mRNA_L-elsbetiae_contig10463.456.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10463.456.1
Unique NamemRNA_L-elsbetiae_contig10463.456.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig10463.456.1 vs. uniprot
Match: D7G6C4_ECTSI (Eukaryotic elongation factor-1 B gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6C4_ECTSI)

HSP 1 Score: 778 bits (2010), Expect = 2.790e-283
Identity = 402/425 (94.59%), Postives = 408/425 (96.00%), Query Frame = 1 
Query:    1 MALKLWTNPANFRAFKVLIAAEYNGVELEVPEFNHPSDSKSPDFLAKSPLGRVPVLETPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKTALGALEKALLERTYLVGDKITLADITVASALVYPMKLVMSPEYRKAFPCVTRWFTTCVNQPQFKAVIGTVELAKEEMTAEGAPAAPKKEXXXXXXXXXXXXXXXXXXXXDDGSRDLGMPAPEKKAPHPLAVMDKEAKSPFAGDTWKKARRDIYSNNSYEDSMKQFWDIFDPEGWSLWICRYKFNAENTRLFMTSNLVGGFVQRSGEIRKWAFGCMQITGEEGKELLVSGAWLIRGQSIQPMVDANDDANWYDWTKVATPVSDEDKALVTEMWCSETTVEGRPVLDGKVFK 1275
            MALKLWTNPANFRAFKVLIAAEYNGVELEVPEFNHPSDSKSPDFLAKSPLGRVPVLETPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLK ALGALEKALL RTYLVGDKITLADITVASALVYPMKLV+SPEYRKAFPCVTRWFTTCVNQPQFKAVIGTVELAKEEMTAEGAP APK  XXXXXXXXXXXXXXXXX   DDGSRDLGMPA EKKAPHPLAVMDKEAKSPF GDTWKK    IYSNNSYE+SMKQFW+IFD EGWSLWICRYK+NAENTRLFMTSNLVGGF+QRSGEIRKWAFGCMQITGEEGKEL+VSGAWLIRGQSIQPMVDANDDANWYDW KVATPVSD DKALVTEMWCSETTVEGRPVLDGKVFK
Sbjct:    1 MALKLWTNPANFRAFKVLIAAEYNGVELEVPEFNHPSDSKSPDFLAKSPLGRVPVLETPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKIALGALEKALLHRTYLVGDKITLADITVASALVYPMKLVVSPEYRKAFPCVTRWFTTCVNQPQFKAVIGTVELAKEEMTAEGAPKAPKXXXXXXXXXXXXXXXXXXXEE-DDGSRDLGMPAEEKKAPHPLAVMDKEAKSPFVGDTWKK----IYSNNSYEESMKQFWEIFDAEGWSLWICRYKYNAENTRLFMTSNLVGGFIQRSGEIRKWAFGCMQITGEEGKELIVSGAWLIRGQSIQPMVDANDDANWYDWVKVATPVSDADKALVTEMWCSETTVEGRPVLDGKVFK 420
[Close]
BLAST of mRNA_L-elsbetiae_contig10463.456.1 vs. uniprot
Match: A0A836CFW7_9STRA (Eukaryotic elongation factor-1 B gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFW7_9STRA)

HSP 1 Score: 600 bits (1548), Expect = 8.250e-213
Identity = 319/433 (73.67%), Postives = 352/433 (81.29%), Query Frame = 1 
Query:    1 MALKLWTNPANFRAFKVLIAAEYNGVELEVPEFNHPSDSKSPDFLAKSPLGRVPVLETPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKTALGALEKALLERTYLVGDKITLADITVASALVYPMKLVMSPEYRKAFPCVTRWFTTCVNQPQFKAVIGTVELAKEEMTAEGAPAAPKKEXXXXXXXXXXXXXXXXXXXXDDGSRDLGMPA-------PEKKAPHPLAVMDKEAKSPFAGDTWKKARRDIYSNNS-YEDSMKQFWDIFDPEGWSLWICRYKFNAENTRLFMTSNLVGGFVQRSGEIRKWAFGCMQITGEEGKELLVSGAWLIRGQSIQPMVDANDDANWYDWTKVATPVSDEDKALVTEMWCSETTVEGRPVLDGKVFK 1275
            MALKLWT   NFRAFKVLIAAEYNGV++EVP+F+   D+KSP+FLAKSPLGRVPVLETP GSIFESNAIARYVARMRRDTEL GVSFFES QVDSW+DFCAHE+ELPAT+W YPVIGYMP+N AAV+KAK DL   L  LEK LL++TYLVGDK+TLADI V SALVYP+KLVM  EYRKAFPCV RWFTTCVNQPQF AV+G VE AKEE+T  G  AAP K+ XXXXXXXXXXXXXXXXXXX                  P KK  HP AV+DKE  SPF  D WKK    IYSN S Y D MKQFW++FD EGWSLWICRYK+NAEN + FM SNLV GFVQRSGEIRKWAFG MQITGEEGKEL+VSGAWL+RG ++Q + DANDDANWYDW K+ATPVSD DKAL+ E WCSETT+EGRP++D KVFK
Sbjct:    1 MALKLWTQQGNFRAFKVLIAAEYNGVDIEVPDFSA-VDNKSPEFLAKSPLGRVPVLETPSGSIFESNAIARYVARMRRDTELCGVSFFESGQVDSWVDFCAHELELPATVWVYPVIGYMPHNAAAVAKAKADLARGLETLEKHLLDKTYLVGDKVTLADIVVVSALVYPVKLVMDAEYRKAFPCVMRWFTTCVNQPQFVAVVGKVEPAKEELTPAGVAAAPAKKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVKKEVHPYAVLDKEKPSPFINDAWKK----IYSNTSDYNDCMKQFWELFDAEGWSLWICRYKYNAENKKAFMVSNLVSGFVQRSGEIRKWAFGVMQITGEEGKELIVSGAWLLRGDTVQHLKDANDDANWYDWEKIATPVSDADKALIQEFWCSETTLEGRPIIDCKVFK 428
[Close]
BLAST of mRNA_L-elsbetiae_contig10463.456.1 vs. uniprot
Match: A0A6H5JF10_9PHAE (GST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF10_9PHAE)

HSP 1 Score: 591 bits (1524), Expect = 1.240e-209
Identity = 309/334 (92.51%), Postives = 316/334 (94.61%), Query Frame = 1 
