mRNA_L-elsbetiae_contig1048.469.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1048.469.1
Unique NamemRNA_L-elsbetiae_contig1048.469.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1048.469.1 vs. uniprot
Match: A0A6H5JLS0_9PHAE (Rhomboid domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS0_9PHAE)

HSP 1 Score: 390 bits (1002), Expect = 1.330e-131
Identity = 217/310 (70.00%), Postives = 237/310 (76.45%), Query Frame = 1 
Query:  226 RSLTRCPMWPLRKSSSNLACSTWARSAASGNRMAGLSG--PRSGQ--------------LGGLRATKMELQGNRTLSSFLPRGGGFSDSLVVHGIVGLNVAGTLALFLHETQGTGGPFLFSNFMVSTYTTLTQGRLYTLFTSNFSHSHLWNGAIFSYMMYTLGPTAIQQLGRRQFLALYLLGGAFSQLCQVVGPEIARRLSLPTVLQVDRYFISSGGSGAVLAVLAWYCASFPGSQIILLVVPVQTGVAGALYLGSTLYQVVTNGAEVPFLGGPTQEIWRTLGAAAAGIXXXXXXXXXXXXXRYKFIQRH 1107
            RSL R P   L +S +  ACS+W RS AS       +G  PRS Q               GG R       GNR LSSFLPRGG +SDS++V+G+VGLNVAGT+A++LHETQG GGPFLF NFMVSTYTTL QGRL+TL TSNFSHS+LWNGAIFSYMMYTLGPTAIQ LGRRQFLALYLLGGAFSQLCQV GP IA RL LP+VLQVD Y+ SSGGSGA LAVLAWYCASFP SQIILLVVPVQTGVAGALYLG+TLYQVV+NGA VPFLGGPTQEIWRTLGAAAAG+             RYKFIQR+
Sbjct:   50 RSLARSPTVLLGRSGAKHACSSWVRSRASPPWSFARAGRLPRSLQHGSSVVPPCASWANQGGRRGVGA---GNRALSSFLPRGGRYSDSMIVYGVVGLNVAGTVAIYLHETQGAGGPFLFGNFMVSTYTTLMQGRLHTLLTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFSSGGSGATLAVLAWYCASFPSSQIILLVVPVQTGVAGALYLGATLYQVVSNGAGVPFLGGPTQEIWRTLGAAAAGVVVALASRGRGGG-RYKFIQRY 355
[Close]
BLAST of mRNA_L-elsbetiae_contig1048.469.1 vs. uniprot
Match: D8LNG3_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG3_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 4.400e-119
Identity = 179/221 (81.00%), Postives = 196/221 (88.69%), Query Frame = 1 
Query:  445 LVVHGIVGLNVAGTLALFLHETQGTGGPFLFSNFMVSTYTTLTQGRLYTLFTSNFSHSHLWNGAIFSYMMYTLGPTAIQQLGRRQFLALYLLGGAFSQLCQVVGPEIARRLSLPTVLQVDRYFISSGGSGAVLAVLAWYCASFPGSQIILLVVPVQTGVAGALYLGSTLYQVVTNGAEVPFLGGPTQEIWRTLGAAAAGIXXXXXXXXXXXXXRYKFIQRH 1107
            +V++G+VGLNVAGT+A++L+E+QGTGGPFLF NFMVSTYTTL QGRL+TLFTSNFSHS+LWNGAIFSYMMYTLGPTAIQ LGRRQFLALYLLGGAFSQLCQV GP IA RL LP+VLQVD Y+ SSGGSGA LAVLAWYCASFP SQIILLVVPVQTGVAGALYLG+TLYQVV+NGA VPFLGGPTQEIWRTLGAAAAG+             RYKFIQR+
Sbjct:    1 MVIYGVVGLNVAGTVAMYLYESQGTGGPFLFGNFMVSTYTTLMQGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFSSGGSGATLAVLAWYCASFPSSQIILLVVPVQTGVAGALYLGATLYQVVSNGAGVPFLGGPTQEIWRTLGAAAAGVMVALASRGRGGG-RYKFIQRY 220
[Close]
BLAST of mRNA_L-elsbetiae_contig1048.469.1 vs. uniprot
Match: U5GZS6_USTV1 (Rhomboid domain-containing protein n=3 Tax=Microbotryum TaxID=34416 RepID=U5GZS6_USTV1)

HSP 1 Score: 74.7 bits (182), Expect = 3.530e-11
Identity = 63/189 (33.33%), Postives = 96/189 (50.79%), Query Frame = 1 
Query:  406 SSFLPRGGGFSDSLVVHGIVGLNVAGTLAL-FLHET-QGTGGPFLF---SNFMVSTYTTLTQGRLYTLFTSNFSHSHLWNGAIFSYMMYTLGPTAIQQLGRRQFLALYLLGGAFSQLCQVVGPEIARRLSLPTVLQVDRYFISSGGSGAVLAVLAWYCASFPGSQIILL-VVPVQTGVAGALYLGSTLY 954
            SS + R   FS + +++ +V LNVA  LA  + H+  Q    P L     N   +++  +TQGR++ L TS FSH    +  +    +Y +GP  I  LG   FL+LYL  GA + L  +    +  RLSLP    +   + + G SGA+   L+++ A++P +  +L  VVPV      A  LG  LY
Sbjct:  131 SSLVARLNSFSPNTILYALVALNVAVFLAWQYAHQVYQQYRDPSLLRSLQNNFTTSWRNITQGRVWCLLTSCFSHEGTGHILMNLLSLYFMGPPVIMMLGNAGFLSLYLFSGAVASLTSL----LFSRLSLPHSQSLA--YSAHGASGAIYGCLSFFAAAYPRTTFLLFFVVPVPAWACVAGILGWDLY 313
[Close]
BLAST of mRNA_L-elsbetiae_contig1048.469.1 vs. uniprot
Match: A0A238FJB9_9BASI (BQ2448_4945 protein n=1 Tax=Microbotryum intermedium TaxID=269621 RepID=A0A238FJB9_9BASI)

HSP 1 Score: 73.9 bits (180), Expect = 6.880e-11
Identity = 61/189 (32.28%), Postives = 97/189 (51.32%), Query Frame = 1 
