mRNA_L-elsbetiae_contig1045.446.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1045.446.1
Unique NamemRNA_L-elsbetiae_contig1045.446.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1045.446.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1045contigL-elsbetiae_contig1045:3173..3963 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size792
Cds size789
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815269.4598696-CDS-L-elsbetiae_contig1045:3172..39611622815269.4598696-CDS-L-elsbetiae_contig1045:3172..3961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1045 3173..3961 +
1691682807.5842197-CDS-L-elsbetiae_contig1045:3172..39611691682807.5842197-CDS-L-elsbetiae_contig1045:3172..3961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1045 3173..3961 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1045.446.1prot_L-elsbetiae_contig1045.446.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1045 3173..3961 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1045.446.1

>prot_L-elsbetiae_contig1045.446.1 ID=prot_L-elsbetiae_contig1045.446.1|Name=mRNA_L-elsbetiae_contig1045.446.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=263bp
ERGGIAPGATGPPVVLLPGAAPAATGSFAEEEERDEDRVLLQSTGPPGVL
LIAEPAAAEGPSKDEEGVAARAMEEAEEGGAPGNDESFPAGHAAATAAAV
AAAAAAAAAAAAAAGLRGTDVAMPTSGSDAAPVAGGRDAALLDEPGASDA
EGGGGGGIGPSPEVQEEPAVGSGAGGDRAEEPSAAETAAVGGGDRGHGTR
TRTGRDESERATEDSGDGAARARAPGGVGVGRCAEAGAVLPGEGSVGGAG
DAAVGGERPAETG
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mRNA from alignment at L-elsbetiae_contig1045:3173..3963+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1045.446.1 ID=mRNA_L-elsbetiae_contig1045.446.1|Name=mRNA_L-elsbetiae_contig1045.446.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=791bp|location=Sequence derived from alignment at L-elsbetiae_contig1045:3173..3963+ (Laminarionema elsbetiae ELsaHSoW15)
GAAAGGGGAGGTATCGCGCCCGGAGCCACGGGGCCACCTGTGGTGTTGTT
GCCTGGTGCAGCGCCCGCGGCAACGGGATCGTTCGCCGAGGAAGAAGAGC
GCGACGAGGACAGGGTGCTGCTTCAATCCACGGGGCCACCGGGAGTCTTG
CTCATCGCAGAACCTGCGGCGGCGGAGGGACCGTCCAAAGACGAGGAAGG
CGTTGCAGCCAGGGCGATGGAGGAAGCCGAGGAGGGAGGCGCGCCGGGAA
ACGACGAATCGTTTCCGGCAGGCCATGCAGCAGCGACGGCGGCGGCGGTG
GCGGCGGCAGCAGCGGCAGCGGCGGCAGCGGCAGCGGCGGCAGGGCTTCG
GGGCACCGATGTTGCGATGCCGACCTCTGGTTCCGATGCCGCCCCGGTGG
CCGGGGGCAGAGACGCTGCCCTGCTTGACGAACCCGGGGCCTCAGACGCG
