mRNA_L-elsbetiae_contig10287.329.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10287.329.1
Unique NamemRNA_L-elsbetiae_contig10287.329.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10287.329.1 vs. uniprot
Match: A0A6H5K5N4_9PHAE (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K5N4_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 2.730e-96
Identity = 144/170 (84.71%), Postives = 155/170 (91.18%), Query Frame = 1 
Query:    1 KKVDGMVSCLASRSGTKSDSFAIDYQATLNCLEAAKKQGTNHFVMLSAFCVKKPTLQFQKAKLKFENKLVEAGDAGEIGYSIVRPTAFFKSVSGQLEVVQGGAPFVVFGDGTMCKCNPIAEADLATYLVDCITDKTKTNKILNIGGPDDGLTMTAQGNLVRQTLCGAPRV 510
            +K+D +VSCLASRSGTKSDSFAIDYQATLNCLE AKK+G  HFVMLSAFCVKKP LQFQKAKLKFE KLVEAG+AGEIGYSIVRPTAFFKSVSGQLEVVQGGAPFVVFGDGTMCKCNPIAEADLATYLVDCITDK+K N I NIGGPDDGLTMTAQG L+ + +   P++
Sbjct:  118 RKIDALVSCLASRSGTKSDSFAIDYQATLNCLETAKKEGAAHFVMLSAFCVKKPILQFQKAKLKFEEKLVEAGNAGEIGYSIVRPTAFFKSVSGQLEVVQGGAPFVVFGDGTMCKCNPIAEADLATYLVDCITDKSKNNNIFNIGGPDDGLTMTAQGKLLFEAVGKEPKI 287
[Close]
BLAST of mRNA_L-elsbetiae_contig10287.329.1 vs. uniprot
Match: A0A835ZBC9_9STRA (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBC9_9STRA)

HSP 1 Score: 229 bits (585), Expect = 2.200e-72
Identity = 113/168 (67.26%), Postives = 135/168 (80.36%), Query Frame = 1 
Query:    1 KKVDGMVSCLASRSGTKSDSFAIDYQATLNCLEAAKKQGTNHFVMLSAFCVKKPTLQFQKAKLKFENKLVEAGDA--GEIGYSIVRPTAFFKSVSGQLEVVQGGAPFVVFGDGTMCKCNPIAEADLATYLVDCITDKTKTNKILNIGGPDDGLTMTAQGNLVRQTLCG 498
            + VD ++SCLASRSGTKSDS+A+DYQAT NCL+A +K G  HFV+LSA+CV+KP LQFQ AKL+FE +LV A  A    + YSIVRPTAFFKSVSGQLEVV+GG PFVVFGDGTMCKCNPIAE DLA Y+VD + D  + NK+LN+GGPD+G TM  QG L+ +  CG
Sbjct:   73 RSVDAVISCLASRSGTKSDSWAVDYQATANCLQAGQKAGIKHFVLLSAYCVRKPLLQFQLAKLQFEKELVAASKAETNPVNYSIVRPTAFFKSVSGQLEVVKGGFPFVVFGDGTMCKCNPIAEVDLARYMVDSMRDPERDNKVLNLGGPDEGYTMAQQGELLAEA-CG 239
[Close]
BLAST of mRNA_L-elsbetiae_contig10287.329.1 vs. uniprot
Match: A0A7S3Y013_HETAK (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y013_HETAK)

HSP 1 Score: 228 bits (581), Expect = 4.320e-71
Identity = 116/166 (69.88%), Postives = 135/166 (81.33%), Query Frame = 1 
Query:    1 KKVDGMVSCLASRSGTKSDSFAIDYQATLNCLEAAKKQGTNHFVMLSAFCVKKPTLQFQKAKLKFENKLVEAGDAGEIGYSIVRPTAFFKSVSGQLEVVQGGAPFVVFGDGTMCKCNPIAEADLATYLVDCITDKTKTNKILNIGGPDDGLTMTAQGNLVRQTLCG 498
            ++VD ++SCLASRSGTKSDSF IDYQATLN LEAA+     HFV+LSAFCV+KPTLQFQ AKL+FE  L  A D   I +SIVRPTAFFKSVSGQLEVVQ GAPFV FGDGTMCKCNPIAE+DLA Y+V+CI +  K NK+LN+GGPD+GLTM  QG ++ +  CG
