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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 322 |
| Cds size | 195 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815272.6845317-UTR-L-elsbetiae_contig1049:1421..1474 | 1622815272.6845317-UTR-L-elsbetiae_contig1049:1421..1474 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1049 1422..1474 - |
| 1691682809.509904-UTR-L-elsbetiae_contig1049:1421..1474 | 1691682809.509904-UTR-L-elsbetiae_contig1049:1421..1474 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1049 1422..1474 - |
| 1622815272.730217-UTR-L-elsbetiae_contig1049:6735..6764 | 1622815272.730217-UTR-L-elsbetiae_contig1049:6735..6764 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1049 6736..6764 - |
| 1691682809.5207129-UTR-L-elsbetiae_contig1049:6735..6764 | 1691682809.5207129-UTR-L-elsbetiae_contig1049:6735..6764 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1049 6736..6764 - |
| 1622815272.7639894-UTR-L-elsbetiae_contig1049:9226..9271 | 1622815272.7639894-UTR-L-elsbetiae_contig1049:9226..9271 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1049 9227..9271 - |
| 1691682809.5492766-UTR-L-elsbetiae_contig1049:9226..9271 | 1691682809.5492766-UTR-L-elsbetiae_contig1049:9226..9271 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1049 9227..9271 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815272.740866-CDS-L-elsbetiae_contig1049:6764..6946 | 1622815272.740866-CDS-L-elsbetiae_contig1049:6764..6946 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1049 6765..6946 - |
| 1691682809.53089-CDS-L-elsbetiae_contig1049:6764..6946 | 1691682809.53089-CDS-L-elsbetiae_contig1049:6764..6946 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1049 6765..6946 - |
| 1622815272.7526658-CDS-L-elsbetiae_contig1049:9213..9226 | 1622815272.7526658-CDS-L-elsbetiae_contig1049:9213..9226 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1049 9214..9226 - |
| 1691682809.5408897-CDS-L-elsbetiae_contig1049:9213..9226 | 1691682809.5408897-CDS-L-elsbetiae_contig1049:9213..9226 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1049 9214..9226 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1049.481.1 >prot_L-elsbetiae_contig1049.481.1 ID=prot_L-elsbetiae_contig1049.481.1|Name=mRNA_L-elsbetiae_contig1049.481.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=65bp