GAGGGCGGGGGTGGTGGTGGTATCGGACCTTCCCCTGAGGTACAGGAGGA
ACCGGCCGTGGGCTCCGGAGCCGGGGGCGACCGGGCCGAAGAGCCAAGCG
CTGCAGAGACAGCCGCGGTCGGCGGAGGCGACCGCGGGCACGGCACGCGG
ACGCGGACGGGCCGAGACGAAAGCGAGCGGGCGACGGAGGACTCCGGAGA
CGGAGCTGCGCGGGCGCGGGCCCCGGGCGGTGTGGGTGTTGGCCGCTGCG
CCGAGGCGGGAGCGGTGTTGCCGGGCGAAGGAAGCGTAGGAGGAGCAGGA
GACGCGGCGGTGGGCGGTGAGAGGCCAGCTGAAACCGGAGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1045:3173..3963+

>mRNA_L-elsbetiae_contig1045.446.1 ID=mRNA_L-elsbetiae_contig1045.446.1|Name=mRNA_L-elsbetiae_contig1045.446.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1578bp|location=Sequence derived from alignment at L-elsbetiae_contig1045:3173..3963+ (Laminarionema elsbetiae ELsaHSoW15)
GAAAGGGGAGGTATCGCGCCCGGAGCCACGGGGCCACCTGTGGTGTTGTT
GCCTGGTGCAGCGCCCGCGGCAACGGGATCGTTCGCCGAGGAAGAAGAGC
GCGACGAGGACAGGGTGCTGCTTCAATCCACGGGGCCACCGGGAGTCTTG
CTCATCGCAGAACCTGCGGCGGCGGAGGGACCGTCCAAAGACGAGGAAGG
CGTTGCAGCCAGGGCGATGGAGGAAGCCGAGGAGGGAGGCGCGCCGGGAA
ACGACGAATCGTTTCCGGCAGGCCATGCAGCAGCGACGGCGGCGGCGGTG
GCGGCGGCAGCAGCGGCAGCGGCGGCAGCGGCAGCGGCGGCAGGGCTTCG
GGGCACCGATGTTGCGATGCCGACCTCTGGTTCCGATGCCGCCCCGGTGG
CCGGGGGCAGAGACGCTGCCCTGCTTGACGAACCCGGGGCCTCAGACGCG
GAGGGCGGGGGTGGTGGTGGTATCGGACCTTCCCCTGAGGTACAGGAGGA
ACCGGCCGTGGGCTCCGGAGCCGGGGGCGACCGGGCCGAAGAGCCAAGCG
CTGCAGAGACAGCCGCGGTCGGCGGAGGCGACCGCGGGCACGGCACGCGG
ACGCGGACGGGCCGAGACGAAAGCGAGCGGGCGACGGAGGACTCCGGAGA
CGGAGCTGCGCGGGCGCGGGCCCCGGGCGGTGTGGGTGTTGGCCGCTGCG
CCGAGGCGGGAGCGGTGTTGCCGGGCGAAGGAAGCGTAGGAGGAGCAGGA
GACGCGGCGGTGGGCGGTGAGAGGCCAGCTGAAACCGGAGAAAGGGGAGG
TATCGCGCCCGGAGCCACGGGGCCACCTGTGGTGTTGTTGCCTGGTGCAG
CGCCCGCGGCAACGGGATCGTTCGCCGAGGAAGAAGAGCGCGACGAGGAC
AGGGTGCTGCTTCAATCCACGGGGCCACCGGGAGTCTTGCTCATCGCAGA
ACCTGCGGCGGCGGAGGGACCGTCCAAAGACGAGGAAGGCGTTGCAGCCA
GGGCGATGGAGGAAGCCGAGGAGGGAGGCGCGCCGGGAAACGACGAATCG
TTTCCGGCAGGCCATGCAGCAGCGACGGCGGCGGCGGTGGCGGCGGCAGC
AGCGGCAGCGGCGGCAGCGGCAGCGGCGGCAGGGCTTCGGGGCACCGATG
TTGCGATGCCGACCTCTGGTTCCGATGCCGCCCCGGTGGCCGGGGGCAGA
GACGCTGCCCTGCTTGACGAACCCGGGGCCTCAGACGCGGAGGGCGGGGG
TGGTGGTGGTATCGGACCTTCCCCTGAGGTACAGGAGGAACCGGCCGTGG
GCTCCGGAGCCGGGGGCGACCGGGCCGAAGAGCCAAGCGCTGCAGAGACA
GCCGCGGTCGGCGGAGGCGACCGCGGGCACGGCACGCGGACGCGGACGGG
CCGAGACGAAAGCGAGCGGGCGACGGAGGACTCCGGAGACGGAGCTGCGC
GGGCGCGGGCCCCGGGCGGTGTGGGTGTTGGCCGCTGCGCCGAGGCGGGA
GCGGTGTTGCCGGGCGAAGGAAGCGTAGGAGGAGCAGGAGACGCGGCGGT
GGGCGGTGAGAGGCCAGCTGAAACCGGA
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