mRNA_L-elsbetiae_contig10462.455.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10462.455.1
Unique NamemRNA_L-elsbetiae_contig10462.455.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10462.455.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 1.970e-41
Identity = 141/269 (52.42%), Postives = 165/269 (61.34%), Query Frame = 2 
Query:  581 LRCTQYQDTVVHMAAAGGLVDIMGAAIERGAGVDAVDMANRTPLHCAAFNNRVETINVLVKSGVNIEARDRFMGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCQLTPLHLAAGNAGKQGAAEMVDLLLRSGADETILNNGGKAAADIVAGYVEEEEQLAEDVNRVHELLANAPADRAWRRRGYLVLCRAHPDRIQQIQDISSAQ-AGIARTTRSSAKMGRTEASGCSVAVEASPADGRTSGDWAVAVARVLVLQEEGIFRMIVGYV 1384
            LR TQ++    H AA  G V+I+ A IE GA VDAVD   RT                                 XXXXXXXXXXXXXXXXXXXXXXXXXXX     LTPL  A   AG+QGAAE+V+ LLR+GADETI N  G  A D++   VEEE++L EDV RV ELLANAPADRAWRRRGYL++CRA PDR+ + +  S      +AR TRS AKM R       +A E S  D  T G+WAV V++V+ LQEEGIFR IV Y+
Sbjct:  138 LRSTQFKCPATHAAALEGHVEILRAIIEHGADVDAVDAQQRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSL-LTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARG----IAGE-STVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
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BLAST of mRNA_L-elsbetiae_contig10462.455.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 7.850e-32
Identity = 118/307 (38.44%), Postives = 145/307 (47.23%), Query Frame = 2 
Query:  503 TPLYLVACYGRVAAALALLAAGADVGLRCTQYQDTVVHMAAAGGLVDIMGAAIERGAGVDAVDMANRTPLHCAAFNNRVETINVLVKSGVNIEARDRFMGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCQLTPLHLAAGNAGKQGAAEMVDLLLRSGADETILNNGGKAAADIVAGYVEEEEQLAEDVNRVHELLANAPADRAWRRRGYLVLCRAH--PDRIQQIQDISSAQA-GIARTTRSSAKMGRTEASGCSVAVEASPADGRTSGDWAVAVARVL-------VLQEEG---IFRMIVGYV 1384
            TPL+LVA  GR AAA ALL AGADV LR      +                    G  V+A      T L  A+  ++   I+VL ++G NIEA+    GS                                 TPLHL A  AG  G AEMVDLLLR GADET ++  G  AAD+V    EE + LAEDV+RV +LLA APADRAWRRRG+L+L RAH    R+Q     S A A G+A+ TRSS +  R E                   DWA  V+ ++        L  +G   IF  IVGY+
Sbjct:  492 TPLHLVAMAGRAAAAQALLDAGADVALRQNGVGLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQAN--GSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEI------------------DWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778
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BLAST of mRNA_L-elsbetiae_contig10462.455.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 8.920e-32
Identity = 100/269 (37.17%), Postives = 144/269 (53.53%), Query Frame = 2 
Query:  428 RGKTEVVELLLLKGAEKDALDSENRTPLYLVACYGRVAAALALLAAGADVGL--RCTQYQDTVVHMAAAGGLVDIMGAAIERGAGVDAVDMANRTP----LHCAAFNNRVETINVLVKSGVNIEARDRFMGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCQLTPLHLAAGNAGKQGAAEMVDLLLRSGADETILNNGGKAAADIVAGYVEEEE--QLAEDVNRVHELLANAPADRAWRRRGYLVLCRAHPDRIQQIQDISSAQAGI 1210