Query:  406 SSFLPRGGGFSDSLVVHGIVGLNVAGTLAL-FLHET-QGTGGPFLFSNFM---VSTYTTLTQGRLYTLFTSNFSHSHLWNGAIFSYMMYTLGPTAIQQLGRRQFLALYLLGGAFSQLCQVVGPEIARRLSLPTVLQVDRYFISSGGSGAVLAVLAWYCASFPGSQIILL-VVPVQTGVAGALYLGSTLY 954
            SS + R   FS + +++ ++ LN+A  LA  + H+  Q    P L SN      +++  +TQGR++ L TS FSH    +  +    +Y +GP  +  LG   FL+LYL  GA + L  +    +  RL+LP  L     + + G SGA+   L+++ A++P +  +L  VVPV      A  LG  LY
Sbjct:  141 SSLVRRLNSFSPNTILYALIALNLAVFLAWQYAHQVYQQYRDPSLLSNLQNNFTTSWRNITQGRVWCLLTSCFSHEGTGHILMNLLSLYFMGPPVMMMLGNVGFLSLYLFSGAVASLTSL----LFSRLTLP--LPQSLAYSAHGASGAIYGCLSFFAAAYPRTTFLLFFVVPVPAWACVAGILGWDLY 323
[Close]
BLAST of mRNA_L-elsbetiae_contig1048.469.1 vs. uniprot
Match: A0A2H0WF75_9PROT (Rhomboid domain-containing protein n=1 Tax=Bdellovibrio sp. CG10_big_fil_rev_8_21_14_0_10_47_8 TaxID=1975526 RepID=A0A2H0WF75_9PROT)

HSP 1 Score: 69.3 bits (168), Expect = 1.380e-9
Identity = 54/179 (30.17%), Postives = 92/179 (51.40%), Query Frame = 1 
Query:  433 FSDSLVVHGIVGLNVAGTLALFLHETQGTGGPFLFSNFMVSTYTTLTQGRLYTLFTSNFSHSHLWNGAIFSYMMYTLGPTAIQQLGRRQFLALYLLGGAFSQLCQ-VVGPEIARRLSLPTVLQVDRYFISSGGSGAVLAVLAWYCASFPGSQIILL-VVPVQTGVAGALYLGSTLYQVV 963
            +S S  V  I+ LN+ G   L+   T+ +   F+  NF+VS +T LT+GR++TL TS FSH+ L +  I  +++ + GP     LG++ FL  YLL    S LC  +V   I     LP +          G SGA+  ++  +   FP  +I++  ++P+       L++G  ++ ++
Sbjct:   84 YSFSGSVPWIIALNI-GVFILWHAATRESSLIFMADNFLVS-WTGLTEGRIWTLLTSEFSHNLLIHIFINMFVLNSFGPIVESVLGKKTFLLFYLLAAVVSSLCHSLVSAWILGEPDLPAL----------GASGAISGLVLLFSMLFPKQKILIFGLIPIPALWGALLFIGLDIWGLI 250
[Close]
BLAST of mRNA_L-elsbetiae_contig1048.469.1 vs. uniprot
Match: A0A1F3SGD3_9PROT (Rhomboid domain-containing protein n=1 Tax=Bdellovibrionales bacterium GWA2_49_15 TaxID=1797384 RepID=A0A1F3SGD3_9PROT)

HSP 1 Score: 66.6 bits (161), Expect = 4.380e-9
Identity = 63/181 (34.81%), Postives = 90/181 (49.72%), Query Frame = 1 
Query:  460 IVGLNVAGTLALFLHETQGTGGP-FLFSNFMVSTYTTLTQGRLYTLFTSNFSHSHLWNGAIFSYMMYTLGPTAIQQLGRRQFLALYLLGGAFSQLCQVVGPEIARRLSLPTVLQVDRYFISSGGSGAVLAVLAWYCASFPGSQII---LLVVPVQTGVAG--ALYLGSTLYQVVTNGAEVP 984
            I+ LNV   +  FL    G   P F+  NF+VS +T LT+GR++TL TS FSH+ LW+  +  +++Y+ GP   + LG  +F   YL  G FS     V    A  L  P +  +       G SGA+ AV+  +   FP  +I    L+ VP   G  G  AL L   + Q  T G ++P
Sbjct:   26 IIKLNV---VIFFLWYLIGFRLPLFMIDNFLVS-WTGLTEGRVWTLLTSVFSHNLLWHLFMNMFVLYSFGPALERILGFAKFFKFYLFAGIFSSFSHTV--VCAWLLDRPGLAAL-------GASGAISAVVILFALIFPKEKIFIFGLIPVPALGGALGLSALDLWGLISQ--TRGYDLP 191
[Close]
BLAST of mRNA_L-elsbetiae_contig1048.469.1 vs. uniprot
Match: UPI00199EF9F0 (Rhomboid family intramembrane serine protease n=1 Tax=Bdellovibrio sp. TaxID=28201 RepID=UPI00199EF9F0)

HSP 1 Score: 64.3 bits (155), Expect = 2.640e-8
Identity = 49/170 (28.82%), Postives = 83/170 (48.82%), Query Frame = 1 
Query:  460 IVGLNVAGTLALFLHETQGTGGPFLFSNFMVSTYTTLTQGRLYTLFTSNFSHSHLWNGAIFSYMMYTLGPTAIQQLGRRQFLALYLLGGAFSQLCQV-VGPEIARRLSLPTVLQVDRYFISSGGSGAVLAVLAWYCASFPGSQIILL-VVPVQTGVAGALYLGSTLYQVV 963
            +V +N+A  +A  L         F+ +NF+VS ++++TQGR++TL TS FSH+   +     Y++ + GP     LGR +FL  Y + G  S LC   V   +     LP +          G SGA+  ++  +   FP  +I+L   VP        L++G  ++ ++
Sbjct:    7 LVIMNIAVFIAWQLSRNDEVRYLFMANNFLVS-WSSITQGRVWTLITSVFSHNAFLHLFFNMYVLDSFGPIVESVLGRARFLKFYFIAGVISSLCHAAVSAFLLHEPGLPAL----------GASGAISGMIFLFALLFPKQKILLFGFVPTPALWGAFLFVGLDIWGLI 165
[Close]
BLAST of mRNA_L-elsbetiae_contig1048.469.1 vs. uniprot
Match: A0A8J1YNB6_9TREE (Rhomboid domain-containing protein n=1 Tax=Tremellales sp. Tagirdzhanova-0007 TaxID=2778382 RepID=A0A8J1YNB6_9TREE)

HSP 1 Score: 57.4 bits (137), Expect = 3.870e-6
Identity = 48/137 (35.04%), Postives = 73/137 (53.28%), Query Frame = 1 
Query:  529 FLFSNFMVSTYTTLTQGRLYTLFTSNFSHSHLWNGAIFSYMMYTLGPTAIQQLGRRQFLALYLLGGAFSQLCQVVGP-EIARRLSLPTVLQVDRYFISSGGSGAVLAVLAWYCASFPGSQI---ILLVVPVQTGVAG 927