MNTEGEFQCLDAFLVALSQAFHGEEKRWHASTVQLDGVSKGVQKYPDLGC
ACRKSNHPQLVVPS* back to topmRNA from alignment at L-elsbetiae_contig1049:1422..9271- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1049.481.1 ID=mRNA_L-elsbetiae_contig1049.481.1|Name=mRNA_L-elsbetiae_contig1049.481.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7850bp|location=Sequence derived from alignment at L-elsbetiae_contig1049:1422..9271- (Laminarionema elsbetiae ELsaHSoW15)
AGAGGGTTGGGCAAGATCGGTGGAGAAGAGGAACAAAGCCTAGGCATGAA
TACCGAAGGTGAGGGATGGTCATGAGGCGAATGTAAGATGGATGAGCGAT
TGTTGTGTGCGTCAAGGGTCTACCTGGATCCAAATTTGGACACATAGCCC
CCCCCCCCCCCCCCGGAGGAGAAATGTTTCGATAATTGCCCCTGTCCTTT
TGAAACATATTTGTAATTTTGATTTAGGCAAGTAAGTTACAGTACCTTGA
AATATCTTGAAAAAGCTTGAAAATACTGAGAACAATCGGTAGGTGGGTGT
TGGTGTTGCTAATACCTTGCAGTGAGTTCGCCCGGTCTCAAACACGTGTA
CCTACACCATGCAAGCCAACGGGAGCCTGTCGACTCCTCCCGAACTTGTG
CTGTAGTCCGCGTAGCAACGGTATCACACGCCCTTTGGTAAATAAACTCG
CCCTTCCTTGGCCCAGTAGGCACCTACATCTTGGACAGGGGACTTGACCG
CATAGAGAAAATCATTCGATTTACCCAGCTACATCCAAGGCGTTGGAGCA
ATATCTTCGCGAACAGTCGCCGTGAGTCGTCTGCCTGTCCTACTCTTGCG
TACGGGTTCTTCCACGTTCTCGCGCGGCGGTGGCGCACTACTGCTGCTGT
TCCTCCCTACTAATCGTCGCCTTTTTGGCGACCTTCCTTCTCCTAGCCCC
CCTTCCTCTTCTGCCGACGCATGCATAGTGTTCTTGCGAAACACATGTTG
TCCGCATGTACACACCCAGTGTTTTTCCTCTGACCATGATGTAAGACGGG
CAAATCGCGGGGAAGCCGCTGCTCCAATAGACGCAACGGGGCCTTCGCTA
GTGGAAGGAGCAACTGATGAGCTCGGGGGGCGTGGGGTGTCCGCCATGTC
AGCGATCTCCACGTCAAGGGGCCGCGTACTACTGCTGTGTAACAGCAGCG
GCCTATACTCGCAAAAGCCTCGGCGAAAAAGTAGGGGATGACCCTTTGGG
TATCCCCGCCCCCCCCCTTCCCCCCCTAAAAATTCCGAAATTTCGATCTT
GGGGCCTAAAAATTGTCCAAAATTTGGATCCACGGGTAGACCAAAATAAC
GAATATGTTATTTCAGAGGGCAGAAATAAAACTGCGTGGCGTGTTTAAAC
GAACATCAGCTTTGGATCTTCATTGTGCGTTCAATTTGCCAAAATTGGCC
ACGCTTTTTGTACTACAACTTGCTTGTCTCGCCCTCCTCAGTATTCGAAA
CCCTCGCTACACATTGTACGTACACACCCCACATCCACGCCAACAAGATG
TAGTTATACCCTGAACACCGATTGAGCCCTTTTCGGATCCTGCTGAGTCG
ACTCAAAGGGTGTCGTATCCTCTTCTGGTGGGCGAGAACAACGCCAGCCA
GATCAACGTGATACATTACCCGCCTAAGGTGAGCCCGCGGGGCCCCCATA
TTCCTGTTTCTTGACAAGTACGCACACTCCCGTCTTCCAACGTTCATATT
TAAAAAACACCAATGCATTCAGAAAACCACATTTCTCCTATCGAAATGAA
CCGTACTCATTGCTTTTCGAACCGAGGTTCCGCTCCAAATCCACACTGAA
CAAAGCACTTGACCTGTTGTAGTCGTCTAGTCAATGTAGATAGATAGATG
AAACTACTTGAACCGATGACCGTTGCGGCAAAAGTTCTTGTTGAATCTAG
TCTAGAAGGCTGCTTCGGACGTAGATTGTACCTTCAACCCGGTTAACGAT
TGATTCATCGTTGCCGCAAGTGAACAACGGTTAGTCTATGGAGTGAGTCG
