mRNA_L-elsbetiae_contig10483.471.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10483.471.1
Unique NamemRNA_L-elsbetiae_contig10483.471.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10483.471.1 vs. uniprot
Match: A0A835Z4L4_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4L4_9STRA)

HSP 1 Score: 305 bits (781), Expect = 7.670e-99
Identity = 148/183 (80.87%), Postives = 163/183 (89.07%), Query Frame = 1 
Query:    4 THVLKLCDFGSAKILVRGEPNVSYICSRYYRAPELIFGSTDYTCAIDTWSLGCVAAELLLGEPLFPGDSGVDQLVEIIKVLGTPTREEIRAMNYNYSEFKFPQIKAHPWKGVFRSRTPPEALDVVSKMLAYDPLKRIKPLEVCSHEFVDELRQDGVMLPNGNALPTTLFEFTELELSNNPRLA 552
            +HVLKLCDFGSAKILV+GEPNVSYICSRYYRAPELIFGSTDYTC+IDTWSLGCV AELLLG+PLFPGDSGVDQLVEIIKVLGTPTREEI+AMN NY+EFKFPQIKAHPWK VFRS+TP EA+DV+S MLAYDP +RI+ L+VC+H F +ELR     LPNG ALP  LF FT+LELS NP LA
Sbjct:  250 SHVLKLCDFGSAKILVKGEPNVSYICSRYYRAPELIFGSTDYTCSIDTWSLGCVGAELLLGQPLFPGDSGVDQLVEIIKVLGTPTREEIKAMNSNYTEFKFPQIKAHPWKEVFRSKTPDEAVDVISAMLAYDPERRIRLLDVCTHPFFNELRHPDTRLPNGGALPV-LFNFTDLELSLNPVLA 431
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BLAST of mRNA_L-elsbetiae_contig10483.471.1 vs. uniprot
Match: A0A7S2BY47_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BY47_9STRA)

HSP 1 Score: 286 bits (732), Expect = 1.620e-92
Identity = 138/188 (73.40%), Postives = 152/188 (80.85%), Query Frame = 1 
Query:    4 THVLKLCDFGSAKILVRGEPNVSYICSRYYRAPELIFGSTDYTCAIDTWSLGCVAAELLLGEPLFPGDSGVDQLVEIIKVLGTPTREEIRAMNYNYSEFKFPQIKAHPWKGVFRSRTPPEALDVVSKMLAYDPLKRIKPLEVCSHEFVDELRQDGVMLPNGNALPTTLFEFTELELSNNPRLAPSNMP 567
            THV+KLCDFGSAK+LV GEPNVSYICSRYYRAPELIFGSTDYT AID WS GCVAAELLLG PLFPGDSGVDQLVEIIKVLGTPT+ EI +MN NY+EFKFPQIKAHPW  VFR RTPPEAL++V +MLAY P +R+ PL  C+H F DELR     LPNG ALP  LF FT++EL   P L    +P
Sbjct:  165 THVVKLCDFGSAKVLVAGEPNVSYICSRYYRAPELIFGSTDYTTAIDVWSQGCVAAELLLGAPLFPGDSGVDQLVEIIKVLGTPTKAEICSMNPNYTEFKFPQIKAHPWGKVFRPRTPPEALELVPQMLAYSPSERVTPLGACTHAFFDELRDPNTRLPNGQALPNDLFSFTDVELKIQPSLNDQLIP 352
[Close]
BLAST of mRNA_L-elsbetiae_contig10483.471.1 vs. uniprot
Match: A0A850VQ52_FREMA (Glycogen synthase kinase-3 beta (Fragment) n=1 Tax=Fregata magnificens TaxID=37042 RepID=A0A850VQ52_FREMA)

HSP 1 Score: 280 bits (717), Expect = 3.300e-92
Identity = 137/188 (72.87%), Postives = 151/188 (80.32%), Query Frame = 1 
Query:    4 THVLKLCDFGSAKILVRGEPNVSYICSRYYRAPELIFGSTDYTCAIDTWSLGCVAAELLLGEPLFPGDSGVDQLVEIIKVLGTPTREEIRAMNYNYSEFKFPQIKAHPWKGVFRSRTPPEALDVVSKMLAYDPLKRIKPLEVCSHEFVDELRQDGVMLPNGNALPTTLFEFTELELSNNPRLAPSNMP 567
