 100/211 (47.39%), Query Frame = 1 
Query:  400 CRALVRYLATAPESMAFRRPVDTTVFTDYHKFVEDPCDLRTIDRRLEACEYGQ---SVVRFANDVRLVWRNGKRYNKEGSEVWIAADKLAKAFDVLLEKWVMGP--WRAKRPKDDSKGKRKTEEEDGVPEELLAALNFAALEGSTPPWAAGGKNWDPENGGLTEHHIQALLARVPWSEGCALCGRDDSPDKTLICDRCDREIHMFCLEPKL 1017
            CR ++R L   P +  F  PV+ +    Y   + +P D  TI  RL+   Y     +V  FA+D+RLV+ N K +N EGS++ + AD LAK F+ +  +WV+ P  W+      D+      E+ D     +LA  + + +E S   W                          PW  GC+ C R+D  +  L+CDRCD E+H+ CL+P L
Sbjct:  220 CRGILRRLMAEPSAEPFLHPVNLSDAPGYLDVIYNPIDFGTILGRLKKEVYYSGPIAVALFASDMRLVFANCKEFNAEGSDIVVTADHLAKDFEKMFYEWVICPSAWKLLPSTGDA-----AEDAD-----ILAQFH-SEMEASVATWQ-------------------------PWEAGCSTCQRNDQLEHMLLCDRCDNELHVHCLDPPL 394
[Close]
BLAST of mRNA_L-elsbetiae_contig10497.484.1 vs. uniprot
Match: A0A662XHZ1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XHZ1_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.100e-18
Identity = 65/201 (32.34%), Postives = 90/201 (44.78%), Query Frame = 1 
Query:  448 FRRPVDTTVFTDYHKFVEDPCDLRTIDRRLEACEY---GQSVVRFANDVRLVWRNGKRYNKEGSEVWIAADKLAKAFDVLLEKWVMGP--WRAKRPKDDSKGKRKTEEE---DGVPEELLAALNFAALEGSTPPWAAGGKNWDPENGGLTEHHIQALLARVPWSEGCALCGRDDSPDKTLICDRCDREIHMFCLEPKLKKV 1026
            F  PVD     DY   + +P DL TI  R     Y      V  FA++VRLV+RN K YN EGS++W  AD+L   F+  L +W+M P  W       DS+  +K + E   +G              E S   WA                         PW  GC++CG + + ++ L+CDRCD EIHM C  P + ++
Sbjct:  252 FLHPVDVEEVPDYLNIITNPIDLGTITTRASRESYYVGPAGVSLFASEVRLVFRNCKTYNAEGSDIWRVADELLHCFEKWLYEWLMCPSAWLKMSTIGDSEDDQKLQSEFRDEG--------------ENSYDLWA-------------------------PWHVGCSICGSNGNNEELLLCDRCDGEIHMHCSTPDITEL 413
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BLAST of mRNA_L-elsbetiae_contig10497.484.1 vs. uniprot
Match: A0A1V9YNZ2_9STRA (Chromodomain-helicase-DNA-binding protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNZ2_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.940e-18
Identity = 64/211 (30.33%), Postives = 97/211 (45.97%), Query Frame = 1 
Query:  400 CRALVRYLATAPESMAFRRPVDTTVFTDYHKFVEDPCDLRTIDRRL--EACEYGQSVVR-FANDVRLVWRNGKRYNKEGSEVWIAADKLAKAFDVLLEKWVMGP--WRAKRPKDDSKGKRKTEEEDGVPEELLAALNFAALEGSTPPWAAGGKNWDPENGGLTEHHIQALLARVPWSEGCALCGRDDSPDKTLICDRCDREIHMFCLEPKL 1017
            C  ++R L   P +  F  PVD     DY   +++P DL TI  RL  E    G +    F +D+RLV+ N   +N EGSE+   A +L + F+ L  +W++ P  W+      DS      EE+  + ++    LN +                            +AL +  PW  GC++C  ++  +  LICDRCD EIH+ CL+P L