Query:  274 QVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKTALGALEKALLERTYLVGDKITLADITVASALVYPMKLVMSPEYRKAFPCVTRWFTTCVNQPQFKAVIGTVELAKEEMTAEGAPAAPKKEXXXXXXXXXXXXXXXXXXXXDDGSRDLGMPAPEKKAPHPLAVMDKEAKSPFAGDTWKKARRDIYSNNSYEDSMKQFWDIFDPEGWSLWICRYKFNAENTRLFMTSNLVGGFVQRSGEIRKWAFGCMQITGEEGKELLVSGAWLIRGQSIQPMVDANDDANWYDWTKVATPVSDEDKALVTEMWCSETTVEGRPVLDGKVFK 1275
            QVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLK ALGALEKALL RTYLVGDKITLADITVASALVYPMKLV+SPEYRKAFPCVTRWFTTCVNQPQF AVIGTVELAKEEMTAEGAP      XXXXXXXXXXXXXXXXXXX DDGSRDLGMPA EKKAPHPLAVMDKEAKSPF GDTWKK    IYSNNSYE+SMKQFW++FDPEGWSLWICRYK+NAENTRLFMTSNLVGGF+QRSGEIRKWAFGCMQITGEEGKEL+VSGAWLIRGQSIQPMVDANDDANWYDW KVATPVSD DKALVTEMWCSETTVEGRPVLDGKVFK
Sbjct:   70 QVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKIALGALEKALLHRTYLVGDKITLADITVASALVYPMKLVVSPEYRKAFPCVTRWFTTCVNQPQFMAVIGTVELAKEEMTAEGAPKX-XXXXXXXXXXXXXXXXXXXXXXEDDGSRDLGMPAEEKKAPHPLAVMDKEAKSPFVGDTWKK----IYSNNSYEESMKQFWEMFDPEGWSLWICRYKYNAENTRLFMTSNLVGGFIQRSGEIRKWAFGCMQITGEEGKELIVSGAWLIRGQSIQPMVDANDDANWYDWVKVATPVSDADKALVTEMWCSETTVEGRPVLDGKVFK 398
[Close]
BLAST of mRNA_L-elsbetiae_contig10463.456.1 vs. uniprot
Match: A0A7S3XWT6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWT6_HETAK)

HSP 1 Score: 536 bits (1380), Expect = 3.660e-187
Identity = 285/441 (64.63%), Postives = 333/441 (75.51%), Query Frame = 1 
Query:    1 MALKLWTNPANFRAFKVLIAAEYNGVELEVPEFNHPSDSKSPDFLAKSPLGRVPVLETPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKTALGALEKALLERTYLVGDKITLADITVASALVYPMKLVMSPEYRKAFPCVTRWFTTCVNQPQFKAVIGTVELAKEEMTAEGAPAAP--------KKEXXXXXXXXXXXXXXXXXXXXDDGSRDLGMPAP-------EKKAPHPLAVMDKEAKSPFAGDTWKKARRDIYSN-NSYEDSMKQFWDIFDPEGWSLWICRYKFNAENTRLFMTSNLVGGFVQRSGEIRKWAFGCMQITGEEGKELLVSGAWLIRGQSIQPMVDANDDANWYDWTKVATPVSDEDKALVTEMWCSETTVEGRPVLDGKVFK 1275
            M+LKL+T P NFRAFK+L+AAEYNG+++E+P+F    D+K+PDFLAKSPLG+VPVL+TPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDF   E+ELPAT+W YPVIGYMP+N  A  KAK DL  ALG LE  LL++TYLVGDKITLADIT+ SALVYPMKLVM   YR  FPCV RWFTT VNQPQFKAV+G V L + E+TA GAPA          K      XXXXXXXXXXXXX   +  ++    P         EKK  H L V+DK + SPF  DTWKK     YSN  S++ +M  FW++FD EGWSLW C Y +NAENT +FMTSNLV GFVQRSGEIRKW FG MQI GE   E++  G WL+RGQ I+P++DANDDA +Y WTK+A PVSD DKA+++EMWCSETT+EG+ + D KVFK
Sbjct:    1 MSLKLYTYPGNFRAFKILVAAEYNGIDIEIPDFKMLEDNKTPDFLAKSPLGKVPVLDTPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFSTQEVELPATMWFYPVIGYMPFNPLATEKAKTDLAKALGVLEGHLLDKTYLVGDKITLADITLCSALVYPMKLVMDAAYRADFPCVQRWFTTVVNQPQFKAVVGEVVLCETELTASGAPAPAAGGGKKDKKAGKAKGXXXXXXXXXXXXXPKKEKAAKKEKAPXXXXXXXXTEKKEEHVLKVLDKTSPSPFNNDTWKKE----YSNCTSFDAAMATFWEMFDAEGWSLWKCTYNYNAENTVMFMTSNLVSGFVQRSGEIRKWGFGVMQIVGEGPFEVV--GVWLMRGQEIKPLLDANDDAEYYTWTKIAAPVSDADKAMISEMWCSETTIEGKKIQDCKVFK 435
[Close]
BLAST of mRNA_L-elsbetiae_contig10463.456.1 vs. uniprot
Match: W7TL25_9STRA (Elongation factor 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL25_9STRA)

HSP 1 Score: 469 bits (1207), Expect = 6.670e-161
Identity = 261/440 (59.32%), Postives = 321/440 (72.95%), Query Frame = 1 
Query:    1 MALKLWTNPANFRAFKVLIAAEYNGVELEVPEFNHPSDSKSPDFLAKSPLGRVPVLETPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKTALGALEKALLERTYLVGDKITLADITVASALVYPMKLVMSPEYRKAFPCVTRWFTTCVNQPQFKAVIGTVELAKEEMTAEGAP--------AAPKKEXXXXXXXXXXXXXXXXXXXX-----DDGSRDLGMPAPEKKAPHPLAVMDKEAKSPFAGDTWKKARRDIYSN-NSYEDSMKQFWDIFDPEGWSLWICRYKFNAENTRLFMTSNLVGGFVQRSGEIRKWAFGCMQITGEEGK-ELLVSGAWLIRGQSIQPMVDANDDANWYDWTKVATPVSDEDKALVTEMWCSETTVEGRPVLDGKVFK 1275
            MALKL+TNP NFRAFK+L+AA YNGV+++V + +  +  ++ D LAKSP G+VPVLETPQG +FESNAIARY+AR RRDT+LYGVSFF+S  VD+WIDF A E+ELPAT+W YPV GY+P+N A   KAK DL  A+  L+  L ++TYLVG+K+TLADITVASALVYP K+VMSPEYR  +P V RWF T VNQP F+AVIG V LA++E+   GAP         A KKEXXXXXXXXXXXXXXXXXXX      +D    L     +K A HPL ++D+E+ S F  DTWKK     YSN  SY+ +M +FW +FD  G+SLW C Y++N+E T+LFMT NLV GFVQR+ E+RKWAFGCM I GE+   ++ + G WL+RGQS   +  AN DA +Y WTKV TPVSDEDK  V E WCS+ ++ G PVLD KVFK