Sbjct:  131 EQVDAVISCLASRSGTKSDSFLIDYQATLNSLEAARAAKAKHFVLLSAFCVRKPTLQFQLAKLQFEKALRSADD---ITHSIVRPTAFFKSVSGQLEVVQAGAPFVYFGDGTMCKCNPIAESDLAEYMVNCIEEVEKRNKVLNLGGPDEGLTMRQQGEILAEA-CG 292
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BLAST of mRNA_L-elsbetiae_contig10287.329.1 vs. uniprot
Match: B8BXU7_THAPS (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXU7_THAPS)

HSP 1 Score: 225 bits (573), Expect = 7.080e-69
Identity = 109/167 (65.27%), Postives = 134/167 (80.24%), Query Frame = 1 
Query:    4 KVDGMVSCLASRSGTKSDSFAIDYQATLNCLEAAKKQGTNHFVMLSAFCVKKPTLQFQKAKLKFENKLVEAGDAGEIGYSIVRPTAFFKSVSGQLEVVQGGAPFVVFGDGTMCKCNPIAEADLATYLVDCITDKTKTNKILNIGGPDDGLTMTAQGNLVRQTLCGAP 504
            K+D +VSCLASRSG K D++AIDYQATLNCLE+ +  G  HFV+LSAFCVK P LQFQ+AKLKFE+ L    D   + YSIVRPTAFFKSVSGQLEV+Q GAPFV+FGDG + +CNPI+EADLATYL+DCI DK++ NKI+N+GGPD+ LTM  QG ++  ++   P
Sbjct:  212 KIDAVVSCLASRSGIKKDAYAIDYQATLNCLESGRAVGARHFVLLSAFCVKNPWLQFQQAKLKFESALTAQSD---MSYSIVRPTAFFKSVSGQLEVIQSGAPFVMFGDGEVTRCNPISEADLATYLIDCIADKSRLNKIINLGGPDEPLTMKKQGEMLYASIGKEP 375
[Close]
BLAST of mRNA_L-elsbetiae_contig10287.329.1 vs. uniprot
Match: A0A7R9ZKM2_9STRA (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKM2_9STRA)

HSP 1 Score: 218 bits (554), Expect = 2.810e-67
Identity = 110/167 (65.87%), Postives = 134/167 (80.24%), Query Frame = 1 
Query:    4 KVDGMVSCLASRSGTKSDSFAIDYQATLNCLEAAKKQGTNHFVMLSAFCVKKPTLQFQKAKLKFENKLVEAGDAGEIGYSIVRPTAFFKSVSGQLEVVQGGAPFVVFGDGTMCKCNPIAEADLATYLVDCITDKTKTNKILNIGGPDDGLTMTAQGNLVRQTLCGAP 504
            K++ ++SCLASRSG K D++AIDYQAT NCL+A       HFV+LSAFCVK P LQFQ+AKLKFE+ L EA D  ++ YSIVRPTAFFKSVSGQLEVVQ GAPFV+FGDG + +CNPIAEADLATYL+DCI DK++ N ILN+GGPD+ LTM  QG ++ Q++   P
Sbjct:  111 KIESVISCLASRSGIKKDAYAIDYQATKNCLDAGMANDARHFVLLSAFCVKNPWLQFQQAKLKFESDL-EAQD--KMTYSIVRPTAFFKSVSGQLEVVQQGAPFVMFGDGEVTRCNPIAEADLATYLIDCIADKSRENAILNLGGPDEPLTMKTQGEMLFQSVGKEP 274
[Close]
BLAST of mRNA_L-elsbetiae_contig10287.329.1 vs. uniprot
Match: A0A1Z5J6R6_FISSO (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6R6_FISSO)

HSP 1 Score: 218 bits (555), Expect = 3.950e-67
Identity = 106/160 (66.25%), Postives = 130/160 (81.25%), Query Frame = 1 
Query:    1 KKVDGMVSCLASRSGTKSDSFAIDYQATLNCLEAAKKQGTNHFVMLSAFCVKKPTLQFQKAKLKFENKLVEAGDAGEIGYSIVRPTAFFKSVSGQLEVVQGGAPFVVFGDGTMCKCNPIAEADLATYLVDCITDKTKTNKILNIGGPDDGLTMTAQGNLV 480