CGAAGCCGACCAAGCGAGGACGGAGGAAGACGAGGAGGCGAGGAACGAGG
TCAACAAATGCGCGCTAGTGCTTGAGGCCGCTCTGCAATCCTGATACCAT
AAGCATGTCGTAGCGTGCAGTTTCCTTGTGGGCGAGAAACTTGTCTTGTT
CACGAAAACATCGTTCTCCTGCCTGTCAACTGCCTCTCTGTTTTCTTCGT
TCCCAAACTCGCAATGTGTCCAGGGGAGGTTTAGTCTGGTCCAGTACAGA
GGCTGGCGCCTAATGTTTTGGGTCACATCTTGAGGCATCCATCAGATTCA
CTCAGCCTTAACCTCCGCGTAGATAGATTCCTCCTAGCCTCCTAGCTGAG
ATTTCCCCCTCTCCATGAGCCTCTCAACTGAGGCACCCTGAGATTTAGTG
CTTTGTGCTTTCGGAGCGAGCGTGACGTTCTCTGAGTCATGCATGCCCCC
GCCGCGATAAAGCGACTCTGTTCCAGGCAACACTGAACCATGATTTGCTG
TTGCCCTTATGTTTGCCATTCTCAGGGGAATTTCAATGCCTCGACGCCTT
CCTTGTCGCCTTGAGCCAAGCGTTTCACGGAGAGGAGAAACGTTGGCATG
CGTCCACTGTACAGCTCGATGGAGTTTCGAAGGGCGTGCAGAAGTATCCC
GACCTAGGCTGCGCGTGTCGAAAATCTAACCACCCTCAACTTGTTGTGCC
CTCCTGAGTCATGACGCACGCAGCTCGTCGAAGAAGGTGCGAATCTCGAG
TCGCGCGCCGGGTCTGGCGCGTGCTTTTCTTTTAAGCGCTTCCGGTTGAG
GTTCTGTTGCAGAGTATCGCGGCCGAGCTGTGGAGGAGGTTGGAATGTTT
TGGGCCTCGGGGGATCGGATTTGAGTTTAGCCTAGAGTCATTGACTTGGC
CCTCACGACCAAAAAAAAGTGCTACTCCGAGTATTTAGTACTGCTTCCAG
GCAGCCATAAAAGAAGTGCCGTGGCCGCCCTCTCTTGAACATCTAGTGCT
GGGGGACCGTTTCAACCAGCCCATCACCGACGTCTCTGCAGCAATTGTTC
AGCCTTGGCTTTAACCAGGAGTCAGTCGTGTGAGCCAGTGTCTGCAGCAG
TTGCCTCGTTTGGGGTTCATTTCAAACAACCCATCGCCGGAATCGTGTGG
TCGGCCTCCCTGCAGCATACATCATTCGGATGTTGGTTCAACCAGCCCAT
CGCCGGGTTAGTGCGGCCGGCTTTTCTGCAGCAGCTAAAATTCGGGTATA
AATTCATCCACCCCATCGCCGGCGTTGCGTGGCCCCCCTCCCTGCAATGG
CTTTTGTTTGGGTGGCGCTTCAACTACTCCATCGCCGGAGTTATGTGGCC
GGATTCCTTGCAGCGTATATATTTCGGACGATGTTTCAACCAGCCCATCC
CTGGAGTTTTGTGGCCTGTCTCCCTGCAGCAGTCATCGTTCAGGGAGCGC
TTGAAACAGCCCGTCGAAGGAGTTATGTGGCCGGCCTCCCTCCAGCAGCT
ATCGTTCGAGATTGGCTTGGCAATCTATCTATGGCCGGGATCAAGTGGCT
GCCCTCCCTTCAGCGGCTGCCGCTCTGGGCTTCCTTCAACCAACCCATCG
TCGGAGTTGTTGTCGGCACATTTTTCATAGGGCCACCAAGGGTCTGTCAG
AAGGAAATTCGATACACGTAGGCCCCAAAATCGAAATTTTGAGTTCCTGG
AGGGGGGGGGTGGCTGTAGCCTGCTGTATAATTTGTAGTGGGGGTCCCGC
AGATTACAGTGGGCGTGGTGGGGGCGTGGGAGTTGAATAGCCCCGAACGG
ATCACCCTATATACTAATTCATACATAGACAAAAAATGAAAATACGGGTC
CCGCGGGGTGGCCCACGTGTCCAGAATTTTCCTCCTGATAGACCCTTGGG
CACACAACAATACAGACAAAAACGGCTTCCAGAGTTTCTTCACATAAAGA
AGTGTGTAGACTAAACCCGCGGGACTGTACCACCGTCGTTTGTGGTGCAC
TGGAGGCTTTGGTACGGCCGGCAGAAGTCTGATCACACTAATCCCGGCAT
CCTTCACGTTGCCACGATGCGCAACGTTGTCCGACTTGGGGTGTATCTGC
TGTGTGATTAATGGGTACTTTTTCGGAGAGTTCAAAATCGTCCATTCCAA
AAAGAGGTTGCGTGCACCCTCAACAGCATGTTATTGACGAGGGGCTCGTA
TCCTTCCCACACACTGCATGTATGCGCATGTGTGCTGTCGATTTTCAGAA
GGGATTTCGCTCGTCTTCTGAGGTACTTTCAACTGAAAGAACCACCATTC
