mRNA_L-elsbetiae_contig1049.482.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1049.482.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 146 bits (368), Expect = 8.290e-35 Identity = 75/140 (53.57%), Postives = 94/140 (67.14%), Query Frame = 1 Query: 1 RSRCLDAFIVALNQLCEGRGKHWYASTLQLQVTSLEFCRACRSVPALDVNVEDQTPRSLWAPSKTQTQSNTR---------VPAVRALCLTWALPMEVMVQNTTVGLWKWLKVLRLRGSVDSADLKS-VVWPPNMKQLFL 390 R+RCLDAF++AL+Q CEG K WYASTL+LQ+TSL+ CRACR+ L V+V+DQTPRSLW+ QT+ NTR VP VRAL LTWAL ME +++ + LW W + L L GS + L S VVWP + QL L Sbjct: 8 RTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVL 147
BLAST of mRNA_L-elsbetiae_contig1049.482.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 135 bits (340), Expect = 3.530e-32 Identity = 81/166 (48.80%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 1 RSRCLDAFIVALNQLCEGRGKHWYASTLQLQVTSLEFCRACRSVPALDVNVEDQTPRSLWAPSKTQTQS---------NTRVPAVRALCLTWALPMEVMVQNTTVGLWKWLKVLRLRGSVDSADLKSVVWPPNMKQLFLGGGTFGGGFNQSVGGVVWPASLQQLSF 471 RS CL AFIVALNQ C G+ K WYASTL+LQ+ SLEFC ACR VP L V V+ QTPRSLW+P K+ + + RVPAV+A LTWAL MEV++Q + V L K R+ G+ +A L S+ W Q+ L F S WPASL QL F Sbjct: 14 RSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFW----LQMMLKRLVFDSDMPASTAS--WPASLPQLLF 173
BLAST of mRNA_L-elsbetiae_contig1049.482.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 127 bits (319), Expect = 1.460e-31 Identity = 67/138 (48.55%), Postives = 81/138 (58.70%), Query Frame = 1 Query: 4 SRCLDAFIVALNQLCEGRGKHWYASTLQLQVTSLEFCRACRSVPALDVNVEDQTPRSLWAPSKTQTQSNT---------RVPAVRALCLTWALPMEVMVQNTTVGLWKWLKVLRLRGSVDSADLKSVVWPPNMKQLFL 390 +R DAF +AL+Q CEG K WY ST +LQ+ SL+ CRACRS P L V V TP SLW+P Q NT RVP VRAL LTWA ME +VQ + LW + L + G + +A L SVVWP + QL L Sbjct: 7 TRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVL 144
BLAST of mRNA_L-elsbetiae_contig1049.482.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 136 bits (342), Expect = 4.380e-31 Identity = 75/165 (45.45%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 4 SRCLDAFIVALNQLCEGRGKHWYASTLQLQVTSLEFCRACRSVPALDVNVEDQTPRSLWAPSKTQTQSN---------TRVPAVRALCLTWALPMEVMVQNTTVGLWKWLKVLRLRGSVDSADLKSVVWPPNMKQLFLGGGTFGGGFNQSVGGVVWPASLQQLSF 471 S+CLDAF+VALNQ C+G+ K WY STL+LQ+ SLE C ACR V L V V+ QTP SLW PS+ T +N +RVP V+A LTWALPM V+ Q + + R +A L+S VWP +K++ + +V WPASLQQLSF Sbjct: 7 SKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFES-------DMTVNTASWPASLQQLSF 164
BLAST of mRNA_L-elsbetiae_contig1049.482.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 108 bits (269), Expect = 1.660e-23 Identity = 58/133 (43.61%), Postives = 79/133 (59.40%), Query Frame = 1 Query: 13 LDAFIVALNQLCEGRGKHWYASTLQLQVTSLEFCRACRSVPALDVNVEDQTPRSLWAPSKTQTQ---------SNTRVPAVRALCLTWALPMEVMVQNTTVGLWKWLKVLRLRGSVDSADLKSVVWPPNMKQL 384 LD IVALNQ C+G+ K WY STL+LQ+ SLE C ACRS L V V + TP +LW+ ++T ++ RVPAV+ALC TWALPM+ + Q + G +A ++SVVWP ++K+L Sbjct: 90 LDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRL 222
BLAST of mRNA_L-elsbetiae_contig1049.482.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE) HSP 1 Score: 108 bits (270), Expect = 4.340e-23 Identity = 67/157 (42.68%), Postives = 87/157 (55.41%), Query Frame = 1 Query: 1 RSRCLDAFIVALNQLCEGRGKHWYASTLQLQVTSLEFCRACRSVPALDVNVEDQTPRSLWAPSKTQTQSNTRVPAVRALCLTWALPMEVMVQNTTVGLWKWLKVLRLRGSVDSADLKSVVWPPNMKQLFLGGGTFGGGFNQSVGGVVWPASLQQLSF 471 R C+DAFIVALN+ C+G + WYASTL+LQ SLEFC ACR VP T S + +R P VRA LTWAL M+V++Q+ + L + K R G +A+L S++W +K+L L + V WPASLQQLSF Sbjct: 16 RGECVDAFIVALNRTCDGGEQRWYASTLELQPVSLEFCVACRRVP---------TSHSTSTVGRL-VSGVSRAPVVRAYSLTWALSMDVLLQSCAMELQRGSKYRRSGGHSSAANLASMLWLQRLKRLVLE-------LDTPVITASWPASLQQLSF 155
BLAST of mRNA_L-elsbetiae_contig1049.482.1 vs. uniprot