            +K+D +VSCLASRSG K D++ IDYQATLNCLEA +  G  HFV+LSAFCVK P LQFQ+AKLKFE  L E  D   + +SIVRPTAFFKSVSGQLEV+Q GAP+V FGDG + +CNPIAE+DLATYL+DC+TDKT+  +I+N+GGPD+ LTM  QG ++
Sbjct:  118 QKIDAIVSCLASRSGIKKDAYLIDYQATLNCLEAGRAVGAGHFVLLSAFCVKNPWLQFQQAKLKFEAALQEQTD---MTWSIVRPTAFFKSVSGQLEVIQSGAPYVAFGDGEVTRCNPIAESDLATYLLDCVTDKTRHQRIINLGGPDEPLTMKMQGEML 274
[Close]
BLAST of mRNA_L-elsbetiae_contig10287.329.1 vs. uniprot
Match: K0SDG7_THAOC (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SDG7_THAOC)

HSP 1 Score: 217 bits (553), Expect = 6.880e-66
Identity = 106/167 (63.47%), Postives = 133/167 (79.64%), Query Frame = 1 
Query:    4 KVDGMVSCLASRSGTKSDSFAIDYQATLNCLEAAKKQGTNHFVMLSAFCVKKPTLQFQKAKLKFENKLVEAGDAGEIGYSIVRPTAFFKSVSGQLEVVQGGAPFVVFGDGTMCKCNPIAEADLATYLVDCITDKTKTNKILNIGGPDDGLTMTAQGNLVRQTLCGAP 504
            K+D ++SCLASRSG K D++AIDYQATLNCLE+ +     HFV+LSAFCVK P LQFQ+AKLKFE  L    D   + +SIVRPTAFFKSVSGQLEV+Q GAPFV+FGDG + +CNPI+EADLATYL+DCI DK+++NKI+N+GGPD+ LTM  QG ++ + +   P
Sbjct:  173 KIDAVISCLASRSGIKKDAYAIDYQATLNCLESGRAVDARHFVLLSAFCVKNPWLQFQQAKLKFEAALEAQND---MTWSIVRPTAFFKSVSGQLEVIQQGAPFVMFGDGEVTRCNPISEADLATYLIDCIADKSRSNKIINLGGPDEPLTMKKQGEMLYKAVGKEP 336
[Close]
BLAST of mRNA_L-elsbetiae_contig10287.329.1 vs. uniprot
Match: B7GC47_PHATC (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GC47_PHATC)

HSP 1 Score: 209 bits (532), Expect = 1.250e-63
Identity = 104/160 (65.00%), Postives = 126/160 (78.75%), Query Frame = 1 
Query:    1 KKVDGMVSCLASRSGTKSDSFAIDYQATLNCLEAAKKQGTNHFVMLSAFCVKKPTLQFQKAKLKFENKLVEAGDAGEIGYSIVRPTAFFKSVSGQLEVVQGGAPFVVFGDGTMCKCNPIAEADLATYLVDCITDKTKTNKILNIGGPDDGLTMTAQGNLV 480
            +KV  +VSCLASRSG K D++ IDYQATLNCL A +  G  HFV+LSAFCVK P LQFQ+AKLKFE  L E  D   + ++IVRPTAFFKSVSGQLEVVQGGAPFV+FGDG + +CNPIAEA+LA YL+D +TD T+ N + N+GGPD+ LTM  QG ++
Sbjct:  119 RKVQAVVSCLASRSGVKKDAYRIDYQATLNCLNAGRAVGARHFVLLSAFCVKNPWLQFQQAKLKFEAALQEQSD---MTWTIVRPTAFFKSVSGQLEVVQGGAPFVMFGDGQVTRCNPIAEAELAQYLMDSVTDPTRRNLVRNLGGPDEPLTMRKQGEMM 275
[Close]
BLAST of mRNA_L-elsbetiae_contig10287.329.1 vs. uniprot
Match: A0A7S4D9Q0_HETAK (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9Q0_HETAK)

HSP 1 Score: 209 bits (532), Expect = 2.780e-63
Identity = 103/169 (60.95%), Postives = 131/169 (77.51%), Query Frame = 1 
Query:    1 KKVDGMVSCLASRSGTKSDSFAIDYQATLNCLEAAKKQGTNHFVMLSAFCVKKPTLQFQKAKLKFENKLVEAGDAGEIGYSIVRPTAFFKSVSGQLEVVQGGAPFVVFGDGTMCKCNPIAEADLATYLVDCITDKTKTNKILNIGGPDDGLTMTAQGNLVRQTLCGAPR 507