            T VLKLCDFGSAK LVRGEPNVSYICSRYYRAPELIFG+TDYT +ID WS GCV AELLLG+P+FPGDSGVDQLVEIIKVLGTPTRE+IR MN NY+EFKFPQIKAHPW  VFR RTPPEA+ + S++L Y P  R+ PLE C+H F DELR   V LPNG   P  LF FT  ELS+NP LA   +P
Sbjct:   35 TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWSKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGREKPA-LFNFTSQELSSNPSLASILIP 221
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BLAST of mRNA_L-elsbetiae_contig10483.471.1 vs. uniprot
Match: A0A1Z5LB52_ORNMO (Glycogen synthase kinase-3 beta (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5LB52_ORNMO)

HSP 1 Score: 281 bits (719), Expect = 3.910e-92
Identity = 133/183 (72.68%), Postives = 153/183 (83.61%), Query Frame = 1 
Query:    1 QTHVLKLCDFGSAKILVRGEPNVSYICSRYYRAPELIFGSTDYTCAIDTWSLGCVAAELLLGEPLFPGDSGVDQLVEIIKVLGTPTREEIRAMNYNYSEFKFPQIKAHPWKGVFRSRTPPEALDVVSKMLAYDPLKRIKPLEVCSHEFVDELRQDGVMLPNGNALPTTLFEFTELELSNNPRL 549
            +T VLKLCDFGSAK+L++GEPNVSYICSRYYRAPELIFG+TDYT  ID WS GCV AELLLG+P+FPGDSGVDQLVEIIKVLGTPT+E+IR MN NY+EFKFPQIKAHPW+ VFR+RTPPEA+D+VS++L Y P  R  PL+ C+H F D+LR+ G  LPNG  LP  LF FTE ELS  P L
Sbjct:   31 ETGVLKLCDFGSAKLLIKGEPNVSYICSRYYRAPELIFGATDYTTMIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTKEQIREMNRNYTEFKFPQIKAHPWQKVFRARTPPEAIDLVSRLLEYTPSARTTPLQACAHAFFDDLREPGARLPNGRDLPP-LFNFTEQELSIQPHL 212
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BLAST of mRNA_L-elsbetiae_contig10483.471.1 vs. uniprot
Match: A0A0P7UQH3_SCLFO (Glycogen synthase kinase-3 beta n=2 Tax=Osteoglossocephalai TaxID=1489341 RepID=A0A0P7UQH3_SCLFO)

HSP 1 Score: 282 bits (722), Expect = 6.190e-92
Identity = 142/210 (67.62%), Postives = 161/210 (76.67%), Query Frame = 1 
Query:    1 QTHVLKLCDFGSAKILVRGEPNVSYICSRYYRAPELIFGSTDYTCAIDTWSLGCVAAELLLGEPLFPGDSGVDQLVEIIKVLGTPTREEIRAMNYNYSEFKFPQIKAHPWKGVFRSRTPPEALDVVSKMLAYDPLKRIKPLEVCSHEFVDELRQDGVMLPNGNALPTTLFEFTELELSNNPRLA----PSNMPSSSGGDGKLQAGGAGDA 618
            +T VLKLCDFGSAK LVRGEPNVSYICSRYYRAPELIFG+TDYT +ID WS GCV AELLLG+P+FPGDSGVDQLVEIIKVLGTPTRE+IR MN NY+EFKFPQIKAHPW  VFR RTPPEA+ + S++L Y P  R+ PLE C+H F DELR   V LPNG   P+ LF FT  ELS+NP LA    P++  + +G      A  A DA
Sbjct:   87 ETAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTASIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGREKPS-LFNFTTQELSSNPSLASILIPAHARNQAGASTPTNASAASDA 295
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BLAST of mRNA_L-elsbetiae_contig10483.471.1 vs. uniprot
Match: A0A851D188_CALVR (Glycogen synthase kinase-3 beta (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A851D188_CALVR)