Sbjct:  219 CGGILRRLMADPSAEVFLHPVDPKEVPDYLDHIDNPMDLGTIQTRLARETHYVGPAAYALFVSDLRLVFTNCIFFNAEGSEISTVAKELLREFEKLFYEWIICPSAWQLLPSTGDS------EEDAEILQQFHGELNDS----------------------------RALNSWTPWEPGCSVCKSNEDVEAILICDRCDNEIHLECLDPPL 395
[Close]
BLAST of mRNA_L-elsbetiae_contig10497.484.1 vs. uniprot
Match: A0A1V9ZWX9_9STRA (Chromodomain-helicase-DNA-binding protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWX9_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.810e-17
Identity = 61/212 (28.77%), Postives = 96/212 (45.28%), Query Frame = 1 
Query:  400 CRALVRYLATAPESMAFRRPVDTTVFTDYHKFVEDPCDLRTIDRRLEACEYGQSVVRFA---NDVRLVWRNGKRYNKEGSEVWIAADKLAKAFDVLLEKWVMGP--WRAKRPKDDSKGKRKTEEEDGVPEELLAALNFAALEGSTPPWAAGGKNWDPENGGLTEHHIQALLARVPWSEGCALCGRDDSPDKTLICDRCDREIHMFCLEPKLK 1020
            C  ++R L     +  F++PVDT    +Y   +++P DL TI  R     Y    V +A   +D+RLV+ N   +N +GSE+   A  L K F+ L  +WV+ P  W+      D       EE+  + ++    LN +                            +AL +  PW   C++C  ++  D  L+CDRCD EIH+ CL+P L+
Sbjct:  218 CGGILRRLMADNGADVFKQPVDTDAIPEYLDVIDNPMDLGTIQNRFARENYYVGPVAYALFVSDIRLVFTNCITFNADGSEISNFAHDLLKEFEKLFYEWVICPSAWQLLPSTGD------LEEDAEILKQFHGELNDS----------------------------RALNSWTPWEPSCSVCKSNEDSDALLMCDRCDNEIHLECLDPPLE 395
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10497.484.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5K5_ECTSI1.120e-19790.03Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5J8B2_9PHAE8.020e-12194.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A485LX01_9STRA6.850e-2131.75Aste57867_25174 protein n=1 Tax=Aphanomyces stella... [more]
A0A484DR61_BRELC1.250e-2034.87Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A3R6YTC0_9STRA1.570e-2030.09Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A3R6VP11_9STRA1.930e-2031.28Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W4GEM0_9STRA2.270e-2031.28Uncharacterized protein n=8 Tax=Aphanomyces astaci... [more]
A0A662XHZ1_9STRA1.100e-1832.34Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A1V9YNZ2_9STRA1.940e-1830.33Chromodomain-helicase-DNA-binding protein n=1 Tax=... [more]
A0A1V9ZWX9_9STRA2.810e-1728.77Chromodomain-helicase-DNA-binding protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10497contigL-elsbetiae_contig10497:954..6694 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score106.7
Seed ortholog evalue2.1e-20
Seed eggNOG ortholog653948.CCA22651
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K11424,ko:K11654,ko:K14437
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko05202,map00310,map05202
Hectar predicted targeting categoryother localisation
EggNOG free text desc.SET domain