            F+ +NF++S    +TQGR++T+ TS FSHS   +  +    +Y + P A   LG   FL LYL G +      ++ P ++A  LS+    Q DR+  S G SGA+ A L ++ +  P S I    LL +PV   + G
Sbjct:   11 FMLNNFVLSE-ANVTQGRIWTILTSAFSHSQGQHIILNCLGLYFIAPAAAGVLGSAGFLGLYLAGDS------ILPPWDVAPVLSICPD-QADRWSGSEGASGAIYATLGFWGSMSPQSTIYVYFLLPLPVWVFIGG 139
[Close]
BLAST of mRNA_L-elsbetiae_contig1048.469.1 vs. uniprot
Match: A0A5C5FS69_9BASI (Rhomboid domain-containing protein n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5FS69_9BASI)

HSP 1 Score: 59.3 bits (142), Expect = 3.930e-6
Identity = 46/161 (28.57%), Postives = 76/161 (47.20%), Query Frame = 1 
Query:  448 VVHGIVGLNVAGTLA------LFLHETQGTGGPFLFSNFMVSTYTTLTQGRLYTLFTSNFSHSHLWNGAIFSYMMYTLGPTAIQQLGRRQFLALYLLGGAFSQLCQVVGPEIARRLSLPTVLQVDRYFISSGGSGAVLAVLAWYCASFPGSQIILL-VVPV 909
            +V+G++ +NV   LA      L L     +   FL  NF VS +  ++QGR++TL TS FSH    +  +    +Y + P  +  LG   F+ LYL  G  +    ++      R         + Y+ + G SGA    ++++  +FP +  +L  VVPV
Sbjct:  134 LVYGLIAINVGVYLAWSYGNALALRFRDASWVRFLQRNFTVS-WQNISQGRVWTLVTSAFSHERTGHILVNMLSLYFMAPAVMAILGNSAFVGLYLFAGVTASTFSLLVNHFVTR---------NPYYAAHGASGATYGAISFFACAFPKTTFLLFFVVPV 284
[Close]
BLAST of mRNA_L-elsbetiae_contig1048.469.1 vs. uniprot
Match: A0A0F7SKV6_PHARH (Integral membrane protease of the rhomboid family involved in different forms of regulated intramembrane proteolysis n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SKV6_PHARH)

HSP 1 Score: 58.5 bits (140), Expect = 4.540e-6
Identity = 72/244 (29.51%), Postives = 110/244 (45.08%), Query Frame = 1 
Query:  373 TKMELQ----GNRTLSSFLPRGGG---------FSDSLVVHGIVGLNVA--GTLAL-FLHETQGTGGPFLF---SNFMVSTYTTLTQGRLYTLFTSNFSHSHLWNGAIFSYMMYTLGPTAIQQLGRRQFLALYLLGGAFSQLCQVVGPEIARRLSLPTVLQVDRYFISSGGSGAVLAVLAWYCASFPGSQIILL-VVPVQTGVAGALYLGSTLYQVVTNGAEVPFLGGPTQEIWRTLGAAAAGI 1044
            TKM L+    G R    +  RGGG          S   +V+GI+G NVA  G   + ++  +     P L     N+ +S    L +GR++TLFTS FSH    +      ++Y   P  I  +G  +FLALY   G    +   +   I  +   P V          G SG++  + A+  A+ P  +++L  VVPV    A A   G +L+++V+   EV + G  T +    LG  AAG+
Sbjct:   31 TKMLLRTGRSGGRGSYGYTGRGGGGGKRAPWDRLSTKQIVYGIIGANVAVCGVWQIAWMKYSNFNEAPMLVWMRKNWALS-LGNLKEGRIWTLFTSTFSHEAPLHLLFNMVIVYQFAPQIISSIGNARFLALYAFAGVAGNVASALTRTIWPKA--PGV----------GASGSMFGLTAFTAAAMPSLELLLFFVVPVNARYALA---GWSLFELVS---EVYWQGNRTIDGAAHLGGIAAGL 255
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1048.469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JLS0_9PHAE1.330e-13170.00Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
D8LNG3_ECTSI4.400e-11981.00Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
U5GZS6_USTV13.530e-1133.33Rhomboid domain-containing protein n=3 Tax=Microbo... [more]
A0A238FJB9_9BASI6.880e-1132.28BQ2448_4945 protein n=1 Tax=Microbotryum intermedi... [more]
A0A2H0WF75_9PROT1.380e-930.17Rhomboid domain-containing protein n=1 Tax=Bdellov... [more]
A0A1F3SGD3_9PROT4.380e-934.81Rhomboid domain-containing protein n=1 Tax=Bdellov... [more]
UPI00199EF9F02.640e-828.82Rhomboid family intramembrane serine protease n=1 ... [more]
A0A8J1YNB6_9TREE3.870e-635.04Rhomboid domain-containing protein n=1 Tax=Tremell... [more]
A0A5C5FS69_9BASI3.930e-628.57Rhomboid domain-containing protein n=1 Tax=Rhodoto... [more]
A0A0F7SKV6_PHARH4.540e-629.51Integral membrane protease of the rhomboid family ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1048contigL-elsbetiae_contig1048:10068..20791 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score76.3
Seed ortholog evalue3.1e-11
Seed eggNOG ortholog109760.SPPG_03485T0
KEGG koko:K09650
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.rhomboid-domain-containing protein