Sbjct:    1 MALKLYTNPGNFRAFKILVAALYNGVDIDVVDLDLAAKKRT-DVLAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDAWIDFAAQEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAAMEILDNHLADKTYLVGEKVTLADITVASALVYPYKIVMSPEYRAQYPHVLRWFLTIVNQPHFRAVIGDVVLAEKELVPSGAPPALALPAKGAGKKEXXXXXXXXXXXXXXXXXXXAPAKTGEDLEEQLAKEEKKKAAEHPLKILDRESPSEFVMDTWKKT----YSNARSYDQAMDEFWKVFDSLGYSLWFCNYQYNSELTKLFMTCNLVSGFVQRTDELRKWAFGCMWILGEDAPGKMEIRGLWLMRGQSDSYIKSANPDAEFYTWTKVPTPVSDEDKKKVQEYWCSDDSLAGLPVLDCKVFK 435
[Close]
BLAST of mRNA_L-elsbetiae_contig10463.456.1 vs. uniprot
Match: F0YK49_AURAN (Uncharacterized protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK49_AURAN)

HSP 1 Score: 454 bits (1169), Expect = 2.380e-155
Identity = 229/432 (53.01%), Postives = 299/432 (69.21%), Query Frame = 1 
Query:    1 MALKLWTNPANFRAFKVLIAAEYNGVELEVPEFNHPSDSKSPDFLAKSPLGRVPVLETPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKTALGALEKALLERTYLVGDKITLADITVASALVYPMKLVMSPEYRKAFPCVTRWFTTCVNQPQFKAVIGTVELA----KEEMTAEGAPAAPKKEXXXXXXXXXXXXXXXXXXXXDDGSRDLGMPAPEKKAPHPLAVMDKEAKSPFAGDTWKKARRDIYSNNSYEDSMKQFWDIFDPEGWSLWICRYKFNAENTRLFMTSNLVGGFVQRSGEIRKWAFGCMQITG-EEGKELLVSGAWLIRGQSIQPMVDANDDANWYDWTKVATPVSDEDKALVTEMWCSETT--VEGRPVLDGKVFK 1275
            M L+L+T P NFRAFK L+AAEY GV+++VP+F+    +K+P FLA SP+G+VPVL+TPQG+IFESNAIARYVAR+R+D+E+YG +F+ESA +DSW+DFCAHE+ELP T+W YP+IGYMP+N AA +KAKE +  AL +LE+ L+++TY+VGD ITLADIT+ SALVYP KL M   +R  FP V RWF  CV+QPQF AVIG V LA    K++ + +G+ A    E                          L  P PEKK  HPL ++DKE  S F GD WKK    +YSNN  +   KQFW+++DP+GWSLW+CR+K+N EN + FM +N +GGFVQRS  +RKWAFG M +TG E+   + +SG WL+RGQS++ + DANDDA  Y WTK+    S E    V E W ++    +EG+ V DGKVFK
Sbjct:    1 MTLQLYTYPGNFRAFKALVAAEYVGVDIDVPDFDMEKTAKTPSFLAMSPMGKVPVLKTPQGAIFESNAIARYVARLRKDSEIYGRTFYESALIDSWVDFCAHELELPCTMWVYPIIGYMPFNAAASAKAKEHVTDALDSLERHLVDKTYIVGDAITLADITLVSALVYPAKLAMDKLFRARFPNVFRWFDLCVHQPQFVAVIGDVALADKKGKKDKSNKGSDANISVENASRDKKEKLPKKEKAKV------EQLTEPKPEKKKDHPLKILDKEEPSEFVGDVWKK----VYSNNPPDVWKKQFWEMYDPKGWSLWVCRFKYNHENEKQFMCANAIGGFVQRSDAVRKWAFGAMFVTGSEQDLPIEISGVWLMRGQSVEHLKDANDDALCYTWTKI-DHTSQEMMDFVAEYWAADVDGYLEGKLVTDGKVFK 421
[Close]
BLAST of mRNA_L-elsbetiae_contig10463.456.1 vs. uniprot
Match: A0A7R9UHZ1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UHZ1_9STRA)

HSP 1 Score: 441 bits (1135), Expect = 1.080e-149
Identity = 252/457 (55.14%), Postives = 320/457 (70.02%), Query Frame = 1 
Query:    4 ALKLWTNPANFRAFKVLIAAEYNGVELEVPEFNHPSDSKSPDFLAKSPLGRVPVLETPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKTALGALEKALLERTYLVGDKITLADITVASALVYPMKLVMSPEYRKAFPCVTRWFTTCVNQPQFKAVIGTVELAKEEMTAEGAPAAPKKEXXXXXXXXXXXXXXXXXXXXDDG------------------SRDLGMPAPEK--KAPHP-----LAVMDKEAKSPFAGDTWKKARRDIYSNN-SYEDSMKQFWDIFDPEGWSLWICRYKFNAENTRLFMTSNLVGGFVQRSGEIRKWAFGCMQITG-----EEGKELLVSGAWLIRGQSIQPMVDANDDANWYDWTKVATPVSDEDKALVTEMWCSET--TVEGRPVLDGKVFK 1275
            ++ L+T   NFRAFK+LIAAEYNGVEL++P+F   +D+ +P+FL+KSP+G+VPVLET QG IFESNAIAR+VA +RRDTEL G SFFES QVDSW+D+C HE+E+PAT+W YPV+GYMPYN  A  KA+ DL  AL  LE  LL++TYLVG+KITLADI VA++L+YP  L+  PEYR +FPCV RWF TCVNQP+F AV GTV LA++E+ A+G        XXXXXXXXXXXXXXXXXXXX                     +++ G  A EK  KA  P     L  +DK+A+S  + D WK+     YSN  +Y+ +M++FW + D EGWSLW   Y++N++N +LFMTSNL  GF+QRSGEIRKWAFG   ITG     E G ++ VSG WL+RGQ I PM++AN DA ++ WTK+    S E + LV + W  +    +EGRPVLD KVFK
Sbjct:    3 SMTLYTFQGNFRAFKILIAAEYNGVELDIPDFKMGTDNLTPEFLSKSPMGKVPVLETSQGCIFESNAIARFVANIRRDTELTGTSFFESGQVDSWMDWCTHELEIPATMWLYPVLGYMPYNAMATEKARGDLAKALSVLEAYLLDKTYLVGEKITLADIHVATSLIYPFSLLCGPEYRSSFPCVMRWFNTCVNQPEFVAVCGTVTLAEKELVAKGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEAGEDAEEKPKKAEKPAHIVALETLDKKARSSMSMDAWKRE----YSNCVTYDAAMEEFWKMLDREGWSLWKQEYQYNSDNKKLFMTSNLCSGFLQRSGEIRKWAFGTCVITGLAEDAEGGPDMSVSGLWLLRGQEITPMLEANPDAEYHTWTKLEDLDSAETQQLVKDFWTRDVGELIEGRPVLDSKVFK 455
[Close]
BLAST of mRNA_L-elsbetiae_contig10463.456.1 vs. uniprot
Match: A0A6G0SF08_9STRA (Uncharacterized protein n=29 Tax=Peronosporaceae TaxID=4777 RepID=A0A6G0SF08_9STRA)