            ++VD ++SCLASR GTK D++ IDYQATLN L+AA++  + HFV+LSAFCV+KP LQ Q+AKLKFE  L  A D   I +SIVRPTAFFKSVSGQ+E V+ G PFV FGDG+MCKCNPIAE +LA Y+V+CI +  K N+ILN+GGPD+G T   QG  + + +CG P+
Sbjct:  137 EQVDAVISCLASRWGTKDDAYRIDYQATLNTLDAAREANSKHFVLLSAFCVRKPLLQLQQAKLKFEAALQSADD---ITHSIVRPTAFFKSVSGQMEAVKSGTPFVYFGDGSMCKCNPIAETELAEYMVNCIEEPEKRNQILNLGGPDEGFTQKQQGECMAE-ICGIPQ 301
[Close]
BLAST of mRNA_L-elsbetiae_contig10287.329.1 vs. uniprot
Match: A0A448ZEL1_9STRA (Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZEL1_9STRA)

HSP 1 Score: 205 bits (522), Expect = 2.110e-62
Identity = 102/158 (64.56%), Postives = 128/158 (81.01%), Query Frame = 1 
Query:    7 VDGMVSCLASRSGTKSDSFAIDYQATLNCLEAAKKQGTNHFVMLSAFCVKKPTLQFQKAKLKFENKLVEAGDAGEIGYSIVRPTAFFKSVSGQLEVVQGGAPFVVFGDGTMCKCNPIAEADLATYLVDCITDKTKTNKILNIGGPDDGLTMTAQGNLV 480
            ++ ++SCLASRSG K D++AIDYQAT NCL++    G  HFV+LSAFC K P LQFQ+AKLKFE  LV A D  +I ++IVRPTAFFKSVSGQLEVVQ GAPFV+FGDG + +CNPIAEADLATYLVD ITD+++ N+ +++GGPD+ LTM  QG ++
Sbjct:  117 IEAVISCLASRSGIKKDAYAIDYQATKNCLDSGIATGARHFVLLSAFCCKNPWLQFQQAKLKFEADLVAAQD--KITHTIVRPTAFFKSVSGQLEVVQQGAPFVMFGDGKVTRCNPIAEADLATYLVDSITDESRLNRNIDLGGPDEPLTMLKQGEML 272
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10287.329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5N4_9PHAE2.730e-9684.71Divinyl chlorophyllide a 8-vinyl-reductase, chloro... [more]
A0A835ZBC9_9STRA2.200e-7267.26Divinyl chlorophyllide a 8-vinyl-reductase, chloro... [more]
A0A7S3Y013_HETAK4.320e-7169.88Divinyl chlorophyllide a 8-vinyl-reductase, chloro... [more]
B8BXU7_THAPS7.080e-6965.27Divinyl chlorophyllide a 8-vinyl-reductase, chloro... [more]
A0A7R9ZKM2_9STRA2.810e-6765.87Divinyl chlorophyllide a 8-vinyl-reductase, chloro... [more]
A0A1Z5J6R6_FISSO3.950e-6766.25Divinyl chlorophyllide a 8-vinyl-reductase, chloro... [more]
K0SDG7_THAOC6.880e-6663.47Divinyl chlorophyllide a 8-vinyl-reductase, chloro... [more]
B7GC47_PHATC1.250e-6365.00Divinyl chlorophyllide a 8-vinyl-reductase, chloro... [more]
A0A7S4D9Q0_HETAK2.780e-6360.95Divinyl chlorophyllide a 8-vinyl-reductase, chloro... [more]
A0A448ZEL1_9STRA2.110e-6264.56Divinyl chlorophyllide a 8-vinyl-reductase, chloro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10287contigL-elsbetiae_contig10287:218..5508 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.7