HSP 1 Score: 279 bits (714), Expect = 9.420e-92
Identity = 137/188 (72.87%), Postives = 151/188 (80.32%), Query Frame = 1 
Query:    4 THVLKLCDFGSAKILVRGEPNVSYICSRYYRAPELIFGSTDYTCAIDTWSLGCVAAELLLGEPLFPGDSGVDQLVEIIKVLGTPTREEIRAMNYNYSEFKFPQIKAHPWKGVFRSRTPPEALDVVSKMLAYDPLKRIKPLEVCSHEFVDELRQDGVMLPNGNALPTTLFEFTELELSNNPRLAPSNMP 567
            T VLKLCDFGSAK LVRGEPNVSYICSRYYRAPELIFG+TDYT +ID WS GCV AELLLG+P+FPGDSGVDQLVEIIKVLGTPTRE+IR MN NY+EFKFPQIKAHPW  VFR RTPPEA+ + S++L Y P  R+ PLE C+H F DELR   V LPNG   P  LF FT  ELS+NP LA   +P
Sbjct:   35 TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDKPA-LFNFTTQELSSNPSLASILIP 221
[Close]
BLAST of mRNA_L-elsbetiae_contig10483.471.1 vs. uniprot
Match: H3AT65_LATCH (Glycogen synthase kinase-3 beta n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AT65_LATCH)

HSP 1 Score: 280 bits (717), Expect = 2.740e-91
Identity = 137/189 (72.49%), Postives = 152/189 (80.42%), Query Frame = 1 
Query:    1 QTHVLKLCDFGSAKILVRGEPNVSYICSRYYRAPELIFGSTDYTCAIDTWSLGCVAAELLLGEPLFPGDSGVDQLVEIIKVLGTPTREEIRAMNYNYSEFKFPQIKAHPWKGVFRSRTPPEALDVVSKMLAYDPLKRIKPLEVCSHEFVDELRQDGVMLPNGNALPTTLFEFTELELSNNPRLAPSNMP 567
            +T VLKLCDFGSAK LVRGEPNVSYICSRYYRAPELIFG+TDYT +ID WS GCV AELLLG+P+FPGDSGVDQLVEIIKVLGTPTRE+IR MN NY+EFKFPQIKAHPW  VFR RTPPEA+ + S++L Y P  R+ PLE C+H F DELR   V LPNG   P  LF FT  ELS+NP LA   +P
Sbjct:  100 ETAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGREKPA-LFNFTTQELSSNPSLASILIP 287
[Close]
BLAST of mRNA_L-elsbetiae_contig10483.471.1 vs. uniprot
Match: A0A851A521_SULDA (Glycogen synthase kinase-3 beta (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A851A521_SULDA)

HSP 1 Score: 280 bits (715), Expect = 2.960e-91
Identity = 137/188 (72.87%), Postives = 151/188 (80.32%), Query Frame = 1 
Query:    4 THVLKLCDFGSAKILVRGEPNVSYICSRYYRAPELIFGSTDYTCAIDTWSLGCVAAELLLGEPLFPGDSGVDQLVEIIKVLGTPTREEIRAMNYNYSEFKFPQIKAHPWKGVFRSRTPPEALDVVSKMLAYDPLKRIKPLEVCSHEFVDELRQDGVMLPNGNALPTTLFEFTELELSNNPRLAPSNMP 567
            T VLKLCDFGSAK LVRGEPNVSYICSRYYRAPELIFG+TDYT +ID WS GCV AELLLG+P+FPGDSGVDQLVEIIKVLGTPTRE+IR MN NY+EFKFPQIKAHPW  VFR RTPPEA+ + S++L Y P  R+ PLE C+H F DELR   V LPNG   P  LF FT  ELS+NP LA   +P
Sbjct:   80 TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDKPA-LFNFTSQELSSNPSLASILIP 266
[Close]
BLAST of mRNA_L-elsbetiae_contig10483.471.1 vs. uniprot
Match: A0A452R1J6_URSAM (Glycogen synthase kinase-3 beta n=3 Tax=Laurasiatheria TaxID=314145 RepID=A0A452R1J6_URSAM)