            +G+   V  LL +GA+K+ LD++ RTPL+L    G ++   ALLAA  D  +  R      +V+  AA  G   ++ A ++ G     VD+  RT     LH AA NNRV  I+VLV++G ++E  D    +                             + + TPL +AA  AG+QG   +VD+LLR GADET LN  G+ AA++V  ++E        +D+ RV +LL NAPADRAWRRRG LVLCRA   + ++++  SS+  GI
Sbjct:   97 QGQEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKGDACVLRAILQHG-----VDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGE-TPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGI 359
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BLAST of mRNA_L-elsbetiae_contig10462.455.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 1.950e-31
Identity = 98/264 (37.12%), Postives = 142/264 (53.79%), Query Frame = 2 
Query:  428 RGKTEVVELLLLKGAEKDALDSENRTPLYLVACYGRVAAALALLAAGADVGLRCTQYQDT--VVHMAAAGGLVDIMGAAIERGAGVDAVDMANRTP----LHCAAFNNRVETINVLVKSGVNIEARDRFMGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCQLTPLHLAAGNAGKQGAAEMVDLLLRSGADETILNNGGKAAADIVAGYVEEEE--QLAEDVNRVHELLANAPADRAWRRRGYLVLCRAHPDRIQQIQDISS 1195
            +G+   V  LL  GA+K+ LD++ RTPL+L    G ++   ALLAA  D  +R   +  +  V+ +AA  G   ++ A ++ G     VD+  RT     LH AA NNRV  I+VLV++G ++E  D    +                             + + TPL +AA  AG+QG   +VD+LLR GADET LN  G+ AA++V  ++E        +DV RV +LL NAP DRAWRRRG+LVLCRA   + ++++  SS
Sbjct:   48 QGQEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHG-----VDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGE-TPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASS 305
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BLAST of mRNA_L-elsbetiae_contig10462.455.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 4.070e-28
Identity = 100/228 (43.86%), Postives = 133/228 (58.33%), Query Frame = 2 
Query:  710 LHCAAFNNRVETINVLVKSGVNIEARDRFMGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCQLTPLHLAAGNAGKQGAAEMVDLLLRSGADETILNNGGKAAADIVAGYVE-EEEQLAEDVNRVHELLANAPADRAWRRRGYLVLCRA--HPDRIQQIQDISSAQAGIARTTRSSAKMGRTEASGCSVAVEASPADGRTSGDWAVAVARVLVLQEEGIFRMIVGYV 1384
            LH A   N+V+ + VL+++G +I+       +                XXXXXXXXXXXXX         AA  AG+QG+AE+VDLLLR GADET  +  G+  AD V   +E  +  L  +V  VHELLANAPADRAWRRRG LVLCRA     R++Q +D    + G++R TRS AK+ R++A G          +G T  +W  A  RV+ L+EEGIFR +VG++
Sbjct:  198 LHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQ-EDGGDTRGGLSRRTRSRAKLARSDAVGAGC--RRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
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BLAST of mRNA_L-elsbetiae_contig10462.455.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 9.970e-26
Identity = 95/276 (34.42%), Postives = 123/276 (44.57%), Query Frame = 2 
Query:  569 ADVGLRCTQYQDTVVHMAAAGGLVDIMGAAIERGAGVDAVDMANRTPLHCAAFNNRVETINVLVKSGVNIEARDRFMGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCQL----TPLHLAAGNAGKQGAAEMVDLLLRSGADETILNNGGKAAADIVAGYVEEEEQLAEDVNRVHELLANAPADRAWRRRGYLVLCRAHPDRIQQIQDISSAQAGIARTTRSSAKMGRTEASGCSVAVEASPADGRTSGDWAVAVARVLVLQEEGIFRMIVGYV 1384