EggNOG OGs3A5ZS@33154,3Q6XA@4751,COG0705@1,KOG2980@2759
EC3.4.21.105
COG Functional cat.T
Best tax levelFungi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03029
Ec32 ortholog descriptionPeptidase S54, rhomboid domain
Ec32 orthologEc-04_003970.1
Exons7
Model size1169
Cds size999
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815271.6881447-UTR-L-elsbetiae_contig1048:10067..101781622815271.6881447-UTR-L-elsbetiae_contig1048:10067..10178Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1048 10068..10178 +
1691682808.9706597-UTR-L-elsbetiae_contig1048:10067..101781691682808.9706597-UTR-L-elsbetiae_contig1048:10067..10178Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1048 10068..10178 +
1622815271.7710772-UTR-L-elsbetiae_contig1048:20732..207911622815271.7710772-UTR-L-elsbetiae_contig1048:20732..20791Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1048 20733..20791 +
1691682809.0535429-UTR-L-elsbetiae_contig1048:20732..207911691682809.0535429-UTR-L-elsbetiae_contig1048:20732..20791Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1048 20733..20791 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815271.6978111-CDS-L-elsbetiae_contig1048:10178..105351622815271.6978111-CDS-L-elsbetiae_contig1048:10178..10535Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1048 10179..10535 +
1691682808.9835942-CDS-L-elsbetiae_contig1048:10178..105351691682808.9835942-CDS-L-elsbetiae_contig1048:10178..10535Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1048 10179..10535 +
1622815271.7088473-CDS-L-elsbetiae_contig1048:15522..155911622815271.7088473-CDS-L-elsbetiae_contig1048:15522..15591Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1048 15523..15591 +
1691682808.9955294-CDS-L-elsbetiae_contig1048:15522..155911691682808.9955294-CDS-L-elsbetiae_contig1048:15522..15591Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1048 15523..15591 +
1622815271.7229066-CDS-L-elsbetiae_contig1048:16555..166351622815271.7229066-CDS-L-elsbetiae_contig1048:16555..16635Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1048 16556..16635 +
1691682809.0034683-CDS-L-elsbetiae_contig1048:16555..166351691682809.0034683-CDS-L-elsbetiae_contig1048:16555..16635Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1048 16556..16635 +
1622815271.7315812-CDS-L-elsbetiae_contig1048:17357..174791622815271.7315812-CDS-L-elsbetiae_contig1048:17357..17479Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1048 17358..17479 +
1691682809.0113509-CDS-L-elsbetiae_contig1048:17357..174791691682809.0113509-CDS-L-elsbetiae_contig1048:17357..17479Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1048 17358..17479 +
1622815271.7405496-CDS-L-elsbetiae_contig1048:18239..182981622815271.7405496-CDS-L-elsbetiae_contig1048:18239..18298Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1048 18240..18298 +
1691682809.0192394-CDS-L-elsbetiae_contig1048:18239..182981691682809.0192394-CDS-L-elsbetiae_contig1048:18239..18298Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1048 18240..18298 +
1622815271.7496412-CDS-L-elsbetiae_contig1048:19225..193081622815271.7496412-CDS-L-elsbetiae_contig1048:19225..19308Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1048 19226..19308 +
1691682809.0286822-CDS-L-elsbetiae_contig1048:19225..193081691682809.0286822-CDS-L-elsbetiae_contig1048:19225..19308Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1048 19226..19308 +
1622815271.7612417-CDS-L-elsbetiae_contig1048:20503..207321622815271.7612417-CDS-L-elsbetiae_contig1048:20503..20732Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1048 20504..20732 +