HSP 1 Score: 279 bits (714), Expect = 3.340e-91
Identity = 137/188 (72.87%), Postives = 151/188 (80.32%), Query Frame = 1 
Query:    4 THVLKLCDFGSAKILVRGEPNVSYICSRYYRAPELIFGSTDYTCAIDTWSLGCVAAELLLGEPLFPGDSGVDQLVEIIKVLGTPTREEIRAMNYNYSEFKFPQIKAHPWKGVFRSRTPPEALDVVSKMLAYDPLKRIKPLEVCSHEFVDELRQDGVMLPNGNALPTTLFEFTELELSNNPRLAPSNMP 567
            T VLKLCDFGSAK LVRGEPNVSYICSRYYRAPELIFG+TDYT +ID WS GCV AELLLG+P+FPGDSGVDQLVEIIKVLGTPTRE+IR MN NY+EFKFPQIKAHPW  VFR RTPPEA+ + S++L Y P  R+ PLE C+H F DELR   V LPNG   P  LF FT  ELS+NP LA   +P
Sbjct:   62 TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPA-LFNFTTQELSSNPPLATILIP 248
[Close]
BLAST of mRNA_L-elsbetiae_contig10483.471.1 vs. uniprot
Match: A0A433TGW5_ELYCH (Protein kinase domain-containing protein n=2 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433TGW5_ELYCH)

HSP 1 Score: 283 bits (724), Expect = 3.780e-91
Identity = 140/190 (73.68%), Postives = 153/190 (80.53%), Query Frame = 1 
Query:    1 QTHVLKLCDFGSAKILVRGEPNVSYICSRYYRAPELIFGSTDYTCAIDTWSLGCVAAELLLGEPLFPGDSGVDQLVEIIKVLGTPTREEIRAMNYNYSEFKFPQIKAHPWKGVFRSRTPPEALDVVSKMLAYDPLKRIKPLEVCSHEFVDELRQDGVMLPNGNALPTTLFEFTELELSNNPRLAPSNMPS 570
            +T VLKLCDFGSAK+LVR EPNVSYICSRYYRAPELIFG+TDYTC ID WS GCV AELLLG+P+FPGDSGVDQLVEIIKVLGTPTRE+IR MN NYSEFKFPQIKAHPW  VFR RTPPEA+ +VS++L Y P  RI PLE CSH F DELR     LPNG  LP  LF FT+ EL+  P L  S +PS
Sbjct:  166 ETGVLKLCDFGSAKVLVRAEPNVSYICSRYYRAPELIFGATDYTCQIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYSEFKFPQIKAHPWSKVFRPRTPPEAILLVSRLLEYTPSGRITPLEACSHTFFDELRDPTTRLPNGRDLPP-LFNFTQTELAIAPSLNSSLIPS 354
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10483.471.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4L4_9STRA7.670e-9980.87Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S2BY47_9STRA1.620e-9273.40Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A850VQ52_FREMA3.300e-9272.87Glycogen synthase kinase-3 beta (Fragment) n=1 Tax... [more]
A0A1Z5LB52_ORNMO3.910e-9272.68Glycogen synthase kinase-3 beta (Fragment) n=1 Tax... [more]
A0A0P7UQH3_SCLFO6.190e-9267.62Glycogen synthase kinase-3 beta n=2 Tax=Osteogloss... [more]
A0A851D188_CALVR9.420e-9272.87Glycogen synthase kinase-3 beta (Fragment) n=3 Tax... [more]
H3AT65_LATCH2.740e-9172.49Glycogen synthase kinase-3 beta n=1 Tax=Latimeria ... [more]
A0A851A521_SULDA2.960e-9172.87Glycogen synthase kinase-3 beta (Fragment) n=2 Tax... [more]
A0A452R1J6_URSAM3.340e-9172.87Glycogen synthase kinase-3 beta n=3 Tax=Laurasiath... [more]