            AD+  R    + + + + A  G VD +   IE GA VDA +      LH A  NN+VE ++VL+++G N  AR                                     Q     + L   A  AGKQG  E+VDLLLR GADET +   G  AAD +   V EE+++ E+   V +LLANAPADRAWRRR  LVLCRA PD++Q   D                ++ R E                         ARVL L EEGIFR IV ++
Sbjct:  150 ADINRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAMDVLLRAGAN--ARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSD----------------RIARLE-------------------------ARVLGLVEEGIFRTIVRFI 382
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BLAST of mRNA_L-elsbetiae_contig10462.455.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.000e-22
Identity = 75/154 (48.70%), Postives = 97/154 (62.99%), Query Frame = 2 
Query:  929 NAGKQGAAEMVDLLLRSGADETILNNGGKAAADIVAGYVEEEEQLAEDVNRVHELLANAPADRAWRRRGYLVLCRAHPDRIQQIQDISSAQAG-IARTTRSSAKM-GRTEASGCSVAVEASPADGRTSGDWAVAVARVLVLQEEGIFRMIVGYV 1384
            +AG +GA E+VDLLLR  ADET  +  G    +IV     E + +  +V RV +LL  AP DRAWRRRG LVLCRAHP+R+   Q+ S  Q   + R TRS  K+  R + +G S   E + ADGRT+ +W+  V RVL L +EGIFR IVGY+
Sbjct:  249 SAGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSG--EGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399
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BLAST of mRNA_L-elsbetiae_contig10462.455.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 1.260e-22
Identity = 106/192 (55.21%), Postives = 119/192 (61.98%), Query Frame = 2 
Query:  647 MGAAIERGAGVDAVDMANRTPLHCAAFNNRVETINVLVKSGVNIEARDRFMGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCQLTPLHLAAGNAGKQGAAEMVDLLLRSGADETILNNGGKAAADIVAGYVEEEEQLAEDVNRVHELLANAPADRAWRRRGYLVLCRAHPDRIQQIQDISSAQAGIARTT 1222
            M AAIERGA VDA D   RTP H AA  N VE I+VLV               XXXXXXXXXXXXXXXXXXXXXXXXXXXXX         A   AG +G  E+VD LLRSGADETIL++ G+AA D+++  V       E  +RV +LL NA ADRAW RR YLVLCR HPDR         A +G+AR T
Sbjct:    1 MSAAIERGAEVDAADAVERTPPHHAALLNNVEEIDVLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RSATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTHPDR---------ADSGVARAT 182
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BLAST of mRNA_L-elsbetiae_contig10462.455.1 vs. uniprot
Match: A0A6H5KFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 3.010e-20
Identity = 103/354 (29.10%), Postives = 147/354 (41.53%), Query Frame = 2 
Query:  389 GYEWEYSSPHCC*RGKTEVVELLLLKGAEKDALDSENRTPLYLVACYGRVAAALALLAAGADVGLRCTQYQDTVVHMAAAGGLVDIMGAAIERGAGVDAVDMANRTPLHCAAFNNRVETINVLVKSGVNIEARDRFMGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCQLTPLHLAAGNAGKQGAAEMVDLLLRSGADETILNNGGKAAADIVAGYVEEEEQLAED-VNRVHELLANAPADRAWRRRGYLVLCRAHPDRIQQIQDISSAQAGIARTT----RSSAKMGRTEA-----------------SGCSVAVEASPADGRTSGDWAVAVARVLVLQEEGIFRMIVGYV 1384
            G+E  +        G  EVV  L  KG +   + +   T L L      VA   ALLA GADV    T+    + H+AA       M A  + G  ++      RTPL  AAF    E +  L++ G N+ +++   G                                 L+PL  A     ++G  +  DLLLR GADET +++  K    ++   +      +   + RV ELLA AP DRAWRRRG+LV C +HPDR+Q   +I  A       T    R  A+ G+ E                  SG     E S  +G T G +    A ++ L EE +FR I+G++