EggNOG OGsCOG0553@1,COG2940@1,COG5076@1,KOG0384@2759,KOG1081@2759,KOG1474@2759
EC2.1.1.43,3.6.4.12
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03021,ko03036
Exons7
Model size1027
Cds size996
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10497.484.1prot_L-elsbetiae_contig10497.484.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10497 954..6664 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815272.9456763-CDS-L-elsbetiae_contig10497:953..10911622815272.9456763-CDS-L-elsbetiae_contig10497:953..1091Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10497 954..1091 -
1691682809.6072888-CDS-L-elsbetiae_contig10497:953..10911691682809.6072888-CDS-L-elsbetiae_contig10497:953..1091Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10497 954..1091 -
1622815272.988421-CDS-L-elsbetiae_contig10497:2461..26331622815272.988421-CDS-L-elsbetiae_contig10497:2461..2633Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10497 2462..2633 -
1691682809.6193347-CDS-L-elsbetiae_contig10497:2461..26331691682809.6193347-CDS-L-elsbetiae_contig10497:2461..2633Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10497 2462..2633 -
1622815273.0024395-CDS-L-elsbetiae_contig10497:3210..33781622815273.0024395-CDS-L-elsbetiae_contig10497:3210..3378Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10497 3211..3378 -
1691682809.6277134-CDS-L-elsbetiae_contig10497:3210..33781691682809.6277134-CDS-L-elsbetiae_contig10497:3210..3378Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10497 3211..3378 -
1622815273.0140474-CDS-L-elsbetiae_contig10497:3846..39961622815273.0140474-CDS-L-elsbetiae_contig10497:3846..3996Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10497 3847..3996 -
1691682809.6420183-CDS-L-elsbetiae_contig10497:3846..39961691682809.6420183-CDS-L-elsbetiae_contig10497:3846..3996Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10497 3847..3996 -
1622815273.030294-CDS-L-elsbetiae_contig10497:4743..48921622815273.030294-CDS-L-elsbetiae_contig10497:4743..4892Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10497 4744..4892 -
1691682809.6537309-CDS-L-elsbetiae_contig10497:4743..48921691682809.6537309-CDS-L-elsbetiae_contig10497:4743..4892Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10497 4744..4892 -
1622815273.0441425-CDS-L-elsbetiae_contig10497:5638..57691622815273.0441425-CDS-L-elsbetiae_contig10497:5638..5769Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10497 5639..5769 -
1691682809.6638646-CDS-L-elsbetiae_contig10497:5638..57691691682809.6638646-CDS-L-elsbetiae_contig10497:5638..5769Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10497 5639..5769 -