Seed ortholog evalue3.4e-75
Seed eggNOG ortholog2880.D7FPA5
Preferred nameDVR
KEGG rclassRC01376
KEGG koko:K19073
KEGG ReactionR06272,R06896
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009507,GO:0009526,GO:0009534,GO:0009536,GO:0009579,GO:0009941,GO:0009987,GO:0015994,GO:0015995,GO:0016020,GO:0016491,GO:0018130,GO:0019438,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0033013,GO:0033014,GO:0034641,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0051744,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.divinyl chlorophyllide a 8-vinyl-reductase activity
EggNOG OGsCOG0702@1,KOG1203@2759
EC1.3.1.75
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size510
Cds size495
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10287.329.1prot_L-elsbetiae_contig10287.329.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10287 218..5493 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815257.6509364-CDS-L-elsbetiae_contig10287:217..3551622815257.6509364-CDS-L-elsbetiae_contig10287:217..355Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10287 218..355 -
1691682800.4438226-CDS-L-elsbetiae_contig10287:217..3551691682800.4438226-CDS-L-elsbetiae_contig10287:217..355Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10287 218..355 -
1622815257.7488363-CDS-L-elsbetiae_contig10287:1519..16001622815257.7488363-CDS-L-elsbetiae_contig10287:1519..1600Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10287 1520..1600 -
1691682800.4549117-CDS-L-elsbetiae_contig10287:1519..16001691682800.4549117-CDS-L-elsbetiae_contig10287:1519..1600Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10287 1520..1600 -
1622815257.761962-CDS-L-elsbetiae_contig10287:3482..36021622815257.761962-CDS-L-elsbetiae_contig10287:3482..3602Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10287 3483..3602 -
1691682800.4640994-CDS-L-elsbetiae_contig10287:3482..36021691682800.4640994-CDS-L-elsbetiae_contig10287:3482..3602Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10287 3483..3602 -
1622815257.7735677-CDS-L-elsbetiae_contig10287:5337..54931622815257.7735677-CDS-L-elsbetiae_contig10287:5337..5493Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10287 5338..5493 -