Match: A0A6H5JL88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL88_9PHAE) HSP 1 Score: 108 bits (269), Expect = 2.530e-22 Identity = 64/149 (42.95%), Postives = 83/149 (55.70%), Query Frame = 1 Query: 67 WYASTLQLQVTSLEFCRACRSVPALDVNVEDQTPRSLWAPSKTQTQSNTR--------------VPAVRALCLTWALPMEVMVQNTTVGLWKWLKVLRLRGSVDSADLKSVVWPPNMKQLFLGGGTFGGGFNQSVGGVVWPASLQQLSF 471 W+ STL +Q+ SLEFCRA RS+P + ++V+ + PRSLW K+QT S+TR VP +RA L W L ME ++Q+T V LW LK L L G V A S+V P ++QL SV V WPA LQ+LSF Sbjct: 5 WFTSTLNIQLASLEFCRASRSIPTIALHVDSRIPRSLWDGRKSQTPSSTRGLEIRCWKARPLSRVPLIRASRLNWGLSMETLLQSTAVELWTGLKSLHLCGDVSDASPASMVQPQRLEQLEGNKDA-----RDSVEAVPWPAFLQKLSF 148
BLAST of mRNA_L-elsbetiae_contig1049.482.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 1.180e-21 Identity = 45/72 (62.50%), Postives = 56/72 (77.78%), Query Frame = 1 Query: 1 RSRCLDAFIVALNQLCEGRGKHWYASTLQLQVTSLEFCRACRSVPALDVNVEDQTPRSLWAPSKTQTQSNTR 216 RS+CLDAF+VALNQ C+G+ K WYASTL+LQ+ SLEFC ACR VP L V V+ +TPRSLW+P T ++ R Sbjct: 38 RSKCLDAFVVALNQTCDGQEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTTPITAHKR 109
BLAST of mRNA_L-elsbetiae_contig1049.482.1 vs. uniprot
Match: A0A6H5JA08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA08_9PHAE) HSP 1 Score: 104 bits (259), Expect = 8.830e-21 Identity = 69/163 (42.33%), Postives = 90/163 (55.21%), Query Frame = 1 Query: 4 SRCLDAFIVALNQLCEGRGKHWYASTLQLQVTSLEFCRACRSVPALDVNVEDQTPRSLWAPSKTQTQSN-------TRVPAVRALCLTWALPMEVMVQNTTVGLWKWLKVLRLRGSVDSADLKSVVWPPNMKQLFLGGGTFGGGFNQSVGGVVWPASLQQLSF 471 SRCLDA I+ALNQ G WY ST+QLQ+TSLE C ACRS+ L +NV+ TP LW + T ++ TRVP VRA +TW LP V ++N T W + L D + + WP ++L L G G GFN+SV + PAS++ L F Sbjct: 41 SRCLDALIIALNQ---ASGGEWYTSTMQLQLTSLELCAACRSMHLLKLNVQHGTPPRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLP-GVALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWP---EKLTLFG--VGPGFNRSVEHLSLPASVRFLVF 194
BLAST of mRNA_L-elsbetiae_contig1049.482.1 vs. uniprot
Match: A0A6H5JUA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA5_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 3.360e-19 Identity = 64/168 (38.10%), Postives = 93/168 (55.36%), Query Frame = 1 Query: 1 RSRCLDAFIVALNQLCEGRGKHWYASTLQLQVTSLEFCRACRSVPALDVNVEDQTPRSLWA-----PSKTQTQSNTRVPAVRALCLTWALPMEVMVQNTTVGLWKWLKVLRLRGSVDSADLKSVVWPPNMKQLFLGG----GTFGGG--FNQSVGGVVWPASLQQLSF 471 R CL+A IVALN+ +G K WY ST + Q+ SLEFC ACR+ LD+ V+ +TPR L A P + TRVP +RA +TW +P ++N+ + + +R DS L++V WP +K + + G F F+Q + GVVWP +L+QL+F Sbjct: 9 RDSCLNAIIVALNETSDG--KSWYTSTKERQLASLEFCIACRNHQTLDLKVDSRTPRRLLAAADAPPPHPKRLCGTRVPRLRARRVTWDIPTAAGLRNSIYSMMDADSLEFVRAFEDS--LEAVAWPRRLKTVEVSGIAEVAKFHDKSLFDQPIAGVVWPDTLEQLTF 172 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1049.482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1049.482.1 >prot_L-elsbetiae_contig1049.482.1 ID=prot_L-elsbetiae_contig1049.482.1|Name=mRNA_L-elsbetiae_contig1049.482.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=421bp RSRCLDAFIVALNQLCEGRGKHWYASTLQLQVTSLEFCRACRSVPALDVNback to top mRNA from alignment at L-elsbetiae_contig1049:17697..18959+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1049.482.1 ID=mRNA_L-elsbetiae_contig1049.482.1|Name=mRNA_L-elsbetiae_contig1049.482.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1263bp|location=Sequence derived from alignment at L-elsbetiae_contig1049:17697..18959+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1049:17697..18959+ >mRNA_L-elsbetiae_contig1049.482.1 ID=mRNA_L-elsbetiae_contig1049.482.1|Name=mRNA_L-elsbetiae_contig1049.482.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2526bp|location=Sequence derived from alignment at L-elsbetiae_contig1049:17697..18959+ (Laminarionema elsbetiae ELsaHSoW15)back to top |