HSP 1 Score: 425 bits (1093), Expect = 4.870e-144
Identity = 215/430 (50.00%), Postives = 285/430 (66.28%), Query Frame = 1 
Query:    1 MALKLWTNPANFRAFKVLIAAEYNGVELEVPEFNHPSDSKSPDFLAKSPLGRVPVLETPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKTALGALEKALLERTYLVGDKITLADITVASALVYPMKLVMSPEYRKAFPCVTRWFTTCVNQPQFKAVIGTVELAKEEMTAEG----APAAPKKEXXXXXXXXXXXXXXXXXXXXDDGSRDLGMPAPEKKAPHPLAVMDKEAKSPFAGDTWKKARRDIYSN-NSYEDSMKQFWDIFDPEGWSLWICRYKFNAENTRLFMTSNLVGGFVQRSGEIRKWAFGCMQITGEEGKELLVSGAWLIRGQSIQPMVDANDDANWYDWTKVATPVSDEDKALVTEMWCSETTVEGRPVLDGKVFK 1275
            M LKL+T PAN+R FKVL+AAEYNGV +E+PEF+   D KS +F +K+P+G+VP+LET +GSIFES AIA+YVAR+R DT LYG +FFES QVDSWIDF A+E+E+P   W YP++G+  +N  A++KAK D+K AL  LE  L  RTY+VG++ITLADI +A+ALVYP K V+  E+RK +  + RWF T VNQP+F+AV+G V L    +TAEG      AAPKK+                     +           KK  HPLAV+++E  S    D WK      YSN     ++MK FW+  D EG+SLW C Y +N+ENT++FMT N VGGF+QRS  +RK+AFG M + G EG E++++G WL RG S + M++AN DA +Y W K    ++DE KA VT  WC+E  +EG+P+ D KVFK
Sbjct:    1 MVLKLYTYPANYRVFKVLVAAEYNGVNIELPEFDMAKDLKSEEFQSKTPVGKVPILETEEGSIFESGAIAKYVARLRADTGLYGKTFFESGQVDSWIDFSAYELEIPLQAWLYPILGWSKFNAEALTKAKADVKKALQTLENHLHLRTYIVGEQITLADIFIATALVYPFKFVLDKEFRKPYSAMNRWFATLVNQPEFQAVVGDVPLIDVALTAEGDNSAKKAAPKKDAPKK-----------------EKXXXXXXXXXPKKVEHPLAVLNREKPSSMVLDAWKVQ----YSNARDLSNAMKWFWENLDTEGYSLWFCDYNYNSENTKMFMTCNAVGGFLQRSEAMRKYAFGVMDVCGAEGSEIIITGCWLFRGDSEKHMIEANPDAEYYTWKKAG--LNDETKARVTAYWCNEDELEGKPIADSKVFK 407
[Close]
BLAST of mRNA_L-elsbetiae_contig10463.456.1 vs. uniprot
Match: A0A6A3Z3E0_9STRA (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3Z3E0_9STRA)

HSP 1 Score: 421 bits (1083), Expect = 1.260e-142
Identity = 217/428 (50.70%), Postives = 282/428 (65.89%), Query Frame = 1 
Query:    7 LKLWTNPANFRAFKVLIAAEYNGVELEVPEFNHPSDSKSPDFLAKSPLGRVPVLETPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKTALGALEKALLERTYLVGDKITLADITVASALVYPMKLVMSPEYRKAFPCVTRWFTTCVNQPQFKAVIGTVELAKEEMTAEGAPAA----PKKEXXXXXXXXXXXXXXXXXXXXDDGSRDLGMPAPEKKAPHPLAVMDKEAKSPFAGDTWKKARRDIYSN-NSYEDSMKQFWDIFDPEGWSLWICRYKFNAENTRLFMTSNLVGGFVQRSGEIRKWAFGCMQITGEEGKELLVSGAWLIRGQSIQPMVDANDDANWYDWTKVATPVSDEDKALVTEMWCSETTVEGRPVLDGKVFK 1275
            +KL+T P N+R FKVLIAAEYNG+ +E+P+F+   D K+  F AK+PLG+VP+LET +GSIFES AIARYVAR+R DT LYG +FFES QVDSWIDF A+E+E+P  +W +P++G   +N AA++KAK D+K AL  LE  L  RTYLVG++ITLADI VASALVYP K V+  E+RK +  V RWF T VNQP+F+AV+G V L    +TAEG  +A    PKKE                       +         KK  HPLAV+++E  S    D WK      YSN      +MK FW+  D EG+SLW C Y +N+ENT++FMT N VGGF+QRS  +RK+AFG M + G EG E++++G WL RG S + M++AN DA +Y W K    ++DE KA VT  WC+E  +EG+P+ D KVFK
Sbjct:    1 MKLYTYPGNYRVFKVLIAAEYNGINIELPKFDMAKDLKTKAFKAKTPLGKVPILETEEGSIFESGAIARYVARLRPDTGLYGKTFFESGQVDSWIDFSAYELEVPLEVWVHPILGVGKFNAAAMTKAKADVKKALQTLENHLHLRTYLVGEQITLADIVVASALVYPFKFVLDKEFRKPYSAVNRWFATLVNQPEFQAVVGDVPLIDVALTAEGDNSAKKDAPKKEK----------------------AAXXXXXXKPKKVEHPLAVLNREEPSSMVLDAWKVQ----YSNARDLSTAMKWFWENLDTEGYSLWFCDYNYNSENTKMFMTCNAVGGFLQRSEAMRKYAFGVMDVCGAEGSEIIITGCWLFRGDSEKHMIEANPDAEYYTWKKAE--LNDETKARVTAYWCNEDELEGKPIADSKVFK 400
[Close]
BLAST of mRNA_L-elsbetiae_contig10463.456.1 vs. uniprot
Match: A0A8J2WRT9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WRT9_9STRA)

HSP 1 Score: 421 bits (1081), Expect = 3.930e-142
Identity = 237/430 (55.12%), Postives = 299/430 (69.53%), Query Frame = 1 
Query:    1 MALKLWTNPANFRAFKVLIAAEYNGVELEVPEFNHPSDSKSPDFLAKSPLGRVPVLETPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKTALGALEKALLERTYLVGDKITLADITVASALVYPMKLVMSPEYRKAFPCVTRWFTTCVNQPQFKAVIGTVELAKEEMTAEGAPAAP---KKEXXXXXXXXXXXXXXXXXXXXDDGSRDLGMPAPEKKAPHPLAVMDKEAKSPFAGDTWKKARRDIYSNNSYEDSMKQFWDIFDPEGWSLWICRYKFNAENTRLFMTSNLVGGFVQRSGEIRKWAFGCMQITGEEG-KELLVSGAWLIRGQSIQPMVDANDDANWYDWTKVATPVSDEDKALVTEMWCSETT--VEGRPVLDGKVF 1272