1622815273.056678-CDS-L-elsbetiae_contig10497:6576..66641622815273.056678-CDS-L-elsbetiae_contig10497:6576..6664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10497 6577..6664 -
1691682809.6735597-CDS-L-elsbetiae_contig10497:6576..66641691682809.6735597-CDS-L-elsbetiae_contig10497:6576..6664Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10497 6577..6664 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815273.0702493-UTR-L-elsbetiae_contig10497:6664..66941622815273.0702493-UTR-L-elsbetiae_contig10497:6664..6694Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10497 6665..6694 -
1691682809.6830814-UTR-L-elsbetiae_contig10497:6664..66941691682809.6830814-UTR-L-elsbetiae_contig10497:6664..6694Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10497 6665..6694 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10497.484.1

>prot_L-elsbetiae_contig10497.484.1 ID=prot_L-elsbetiae_contig10497.484.1|Name=mRNA_L-elsbetiae_contig10497.484.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=332bp
MAPPWVGALLTAMRVPTKNAVQVKKVIEATQEAIEVNKVLSTPKAVLEAM
ARSISPDIYKSFTARYTKDIALEALVDHLIDNPSDVVGLELGPGDEPLLP
GTLLPMRGVRATDNPPPTFSGASCRALVRYLATAPESMAFRRPVDTTVFT
DYHKFVEDPCDLRTIDRRLEACEYGQSVVRFANDVRLVWRNGKRYNKEGS
EVWIAADKLAKAFDVLLEKWVMGPWRAKRPKDDSKGKRKTEEEDGVPEEL
LAALNFAALEGSTPPWAAGGKNWDPENGGLTEHHIQALLARVPWSEGCAL
CGRDDSPDKTLICDRCDREIHMFCLEPKLKKV
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mRNA from alignment at L-elsbetiae_contig10497:954..6694-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10497.484.1 ID=mRNA_L-elsbetiae_contig10497.484.1|Name=mRNA_L-elsbetiae_contig10497.484.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5741bp|location=Sequence derived from alignment at L-elsbetiae_contig10497:954..6694- (Laminarionema elsbetiae ELsaHSoW15)
AGGTTTTTGACCCACGTGCACGCCGTCTCCATGGCGCCCCCGTGGGTGGG
TGCCCTGCTGACGGCGATGCGGGTGCCGACCAAGAACGCGGTGCAGGTCA
AGAAGGTCATCGAGGCGAGTGGGCTTTGCTTGGCTTTGCTCGGCGAAGGG
TGTGCCTGCCCCCTTGCCACCAACGGGGGTTTCGTGGTCAAAGCGACGAG
TGCATACATACATATACATACAGCAGTAAATTGCGTGGGCGCGAAAAGGT
AAAGGTTGTGCACCAGGTCAGGTGTCCAACTTGGTATTTTGTATTTTGGA
CTTTGAAAAAGTTCAGCTGAAAAATTTGCGCGCGAGTCGTTGCCCTGTTC
TGTTCCCTTGGAGCCTTCCCCAAAATCTAATTATAATAAAAAAAAAATCT
ACAATAAAAGGTTTAACTTTTTATTTGAGAGACTCCGATTGGACGGGAAG
GACACGCGTGACACCTCGTTGTTGCTCGACCCACGTGGCCCCTTATGGTT
CCTTATCTGAGCCTGTTTGGCGGTCGCGGCCTCTCCGATGTGGCGGTGCC
GCCGCCCCCACCACCGCGGGCTTGAACCGATGTTTAACAACGATTTCGCC
ATGTGCTGGATTGATTGGTCTGCCACCACGAAGGATCCTGATGCGTTTCG
