mRNA_L-elsbetiae_contig10446.440.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10446.440.1 vs. uniprot
Match: D8LFA1_ECTSI (BIG2, ArfGEF protein of the BIG/GBF family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFA1_ECTSI) HSP 1 Score: 179 bits (454), Expect = 1.370e-47 Identity = 101/142 (71.13%), Postives = 107/142 (75.35%), Query Frame = 1 Query: 1 MSRYYRVVELAMESKSEDVVEAALGQLHKLVAGGLVRGNTVTTLKDGSSANLGEILVGVVLSTGSRDKTVRRGGRAQAVRCLLSCVSSTEIQVHGDELRSVFSFVHETFLTIDSTANRAKYNKAQARATLDHILQITFSRLE 426 M+RYYRVVELAM SKSEDVVEAALGQLHKL+AGGLVR NT+TTLKDGSSANLGEILVGVV+ TGSRDKTV HG+ELR V FVHETFL IDSTANRA+YNKAQARATLDHILQ R E Sbjct: 81 MARYYRVVELAMGSKSEDVVEAALGQLHKLIAGGLVRRNTMTTLKDGSSANLGEILVGVVMETGSRDKTV-----------------------HGEELRKVALFVHETFLVIDSTANRARYNKAQARATLDHILQEEPERSE 199
BLAST of mRNA_L-elsbetiae_contig10446.440.1 vs. uniprot
Match: A0A6H5KHB1_9PHAE (Sec7_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB1_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 9.410e-14 Identity = 86/133 (64.66%), Postives = 101/133 (75.94%), Query Frame = 1 Query: 406 ITFSRLEMESPPSSVHGRR----TPSPTKKRRSSAIEALLSPGKGAGMSPTAAXXXXXXXXXXXXXXXXXXXXXXXXVGLQSSNS--SSLGGVLPGMLEALAVEQQQQQRPENGNGEQG----RLDDVSLAGG 774 +TFSRLEMESPP S+HG + +PSP KKRR+SAIEALLSP + + +SP AXXXXXXXXXXXXXXXXXXXXXXXXVG S+ + LGGVLPG+LE LA E + Q+ PE G +G RLD+VSLAGG Sbjct: 1 MTFSRLEMESPPPSIHGGQGQHASPSP-KKRRTSAIEALLSPARRSELSP--AXXXXXXXXXXXXXXXXXXXXXXXXVGGDGSDDPRNRLGGVLPGVLEVLAGEDEGQEEPEQSEGGEGGERARLDEVSLAGG 130
BLAST of mRNA_L-elsbetiae_contig10446.440.1 vs. uniprot
Match: K1PST9_CRAGI (Brefeldin A-inhibited guanine nucleotide-exchange protein 1 n=9 Tax=Crassostrea TaxID=6564 RepID=K1PST9_CRAGI) HSP 1 Score: 58.2 bits (139), Expect = 5.900e-6 Identity = 49/182 (26.92%), Postives = 86/182 (47.25%), Query Frame = 1 Query: 7 RYYRVVELAMESKSEDVVEAALGQLHKLVAGGLVRGNTVTTLKDGSSANLGEILVGVVLSTGS---RDKTVRRGGRAQAVRCLLSCVSSTEIQVHGDELRSVFSFVHETFLTIDSTANRAKYNKAQARATLDHILQITFSRLEMESPPSSVHGRRTPSPTKKRRSSAI----EALLSPGKGA 531 +Y+ ELA +SK +V AL L KL+A G + GNT S G++L+ ++ T G + Q ++ LL+ V+S ++H + + +L A+R N+ A+ATL +L + FSR+E+++ + R+ S + ++ + I E PG+GA Sbjct: 110 KYFLPFELACQSKCARIVNIALDCLQKLIAYGHLTGNTE------DSTTPGKLLIDRIVETICGCFHGPQTDDGVQLQIIKALLTVVTSNTCEIHEGTVLQTVRTCYNIYL-----ASRNLVNQTTAKATLTQMLNVIFSRMEVQAAQETKERERSDSKSSRKEDAGIDVEEERQDGPGQGA 280