1691682809.0396216-CDS-L-elsbetiae_contig1048:20503..207321691682809.0396216-CDS-L-elsbetiae_contig1048:20503..20732Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1048 20504..20732 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1048.469.1prot_L-elsbetiae_contig1048.469.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1048 10179..20732 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1048.469.1

>prot_L-elsbetiae_contig1048.469.1 ID=prot_L-elsbetiae_contig1048.469.1|Name=mRNA_L-elsbetiae_contig1048.469.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=333bp
MLAIRLARASSRQVKGLSLAVPAGPGASAGAASAAASGRSLTRCPMWPLR
KSSSNLACSTWARSAASGNRMAGLSGPRSGQLGGLRATKMELQGNRTLSS
FLPRGGGFSDSLVVHGIVGLNVAGTLALFLHETQGTGGPFLFSNFMVSTY
TTLTQGRLYTLFTSNFSHSHLWNGAIFSYMMYTLGPTAIQQLGRRQFLAL
YLLGGAFSQLCQVVGPEIARRLSLPTVLQVDRYFISSGGSGAVLAVLAWY
CASFPGSQIILLVVPVQTGVAGALYLGSTLYQVVTNGAEVPFLGGPTQEI
WRTLGAAAAGIAVAAASRGRGGGGRYKFIQRH*
back to top

mRNA from alignment at L-elsbetiae_contig1048:10068..20791+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1048.469.1 ID=mRNA_L-elsbetiae_contig1048.469.1|Name=mRNA_L-elsbetiae_contig1048.469.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10724bp|location=Sequence derived from alignment at L-elsbetiae_contig1048:10068..20791+ (Laminarionema elsbetiae ELsaHSoW15)
CTTTGCCGCTCGGCTCTTAGAGAGTGACACCCACGCGCGTTCTTACCTTC
CACTGTGCACGGGCCGGGGGCAAACAAGCAAGCAGGTCCATACACACAGC
AGGGAAGACAGATGTTGGCTATCAGACTTGCGCGGGCTTCGAGCCGCCAG
GTAAAGGGCCTGTCGCTAGCAGTTCCTGCTGGACCCGGCGCATCAGCGGG
AGCCGCATCAGCAGCAGCAAGTGGGCGCTCTCTCACTCGATGCCCGATGT
GGCCCCTACGGAAGAGCAGCAGCAATCTTGCGTGCAGCACGTGGGCACGC
TCTGCTGCGTCAGGCAATCGGATGGCGGGACTGTCAGGACCTAGATCGGG
GCAACTGGGCGGTTTGCGGGCGACCAAGATGGAGCTGCAGGGCAATCGGA
CTCTGTCGTCGTTTCTCCCTAGAGGAGGAGGCTTCTCGGATTCCCTGGTC
GTCCACGGGATAGTTGGGGTAGGTGCATTTGTGCATTTGGAGATACAACT
GCCAATTCCTAACCCTTTTAGATCGTACGGAGTACGGAAGGTCCCTGAGA
ACCAAAGTTATCAGACCAAAACTATCGAACTGTTCTAGATGCCCGCTGAT
TGGTCGGGAAGGACAGTCCCTGCGCAAGTCACCTGCAAAGATGAGCTGCA
GGGCTCCACGCCAATTTGGCGACACTTTCTTATACTAAATAGCAGTCAAA
CTCTGTTAAACGTTTGGCGACACTTTCGTATTCAAACCAAGTCGAACTTT
TTTGGCGTACCAGACAATACGGAGTTCTTTGTCTCAGAGGCATGAGATGA
ACCCTGGGCTGTCCACGTGCAGCAGCCCTCACAACGCATCATGCAGCGTG
GCGAGCGAAGCAACCCGCTCTAGGCTCAACATGCGGTGGTTCTCGAGAGT
TACAGCGAAGCTGTGTGTGCGTGCCTGTCATCTCAAAGGCTCAGATCGCT
GGGGGCGCCGCGGAAAATACAGAATTTAGAATCGCAGACACGTTGATTTT
TTTGTGATTTTGAGATATCGACGACAACTCCGTTGTGTTCGCAGCACTGT
TGTGGAGCTGTGAGGAGGCCAGATACGGTACGTGAAGTGTCTATACAACT
CGGCAGGGTACTCCCAGGCCTTTGTACGGGATACCAAGACCGCCCGTGCA
CCCCAAAGTCATAAAACAGTGACCAAAGTTAGGTGTCGCCAAATCGTCGC
CAAACGGGCTTCCAGTACTAAAAGGGTTAACCCTTTTAGTTCCACGATCA
CGTGGCCAAGGGGAAAAGGCCAAACTCTGGAAAAGGCGAAGAGGCATGTT
GTGTTTTGTGGTCCGCACCCGGCAAAAGCTGACGTAGTCAGCAGCTTGTC
TGCAGAACTCCAAAAAAATAAAAAAATGACTGTTTTATAGTGGCGCAACT
GTTTTTTTGGCCTCTTTTGGCTTTTACACTACGCGCCATCGCAATTTAAA
ATGAAGCACATTCTCCTTGGCCGGTAGGTTAACATATCAATCGAAAGCTA
AGGACAACAGCTACCATCGCGTAGCCTTCGTTCATTTAGCGGTGCTGTAG
AGCCTTTCCTGCCCTCCGTTCTTCGTATAAAATCTGAATCGACCGCTGTA
AAGCTCTCGATATGGCAAACGTCACTGCCATTTTATAACGGAGCTACCAC
CGCTGCTGAGGACGCCAGAGATTGCTCTAAGGTACTATTCGTGTACACCT
GTGTCTCCTCGTAGCCTCTGGTTGGGTGCGTGCGGTAGTCTCGGTGTGCA
CCGCCATAGGCTGAGGTCGGAGTTAGGCCGCATTTTTACAGCCGTCCCAA
AACCCCCGATAACGCTCTTTTGTCACGCCGCCACTCAAGGCACAAGGAGA
TGTTTGAAGCCTGTCCCCCGGCTATGTTACTCTTTCGGGATGCCCTTCGA
CATTTCTCTTAGCCTACCGGCCAAGGAGATGGTGCCTCATTTTTTGAAAA
TCGTTGGGCATTTCGACAACGTTAGGTTACTAAAATCAAGATAAAAAAAT
CGATCCAGATTGTACAGCAAAGCGGGGATGGAACGGAATAGTGGCGGAGG
CCAGCCTTTAAGGCTGGACACGATCACGTGGCTAAGAGAAAAGGCCGAAA
CCCAGAAAAGGCGAAGAGGCATGCTGTGTTTTGTGGTCCGCACCCGGCAA
AAACTGGCGTGGTTAGCAGCTGGTCGATAAAACTCCAAAAAAATGACGGT
TTTATAGCAGCGCAACTGCTTTTTGGTATGTTCTCGCTATTTCACTAAGG
GCCATCCCAATTTAAAATGAAGCATATTCTCCTTGGCCAGGAGGTAAATA
TATGCATCGAAAGCTAAGGACAACAGCTACCTTCGCGTAGCGTTTGTTTC