CTTTTCGGGGCAGAGATAAGGGATCGGTATCGGTGCATGCACGGCCGCGC
CTCATCAACTGGGTTTGGCATTCATCGAGTTGACACCTTTCTTGGCTTTG
GCACGCCTTGGCATTCGTTGACGTGACACCTCTCTTGATTTTGACACCTC
TTGGCATTCATTGACTTGACACCTCTTGGCATTCATTGACCTGATACCCT
TTCTTGACTTTGACACCTTTTGGCATTCGTTGACCTGACACCTTTCTGGG
CTGCCTGCCTGCCGGCATCCGCAAGCACAGGAGGCCATCGAGGTGAACAA
AGTATTGTCGACCCCGAAGGCCGTGCTGGAAGCCATGGCCAGATCCATCA
GCCCGGACATCTACAAGAGCTTCACGGCACGGTACACCAAAGACATTGCC
CTCGAGGTACGTTGTTGGTTGGTTGCTGCTGTTGGTATAGCATTTTTGAT
TCATGTTTACGTACACGCGAATGTCACAGCAGTCTTACGTACGTCCAAGT
CTGCGAAAAATGGAAAGAGGCGTGTTCCAGAGGGACTGTTTTTTTATTAT
TTTTTGTCATGTCCCGGGGTCTGTTGTGTGAGCGGAGATCTCCGGCCGCG
CCCCGAACGCGAAAGTACCTCCGTCCGTCCTTCTCGTCGACGACGGAGAC
AAGACGAGATAAGATAGGCACTTTTTTTTCTAGTGATGTTGCACATACTG
TACATAATGTACATATAACGGGGGGTTTAAAGCGTCTGCGTGTTGATCCA
GCCGCCTGTATCTATCTGTTCATCAGGAACAGGAGCGGCGGCGCTCTACC
GTATGTGCGTATTCATCTCGACACAAGTGTTTTGGAGTATTTATAAAATA
TGCATTTATGTTGCCCATACATAGAATACCAACAACAAATTACGAAAGCA
TAACATACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCGGCCCTGGGGGCCCCCCCCCTGACCAACCCCCC
CCCCCGTGTTGGNNNNNNNNNNTATTTATAAAATATGCATTTTGTTTTCC
CCAAAAAAAAACCCCAACAACAAATTACGAAAACAAAACACCCCCCCCCC
CCCCCCCCGACACGCCCTCCCCCGGCCGGCCTCCCTCCCCGCCTCCATCC
AGGCTCTGGTGGACCACCTCATAGACAATCCATCCGACGTTGTTGGGCTC
GAGCTCGGCCCTGGCGACGAACCCCTGCTGCCGGGCACCCTCCTGCCAAT
GCGAGGCGTCCGGGCCACCGACAACCCGCCGCCCACCTTCTCGGGGGCCT
CGTCGACGCCGACCGGAGGAGGGGGGGGGGGTATGGTCGATGGCGGGGGC
ATGGGAAGCGGGCCGGACGGGGAGGCTTACAGCGGCTTCTTCCCCGCTGC
CGATGGCGGGGCGGGGGACGCCAGCGGCGGCGCCAAATCGGAGAGCATGC
GCAGGTCAGTGGCCGGTGTTTTGCGTGTCACGGGGTCTCGCTTCTCGTGT
TTTTGGGCGTCGTTGTTGAAAAGGGCTGGTTTAAGGGGAAACTGATGTTG
TAGGTTGTGAGTGGCCGTAGACTCCTTTGTCTTGTGCGATGTCTGTTTTA
TTGTTGGTATGTATCCCGTAAAATTTGTGTGCTCTTGTTGCTTTTGCTGT
AGTTTTTTTGTCGGGATCCCTGCCTCGCTTTGGGAGGTAAATAGTGTACC
CCGTGGTCACTATCCAGCCTTTCTCCGATTTGCCTGCCCTCGCATACATT
TTCAAGCCGGGTGTACTGCTGCTGTTCTTTGCTGTCTTGTCTGCTTTGCT
AGAATTTTCGTACGTTCGCACACAAGGCGTGACGTGAGATGCTGAGCGTA
TACCTACGAACGATCGTGTATTCCTTGTGCACCCCCTCAGAGTACGCCAC
ACACTTTTCATCGATCCTCTCGCAGCATCGTTGGACAACACACGAACGTG
CTTCGCAGGAGTATTTGTATGGTATGTATGTTGTATTTCATCGTTTTGAG
TAAATAGCTCTTGTTTTCGGTGGTATCCTACTGACGGCACTTTTCCAGAT
GCCGAGCGCTGGTACGGTACTTGGCCACGGCGCCGGAGAGCATGGCGTTC
CGAAGGCCTGTGGACACCACGGTGTTCACGGACTACCACAAGTTCGTGGA
AGACCCGTGCGACCTTCGCACGATCGACAGGCGTCTCGAGGCCTGCGAGT
AAGTGCTTGTTAATTCTGTCTCTCTGTTGGTTTTGTTTGTTTGCGGTCGT
CGTGTGTAAAGTTGTAGTTACTGCTGTTCTTTTTTGTTCGTGCGGGTGTG
CTGCCAGTCAGTCTTGGAAGCAGGCGTTTGGCCTTTAACTGCTGCTGCTG
CTGCTGCAGTTGCTTGCTGCAGGATCCACGTCTGCCGTGGAATACATTGG
AATACACTGGAATACATTACACTCTTTTGCCTGGCCATTGTAGCTGCTGC
TATTGCTGCTGGCTCGATGTACGCCTACCTTGGAATACATTTACACCCTG
TTGCCCTAGCCGTTGTAGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGC
TCAATGTACGCCTGCCTACCTTAGAATACATGTGCGCCCTGTTGTCTTGG
ACCATTGTGCAGTGTCAACGACCTCCCCGTCTCTGAATTGAAAACACGAC
GGTGCGCTCACAACAGGTACGGGCAGAGCGTGGTACGGTTCGCCAACGAC
GTTAGGCTGGTGTGGCGGAACGGCAAGCGCTACAACAAGGAGGGCTCCGA
GGTCTGGATCGCGGCGGACAAGCTTGCCAAGGCGTTTGACGTGCTTCTGG
AGAAGTGGGTCATGGGGCCGTGGCGAGCGAAGAGGTACATCATGGCAGGC
CCTTCTTGTGTGTGTTTGTCTATACCGTCCGCTTGTAGTCAGTAAACAAA
TACCTCACATGTTGAGCTCTAGTATTCAGTAAATTAAAACCTCACATGTT
GGGCTGTAGCACGGCTTTTGGGGGGGGAGGAGGGAAGTGGGTGGCGTCAT
ACATACGCATGAGAGGCCGAGAGCCCGTGCGTTCAGAGTTCAAGATCCAC
ACCCACGAAATCGAAGTTGTTGCCGACGAATCGAAATCACCGGATAACTA
TAAAGGAGTATGTAGCTTGGACAGAAAAACATAAAAAAAAGGGGGGGTTG
GTATGCCTCCAACAACAGCAGTCCCCGTGGAACGTCTTTTTCGCAGACTG
GGCGTATGTAGCCTGCTGACATTTGTCAACATGAATTTTAGATACATACT
TGGGGTACATCCAACCAAACCAGTATGAAGTTTTAAGTTGTAACACTAGA
GCCTCACCAGCCAGGCCAAACCAGCCTCAACCCGCGTTCACAGTTCACAC
CAAACTCACCGGTTGTTCACATCCAACCCAAACGCGAACACGAACACAAA
CACGGGGGCAGGCCCAAGGATGACAGCAAGGGGAAGCGGAAGACCGAGGA
GGAGGACGGCGTGCCGGAAGAGCTGCTGGCCGCCCTTAACTTCGCCGCCC
TGGAAGGCTCCACGCCTCCGTGGGCCGCGGGAGGGAAGAACTGGGACCCC
GAGAACGGGGGCCTCACGGAGCACCACATTCAGGTCCGTCTGTCCACCGG
CGTGCGACGAAAAACAGTATGTGTACCGTAGTTGACACAAGATACCGCAC
CCCCTGGACAGATTTTCAAAGGTCGATTCCTCCCCAGTATGAAAAGTGCC
AGTGCCGAAAGGGGTGGCGCTGGAATGATCTAGTCGAGGGCTGTGTTCGA
AAATGTGTTGTTTGGAGCTGGCACCTTCTTCGTTACGGAGTAATCGAGCT
CTAAAATTCGATCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTAATAG
CCTTAGTGGGTTTATGTACTGGAGGAAAGTCAGATGGGATACAGTAGGGA
AACGGCTAATAGGGGGGTCGGTTTGGGGTTAGCGTTAGAGGGTTATAGGG
TTACGGAACCCCTGTCTAATATTTCGTATATACTTCTATTTATTTAGACA
GGAAATCTTGGCGAAGGCGGCCCATTCGGGTCCGTCTGCCCCCCCGGCGT
GCGCCGAAAAGGCGGTTTAACCATGGGGGTACGGCAAGGCGAGGCTGGTC
GGCAGGCAGCCTGTCAGCTTCGGTAAAGATGGTTTTGATTCGTCGAATTG
TTTGTTGATTGTTGGCGGGTTTGTTGTTGTTGCGGTTTAATCTCTTCTCT
GCTCCTCTCCTTTTTGTCGTGAATATTACTATTTACGAAGGGAAATTTGA
TCGATGCTCGATCGATGCTCGATCGATGCTCGATCGATGCGCATTACATG
CACACATACACACGCACCGTTGTCTCGACGCAAGGCAAGCAAGCCCCCGA
GAAAAAGTGGTTGGTTTTTTCGGAACCATTTCAATCGTTGGAGCAGGTTG
AGGAAGGTTTCTCTAAATGTGTATGGTGCTCGGACAGATGACATAAAGCG
TAGCTTGGAGGCTTTTACTGAGATTCCGCTGCAGTTATATTTTTCATTCA
ATTTTGGAGGTAGACCTAGATAAATGCTAGATAAATGCCTGGACGAGGGG
CACGGATGAGGTCCTCCGCAGTGGACACGACGAAAAAAGCTCGCGGATGA
GACGACCAGCCGGAGTTTCGTCCTCGTGCGAGAATCAAGCGACGCGTCTC
CTGTTACACAAATACTGCCATAGAATTTAGTTCCGTATTTCCCCGTGTTT
CCCTCGCTTGTTCGTGTCACTGGCAGGCAGGCTAAACCCAAACACGACCC
CCCCCCCCCCCCCCTTTTTTTTATTTGCTTGAGCGAATGGTTTTTTTTCG
TCGTTGTGCATTAGTTNNNNNNNNNNTTCATCCCAGTTGTTCTGGTCACG
GGTCGACAGGCTAAACCCAAACACCCCCCCCCCCCCCCTTCCTTTTTTTT
TTATTGGCTTGATAAATTGGTTGTTTTGTTACGTTGACTAAAACTACCAT
CAGGCGCTGCTGGCAAGGGTGCCCTGGTCGGAGGGCTGCGCGCTGTGCGG