BLAST of mRNA_L-elsbetiae_contig10446.440.1 vs. uniprot
Match: A0A8B6H8Y8_MYTGA (Brefeldin A-inhibited guanine nucleotide-exchange protein n=2 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6H8Y8_MYTGA) HSP 1 Score: 56.6 bits (135), Expect = 1.640e-5 Identity = 41/142 (28.87%), Postives = 71/142 (50.00%), Query Frame = 1 Query: 7 RYYRVVELAMESKSEDVVEAALGQLHKLVAGGLVRGNTVTTLKDGSSANLGEILVGVVLSTGSRDKTVRRGGRAQAVRCLLSCVSSTEIQVHGDELRSVFSFVHETFLTIDSTANRAKYNKAQARATLDHILQITFSRLEME 432 +Y+ ELA +SK +V AL L KL+A G + GN V T G L + +V + +T G + Q ++ LL+ V+S +++H + + +L A++ N+ A+ATL +L + FSR+E++ Sbjct: 73 KYFLPFELACQSKCFRIVNVALDCLQKLIAYGHLTGNAVDTTSPGK--RLIDRIVETICGCFHGPQT-DEGVQLQIIKALLTVVTSNTVEIHEGTVLQTVRTCYNIYL-----ASKNLVNQTTAKATLTQMLNVIFSRMELQ 206
BLAST of mRNA_L-elsbetiae_contig10446.440.1 vs. uniprot
Match: A0A8B6C5S9_MYTGA (Brefeldin A-inhibited guanine nucleotide-exchange protein n=5 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6C5S9_MYTGA) HSP 1 Score: 56.6 bits (135), Expect = 1.910e-5 Identity = 41/142 (28.87%), Postives = 71/142 (50.00%), Query Frame = 1 Query: 7 RYYRVVELAMESKSEDVVEAALGQLHKLVAGGLVRGNTVTTLKDGSSANLGEILVGVVLSTGSRDKTVRRGGRAQAVRCLLSCVSSTEIQVHGDELRSVFSFVHETFLTIDSTANRAKYNKAQARATLDHILQITFSRLEME 432 +Y+ ELA +SK +V AL L KL+A G + GN V T G L + +V + +T G + Q ++ LL+ V+S +++H + + +L A++ N+ A+ATL +L + FSR+E++ Sbjct: 73 KYFLPFELACQSKCFRIVNVALDCLQKLIAYGHLTGNAVDTTSPGK--RLIDRIVETICGCFHGPQT-DEGVQLQIIKALLTVVTSNTVEIHEGTVLQTVRTCYNIYL-----ASKNLVNQTTAKATLTQMLNVIFSRMELQ 206
BLAST of mRNA_L-elsbetiae_contig10446.440.1 vs. uniprot
Match: J9K572_ACYPI (SEC7 domain-containing protein n=13 Tax=Aphididae TaxID=27482 RepID=J9K572_ACYPI) HSP 1 Score: 56.2 bits (134), Expect = 2.530e-5 Identity = 43/145 (29.66%), Postives = 71/145 (48.97%), Query Frame = 1 Query: 7 RYYRVVELAMESKSEDVVEAALGQLHKLVAGGLVRGNTVTTLKDGSSANLGEILVGVVLSTGSRDKT---VRRGGRAQAVRCLLSCVSSTEIQVHGDELRSVFSFVHETFLTIDSTANRAKYNKAQARATLDHILQITFSRLEME 432 +Y+R ELA +SKS +V +L L KL+A G + GN + G+ L+ ++ T T G Q ++ LL+ V+S ++VH + + +L A+R N+ ARATL +L + F+R+EM+ Sbjct: 65 KYFRPFELACQSKSPRIVVTSLDCLQKLIAYGHLTGNCTN--------DTGKPLIDKIVETICDCFTGCQTDEGILLQIIKALLTVVTSQHVEVHEATILKAVKTCYNIYL-----ASRNLVNQTTARATLTQMLNVIFTRMEMQ 196
BLAST of mRNA_L-elsbetiae_contig10446.440.1 vs. uniprot