CTTAGCGGTGCTGTAGGGCCTTTGCGTTCCTCCGTTCTTCGTAGAAAATC
TAAATCTACCGCTGTAAAGCTCTTGACACGGCAAACGTCACTGCCATTTA
AAAACGGGGCTGCCGCCGCTGCTGAGGACGCCAGAGGTTGCCCTAAGATA
CTATTCGAGTACACCTGTGTCTCCTCGTAGCCTCTGGTTGAGTGCGGTAG
TCTCAGTGTGCACCGCCATAGGCTAAGGTCGGAGTTAGGCCGCATTTTTA
CAACAGTCCGAAACGAGAAACGAGCCAAAAAGGCTATTTTGGCTCAGCGC
CACTCAAGGCACAAGGGTCCGTTTGAAGCCTGCCCCCCGGCTATGTTACT
CTTTCGGGATGCCCTTCGGCGTACCTGCTTAAAGCTCCCGGTCAAGGAGA
TGGTACACTATTCTTTGAAAATTATCGGGCATTTCGACAACGTTAGGTTA
CTAAAATCAAGATAAAAAATTGATGCAGATTGTACAGTAAAGCAAGGGAC
GCTACCGGGCCACTGGCGGAGGCGGGCCTTAATGTAAATTCTATGCATAG
TATGTACAAATATCAGCAGTCTAGATAGATGGGTAAGTCTACGTCCAGTC
TGTGAAAAAGTTGTTCCAGGGGGACTGTTGTAGGCATACTAACGCCCTTT
TTTTCCCGTCCAAGATATACTCGCACACAATCCGTAATGCGTATATATTT
CCAGTCACTCAACCTTCCATCTCTCTCTTTCGTACACACTAGACTTGTGG
ACATAAATATATTAATACTTGGGGCTCTCGCTCTGGGCGCTCGAGATCCT
TTTTTTTTTCAATTTCTTCGCCGGTAGGCCTCGTCTCGCCGTGAGTTTTG
GACCTAGTGGTAGCCCGCGGCTGCAAGAATTGTTTCCGCACGCTACTCGC
TCTTGGCCCTGGGCGTGGCGTCCGTGGCAGAGCGTTGCAAAAGCTGATCT
CCGTGATCTACTATTGTAGCGATTGTCCAATAACAGCCCTGTTTATTAAA
TCTGACAGTCCTGCTTTACCGACGGTCGGTGCTCGTTTTGAAATTTGAAA
TTTTGATATAACAGCATTGTTTTCCGCGAGCAAGCTAGAGTGATGAATTG
ACTGCGGTCGCGAAGCAACTCCACGAACATGGACCGCACTCCGCGCGAGT
ATAGCAATCTGCCCGCATAAAACGTATCTTCGCAAATGTCTGCCGGCGCC
ATAGTGAGTGTAGCTCGCTGAGTCCCTCTCGCAGCTGTTGGCGTCAAATC
TTTTCAAGCCTATCATTTCAGAATCTCTGGGGTGGTTGTTAGCTCGCAGC
TGTTGGCGTCAAATCGTGTCAAGCCTATCATTTCAGAACCCCTGGGGCGA
ATAGCTCGCTGCAGTCCCTCTCGCAGCTGTTGGCGTCAAATCATGTCAAG
CCTATAATTTCACAACCCCTGGGGTGATGCTACAGCAGTACCCATCAAAA
AGTGCCATGTGGATCATACCTGCTTTGTGTGTGTTTTTTCAGATGAAAAA
AGAACGGTTCTGTGGCTACTACGAGTACCATACATCGTACATGCGTACAC
GAGTGTGAAAATTTCGCCGTTACTGTAGATGGAAATTGCGAGGTGTGTTA
AAATTTCCAGCGCATATATGTACGCGGGTAGCAGGTTATTATGTCGTATC
CTACCGCATACAGAGCGCGAATTCTACCGCTTTAACTGCCGTACTTGGAA
CATGGCTAAACGCCTGGAGCAAATAAATGCACGTTGCTCTCACAATAATA
CCCGGACATAAGTTCCTCCTACAAGTAGTCACCTGAAAATTGCACACTTG
ACCTTGTCCTTCAGCATTCGAGCGAAGCTGAGGCCCGCGTCAGCGGGCCG
CCGCGAAGCGCCCTTGTATGTATGTACATTTTTGCAGTGTGATGAAACGA
TGATGCCACAGCATGCAGTAACTGAAGCTGCCGAGGGTTTCTTACGTCAC
CGAGTCAACTTGAACCCCTTCACCGTGGAATGCACACGCTGCATCGGCAC
CTGTAACCGGTCTTTGTGTAGATTCATCACTACCTTTGAACTAGTCGGCT
CTGGGTCGCCCTTGATTTCGCCGGGGCACTGGCTACTGTTGTCTACCGTT
CATCGATGCAGCTCACAGTCGTGTGTATTTTTCTCCACGTCGTTGTAAGG
TCCACTTCGTTGCTGCTTTGAACAAGCTTGCCTACACTGCGCAGCAGCAT
GCCTGCGTGCTTGGTCAAAGTGTGGCCGTAACCACGAACACTGCCTGCTT
TGGCACCGACTGCCGTAAAACGCTTTGAGTTACCCCCGGGTATTTGTTTT
TTGCTGAAGTAGAGGTACCCCAGGTATAACTCTCAAGAAAGGGGAGTTTT
TTTGTTGTTGTTGCATACAGGCACATACCCCGGGGAGAGATCCCCCCGGC
GGAAAGCAAACATATCTGGCCACACGCAACCACTCCACACAAAACCGCGA
TGGGGCTAACCAGCATCTACGAGCAACAGTTCAAGGAGAAGAGGGAGGAG
GAGGAGGAGGAGGAAGAGAAGCATGAAGTGCTTGGTCCCAATTGGCTTAT
TTTGATGCGCTGTGATGCCAAAGCATGTGCAAGAAATGATCAAGAAATGA
TTGGGAAACAAATGCCCCGGGGGGGGAACTCAGGAAAAAATTCCAACCCA
GGGGGGAACTCAAGAAAGGGGAGGGGACTTTTTTTTTACCTCGAAAATAT
ACAAGACCCCGGGGGTAACTAAACTAATGCTCTTTGGCCGAAAAGGTGGT
GGGGGGTAGGGGAACTCGCTGTGGGGGCAGGAACCCAAAGCGTTTTACGG
TATTTACGCATCTTCGAAAAATTGAAAAAAATGCAGCAGTTCTAGGCACA
CCACACTCCTCTGCTCCGAATAAAGACGTCTGCAGGTAACCAACGCATGT
TCGGATACGCCGAAAGCTGGAGCGAAATTGCTACCGCTGCATACACGCGC
ACGCTCTCGACCGCGCCGTATGTCTTTTGAAATGCGCCGTCTCTCTCCAC
TGTAGGTACAATACGTGTTTCTCTTTTTTCCGTGACCCCCTCCTCCCTTG
TGTCCTTTCTCTCCGTACAAACACGTACCCCCCCCGGCGCTTGCACTCGG
TACAGCTGAACGTTGCCGGAACGCTGGCGCTTTTTCTCCACGAGACCCAG
GGAACCGGCGGCCCGTTCCTTTTTGTGAGCCCGTGTAAAACAGAGTGCCG
AAGTGTGCAGTTGGGGGGGGAGGGGGGGGCGTTTGCACTCAATTAAAGCG
GTGTGCGGCCGTGAATCTGATCCAGGCAGAGAGAGCCCTGGCCCGTACAT
AACATGCACACAAAAAAAAAATGCGTATGTACGTCTATGGGCAAGATCGG
CTGGCTGGAAGAGCAATGATCTTGCGCGTGCAGACGCCGGTTCGGTTCGC
GCTACACACGGCCGGCTTCCGCATTCTTTTTAAATGGTATGGGCCTTGAT
ATGTGTGTCACCCGGGAAGGATGGAGGGGCGAAGACTTTGCGTCGTGCTT
TGTCTTGCAGGGCCCAGCGCGCGGGTTTTCACGATGGGCCGGCCCGACGG