GCGCGACGACAGCCCCGACAAGACCTTGATCTGCGATCGCTGCGACCGAG
AGATCCACATGTTCTGCCTCGAGCCCAAGCTGAAGAAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10497:954..6694-

>mRNA_L-elsbetiae_contig10497.484.1 ID=mRNA_L-elsbetiae_contig10497.484.1|Name=mRNA_L-elsbetiae_contig10497.484.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1992bp|location=Sequence derived from alignment at L-elsbetiae_contig10497:954..6694- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGCCCCCGTGGGTGGGTGCCCTGCTGACGGCGATGCGGGTGCCGAC
CAAGAACGCGGTGCAGGTCAAGAAGGTCATCGAGGCGAATGGCGCCCCCG
TGGGTGGGTGCCCTGCTGACGGCGATGCGGGTGCCGACCAAGAACGCGGT
GCAGGTCAAGAAGGTCATCGAGGCGACACAGGAGGCCATCGAGGTGAACA
AAGTATTGTCGACCCCGAAGGCCGTGCTGGAAGCCATGGCCAGATCCATC
AGCCCGGACATCTACAAGAGCTTCACGGCACGGTACACCAAAGACATTGC
CCTCGAGCACAGGAGGCCATCGAGGTGAACAAAGTATTGTCGACCCCGAA
GGCCGTGCTGGAAGCCATGGCCAGATCCATCAGCCCGGACATCTACAAGA
GCTTCACGGCACGGTACACCAAAGACATTGCCCTCGAGGCTCTGGTGGAC
CACCTCATAGACAATCCATCCGACGTTGTTGGGCTCGAGCTCGGCCCTGG
CGACGAACCCCTGCTGCCGGGCACCCTCCTGCCAATGCGAGGCGTCCGGG
CCACCGACAACCCGCCGCCCACCTTCTCGGGGGCCTCGCTCTGGTGGACC
ACCTCATAGACAATCCATCCGACGTTGTTGGGCTCGAGCTCGGCCCTGGC
GACGAACCCCTGCTGCCGGGCACCCTCCTGCCAATGCGAGGCGTCCGGGC
CACCGACAACCCGCCGCCCACCTTCTCGGGGGCCTCATGCCGAGCGCTGG
TACGGTACTTGGCCACGGCGCCGGAGAGCATGGCGTTCCGAAGGCCTGTG
GACACCACGGTGTTCACGGACTACCACAAGTTCGTGGAAGACCCGTGCGA
CCTTCGCACGATCGACAGGCGTCTCGAGGCCTGCGAATGCCGAGCGCTGG
TACGGTACTTGGCCACGGCGCCGGAGAGCATGGCGTTCCGAAGGCCTGTG
GACACCACGGTGTTCACGGACTACCACAAGTTCGTGGAAGACCCGTGCGA
CCTTCGCACGATCGACAGGCGTCTCGAGGCCTGCGAGTACGGGCAGAGCG
TGGTACGGTTCGCCAACGACGTTAGGCTGGTGTGGCGGAACGGCAAGCGC
TACAACAAGGAGGGCTCCGAGGTCTGGATCGCGGCGGACAAGCTTGCCAA
GGCGTTTGACGTGCTTCTGGAGAAGTGGGTCATGGGGCCGTGGCGAGCGA
AGAGGTACGGGCAGAGCGTGGTACGGTTCGCCAACGACGTTAGGCTGGTG
TGGCGGAACGGCAAGCGCTACAACAAGGAGGGCTCCGAGGTCTGGATCGC
GGCGGACAAGCTTGCCAAGGCGTTTGACGTGCTTCTGGAGAAGTGGGTCA
TGGGGCCGTGGCGAGCGAAGAGGCCCAAGGATGACAGCAAGGGGAAGCGG
AAGACCGAGGAGGAGGACGGCGTGCCGGAAGAGCTGCTGGCCGCCCTTAA
CTTCGCCGCCCTGGAAGGCTCCACGCCTCCGTGGGCCGCGGGAGGGAAGA
ACTGGGACCCCGAGAACGGGGGCCTCACGGAGCACCACATTCAGGCCCAA
GGATGACAGCAAGGGGAAGCGGAAGACCGAGGAGGAGGACGGCGTGCCGG
AAGAGCTGCTGGCCGCCCTTAACTTCGCCGCCCTGGAAGGCTCCACGCCT
CCGTGGGCCGCGGGAGGGAAGAACTGGGACCCCGAGAACGGGGGCCTCAC
GGAGCACCACATTCAGGCGCTGCTGGCAAGGGTGCCCTGGTCGGAGGGCT
GCGCGCTGTGCGGGCGCGACGACAGCCCCGACAAGACCTTGATCTGCGAT
CGCTGCGACCGAGAGATCCACATGTTCTGCCTCGAGCCCAAGCTGAAGAA
GGTGGCGCTGCTGGCAAGGGTGCCCTGGTCGGAGGGCTGCGCGCTGTGCG
GGCGCGACGACAGCCCCGACAAGACCTTGATCTGCGATCGCTGCGACCGA
GAGATCCACATGTTCTGCCTCGAGCCCAAGCTGAAGAAGGTG
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