Sbjct:   22 GFEGWFPIHFAAHHGLDEVVVSLFHKGIDPTCVTTREETHLLLAVKRNHVAIINALLAEGADVNFLTTRRPVPLAHIAALHNNAAAMPALFKAGVYIEGRSPKGRTPLQNAAFCGSCEAMLALLQLGANVNSKNTING---------------------------------LSPLCSAC----REGHHDAADLLLRWGADETAVDSDEKTIVSMMTHRIFRAAVASRQRLERVSELLARAPQDRAWRRRGFLVPCLSHPDRVQLAVEIPEAATEAIEQTQERPRRHARTGQVEVKVEMDGTNXXXXXXXXKSGAREGTE-SMREG-TDGGFNGLSAWMIALTEEHLFRKIMGFL 336
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BLAST of mRNA_L-elsbetiae_contig10462.455.1 vs. uniprot
Match: A0A6H5JFR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR1_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.030e-19
Identity = 101/287 (35.19%), Postives = 134/287 (46.69%), Query Frame = 2 
Query:  431 GKTEVVELLLLKGAEKDALDSENRTPLYLVA---------CYGRVAAALALLAAGADVGLRCTQYQDTVVHMAAAGGLVDIMGAAIERGAGVDAVDMANRTPLHCAAFNNRVETINVLVKSGVNIEARDRFMGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCQLTPLHLAAGNAGKQGAAEMVDLLLRSGADETILNNGGKAAADIVAG------YVEEEEQLAEDVNRVHELLANAPADRAWRRRGYLVLCRAHPDRIQQIQDISSAQAGIARTTRSSAKMGR 1246
            G  EVV  LL  GA     D+   TPL + A          +G + +A AL+AAGA++ +RC   + TV+ +AA  G VDI+ A ++ GA V AVD      LH                              XXXXXXXXXX                           +A     ++ +A +VDLLLR GA ETI++   K AA ++        Y         D  RV++LL NAPADRAWRRRG+L+LCRA+P+R+    D SS     ARTT + AK+ R
Sbjct:   12 GYAEVVTNLLEHGACVSIKDARGSTPLQVAAECTPLFGALLFGHLTSARALMAAGAEINVRCGLSKRTVLSLAAEKGDVDILRALVKNGADVTAVDNDRDMALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAV-----------------------VALSKRARRTSA-VVDLLLRLGAHETIVDKRKKNAAGLLKKSWWSCLY-------PGDAERVYKLLRNAPADRAWRRRGFLLLCRAYPERVPPRLDSSSTLVDAARTTHNEAKVPR 267
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10462.455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXK5_9PHAE1.970e-4152.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHY9_9PHAE7.850e-3238.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNU3_9PHAE8.920e-3237.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6X8_ECTSI1.950e-3137.12Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FYD0_ECTSI4.070e-2843.86Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7FKL4_ECTSI9.970e-2634.42Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7G981_ECTSI1.000e-2248.70Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5JMJ6_9PHAE1.260e-2255.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFY7_9PHAE3.010e-2029.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFR1_9PHAE1.030e-1935.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10462contigL-elsbetiae_contig10462:361..2143 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score130.2
Seed ortholog evalue1.4e-27
Seed eggNOG ortholog2880.D7FYD0
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons1
Model size1783
Cds size771