CCGCACGCACGGCTGGTTTTGTCCGGAGGCGTCTTCAGATGTTTTCATGC
TTTGCCGGCCTCTTTGGTCGGTCGCGTGCTTTTGTTTTTCGGCGGCGGTG
GCTGCGGCGGGCTTGGGCGTGATGTCGATCGCGCTGCACTTGGACGTGTA
TTTCGTTCCTGTTCTCGAGGGCGGGCGAGGGCCGGAAAAGGCCTTTGCTC
TAGTATGGGTTAGGTTCCATCTTTGATTCTTTGTTTTATTTTAAAAGGCC
GTCGCGTCTCATACATACGCACGTTGCGTCTAGGCTTGTACCCGGGTAAT
CTTCTACCCGACGCCACAACCCGCCCCGCCGCCCTCCCCTTGACTGCTGT
GGCATTGCCCATTAGTACGGTGGCAGCAGCAACATGGGACTTACAGCAGC
GCCAGACAGCAGCGTTTCTAGCAATGGTGTTTTTCCGCCGAGTAGGCATT
CGCGCAACCCCGCTTCTACCCCCACAGATGGTCCACTTGGTGCGTTCGCC
CTGTGCTTTGTCCGCTCTCGGCAGTGCAAAGAGCGACGTTCCTTTTGTTG
CCCCCTTCTGCACCCCCCCCCCCCCTACCTGCCGGCAGAGTAACTTTATG
GTGTCCACCTACACCACACTGACGCAGGGGAGGCTGTACACCCTGTTCAC
GTCGAATTTCAGCCACAGGTTTGTCCCAAGAAAGTGCCGTTTTGCTATTG
TGTGTCAACCCAGAGTAGGCGAGACAGGCCGAAACGCGTGTTGTAAGCGT
TTCGCAACGACCGTTGCGTTTGTCGCGAAAACCCGTATCGTCACGTCTCT
TTTTTGTATGTACGCATGCAGCGTTGGTGCAGGTTTGTAAGTCCCGGTGG
GGTGTCTTAAAGCGGCTCGTCGAAAGACAAAGACTTATTCGCAGACTGTT
TCCAGGCTCGAGGTTTGTCAGCTCGAGGACGTGTTTTATTGGTACTGCTT
TCGCGGATGTAGACCGCACCGTCTGTCAAATAACAAAGTCGGTATTTTTG
AAACGAGAAAAAGGGTCTTGTTGTGTATCGATAGGCCGGAAATGTGCAGG
CCGTAGAACTTGGGAGCCTCGTGAGGAGGGGGGAAGGGGGGAGAGACAGA
GCGGACGGAGTACCCAGCCTCGGGATTCACGCATTCGAAGAAAGAAAGTG
CCGAAGTTGCGGTGTGTGTGCGCATGCGTGCGTGCGTGTGCGCGGGTGGA
TGTGCTTGTACTCAGGATACTCCTTTTGCGTGTTTTATCCTCCTACCGAA
GAAGGTCTAGTCCTTTGCAGCCCTTGCGCACCCTTAGGATATTGTGTGCG
CCCCTTTCCCACCCCATCCCATCCGCGATGGTGCTGAACCCCCCGCCCCT
CCACCCGGTCCTCGCATTCAACCTCGTTCTCCATGAACAGTCACTTGTGG
AACGGGGCCATTTTCAGCTACATGATGTACACTCTTGGGCCGACGGCCAT
CCAGCAACTAGGCAGGCGGCAGTTCCTCGCGCTCTACCTGCTGGGCGGGG
CTTTTTCTCAGCGTAAGATCGCAACGCGATTCTGTTTTTTGAGGCCGCTT
TCTCTCCTATCGTTCACCCAAATAGTCTTCTTTCTACAAATAGATGAGCT
GTTTGGCGGCGGCGGGGGAGGGGTTGTTTTTTTTCTCAGCGTGAATGATG
AAAGATTGCACCGCATTTTGTTTGTATGTATGAGGCCGCACGCGCTGGCT
CTATTTAAGTCTACATTTTGGCCTTTCCTTCTTCTGAGGATTAGTTTTCG
GCGACTCGGGTTTTGCTTGCGGGGGCGTGAAGGGCCTGTTGAGCTACTAG
TGCCTGGGTGTATGTACCCAACATGTTTGTCTCTGCGTTGTCTGAGAGCT
CGGCATATTTCGCGGTGTCGTCTGCTGCGAGCACTCACAGATTTGGCTAC
GGGCCGGGCCGGCCGTCTTTTCCGACAAAGCTATGTAGAACGTCTATACG
TACGCACGTGCTGAACCCTCCTGTCCTATTTCGGAGGCTTCGTTCCTGAG
CTTTTTGTCTGGTGCCGTTCGCTCTCTCTCGCTCTGCCGCCGTATATACA
TAAATCCGACGTTCGTCGTGCGTCGGCTGGTGACCGATCGATTTCTCGGA
AGAATACCTACGCTCCCATGTTTTCTAACACTTCGCTGCCTCCTGTTCCT
CCTGCTGTGTTTTCGGCGGCTCCGCCCCTCTGTTGGGGTTCTACCTCGCC
TGTGTCTGCATATGCGTGTTCCCTTGCGGTTGTGCCATGCCGGGGGTGCA
TGTTTTGCCGTCTCGGCAAAAGTGTGCCAGGTGGTGGGGCCGGAAATCGC
TCGCCGGCTGAGCCTCCCGACCGTTCTTCAGGTATGGTGCCACATGCGAT
TGCTTGGGCTTGCCGCGTGAAAAAAGTCACTTTTCCTAGCTCCGGGTGCG
CGTCCGGCAACGTATCCCCAGCCCGCACCCGGGGACTGAAACAAAGCAGC
ACATATACCGTCGTTATCTACGTCGTGCTCGCTCTTTTTCCCCCTGGACA
CGGAAAGGAGCTGGTGGGTGCGCGCGCACGCACACCTCGCCCCCGTGAGC
TGTTGGCGCCGGATGTTCTCTTAGCTCGTCTTGTGTCGACGAGAGTTGAG
CGTACATCATCCTCGTTTTTTTGGTTCTGAAGTTTTTTTTTTTTCACGTT
TTGGTGGGGGCGGGCGCTCCAAGCGGTTTTTGCTGAAGCCACGGCCCTAA
ATGTGGTGCCATACACACGTTGTCATACATACTCATCTGGTTGTGACGGG
TTCGCGGGCACATGCATATACGGCGATTGCAAAAATAACACCGGGCGAAG
AGGGTGCGTTTCGTGGCGGGGTGGGGCGGACGTTGTAGTCTTCGGTCTCT
GGTCTTTTGGCGGGCTGAACCAGGAAGATTTGGAGCGGTGGACACATACA
TTCGTGCACTCTACACGCGCATGGCCGCGGGTATATCTATAGCAACAAGG
GAAGGTGCTGTTGAAGCTCAAGATGTTTTGTAGGCTTCTTGGTTCGGGCC
GGTTCGGCCGCACTCCGCGAGGGGGGCAACGCTCTTTCCCTCGTCCTCTT
TTCCCGCTGTTTTTCCAAATGCTCTCTCTCTCTGTTTTTCCCCCCTTCTT
TCCTTCCTTTCACCCACCCCCTTTGTATGTCTGTCTCCCACACATACACC
GCCCGCCCTAACCCTCTGTCGCCGTATCTCTCTCTCTCTCTCTCTCTCTC
TCTCCCCCCCCCCTCGTCTGCACACGCTGCTTGCTCTCTTGGTGCTGGTG
TGTGACAGGTCGACCGGTATTTCATTAGTTCTGGAGGGTCCGGAGCGGTT
CTTGCCGTTCTGGCATGGTACTGCGCGAGCTTCCCGGGCAGGTGAGCCGT
GCCTGCTTCTTCTTCGAGACGCCCGAGTGCTGCGAGCTTGTAGCGTTGTT
GTTGTTGTTGTTTCTTCACATTAAAAACCGTTCCGTTCTCTCCACCCGAT
CTCTCCACCCAGCACCTACCTCCCTATGGGCATACTATTCCAACAATTGG
TTCCGTCAATTCCGCATAATAAATACATTAATATTTTATCGAGGGGATTC
GAACCACCAAGTCGCGAGAGGGTTGATCGTAACTGAGTGCGAACAGCCCG