A0A433TGW5_ELYCH3.780e-9173.68Protein kinase domain-containing protein n=2 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10483contigL-elsbetiae_contig10483:2203..5813 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score180.6
Seed ortholog evalue5.2e-43
Seed eggNOG ortholog2880.D7FW20
KEGG koko:K03083
KEGG Pathwayko01521,ko04012,ko04062,ko04110,ko04150,ko04151,ko04310,ko04340,ko04341,ko04360,ko04390,ko04510,ko04550,ko04657,ko04660,ko04662,ko04711,ko04722,ko04728,ko04910,ko04916,ko04917,ko04919,ko04931,ko04932,ko04934,ko05010,ko05160,ko05162,ko05164,ko05165,ko05166,ko05167,ko05169,ko05200,ko05210,ko05213,ko05215,ko05217,ko05224,ko05225,ko05226,map01521,map04012,map04062,map04110,map04150,map04151,map04310,map04340,map04341,map04360,map04390,map04510,map04550,map04657,map04660,map04662,map04711,map04722,map04728,map04910,map04916,map04917,map04919,map04931,map04932,map04934,map05010,map05160,map05162,map05164,map05165,map05166,map05167,map05169,map05200,map05210,map05213,map05215,map05217,map05224,map05225,map05226
KEGG ModuleM00677
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0658@2759
EC2.7.11.26
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036
Ec32 ortholog descriptionGlycogen synthase kinase-3 beta (GSK-3 beta)
Ec32 orthologEc-01_003040.1
Exons5
Model size756
Cds size441
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815271.9992785-UTR-L-elsbetiae_contig10483:2202..22411622815271.9992785-UTR-L-elsbetiae_contig10483:2202..2241Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10483 2203..2241 -
1691682809.112619-UTR-L-elsbetiae_contig10483:2202..22411691682809.112619-UTR-L-elsbetiae_contig10483:2202..2241Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10483 2203..2241 -
1622815272.0487115-UTR-L-elsbetiae_contig10483:4493..45291622815272.0487115-UTR-L-elsbetiae_contig10483:4493..4529Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10483 4494..4529 -
1691682809.1585665-UTR-L-elsbetiae_contig10483:4493..45291691682809.1585665-UTR-L-elsbetiae_contig10483:4493..4529Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10483 4494..4529 -
1622815272.0603735-UTR-L-elsbetiae_contig10483:5299..54531622815272.0603735-UTR-L-elsbetiae_contig10483:5299..5453Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10483 5300..5453 -
1691682809.1712763-UTR-L-elsbetiae_contig10483:5299..54531691682809.1712763-UTR-L-elsbetiae_contig10483:5299..5453Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10483 5300..5453 -