            MAL L T P NFRAFK LIAAEY GVE+ V +     D+K+   L  SP G+VPVLETPQG+IFESNAIARYVAR+R D +LYG +F+ESA VDSWIDFCAHE+ELP T+W YP+IGYMP++  A  KAK  +  AL  L+  LL++TY+VG+ +TLADIT+ASALVYP KL M P++R  FP V RWF  CV+QPQF AVIG V LA+ EM  EGA +AP   KKE       XXXXXXXXXXXXX          AP KK  HPL ++DK++ SP  GD WK+     Y NN  E   ++FW++FDP+GW+LW+CR+K+N EN + FM +N +GGFVQRS  +RKWAFG M +TG E    + +SG WL+RG +++ + +ANDDA  Y WTK+    S   +ALV E W ++    +EG+ V DGK+F
Sbjct:    1 MALTLVTYPGNFRAFKALIAAEYAGVEIAVKDV----DAKAAAKL--SPTGKVPVLETPQGTIFESNAIARYVARLRSDADLYGRTFYESAVVDSWIDFCAHELELPCTLWVYPIIGYMPFSGPAYGKAKAHVSQALKTLDAHLLDKTYMVGEAMTLADITIASALVYPAKLAMDPKFRAQFPNVFRWFDLCVHQPQFVAVIGDVALAESEMKPEGASSAPQGGKKEAKKEKAPXXXXXXXXXXXXX------XXXXAP-KKVEHPLKILDKKSPSPLNGDEWKRT----YKNNPPEVWKQKFWEMFDPKGWALWVCRFKYNHENEKQFMCANAIGGFVQRSDAMRKWAFGTMFVTGSEACLPIEISGCWLMRGDTVENLTEANDDALCYTWTKI-DHTSAAGRALVEEYWTADVDGFLEGKLVTDGKLF 412
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10463.456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6C4_ECTSI2.790e-28394.59Eukaryotic elongation factor-1 B gamma n=1 Tax=Ect... [more]
A0A836CFW7_9STRA8.250e-21373.67Eukaryotic elongation factor-1 B gamma n=1 Tax=Tri... [more]
A0A6H5JF10_9PHAE1.240e-20992.51GST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S3XWT6_HETAK3.660e-18764.63Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
W7TL25_9STRA6.670e-16159.32Elongation factor 1 n=2 Tax=Monodopsidaceae TaxID=... [more]
F0YK49_AURAN2.380e-15553.01Uncharacterized protein n=2 Tax=Aureococcus anopha... [more]
A0A7R9UHZ1_9STRA1.080e-14955.14Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6G0SF08_9STRA4.870e-14450.00Uncharacterized protein n=29 Tax=Peronosporaceae T... [more]
A0A6A3Z3E0_9STRA1.260e-14250.70Uncharacterized protein n=4 Tax=Peronosporaceae Ta... [more]
A0A8J2WRT9_9STRA3.930e-14255.12Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10463contigL-elsbetiae_contig10463:1747..5647 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score780.4
Seed ortholog evalue4.3e-223
Seed eggNOG ortholog2880.D7G6C4
Preferred nameEEF1G
KEGG rclassRC00055,RC00523
KEGG koko:K01872,ko:K01873,ko:K03233,ko:K15439
KEGG ReactionR03038,R03665
KEGG Pathwayko00970,ko05134,map00970,map05134
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0001047,GO:0001067,GO:0002181,GO:0002182,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0003723,GO:0003746,GO:0003824,GO:0004364,GO:0004812,GO:0004832,GO:0005085,GO:0005488,GO:0005507,GO:0005509,GO:0005515,GO:0005543,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005773,GO:0005829,GO:0005840,GO:0005853,GO:0005886,GO:0005911,GO:0006082,GO:0006139,GO:0006355,GO:0006357,GO:0006399,GO:0006412,GO:0006414,GO:0006417,GO:0006418,GO:0006438,GO:0006449,GO:0006518,GO:0006520,GO:0006575,GO:0006725,GO:0006749,GO:0006790,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0008289,GO:0009058,GO:0009059,GO:0009506,GO:0009605,GO:0009607,GO:0009615,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010035,GO:0010038,GO:0010043,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016070,GO:0016740,GO:0016765,GO:0016874,GO:0016875,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0022613,GO:0030054,GO:0030312,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032991,GO:0034248,GO:0034641,GO:0034645,GO:0034660,GO:0035770,GO:0036464,GO:0042221,GO:0042254,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043244,GO:0043436,GO:0043603,GO:0043604,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046686,GO:0046872,GO:0046914,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051020,GO:0051128,GO:0051171,GO:0051173,GO:0051186,GO:0051246,GO:0051252,GO:0051254,GO:0051704,GO:0051707,GO:0055044,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0098772,GO:0140098,GO:0140101,GO:0140110,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990904,GO:2000112,GO:2001141
EggNOG free text desc.translation elongation factor activity