CTTGTCGGTGCCCTCTCGTGCGCAGCAGTGGGTGAAAAGCGCAATGCTGC
GCGCGGGGGCTTGCGCGCTCGGTCGTTGTGGGGTGTCTATTCAGCGTTCG
TCCACTCCAGGGCGGCCCGTGCCGTGAGTTGTTTGCAGCCAAGAACGTTG
ATGCAATGAGTTAGTTACAGAAAAGCACACGCTACGTACCGCATATAGCG
CTTTCGCGATCCCGGCGGTGAGTATCCCTGCTTTGTTTTTTTATGTACAT
GCATAGGTATACCAGTCCCAGCAAAGCCCGCCGGCCTTCGCGACACGCCC
CCTGAAACCCCCAGCGATACGTGTGGGGATTCGCCATCCCAGTTAGCCTT
CATTAGGTGTCGTGGCTTTGGGCTCAGCCAATGGTGTGCGCTGTAGGAAC
CCACGTCCAAACGCGCATCAAGGCCCTCTTGCGCGTAGCTGGTGGTGGCT
TGCACCACTCTCTGTGACCGCTAAACCGTGTGGTTGAGAAGCATCTTTAA
TTTCGGTCAAGAGTAGTAGGTAGTTGAGAATTGATGTGGCTCGGCCGCGC
ACATCAATTCTCATCAACACAAGCATTTCGTTCCCGCACTCCATCCACCA
TTTACCACAGAGTCAGTCCGTCAACAGCAGCAGTGAATAAAACGGGGACG
TTTTTTCGCAGCACTCACTTAATGTTACCTCGCTACACAACACAGCAGCT
ACGGGCATGTCCACAACGCGATCCCTGCAGAGATGTCCTCCGGGTCATGT
ACGATAGATAGTCAGTCCATTGCATGAAATTTCGAAATTTCGTGACAAAC
AAGCGCCTGACCTGCTGGTACAGCAGCGGCGGCGTGCATTTTTTGTCGAC
ATGAAATATACCTCCAATTCTACTCTCCTACTGCGGGGGGCCCCTTTCCG
CCTCCCTCCCGATCCACTGCACCGCCCCTCGATCAGCCAAATCATCCTGC
TGGTGGTGCCTGTCCAGACCGGCGTTGCCGGAGCCCTCTACCTCGGCTCT
ACACTGTACCAGGTGGTGACAAACGGGGCAGAGGTGCCGTTCCTTGGCGG
GCCGACGCAGGAGATCTGGCGCACTCTGGGGGCGGCCGCGGCGGGCATCG
CGGTGGCAGCCGCGTCCCGAGGCCGGGGTGGCGGCGGGCGGTACAAGTTC
ATCCAGAGACATTGATCTTCCCTTTGTTATTTTCCTTCGTGCTTTTTTTT
TTATTGTTCGTTAATCGTTGTTTT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1048:10068..20791+

>mRNA_L-elsbetiae_contig1048.469.1 ID=mRNA_L-elsbetiae_contig1048.469.1|Name=mRNA_L-elsbetiae_contig1048.469.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1998bp|location=Sequence derived from alignment at L-elsbetiae_contig1048:10068..20791+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTTGGCTATCAGACTTGCGCGGGCTTCGAGCCGCCAGGTAAAGGGCCT
GTCGCTAGCAGTTCCTGCTGGACCCGGCGCATCAGCGGGAGCCGCATCAG
CAGCAGCAAGTGGGCGCTCTCTCACTCGATGCCCGATGTGGCCCCTACGG
AAGAGCAGCAGCAATCTTGCGTGCAGCACGTGGGCACGCTCTGCTGCGTC
AGGCAATCGGATGGCGGGACTGTCAGGACCTAGATCGGGGCAACTGGGCG
GTTTGCGGGCGACCAAGATGGAGCTGCAGGGCAATCGGACTCTGTCGTCG
TTTCTCCCTAGAGGAGGAGGCTTCTCGGATTCCCTGGTCGTCCACGGGAT
AGTTGGGATGTTGGCTATCAGACTTGCGCGGGCTTCGAGCCGCCAGGTAA
AGGGCCTGTCGCTAGCAGTTCCTGCTGGACCCGGCGCATCAGCGGGAGCC
GCATCAGCAGCAGCAAGTGGGCGCTCTCTCACTCGATGCCCGATGTGGCC
CCTACGGAAGAGCAGCAGCAATCTTGCGTGCAGCACGTGGGCACGCTCTG
CTGCGTCAGGCAATCGGATGGCGGGACTGTCAGGACCTAGATCGGGGCAA
CTGGGCGGTTTGCGGGCGACCAAGATGGAGCTGCAGGGCAATCGGACTCT
GTCGTCGTTTCTCCCTAGAGGAGGAGGCTTCTCGGATTCCCTGGTCGTCC
ACGGGATAGTTGGGCTGAACGTTGCCGGAACGCTGGCGCTTTTTCTCCAC
GAGACCCAGGGAACCGGCGGCCCGTTCCTTTTTCTGAACGTTGCCGGAAC
GCTGGCGCTTTTTCTCCACGAGACCCAGGGAACCGGCGGCCCGTTCCTTT
TTAGTAACTTTATGGTGTCCACCTACACCACACTGACGCAGGGGAGGCTG
TACACCCTGTTCACGTCGAATTTCAGCCACAGAGTAACTTTATGGTGTCC
ACCTACACCACACTGACGCAGGGGAGGCTGTACACCCTGTTCACGTCGAA
TTTCAGCCACAGTCACTTGTGGAACGGGGCCATTTTCAGCTACATGATGT
ACACTCTTGGGCCGACGGCCATCCAGCAACTAGGCAGGCGGCAGTTCCTC
GCGCTCTACCTGCTGGGCGGGGCTTTTTCTCAGCTCACTTGTGGAACGGG
GCCATTTTCAGCTACATGATGTACACTCTTGGGCCGACGGCCATCCAGCA
ACTAGGCAGGCGGCAGTTCCTCGCGCTCTACCTGCTGGGCGGGGCTTTTT
CTCAGCTGTGCCAGGTGGTGGGGCCGGAAATCGCTCGCCGGCTGAGCCTC
CCGACCGTTCTTCAGTGTGCCAGGTGGTGGGGCCGGAAATCGCTCGCCGG
CTGAGCCTCCCGACCGTTCTTCAGGTCGACCGGTATTTCATTAGTTCTGG
AGGGTCCGGAGCGGTTCTTGCCGTTCTGGCATGGTACTGCGCGAGCTTCC
CGGGCAGGTCGACCGGTATTTCATTAGTTCTGGAGGGTCCGGAGCGGTTC
TTGCCGTTCTGGCATGGTACTGCGCGAGCTTCCCGGGCAGCCAAATCATC
CTGCTGGTGGTGCCTGTCCAGACCGGCGTTGCCGGAGCCCTCTACCTCGG
CTCTACACTGTACCAGGTGGTGACAAACGGGGCAGAGGTGCCGTTCCTTG
GCGGGCCGACGCAGGAGATCTGGCGCACTCTGGGGGCGGCCGCGGCGGGC
ATCGCGGTGGCAGCCGCGTCCCGAGGCCGGGGTGGCGGCGGGCGGTACAA
GTTCATCCAGAGACATTGACCAAATCATCCTGCTGGTGGTGCCTGTCCAG
ACCGGCGTTGCCGGAGCCCTCTACCTCGGCTCTACACTGTACCAGGTGGT
GACAAACGGGGCAGAGGTGCCGTTCCTTGGCGGGCCGACGCAGGAGATCT
GGCGCACTCTGGGGGCGGCCGCGGCGGGCATCGCGGTGGCAGCCGCGTCC
CGAGGCCGGGGTGGCGGCGGGCGGTACAAGTTCATCCAGAGACATTGA
back to top