1622815272.0731788-UTR-L-elsbetiae_contig10483:5727..58131622815272.0731788-UTR-L-elsbetiae_contig10483:5727..5813Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10483 5728..5813 -
1691682809.1832933-UTR-L-elsbetiae_contig10483:5727..58131691682809.1832933-UTR-L-elsbetiae_contig10483:5727..5813Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10483 5728..5813 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815272.0110383-CDS-L-elsbetiae_contig10483:2241..25051622815272.0110383-CDS-L-elsbetiae_contig10483:2241..2505Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10483 2242..2505 -
1691682809.1278055-CDS-L-elsbetiae_contig10483:2241..25051691682809.1278055-CDS-L-elsbetiae_contig10483:2241..2505Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10483 2242..2505 -
1622815272.0243647-CDS-L-elsbetiae_contig10483:3639..37291622815272.0243647-CDS-L-elsbetiae_contig10483:3639..3729Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10483 3640..3729 -
1691682809.138366-CDS-L-elsbetiae_contig10483:3639..37291691682809.138366-CDS-L-elsbetiae_contig10483:3639..3729Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10483 3640..3729 -
1622815272.0364847-CDS-L-elsbetiae_contig10483:4406..44931622815272.0364847-CDS-L-elsbetiae_contig10483:4406..4493Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10483 4407..4493 -
1691682809.1487904-CDS-L-elsbetiae_contig10483:4406..44931691682809.1487904-CDS-L-elsbetiae_contig10483:4406..4493Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10483 4407..4493 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10483.471.1prot_L-elsbetiae_contig10483.471.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10483 2242..4493 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10483.471.1

>prot_L-elsbetiae_contig10483.471.1 ID=prot_L-elsbetiae_contig10483.471.1|Name=mRNA_L-elsbetiae_contig10483.471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=147bp
MNYNYSEFKFPQIKAHPWKGVFRSRTPPEALDVVSKMLAYDPLKRIKPLE
VCSHEFVDELRQDGVMLPNGNALPTTLFEFTELELSNNPRLAPSNMPSSS
GGDGKLQAGGAGDAAPAASSSTAASAAAGGGGASGVGAGAAGLGQA*
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mRNA from alignment at L-elsbetiae_contig10483:2203..5813-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10483.471.1 ID=mRNA_L-elsbetiae_contig10483.471.1|Name=mRNA_L-elsbetiae_contig10483.471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3611bp|location=Sequence derived from alignment at L-elsbetiae_contig10483:2203..5813- (Laminarionema elsbetiae ELsaHSoW15)