1691682800.4788404-CDS-L-elsbetiae_contig10287:5337..54931691682800.4788404-CDS-L-elsbetiae_contig10287:5337..5493Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10287 5338..5493 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815257.7832537-UTR-L-elsbetiae_contig10287:5493..55081622815257.7832537-UTR-L-elsbetiae_contig10287:5493..5508Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10287 5494..5508 -
1691682800.4914186-UTR-L-elsbetiae_contig10287:5493..55081691682800.4914186-UTR-L-elsbetiae_contig10287:5493..5508Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10287 5494..5508 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10287.329.1

>prot_L-elsbetiae_contig10287.329.1 ID=prot_L-elsbetiae_contig10287.329.1|Name=mRNA_L-elsbetiae_contig10287.329.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=165bp
MVSCLASRSGTKSDSFAIDYQATLNCLEAAKKQGTNHFVMLSAFCVKKPT
LQFQKAKLKFENKLVEAGDAGEIGYSIVRPTAFFKSVSGQLEVVQGGAPF
VVFGDGTMCKCNPIAEADLATYLVDCITDKTKTNKILNIGGPDDGLTMTA
QGNLVRQTLCGAPRV
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mRNA from alignment at L-elsbetiae_contig10287:218..5508-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10287.329.1 ID=mRNA_L-elsbetiae_contig10287.329.1|Name=mRNA_L-elsbetiae_contig10287.329.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5291bp|location=Sequence derived from alignment at L-elsbetiae_contig10287:218..5508- (Laminarionema elsbetiae ELsaHSoW15)
AAAAAGGTTGATGGGATGGTGTCGTGCCTGGCGAGCCGAAGCGGGACGAA
GTCCGACAGCTTCGCGATAGACTACCAGGCGACGCTCAACTGCCTGGAGG
CGGCCAAGAAGCAGGGGACGAACCACTTCGTCATGCTTTCGGCCTTTTGC
GTCAAGAAGCCCACGCTTCAGGTGAGCTTTTTTTTTATCAAATTTCGTTG
ATTTGATTTGAATATGTATGTAACGACAGCAGCATCGATTGACTGACCCG
GCACGCGCTCATTCACAACAACAATTTCGGAGGAAGCTGGGTTTCTCATG
CGAGGAGGCCAAAGGTTAAGGTTACCGCCCTGTTTTTGTAACTAATGTAT
ACAAATGTCAGCAGTCTACTGTACGTCCGGTCTGTGAAAATATCGTTCCA
GAGGGATCTGTTGTAGGCATACATCCTACCCCCCCTTTTTCCTTTCCCAA
GATATACTCGCACAAAATCCGTAATCCATATATGGTTCATAAGAATAGTG
TATGTATATACAAGTTCGTTGGTGAAAAATACTCTTCAAAGGATCGGCTG
CAATGTGGTTTTTAAGTCCGGTACTCGCGACGGAAGAGCACCCGTACTTA
ATTCTGGTGTATTTAGTATAGGTTACAAATTACTGTTTTTTTTTTCCTTA
AAATCTTCGCTTGGCTTTCTTACACGCGATTTACAGCAGCAGCAGCGGGT
CAGCGCTTGCGGAAGGGACCCTGATCGCACCAACCCATTGAGTGATCGTC
ATTTCTTGGTCTGTAGGGGCGGAGTGGTGTCAAGGGCTTGGGAAAGAAGA
GAGGGCTGACTCCATTCCCCCTGTGTTTCATGTACGACTTGAGATGTTTC
CAGCCGATTTACCGGTCGGGGGGGGCGCAGCACAAATACACCAGCCCTGG
GATCAAGTCTTATATACACCAGTAGCTCGGTACAGCCACCTAGGCCTAAA
CCCGGCACACCAACCTAGCCTGGTGTGTGGGTTAGGGTTAGGGTTTAGGA
CGGTTAGGGTGCGTGTTAGGTCGAGCGCCGTGGTGAACCAAAAGGCCGGA
AACCTAGCGTGGGCCTTGTTTTTCGCGTCTACCTCCAACTGAAACCTAGG