Match: A0A6J8AIA3_MYTCO (ARFGEF n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8AIA3_MYTCO) HSP 1 Score: 55.8 bits (133), Expect = 2.880e-5 Identity = 40/142 (28.17%), Postives = 71/142 (50.00%), Query Frame = 1 Query: 7 RYYRVVELAMESKSEDVVEAALGQLHKLVAGGLVRGNTVTTLKDGSSANLGEILVGVVLSTGSRDKTVRRGGRAQAVRCLLSCVSSTEIQVHGDELRSVFSFVHETFLTIDSTANRAKYNKAQARATLDHILQITFSRLEME 432 +Y+ ELA +SK +V AL L KL+A G + GN + T G L + +V + +T G + Q ++ LL+ V+S +++H + + +L A++ N+ A+ATL +L + FSR+E++ Sbjct: 73 KYFLPFELACQSKCFRIVNVALDCLQKLIAYGHLTGNAIDTTTPGK--RLIDRIVETICGCFHGPQT-DEGVQLQIIKALLTVVTSNTVEIHEGTVLQTVRTCYNIYL-----ASKNLVNQTTAKATLTQMLNVIFSRMELQ 206
BLAST of mRNA_L-elsbetiae_contig10446.440.1 vs. uniprot
Match: A0A2K1JUG3_PHYPA (SEC7 domain-containing protein n=6 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JUG3_PHYPA) HSP 1 Score: 54.7 bits (130), Expect = 8.210e-5 Identity = 44/135 (32.59%), Postives = 66/135 (48.89%), Query Frame = 1 Query: 31 AMESKSEDVVEAALGQLHKLVAGGLVRGNTVTTLKDGSSANLGEILVGVVLSTGSRDKTVRRGGRAQAVRCLLSCVSSTEIQVHGDELRSVFSFVHETFLTIDSTANRAKYNKAQARATLDHILQITFSRLEMES 435 A E+ VVE AL L KL+A G +RG+ T D L E++ GV + G ++ LLS V+ST +QVHGD L + +L +++ N+ A+A+L +L I F R+E +S Sbjct: 87 ACETGYPRVVEPALDCLQKLIAHGHLRGDMDTLTPDNKL--LLEVMEGVCKCYDMAED----GIELLVMKTLLSAVTSTSLQVHGDSLLKAVRTCYNIYL-----GSKSPVNQTTAKASLTQMLVIVFQRMEADS 210 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10446.440.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10446.440.1 >prot_L-elsbetiae_contig10446.440.1 ID=prot_L-elsbetiae_contig10446.440.1|Name=mRNA_L-elsbetiae_contig10446.440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=259bp MSRYYRVVELAMESKSEDVVEAALGQLHKLVAGGLVRGNTVTTLKDGSSAback to top mRNA from alignment at L-elsbetiae_contig10446:1664..3770- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10446.440.1 ID=mRNA_L-elsbetiae_contig10446.440.1|Name=mRNA_L-elsbetiae_contig10446.440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2107bp|location=Sequence derived from alignment at L-elsbetiae_contig10446:1664..3770- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10446:1664..3770- >mRNA_L-elsbetiae_contig10446.440.1 ID=mRNA_L-elsbetiae_contig10446.440.1|Name=mRNA_L-elsbetiae_contig10446.440.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1554bp|location=Sequence derived from alignment at L-elsbetiae_contig10446:1664..3770- (Laminarionema elsbetiae ELsaHSoW15)back to top |