CAGACACACGTGCTGAAGCTGTGCGACTTCGGCAGCGCGAAAATTCTGGT
CCGAGGGGAGCCCAACGTCTCGTACATCTGCAGCAGGTAACGATGGAAAA
ACGGGTATAACTTGTTTGTTTTGTGTAGTGGGCGCGGATGATATTAGGCT
CAAGCTGTGCCGCGCGCCGTCTACAGTCCACAGGCACTCTCCACTCGCCG
ACGGTTACTACTAGTCGTGTTATTCCGGCGCTGCATGACGAGCAGCAGTT
ACCAAGAGCACCAGCGAGGGCCTGGTTAGTTCCTAGATCTCTTTTCCCCC
CTTTGTGTCCCCCCCCCCCCCCCCCCCCCTCCGCTGCCCCCCTGTGCCCC
CCTGTGGCAGGTACTACCGAGCACCCGAACTTATATTTGGGTCGACGGAC
TACACGTGCGCCATCGACACGTGGAGTCTCGGCTGTGTGGCGGCAGAGCT
GCTGTTGGGGGAACCTCTGTTCCCAGGAGATAGCGGGGTGGATCAGCTCG
TGGAGATCATCAAGGCAAGCGACAAAAACACTTGGTCCACTTTGCGGTAT
TTTAGACAAGAGTGTGGTTCTGAGTAGGATCGATTTTGTTGAAGGAAGCG
TGATGGTCACCTCCGCTTGCGTGGGTGGCATATTTCCAAAGTTTTTCCGT
GTGGCGTTCCAATGTCGTTTGGAGAGAAGGAAAACCCGCCTGGTCCTTGG
ACTTCCGACACATGTTAATATGAACTTTGCGAAGAAGCGCACACGAATTT
CCAGTCGATCTGTCAAGGTGTTGGGAACTCCAGCAGTTCGAACGCTAGTA
TGTAACTTCTTGCAGGGTTTGTTGTGTTGGTGCATAACAGCGGGATGGGG
GTGGGGTGGTATGGCGTCAAGGGAAGGGACGAGTGTTTTGGAGAGAGAGG
GAGAGAGAGAGAGAGCGGCAGAGCGGCAGAGTCCGCGCGATATGCATTGC
TGGATAGAAATTGCTGTTGGCAAAATCGCATTGAAATATCTCGTGCTGAA
AGGCGAAACAACTGCACCCTCAAAAATGATACGTGGTGACGCCCAGGTGG
CACCACGAAAACACATCTCGACGGGCTGCACGTGCACGTGTGTAAAGACT
ATGTGGTTGTGCTGGGCACCTATATACTACCTGTGCACGCGTGCTTGGAT
GCTGTTTTGCGTTGCGTTTGCTCGCTTCCATCGGTCCGTTTGTCCATCTC
GTCCGCCTGAAATTTTGACGGCAGTACATGCTCTCCCTGTCTTTTAACCT
CCCACCACCCCCTGCCTTGCCTGCTGTCTCTCAGGTGCTGGGGACGCCGA
CACGAGAAGAGATCCGTGCGATGAACTACAACTACTCGGAGTTCAAGTTC
CCCCAGATCAAGGCTCACCCTTGGAAAGGCGTTTTCCGCTCAAGGACGCC
GCCCGAGGTAGGCTAGGCTAGAGCTAGGCTAGAGTTAGAGCTAGGCTAGA
TGACTGGACCAGCCCGGGCAGGCTACACGGGGGGGGGGCGCGCGGGGGGG
GGGGGGGGGGGCGAGAGTTTGTCTGGGCGGTGTCTCGCGTGCGCATTTTT
TTTTGTGTGACCTTGCATTTTCAACTCTCCTTCGCGATAATACGTACCTT
GTACAAGTTTTACCTCCACTTGTTTTTGGAGGGGGGGGGGGCGGGGGCGG
AAGATTTTGCCTCTTCAGATTGGTTCGACTTTTTTTTTAAAAGGCTCGTT
CGGGGGCCCCGTGCTGATCGAGGGTGCTTTGTCTATGCAAGACCTGGTTC
ACTGTGGAAGCGTTTGCCTAGTTGCGGCCTCGACACACGTCGTATACTGC
TACTGGACGTCTCAATCAATCAATGCAGCGTTCTCTACGCGATGGCTTCG
CCCGTTCTCTTGAGAATACGACGTATTTTCGTCTCTTTTAAGCGCTTTCG
CGCGCGCAAGGCAGTCAGTCGCGTGTATGATTACATGCTGCAGCATGCCG
ATTTTCCGCCTTTCGTGTCGTCTGTGTGTTGTGTTAAATATCCCTTAAAT
TTCCCGTCTCCCCCCTCCTCCCGCCCCTCTGATCCCGTTTTTGTCTTCTG
TCTCTTGGGTCGTGGTCTGCGTGGCGGCGAGCAGGCGCTGGATGTCGTAA
GCAAGATGCTGGCCTACGACCCGTTAAAGCGGATCAAACCGCTGGAGGTT
TGCAGCCACGAGTTCGTCGACGAGGTATGTGTACCCTATATACTAGTAGG
TAGATAAATATACCGGCGCTCGTTTATTTTTTTATTTATTATTGTCGGTT
TGAGCAGTCTCGTGTGGGGGAAGGGCGCAACCCCACACAGGCTGGTCTAG
GTTTAGACTAGTGTGGAGATGGTTGTTGGTCACATACCGTCATGTGAGTA
TTTATCTCGGCACCCCTCTACTAAAATACGCAATTTTCACGGCACCATGG
ATGTACGGGGTCTTGAGGCTGTTTCTGCGTGAACGAAGTAGAGCACTGAA