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10462.455.1prot_L-elsbetiae_contig10462.455.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10462 977..1747 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815270.4329803-UTR-L-elsbetiae_contig10462:360..9761622815270.4329803-UTR-L-elsbetiae_contig10462:360..976Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10462 361..976 +
1691682808.2207963-UTR-L-elsbetiae_contig10462:360..9761691682808.2207963-UTR-L-elsbetiae_contig10462:360..976Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10462 361..976 +
1622815270.4522479-UTR-L-elsbetiae_contig10462:1747..21431622815270.4522479-UTR-L-elsbetiae_contig10462:1747..2143Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10462 1748..2143 +
1691682808.2444522-UTR-L-elsbetiae_contig10462:1747..21431691682808.2444522-UTR-L-elsbetiae_contig10462:1747..2143Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10462 1748..2143 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815270.4429648-CDS-L-elsbetiae_contig10462:976..17471622815270.4429648-CDS-L-elsbetiae_contig10462:976..1747Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10462 977..1747 +
1691682808.2333949-CDS-L-elsbetiae_contig10462:976..17471691682808.2333949-CDS-L-elsbetiae_contig10462:976..1747Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10462 977..1747 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10462.455.1

>prot_L-elsbetiae_contig10462.455.1 ID=prot_L-elsbetiae_contig10462.455.1|Name=mRNA_L-elsbetiae_contig10462.455.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=257bp
MAAAGGLVDIMGAAIERGAGVDAVDMANRTPLHCAAFNNRVETINVLVKS
GVNIEARDRFMGSTPLHDAVQESRLEAVLALLKHDADVNAHDKCQLTPLH
LAAGNAGKQGAAEMVDLLLRSGADETILNNGGKAAADIVAGYVEEEEQLA
EDVNRVHELLANAPADRAWRRRGYLVLCRAHPDRIQQIQDISSAQAGIAR
TTRSSAKMGRTEASGCSVAVEASPADGRTSGDWAVAVARVLVLQEEGIFR
MIVGYV*
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mRNA from alignment at L-elsbetiae_contig10462:361..2143+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10462.455.1 ID=mRNA_L-elsbetiae_contig10462.455.1|Name=mRNA_L-elsbetiae_contig10462.455.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1783bp|location=Sequence derived from alignment at L-elsbetiae_contig10462:361..2143+ (Laminarionema elsbetiae ELsaHSoW15)
CCAGCGAGACAGAGCATCGCACAGAGGGAGGGGACCCACACAAACATTTG
AAGCAGCCTTCTCTACATACTCTGCCCCATCAAGGTAGCCAGAGAGGCAG
CATCATGGCAGATCCGATGGCCAACAGAGATGCACGAGAAGCGCTTCGAG
GAGCAGAGGAGCAGACCTTCGACCTCCTTGCCCAAGTCTTGACATCAACA
TCAAAACAGTGGGCGGAGTTGCTGAGAGCTCCACTGGAGCGAGCCGCGGT
CACGGGCAACAGAGGCCTCGCACAGAAGCTGGTGGGGGCAGGGGCAGAGG
TTGGGGATGCACTTCATGCAGCCACTCGAGGCGGCCATGGAGACGTGGTG
AACGATCTGCTGGAGAATGGAGCCTCTGTCGCCTCCAAGGATACGAATGG
GAGTACTCCTCTCCACATTGCTGCTGAAGAGGGAAAACGGAGGTGGTAGA
GTTGTTGTTGCTCAAGGGGGCGGAGAAAGACGCGCTGGATAGCGAAAACC
GTACACCACTTTATCTGGTCGCCTGTTATGGTCGCGTGGCTGCAGCACTA
GCTCTCCTGGCTGCCGGCGCCGACGTCGGCCTTCGGTGCACCCAATACCA
GGACACGGTAGTGCACATGGCGGCTGCAGGTGGGCTTGTTGACATCATGG
GGGCGGCGATCGAGCGCGGGGCAGGTGTGGACGCTGTTGACATGGCCAAT
AGGACACCCCTGCATTGCGCCGCATTTAACAACAGGGTGGAGACGATCAA
TGTGCTCGTGAAGTCTGGGGTCAACATCGAAGCACGGGATAGATTCATGG
GCAGTACACCTCTTCACGATGCCGTCCAAGAGTCCAGGCTCGAAGCCGTC