TCTCAGCAGCTGCTCGTGATACCACCACGCTCGTGTGAGCTCCCTAGTTG
GTGCCCGCGGTGTGTTGAGAATACGCCATATTCGTAGAATAATAATAATG
GACGATGTGCTCTAGATACAAAACTTGGAACAGCAACTCTGGATTCTTCA
CGGACAACGGCTGACAAACATTGACAAATGGCGCATGCCCTATCCCAGAG
AGGCTGCGCAGACAGGAACTACCATTTCCCCGCTGTCCCTTCCAAAATCA
TACTGGTACTGGGTGCGAGAACAACAGGATACGATCTGAACGATGGCTGG
CAAACGAAACTCCACATTGCCGCAACTTTTCGGGTTACCCCGCTCTGGCT
CAATGCGCTGCTTGTTTCAGAGAAGGACCACCCTCCCCCCAGGACGCCGA
CAATGAAATAGGCATGTCTCAGTAGGTCTGTCCTCCTCAAACAAGTCAAC
GCTGCTATATATCTAGAATCAGATAAATCAGCAAATCTGCATCATGGCTG
TCGTTTCCGCCGATGCCCTCCCTCCCTTCCGCGTGCCCTGGGGGCTACCG
CCTCGATCGACACCAATCCTCTTTCGCCAAGGACCCCCAACGCCCCACCC
ATGGCCCGCCTCCCAGCGTCACGCGAGACAGGTCCCATCCTTCCCGAATC
AAGGCCTTCTGGAACACGGGGAACTCCTTCCTGCGTGCAATGCCCGCCGT
GTCGCGTTGTTGTAATGTTCGCCGGGAGGAAGGGGGTGACGATAGAACAA
CAGTCAGTCGAGAGAAACAACGCGAGGAAGGGGCGAAAGTAAGGGGCAGA
GCCAAACCGCCGGGGAGCAATTATTCGGGTGGACACCGGTGGCCCGTTGT
CGTCTGGAGATTCCCCTTGAAATGCAGCGAATCAACAACTGTTGAAATAG
ATATTTCCACCCACGTAATAAGCGAAAACCTGTTGCGCAACATTAAAAAG
CTTCTTGCATCTCCCACCTGGAACTTGCCTCCAAAAATCGATGAACTGGT
CCGGCCTTGTAAGATGTTGACACTACAAAACGCACAACATGACAGCTACT
TTATGTCAGCCCTGGGGTGGTATGTTCTGAGGTAGTCGCCGAATCATGCC
ACGAGCTCCACGAAAATATTACGAGGTGGGCTGTAGGTTTGATCGACCTT
CAATACGATTCACGGGAGACCCAAGTCTCCCACCTTCTACGTAGTGTCTT
CCTACTCTGCTAGAAACCCACCTTGTCACGCGTAACGCCTCCTCCGCGAC
CTTACGCAAAAATAGGGTCCTTTCCACACCGTCCCCTCCCTGGGGTATAC
TGTCGGGATCTCTAACCAGCAGCCGGTGAATAACATTCGCCTGTCGGGGT
AAGCGACCGTTATAGCAAAAACATCGATATAGACAAGCACCCGGCATCAC
TCACGACGCAAGGAGAACGCGAGCCACAAGAAAAACAATAGACGTAGTAG
GGATGCATTTGTACCAAAACCATGCGCTGGAGCACGCCGTCTGCCGCTCT
CCCTGATTTTCCGCCGCTCCTCAACTCAACCTTTGTAGGGAGACCAGGTG
AACTTCACCTGAAACATGGCCTGCAAACGATCCTTCGCGGAGGCGTCCTC
TCGAAGGGCTAAGTTAACCTTCGTCTCCATCCTGATCCCCCCGCCCCCAC
AGACAGCGAGACGGAGCAGTGCATGCACACGACACGGGGGAGAGGGAGAC
AATAACCTTCAGCTAGGCGCACTAAACAGTAACTCTCTTGTCTGGTTCAT
CGTAGCATACTCCGTTGCCGCTGAATGCAGGTACAATCATCGGTAAGAAA
CGCGTGCTGCTGCTGCTCCTGCTGTTGCTGCTGCTGCAGCAGCAGCGGCT
GCGGCATCGAAAAACGCTCGCTTGGCCACGGCTTCGCAACCACCTTGTCT
AGACGACCAATCACCTTTACTCATACTGCGTAGTCCGGCAGCCTCTTCCT
AGCGAATTCGAGAGTTCGAACTACTGTATGATCCGGTCAACGCCAAACCG
AGTAACCGAACCCGGAACACTTAAAAATCGCCAACCGCCGCATATTATGC
CGCACCACACACCTCGCTCCCAGAGGCTTGTAGGACACTTGCACTTCGAC
CATCGTTTTCTCGTCGTGGTAGAGGGACGTCAGCCACAGCAAGTCATCTG
CTTCCCGAACCAGCGCTCGCACCGGGACCCCCACGTTGATCTGTTAACGC
GCCCGGACCGGCACACACCAACACGTGCAGCACGCACGGACGTTAGTCGA
GAAAACACATGCCCCGAGTTGGCTTGTGCTGCGGCGCATTTCAACGCATG