EggNOG OGsCOG0625@1,KOG0867@2759,KOG1627@1,KOG1627@2759
EC6.1.1.7,6.1.1.9
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03012,ko03016,ko03019
Ec32 ortholog descriptioneukaryotic elongation factor-1 B gamma
Ec32 orthologEc-10_001330.1
Exons8
Model size1278
Cds size1278
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10463.456.1prot_L-elsbetiae_contig10463.456.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10463 1747..5647 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815270.4871302-CDS-L-elsbetiae_contig10463:1746..19261622815270.4871302-CDS-L-elsbetiae_contig10463:1746..1926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 1747..1926 +
1691682808.2561028-CDS-L-elsbetiae_contig10463:1746..19261691682808.2561028-CDS-L-elsbetiae_contig10463:1746..1926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 1747..1926 +
1622815270.5012586-CDS-L-elsbetiae_contig10463:2821..29171622815270.5012586-CDS-L-elsbetiae_contig10463:2821..2917Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 2822..2917 +
1691682808.2719383-CDS-L-elsbetiae_contig10463:2821..29171691682808.2719383-CDS-L-elsbetiae_contig10463:2821..2917Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 2822..2917 +
1622815270.5123975-CDS-L-elsbetiae_contig10463:3262..34361622815270.5123975-CDS-L-elsbetiae_contig10463:3262..3436Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 3263..3436 +
1691682808.2798018-CDS-L-elsbetiae_contig10463:3262..34361691682808.2798018-CDS-L-elsbetiae_contig10463:3262..3436Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 3263..3436 +
1622815270.523532-CDS-L-elsbetiae_contig10463:3645..38701622815270.523532-CDS-L-elsbetiae_contig10463:3645..3870Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 3646..3870 +
1691682808.2877192-CDS-L-elsbetiae_contig10463:3645..38701691682808.2877192-CDS-L-elsbetiae_contig10463:3645..3870Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 3646..3870 +
1622815270.5347424-CDS-L-elsbetiae_contig10463:4507..46901622815270.5347424-CDS-L-elsbetiae_contig10463:4507..4690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 4508..4690 +
1691682808.295897-CDS-L-elsbetiae_contig10463:4507..46901691682808.295897-CDS-L-elsbetiae_contig10463:4507..4690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 4508..4690 +
1622815270.6052082-CDS-L-elsbetiae_contig10463:4855..50401622815270.6052082-CDS-L-elsbetiae_contig10463:4855..5040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 4856..5040 +
1691682808.3039756-CDS-L-elsbetiae_contig10463:4855..50401691682808.3039756-CDS-L-elsbetiae_contig10463:4855..5040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 4856..5040 +
1622815270.618358-CDS-L-elsbetiae_contig10463:5200..53111622815270.618358-CDS-L-elsbetiae_contig10463:5200..5311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 5201..5311 +
1691682808.3120081-CDS-L-elsbetiae_contig10463:5200..53111691682808.3120081-CDS-L-elsbetiae_contig10463:5200..5311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 5201..5311 +
1622815270.6279883-CDS-L-elsbetiae_contig10463:5523..56471622815270.6279883-CDS-L-elsbetiae_contig10463:5523..5647Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 5524..5647 +
1691682808.3216524-CDS-L-elsbetiae_contig10463:5523..56471691682808.3216524-CDS-L-elsbetiae_contig10463:5523..5647Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10463 5524..5647 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10463.456.1

>prot_L-elsbetiae_contig10463.456.1 ID=prot_L-elsbetiae_contig10463.456.1|Name=mRNA_L-elsbetiae_contig10463.456.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=426bp
MALKLWTNPANFRAFKVLIAAEYNGVELEVPEFNHPSDSKSPDFLAKSPL
GRVPVLETPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFC
AHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKTALGALEKALLERTYL
VGDKITLADITVASALVYPMKLVMSPEYRKAFPCVTRWFTTCVNQPQFKA
VIGTVELAKEEMTAEGAPAAPKKEKKPQPAKKEKKKKEVKKEEEDDGSRD
LGMPAPEKKAPHPLAVMDKEAKSPFAGDTWKKARRDIYSNNSYEDSMKQF
WDIFDPEGWSLWICRYKFNAENTRLFMTSNLVGGFVQRSGEIRKWAFGCM
QITGEEGKELLVSGAWLIRGQSIQPMVDANDDANWYDWTKVATPVSDEDK
ALVTEMWCSETTVEGRPVLDGKVFK*
back to top

mRNA from alignment at L-elsbetiae_contig10463:1747..5647+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10463.456.1 ID=mRNA_L-elsbetiae_contig10463.456.1|Name=mRNA_L-elsbetiae_contig10463.456.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3901bp|location=Sequence derived from alignment at L-elsbetiae_contig10463:1747..5647+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTCTGAAGCTGTGGACGAATCCCGCTAACTTCCGAGCCTTCAAGGT
CCTAATCGCCGCTGAATACAATGGTGTAGAGCTGGAGGTGCCTGAGTTCA
ATCATCCCAGCGACAGCAAGTCGCCGGATTTCCTTGCCAAGTCGCCTCTC
GGACGCGTGCCTGTTCTCGAGACTCCTCAGGTATGGGAGTCTCAATCGCC
GGCGGGGTACACGATCCCATTGCATTTTATTAATGTATTTACATGCCTCT
CATTTCCCTGTCTCTCGCTGGATTGATTCACAAGTAACATAGTGTCTCCC
TGCTCCACTCTCCCCCGAGCAAATGTCAAATGTATGTAACCTTCAGGTTA
CGTAACGTAACACACAAACACACGGTAAGGTAGACGATGACACACGCCCC
TTCCTTTCTACTATGGAGTAGTTGAAAGCTGCGGTACAGGGAGCGTCGGA
ATGGTGTTGATTGCTAAAAATGTCATGCACATCGCCAAACAGGTGTTCCC
AGGTAGTCCTGATCATACACCCAGACATCGGAACGTGCTTGGTGTGGCGA
ATGCCGTAGACACGTATAGACCCATTTCACATTTCTCAAGGCTCTGCTGT
GTTTGAAATCATGAAAGAAAGAACCTCCCCATCAAGAGACGGGGACTCGG
TGTGGTAAATCAGCCCACCAAACAGCAGTGATGGAAGACTAGCGTGGTGC
GGCCGAGTAGAAAAAACATCGAAAATATTTGAAAAGTTCGAGTTTCTCTT
AATCTTCCGTTGCTGACCCTTGCTGTTGAATGTCTTGCCCAAGAAACGGT
ACACTGAAAAAAATGAAATGAAATGGATCCGAATGTCCCACAAAGCACGA
AAACACAAAATCAGCTCCACAGATAAGAAAGTCTTGAAGGCCTCCGCGCT
CCTCTCTCTACACGCTATGCGAGGTGAAACCTAAAGTGGAAAAACCAACA
TCACCAACCGCGGGGTATACACTCCCTGGTCAAGATCGAAACAGTTTGAA
AGTGAAGACAAAAAAAAAACACGTTTATCTCTTCCAATTCCTAAGCAACC
CACCCCACCCTCAACTTTTCGACAGGGCTCTATCTTCGAATCGAATGCCA
TCGCACGATACGTTGCCCGCATGCGCCGAGACACGGAGCTGTACGGGGTT
TCCTTCTTCGAGTCGGCGCAGGTAAGTTACGCACACGTTCGAGTGTCACG
TCGTCGGACAAGGGTAAAGAGTGCCACTGCCTGTCGATATCGGCCTCGGG
TGTATTTTTCTTCAAAACATAGAAGTATATCTTTGACGTCTAGACAGCAG
TCTCGGTTTCGCCGAGCCAGAGGCTCCTGTACGTTGCACAAAACTGATTT
TTGCCTCGGCTTTCGACCGCCGGATATCTGTATTGACAGGCAGGCTTAAA
GCTGTTGCCAAGTAAATAAATAGTGCTTGAGCTGTGCAGAGGAGTTTCCC
TTAAAGAAAATGAAAAATGGCCCGCGTGAACATGCGCACCCGGCATTCCC
GGAAAAATTGACACAGGTTGACTCTTGGATCGACTTTTGTGCCCACGAGA
TTGAGCTTCCCGCCACCATCTGGTGCTACCCGGTTATCGGCTACATGCCC
TACAACGATGCCGCCGTAAGCAAGGCTAAGGAAGACCTGAAGACCGCCTT
GGGCGCTCTGGAGAAGGCTCTGCTGGAGAGGACATACCTGGTGATTAAAC
AGCTGTGCCGGCTGCCGACTTTGCTCTGTTCCCTGCCAGGACTCCCCGAA
ACGTGAAGTGTGGATACGAACCGCAAAAAGTAGCTTCCCAGGAACACTGC
GTGCTGGATCGGCTTGATACGTAACCTTAGCCCGAGTCGATTCCACTCAC
CCCCCCCCCCCAACCGTCCCCCGATTCCTTCGGTGCGTACGTGTTTTAGG
TTGGAGACAAGATCACCTTGGCGGATATCACCGTGGCGTCGGCGCTGGTG
TATCCCATGAAGCTTGTCATGAGCCCGGAGTACCGCAAGGCGTTCCCTTG
CGTGACTCGGTGGTTCACCACTTGTGTCAATCAGCCGCAGTTCAAGGCCG
TGATCGGGACGGTGGAGCTAGCCAAGGAGGAGATGACTGCGGAAGGAGCC
CCTGCGGCACCTAAGAAGGAAAAGGTAGGTCTTCATTTGTCCGTCATGGG
ACATGAATGCTACACATATTTCCTTCGGGCGCATCAGCAAAGTTTGGACA
TGACATCAGGAGTATTTTGTACGAGGAGTAGAGACAGTGTTGGACGATTC
AAGTTGAAAGGCTCATGAGAAGAGCAACTCTCGCCCTCAGAACTATAAGA
TGTCGAGAAAAGCGTAGATTCAAAAGTCACCCAGTGGTGGGTTCTCAGTT
TGATGTTTCTCGCGTAATACGAAGTATATACCTGGTACAACGTTGAAAAA
TGTGCGAAACAGTGGAACATTCCTTGTGGTAGTTGTGAACGTCTATCGAA
CGATAATAGACAGATTAAGCAGCGAACACTCCATCGAAAAATCAAAGGAC
TTTGTTGGTCAACCCAATCTTACTACTGTTTTCCGTTTACAGTCAATCTT
GGCACTTCGTGCGTCTTCTGTTATAGGTATACATGTCAGCTCACCTGCAT
TTCGGCGGCTTCGCCCCCGATTAATCCACCACCGGTCAGCTTATGGAGGG
TGTTCCTGTCAGACACACGGTATAATTATCTTCCAGAGTAAAAAGAGACT
ATGTCGATCTTACACTCACTCTGCTCCTGCTTTTGCGCACCACACCACTC
CCCTTCTCCAGAAGCCGCAGCCCGCCAAGAAGGAGAAGAAGAAGAAGGAG
GTCAAGAAGGAGGAGGAGGACGATGGGTCGAGGGACTTGGGGATGCCCGC
CCCGGAGAAGAAGGCCCCCCACCCTCTCGCCGTTATGGACAAGGAGGCGA
AGTCGCCGTTCGCGGGAGACACGTGGAAGAAGGCAAGACGTGACGTTTTC
TAGTGCGTGTTCTGGGGATTTGGCGATGGTTGATTTGCATACTGCAGCAA
GTGATGATATTTTATCGTTGTAGGTTTGGTCAGAGTTCAGCTATGAGCTC
GTTATCGTACTCTAGCGTTCCGTGCTGCCGCTGACGTGTTCTCGCTTGCC