TGTATTACTCCGCTGGTGTAAAAGCTAAACACCAGGGCTTGTGTATGGAG
GAGGGCGACGATCTGGCACCCATCCACGACGCACGACCCCCTACTCCCCC
GCCCCCCCCCCAAAGCATCCACATGGCCCCCACAGATACATAAACTTCCT
GCGATCCCCCAATTCTAAAAAAGAGCTGGTTGTGGGGGCAGCGGGGCGGG
AGGGGGGTATTTATCTAGGAAATAGAGTGAAAAATTCCTCACAGTGCCCC
TTTTTTAGAATTGGGGGCCCTGCTGCAGGAAGCCTGTATCACCGATGACA
TCCGGTGCCGGCTGCTGGTACTGCATATGTATGTACCACCTACACAGAAT
GTATGTAGCTTTTTTTATTTTGTCTCTTAACTCCAGTCGTATACCTTTTG
TGAGGGTACACACAGTGTAGCTTTTCTTTTTTTTGTGTACCTGTGTGGTG
ATTGGACTTACCGGCCCCCGTCTCTCTTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTTGTGTGTGTTTACTCCTCCCATTATTGGCATACTCGTCGT
CTGCCCCACTGCCCTCATACTCCACTGGGACTAGCTAGACGACCCAACCG
GGGTCACACAGGAGGCGCGGGGAGGGGGTGGACCCCCTTCTGCGGGGCCT
GCCTTCGGTGTTTTTATGTATCGCGAGCAGGGTTCAGCACTCCCCACCCT
CGTCAACAATGAAGTCGAAGTAATATTTGTGTGTGTGGCGTGTGCGTGTG
CGTGTGCGTGTGCGTGTGTGTGTGTGTGTGCCTGTTTGATGCTGGGTCGC
CCTCAGTTCCAGAAGGCGAAGCTGAAGTTCGAGAACAAGCTGGTGGAGGC
GGGGGACGCGGGAGAGATCGGGTACAGCATAGTGAGACCGACGGCCTTCT
TCAAGAGCGTCTCCGGTCAGCTGGAGGTATGCAATGCTTGCACATATTTT
ACATTCATGCATATGTAGAGGTAATATCACGGTGGGATATGGATCTTCAG
TTCTAGGTCGCTGAGAGCGCAGCGCTCTCTCAGCCCGACCGCTGTGCGAG
AAGCAGGGAAACCTTCCCCTCTCTCAAATCAGTTTGTCAAGCGTTGCCTC
TCTCAGCGACCACGCGTCAGCGCCGTCCGACTTCCCCTTGCACGACGTCA
GCGAGAAGAGTCTTTCCAACACACACCCGTTGCCGCGAGATCGAGTCTAA
ACGCATTCGGGTCAGGCGAGGAACGCTGGCTCCGCCTCAAAACTGACTCT
GGAAACGATCCGCAAAACATAGTAACTGCAGACCTCAACCTGTGAGTGGC
ATTTTGTTTTTTTTTTTCAAGTCAGATTTTTGTGTCATGCACTAACGTTC
GTACGATATCACGGGGCAGTTTGTCAGTGCTCTTCCTTGTTGTATGAGTA
TTTCCATGTCGGAAAAGTGTACATACAGTAGTAGTAGTGGGACAACAAAA
GAGTATATTGGTGTGCTCAATTGTCGTCAACCAGCAGCCAGCGGCCGACA
CTGCGGTCTACCACGCTGTGCGTGAATTGCTAGATTTTTTTCTCATGGGT
CACGTCAGCTCAACCAAGTCTTCCTTCGGGTGACAGTGCCTTTTCTACGA
TCGATTTCATGCAAGAAGACGGCTTCAAAACTCATTTCGCGACCAATTAC
GCGACGACTTTTCGCCTCATTTGTCACAAAGAAAGTCGTAGATTTGTACT
ACAACGCGCTCAGTTCCTGTTCCTCTCACCAATGGTACCCTTGGTAGTCT
GGGTAACCACACATCATCGAACCCTCCCTGTGTATTAGCTGTCAGAAACC
GAAGGACGGGGGGGGGCGTGGGACCCCGCATCCGGAGCTCTTGTACATAC
ATACATACATACCATAAAAGGAGCCCATCGAGCACTGGAAGTAAATATGA
AGATGAAAAAAAAAAAACATACATACTGTACTAGTTCTACCACGGGCCCC
CAAAGGATGTTTGGGCTACAAAGATATTTTAGGTTTGTTTTTCTGCTCGC
TTCGCCAAATATTACGTCACTGTATGGAATACTGTTTGAGCCCCATATCG
AGTCCTTGCCCTAGTGTGGGTTAGGTTCCATCTTTGACTCAATTGTTTAT
TTCTAAAGAGAGAATAAAATGTGAGAAACAACAACACGTGCGGGATGTGC
GGCGTCGTTACACCCCTGGTTCGCTTGCCGGGTGGTTTATTTGTCCCCGC
CGTGCGTGCGTGCGTGCATGCGTACATGCGGCGCTTGCTTTGTCGGGCAG
CGCAGCGCGTGTTGTGGCGCCATCACAACAGAAGTAAATGGCAAGGGTGG