CGTTCACACAAACGGAGCTAACAGCGGAGGCTGAAGGGGGCGGACGACGC
GGTTCGGAAGGGGCCTTACCAAATTCGTGTGTTTCCCTTTCCCGAATGCT
TTTAACATCGCGTTTTAGGGTCGGTAGTTTCACGCGTATGTGCGCGCAAT
TGTACCACGACACGCAATTTTGCGGGCGGATAACACATAAACTCCGCTAC
CGGATGCACGCGCGGCACGTCAAATACATTCACGTCAAAATAGAGATTGT
AGAATTTGATAAAGGACACAAAGAAACCAGTATGAGAGGAATGTCGCGCC
GGCGGCATACCCCGGTCCCTCTCTCGAGCAGCCACTTTCCGCGCCCGAAA
TTTGCCATTTTTCAATGCCGGTTCTCTCGAGAAATGCAATTTCTATAATC
CGCGCTGCAAAACAATTTCCCGGACGTTTGTTTAAGTTCTCCCCCCCAAC
AAGGAGAAAAACAGGAGAACATATTCCCCCCTCACAATTGAGGTTGATCG
CTTGGGGTTCAAAATAATTATGTTGTCTTCTCATCACCTGCAGAAAGTCC
CCCCAAGGCTTGAACGCCCGCACCCAACCCGGCAGCATGATGATTCTCTC
CCGCCTGGCCGCTGCGAAGGGCGAAAGCACCCCCGGCGTGGGAAACTCAC
GGTGCTTTGCTCTCCCCATCCAGTCCACTGCCGGAGGAGCCTCGTCCTGC
TCCTTCTCGCCCCTGTCATCTTCGCCGCCATCCTTCTCCCGCTCCTCTCC
CTCCCGCTGCTGCTGACCATCTTCGCTCTCCCCGCCCCCCTCGCGACCCT
CGTCGCCTCGACTGCTTTGCTCCGGCGACCCGAACGCCTTGGCGTCGTGC
ACAACGGACATGTCGACCAGCAGCAGCACCGCAGCGGGGGTCGCAAAGGC
AGGTTTCAGGTGTGCAAACACAAAAAAGGAGACACCGATAGATACAACCG
ATAAAAAAAACAACAAAAGCGCACGTTGAGAGGGTTTGAAAGGGTTTGAG
TTGAAAAGAGCGGGCGCATCGACTCCGACAGCTTTGTACAAAGCAGCAAA
TCAGCAGCGCACCCGGGCACCTCTTTTCCTCTCTGTCCCGTCGGCTAGTC
CACCGACAGACAAGGCTCAAAGGCGACCGAAAAGATGCCGACGCAAGCCA
CATCCAAGTCTCCGAGATGGCTCACTTGGAGCTGCTCGCTTGAGGCACCC
ACTCTGCACCTGCTCACCTCCGAGGAGACGGCGGAAAACAAGCCTGAGCT
GCTGTGTTCCCACGACGATACACACAACGACGCCACCACCACCACCACCA
CCACCACCACCGTGAACCGCGTCTACAAAACCCAAAGAAAGCATCAACTC
GTTCGTGTTCTTGTCTCCCTCTCTTCCCCGCACCGCACCTGCCCCAGGTA
CTCCGTGACGAGCAACGAAGCGCGTGTCGGGTTCAGGGATCTCAGCGCCA
back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1049:1422..9271- >mRNA_L-elsbetiae_contig1049.481.1 ID=mRNA_L-elsbetiae_contig1049.481.1|Name=mRNA_L-elsbetiae_contig1049.481.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=390bp|location=Sequence derived from alignment at L-elsbetiae_contig1049:1422..9271- (Laminarionema elsbetiae ELsaHSoW15)
ATGAATACCGAAGATGAATACCGAAGGGGAATTTCAATGCCTCGACGCCT
TCCTTGTCGCCTTGAGCCAAGCGTTTCACGGAGAGGAGAAACGTTGGCAT
GCGTCCACTGTACAGCTCGATGGAGTTTCGAAGGGCGTGCAGAAGTATCC
CGACCTAGGCTGCGCGTGTCGAAAATCTAACCACCCTCAACTTGTTGTGC
CCTCCTGAGGGAATTTCAATGCCTCGACGCCTTCCTTGTCGCCTTGAGCC
AAGCGTTTCACGGAGAGGAGAAACGTTGGCATGCGTCCACTGTACAGCTC
GATGGAGTTTCGAAGGGCGTGCAGAAGTATCCCGACCTAGGCTGCGCGTG
TCGAAAATCTAACCACCCTCAACTTGTTGTGCCCTCCTGA back to top
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