CGGTTTCAGATTTACTCCAACAACTCATACGAGGACAGCATGAAGCAATT
CTGGGACATCTTCGACCCCGAGGGGTGGTCCCTCTGGATTTGCCGGTACA
AGTTCAACGCGGAAAACACTCGTTTGTTCATGACGTCGAACTTGGTTGGC
GGGTTCGTCCAGCGCTCTGGCGAGATCAGGAAATGGGCGTTTGGGTGAGA
TACAACGTGCCGCTTATGCTGAGGAAATAGCACACCACCAGATCTCATGA
AATGACACGAAGTACGAGGTGTTGAAGCGCTTGTATGTATGGCTTGGCTT
ACGCAGACCTCGCCATATTTACATTTTCAATACGTTTCCGCCAACCTTGT
GCAGATGCATGCAGATCACCGGCGAGGAGGGAAAAGAGCTACTCGTGTCA
GGAGCGTGGCTCATCCGTGGGCAGAGCATTCAGCCCATGGTAGACGCTAA
CGACGACGCTAACTGGTGAGTTGAACTTCTACTGGTACATAGCTTTTGTG
AGCATGCGCGGAGGGAGAGCGAGAGACTGCTTGTACTCATCCTCCTCTCA
GTGGGGTTTATCAGTTCAAGTAATGTACAGAGAATATGCGCTTTCTCGAA
TGTGGATCGATGTCCTTCCTCTGTTGCTGTTTCGTTCAGTAAATTACATC
TTACACCTTCCCCGATCCCGTCATCAGGTATGACTGGACTAAGGTGGCCA
CCCCCGTGTCTGACGAAGACAAGGCGCTGGTGACAGAGATGTGGTGCAGC
GAAACCACGGTGGAAGGAAGGCCCGTCCTTGACGGAAAGGTCTTCAAGTA
G
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig10463:1747..5647+

>mRNA_L-elsbetiae_contig10463.456.1 ID=mRNA_L-elsbetiae_contig10463.456.1|Name=mRNA_L-elsbetiae_contig10463.456.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2556bp|location=Sequence derived from alignment at L-elsbetiae_contig10463:1747..5647+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTCTGAAGCTGTGGACGAATCCCGCTAACTTCCGAGCCTTCAAGGT
CCTAATCGCCGCTGAATACAATGGTGTAGAGCTGGAGGTGCCTGAGTTCA
ATCATCCCAGCGACAGCAAGTCGCCGGATTTCCTTGCCAAGTCGCCTCTC
GGACGCGTGCCTGTTCTCGAGACTCCTCAGATGGCTCTGAAGCTGTGGAC
GAATCCCGCTAACTTCCGAGCCTTCAAGGTCCTAATCGCCGCTGAATACA
ATGGTGTAGAGCTGGAGGTGCCTGAGTTCAATCATCCCAGCGACAGCAAG
TCGCCGGATTTCCTTGCCAAGTCGCCTCTCGGACGCGTGCCTGTTCTCGA
GACTCCTCAGGGCTCTATCTTCGAATCGAATGCCATCGCACGATACGTTG
CCCGCATGCGCCGAGACACGGAGCTGTACGGGGTTTCCTTCTTCGAGTCG
GCGCAGGGCTCTATCTTCGAATCGAATGCCATCGCACGATACGTTGCCCG
CATGCGCCGAGACACGGAGCTGTACGGGGTTTCCTTCTTCGAGTCGGCGC
AGGTTGACTCTTGGATCGACTTTTGTGCCCACGAGATTGAGCTTCCCGCC
ACCATCTGGTGCTACCCGGTTATCGGCTACATGCCCTACAACGATGCCGC
CGTAAGCAAGGCTAAGGAAGACCTGAAGACCGCCTTGGGCGCTCTGGAGA
AGGCTCTGCTGGAGAGGACATACCTGGTTGACTCTTGGATCGACTTTTGT
GCCCACGAGATTGAGCTTCCCGCCACCATCTGGTGCTACCCGGTTATCGG
CTACATGCCCTACAACGATGCCGCCGTAAGCAAGGCTAAGGAAGACCTGA
AGACCGCCTTGGGCGCTCTGGAGAAGGCTCTGCTGGAGAGGACATACCTG
GTTGGAGACAAGATCACCTTGGCGGATATCACCGTGGCGTCGGCGCTGGT
GTATCCCATGAAGCTTGTCATGAGCCCGGAGTACCGCAAGGCGTTCCCTT
GCGTGACTCGGTGGTTCACCACTTGTGTCAATCAGCCGCAGTTCAAGGCC
GTGATCGGGACGGTGGAGCTAGCCAAGGAGGAGATGACTGCGGAAGGAGC
CCCTGCGGCACCTAAGAAGGAAAAGGTTGGAGACAAGATCACCTTGGCGG
ATATCACCGTGGCGTCGGCGCTGGTGTATCCCATGAAGCTTGTCATGAGC
CCGGAGTACCGCAAGGCGTTCCCTTGCGTGACTCGGTGGTTCACCACTTG
TGTCAATCAGCCGCAGTTCAAGGCCGTGATCGGGACGGTGGAGCTAGCCA
AGGAGGAGATGACTGCGGAAGGAGCCCCTGCGGCACCTAAGAAGGAAAAG
AAGCCGCAGCCCGCCAAGAAGGAGAAGAAGAAGAAGGAGGTCAAGAAGGA
GGAGGAGGACGATGGGTCGAGGGACTTGGGGATGCCCGCCCCGGAGAAGA
AGGCCCCCCACCCTCTCGCCGTTATGGACAAGGAGGCGAAGTCGCCGTTC
GCGGGAGACACGTGGAAGAAGGCAAGACGTGACAAGCCGCAGCCCGCCAA
GAAGGAGAAGAAGAAGAAGGAGGTCAAGAAGGAGGAGGAGGACGATGGGT
CGAGGGACTTGGGGATGCCCGCCCCGGAGAAGAAGGCCCCCCACCCTCTC
GCCGTTATGGACAAGGAGGCGAAGTCGCCGTTCGCGGGAGACACGTGGAA
GAAGGCAAGACGTGACATTTACTCCAACAACTCATACGAGGACAGCATGA
AGCAATTCTGGGACATCTTCGACCCCGAGGGGTGGTCCCTCTGGATTTGC
CGGTACAAGTTCAACGCGGAAAACACTCGTTTGTTCATGACGTCGAACTT
GGTTGGCGGGTTCGTCCAGCGCTCTGGCGAGATCAGGAAATGGGCGTTTG
GATTTACTCCAACAACTCATACGAGGACAGCATGAAGCAATTCTGGGACA
TCTTCGACCCCGAGGGGTGGTCCCTCTGGATTTGCCGGTACAAGTTCAAC
GCGGAAAACACTCGTTTGTTCATGACGTCGAACTTGGTTGGCGGGTTCGT
CCAGCGCTCTGGCGAGATCAGGAAATGGGCGTTTGGATGCATGCAGATCA
CCGGCGAGGAGGGAAAAGAGCTACTCGTGTCAGGAGCGTGGCTCATCCGT
GGGCAGAGCATTCAGCCCATGGTAGACGCTAACGACGACGCTAACTGATG
CATGCAGATCACCGGCGAGGAGGGAAAAGAGCTACTCGTGTCAGGAGCGT
GGCTCATCCGTGGGCAGAGCATTCAGCCCATGGTAGACGCTAACGACGAC
GCTAACTGGTATGACTGGACTAAGGTGGCCACCCCCGTGTCTGACGAAGA
CAAGGCGCTGGTGACAGAGATGTGGTGCAGCGAAACCACGGTGGAAGGAA
GGCCCGTCCTTGACGGAAAGGTCTTCAAGTAGGTATGACTGGACTAAGGT
GGCCACCCCCGTGTCTGACGAAGACAAGGCGCTGGTGACAGAGATGTGGT
GCAGCGAAACCACGGTGGAAGGAAGGCCCGTCCTTGACGGAAAGGTCTTC
AAGTAG
back to top