CTGGCCCTCTTGAAGCATGACGCGGATGTCAACGCCCACGACAAATGCCA
ACTAACGCCGTTGCACTTGGCCGCAGGCAATGCCGGCAAGCAAGGAGCCG
CGGAGATGGTGGACCTGTTGCTGAGGTCAGGTGCGGACGAAACCATCCTT
AACAACGGAGGCAAAGCGGCCGCGGACATTGTGGCGGGATATGTCGAAGA
AGAGGAACAGCTCGCCGAGGACGTCAACCGCGTGCATGAGCTGTTGGCGA
ACGCTCCGGCCGATAGAGCATGGCGTCGCCGGGGCTACTTGGTGTTGTGC
CGCGCTCACCCCGACAGAATTCAGCAGATCCAGGACATCAGCAGCGCGCA
GGCCGGCATTGCGCGGACAACTCGCAGCAGTGCTAAGATGGGAAGGACGG
AGGCGAGTGGCTGCAGTGTGGCCGTCGAAGCTAGCCCAGCGGATGGGCGG
ACTAGTGGTGACTGGGCCGTTGCAGTGGCGAGGGTGCTGGTGCTGCAAGA
GGAAGGCATATTCCGGATGATCGTGGGGTATGTGTGAATGTGGTGAGTTG
GAGAGCTGCCATCATCCCATCTGATGACGTAGATGTGTGCGTATCGGCTT
AAAATCGCAGAAGAATTGTTGCATATTCGTGAGCAAGATCACTCGCCCAC
CAGCTCAAAGCCATTATCCACAACCCCAATCCAGCCCCAATATGCAATGA
ACGAATAGACGCACCATATTTCATCTGATGCGGCATTCGCTATTCTCTGT
CGACTGTTGGCGCTTCTCTCTGGGGGCTAGACTTGTTCACGATCTAGACC
TCCGCCTCACCCCTCGGCGATGAAAGCAGCAAACCTTTATTGCCAGAGAG
AATGTGCAAATGCGCCCCTGTTGTAGTGTGCCCACACTCTGTTGTATGAG
GGGGGGTTGCGATTGACCGAAATTAAACTATAT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10462:361..2143+

>mRNA_L-elsbetiae_contig10462.455.1 ID=mRNA_L-elsbetiae_contig10462.455.1|Name=mRNA_L-elsbetiae_contig10462.455.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1542bp|location=Sequence derived from alignment at L-elsbetiae_contig10462:361..2143+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGCTGCAGGTGGGCTTGTTGACATCATGGGGGCGGCGATCGAGCG
CGGGGCAGGTGTGGACGCTGTTGACATGGCCAATAGGACACCCCTGCATT
GCGCCGCATTTAACAACAGGGTGGAGACGATCAATGTGCTCGTGAAGTCT
GGGGTCAACATCGAAGCACGGGATAGATTCATGGGCAGTACACCTCTTCA
CGATGCCGTCCAAGAGTCCAGGCTCGAAGCCGTCCTGGCCCTCTTGAAGC
ATGACGCGGATGTCAACGCCCACGACAAATGCCAACTAACGCCGTTGCAC
TTGGCCGCAGGCAATGCCGGCAAGCAAGGAGCCGCGGAGATGGTGGACCT
GTTGCTGAGGTCAGGTGCGGACGAAACCATCCTTAACAACGGAGGCAAAG
CGGCCGCGGACATTGTGGCGGGATATGTCGAAGAAGAGGAACAGCTCGCC
GAGGACGTCAACCGCGTGCATGAGCTGTTGGCGAACGCTCCGGCCGATAG
AGCATGGCGTCGCCGGGGCTACTTGGTGTTGTGCCGCGCTCACCCCGACA
GAATTCAGCAGATCCAGGACATCAGCAGCGCGCAGGCCGGCATTGCGCGG
ACAACTCGCAGCAGTGCTAAGATGGGAAGGACGGAGGCGAGTGGCTGCAG
TGTGGCCGTCGAAGCTAGCCCAGCGGATGGGCGGACTAGTGGTGACTGGG
CCGTTGCAGTGGCGAGGGTGCTGGTGCTGCAAGAGGAAGGCATATTCCGG
ATGATCGTGGGGTATGTGTGAATGGCGGCTGCAGGTGGGCTTGTTGACAT
CATGGGGGCGGCGATCGAGCGCGGGGCAGGTGTGGACGCTGTTGACATGG
CCAATAGGACACCCCTGCATTGCGCCGCATTTAACAACAGGGTGGAGACG
ATCAATGTGCTCGTGAAGTCTGGGGTCAACATCGAAGCACGGGATAGATT
CATGGGCAGTACACCTCTTCACGATGCCGTCCAAGAGTCCAGGCTCGAAG
CCGTCCTGGCCCTCTTGAAGCATGACGCGGATGTCAACGCCCACGACAAA
TGCCAACTAACGCCGTTGCACTTGGCCGCAGGCAATGCCGGCAAGCAAGG
AGCCGCGGAGATGGTGGACCTGTTGCTGAGGTCAGGTGCGGACGAAACCA
TCCTTAACAACGGAGGCAAAGCGGCCGCGGACATTGTGGCGGGATATGTC
GAAGAAGAGGAACAGCTCGCCGAGGACGTCAACCGCGTGCATGAGCTGTT
GGCGAACGCTCCGGCCGATAGAGCATGGCGTCGCCGGGGCTACTTGGTGT
TGTGCCGCGCTCACCCCGACAGAATTCAGCAGATCCAGGACATCAGCAGC
GCGCAGGCCGGCATTGCGCGGACAACTCGCAGCAGTGCTAAGATGGGAAG
GACGGAGGCGAGTGGCTGCAGTGTGGCCGTCGAAGCTAGCCCAGCGGATG
GGCGGACTAGTGGTGACTGGGCCGTTGCAGTGGCGAGGGTGCTGGTGCTG
CAAGAGGAAGGCATATTCCGGATGATCGTGGGGTATGTGTGA
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