CCGCAGGTGGCCGACGGCCGGACTCTGCATAGTTTGCCCCAAGCGCTCGT
TTTGTTTTTTGTCCGTGTAGCCCGATTTATTCTGGTCTTCTTTTTTCCGT
TCCTGGGGTTTTTTGGCTTCACGTGTTTTCTGTTGGGGTGTGTCATACAT
ACATGGGTCCATTTTTTTTGTTTCCCCCGACTGTTTTCGAACAGCACCCG
ACCTTCGTTCCGTGTCCGCCTCTGCCTGTCATCATCCACGCACTTTTTTC
TCCCAGCTGTGCTTTCGGGTGCCGTAAAAAGGCCTCTATCCGGTTGTTAC
CTCATCCGCCCGAAATTCCGACCATTCCATCCCGTTTGGCCCACTGGCAC
GTATGTACGTGTTCTTCCTTTGGCCTCCACGTTCAAATTGTTTTCCTTTC
CGCATGTGACCACGGGTCAGCACTCTGGCAAAATGTCCTTCGTGGCAGGA
GCTTCTAGTGCTGGGAATAATAGATGTGAACGGAATAAAAAAGAAAAAAA
GAGACGGATCCTTCTCTGCTCGTATCGCACAGCACACCCGTTATGTGGAC
TCCCCCCCCCTGCCTTGCCTTGCCCCACCATGCTGCCTGCATGTGTAGGG
CTTACGCATCGCTTTTTTGGTTTGGTCTGGTCTGGTGTGGTCTCGCGGCG
ACGGCCCGCGCACCCACTGCTTTCGCTCCAACCACGGCACCATCTATCCA
CCCATCCATCAGCCCACCCACGCCGACGTCTTGTTCGGTTTTCGTGTGTA
TTAAGTTTGTGGTGATGTTTGTTTTTCTTACTTTCTCCATTCTCTTCTCT
CTTCGCTTCTCTTATCTTTTCACTGCTCTTATTTTCTCTTTTCTTCTCTT
GTCCGCAGCTGCGTCAAGACGGGGTCATGTTGCCCAACGGGAACGCGTTG
CCCACTACCCTCTTCGAGTTCACGGAGCTGGAGCTGTCCAACAACCCCAG
GCTGGCGCCGTCCAACATGCCGTCCTCGTCGGGCGGCGACGGAAAGCTGC
AAGCTGGAGGCGCCGGCGATGCGGCACCGGCCGCGTCTAGCTCTACTGCT
GCTTCGGCGGCGGCGGGCGGCGGAGGAGCTAGCGGGGTGGGTGCGGGGGC
AGCAGGATTGGGACAAGCGTGAGGGTTCATCGTCTGTGCGGCCTGCTCCT
TTCCTTGGCAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10483:2203..5813-

>mRNA_L-elsbetiae_contig10483.471.1 ID=mRNA_L-elsbetiae_contig10483.471.1|Name=mRNA_L-elsbetiae_contig10483.471.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=882bp|location=Sequence derived from alignment at L-elsbetiae_contig10483:2203..5813- (Laminarionema elsbetiae ELsaHSoW15)
ATGAACTACAACTACTCGGAGTTCAAGTTCCCCCAGATCAAGGCTCACCC
TTGGAAAGGCGTTTTCCGCTCAAGGACGCCGCCCGAGATGAACTACAACT
ACTCGGAGTTCAAGTTCCCCCAGATCAAGGCTCACCCTTGGAAAGGCGTT
TTCCGCTCAAGGACGCCGCCCGAGGCGCTGGATGTCGTAAGCAAGATGCT
GGCCTACGACCCGTTAAAGCGGATCAAACCGCTGGAGGTTTGCAGCCACG
AGTTCGTCGACGAGGCGCTGGATGTCGTAAGCAAGATGCTGGCCTACGAC
CCGTTAAAGCGGATCAAACCGCTGGAGGTTTGCAGCCACGAGTTCGTCGA
CGAGCTGCGTCAAGACGGGGTCATGTTGCCCAACGGGAACGCGTTGCCCA
CTACCCTCTTCGAGTTCACGGAGCTGGAGCTGTCCAACAACCCCAGGCTG
GCGCCGTCCAACATGCCGTCCTCGTCGGGCGGCGACGGAAAGCTGCAAGC
TGGAGGCGCCGGCGATGCGGCACCGGCCGCGTCTAGCTCTACTGCTGCTT
CGGCGGCGGCGGGCGGCGGAGGAGCTAGCGGGGTGGGTGCGGGGGCAGCA
GGATTGGGACAAGCGTGACTGCGTCAAGACGGGGTCATGTTGCCCAACGG
GAACGCGTTGCCCACTACCCTCTTCGAGTTCACGGAGCTGGAGCTGTCCA
ACAACCCCAGGCTGGCGCCGTCCAACATGCCGTCCTCGTCGGGCGGCGAC
GGAAAGCTGCAAGCTGGAGGCGCCGGCGATGCGGCACCGGCCGCGTCTAG
CTCTACTGCTGCTTCGGCGGCGGCGGGCGGCGGAGGAGCTAGCGGGGTGG
GTGCGGGGGCAGCAGGATTGGGACAAGCGTGA
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