CGCCATCACGTAAGCAGCGTCTTGAATCAATTCGATTCGCGGATGGTGTT
TTTTTTTTGTTTTTTCTTCAGATCTCGTAAGCGAAGCACCGAGTGCCTGA
TTGTCTGTCACCCGTCCCGTCCGCTTGGTGTTGCGGGCGAGCTCGGGAGG
TACCGTGTCGCCGGTGACAACCGGCTTGGTTTGCTCGAGAACCGACTTGG
TCTGGTTGTTTTCCGCTCAAACGATAAGAACCATTACGGCGAAATGTGCT
CAAACACCCATTGAACAATCGCCCGTCCAAACAAACGCCCATGCATACGT
ACGCTCTCAGGGAGAAAGCTGTTCCGCCACGCTCTTTGCGGATTTACGGG
GGGACGACTGCTTTTGACGCGTACCATGTACCGTGATGTATGTATCACCT
ACCGTATGCACTTCGAATACATACGTATGTATTTGCGTTTCGTGCAGACG
TATGATCAAAATTGTGTCGATATCGGTCTTTGCCCCGTCCCCCGTGGGAT
CCAACCAGGTGGTGCAGGGCGGCGCGCCGTTCGTGGTGTTCGGCGACGGC
ACGATGTGCAAGTGCAACCCTATCGCGGAGGCGGACTTGGTGAGTGCCAG
CGTCCCCCACCCCAACGCCCACTCCCACTCCCACTCCCACCCCCCACCGG
CATGGACACCTTTTGTAGATCAATCCTATCGTAGCTACGTAGGAAAGTGT
GCCATCCCGCCGTCGGTGTTACACCCCGCCCGCTCCGAGAAAAGACAGGA
AGGGCTATCTTTATGGCTGCAGCTTTCGACACTCCTTGGGTTGTGTGTGT
GTGTGTGTGTGTGTGTATTTTTATTCTTATTTCTTCCCATTATTGGCTTA
TTCGTCGTCTGCCCCACTGGCTCCCTTCCTCCACTACGACCGGCTAGACG
ACCCAACCGGGGTCACACAGGAGGGGGGGGGGGGGTGGACCCCCTTCTGC
GGGGCCTGTGTGTGGGATTGGCAGTCGTCGCGTTCGTGTGTGGCGTGCGA
GGCCGGTGTTGCACAGTAGACAAAAGCCACCATCTGAGCTATGGAATTAG
ATACCTACCTAATTACTGAAGTTTCAAAATTGTTTTTTTTTTCGTTTGAA
GAGCGCACAGCAGGAGTACGGTACGATACGATACGCCGTCATCACCATTT
ATTGAATTCTTGTCTTATTTTACTATTATCACGGGAATTGATGTGTACCT
TTTTCTTGGGTATAAGTTATAGCCTGTAACCACGGGAATTGACCGCATCA
AGTGTTGGATTCTACGGACATAGGGAGGTATGTACTGGGTGGAGAGATTG
GAACGGTTTTTAATGTGAAGACAACAAAAACAATATTGTTTTCCCGCTGT
GATTTAAATAAAAAAATCTCGTCTCTGAGAGGGGGGAACAGTAGTTGGTT
TGTGCCCATGCTGTTACCTATGTATACATGCAAAGGTAGGTTTACGGCAG
GGTTTTCTGTCGTCAGGGCGTGTGTCTCTCGCGAGTCTGTGCGTGTTTCG
GAGCTGGTAAACGGGAGGTCAGTTGATTTGATTTCCCGTAAACAACGGCA
GAGGGGGGGGGGCTCAGGGAGAGGAAACTATATGTGCGAGGAGGCGACCA
CGGGTCAGAGCAGAGCTTAGGCAAGATGCCCCCTCCCCTCGTGGCAAGGA
AATAAATGAATAAATGTGATGAACAATTAAAATAAAGAAAACACGATGAG
AGGACAATCATGTTTTGACGTCGGTGTTGTTCTTTTCCGTGTTTTGTTTG
CAGGCGACGTACCTCGTGGACTGCATCACGGACAAGACGAAGACGAATAA
GATTCTCAACATCGGGGGGCCGGACGATGGGCTTACAATGACGGCCCAGG
GGAACCTGGTGAGACAAACCTTGTGCGGAGCCCCCCGGGTT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10287:218..5508-

>mRNA_L-elsbetiae_contig10287.329.1 ID=mRNA_L-elsbetiae_contig10287.329.1|Name=mRNA_L-elsbetiae_contig10287.329.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=990bp|location=Sequence derived from alignment at L-elsbetiae_contig10287:218..5508- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGTCGTGCCTGGCGAGCCGAAGCGGGACGAAGTCCGACAGCTTCGC
GATAGACTACCAGGCGACGCTCAACTGCCTGGAGGCGGCCAAGAAGCAGG
GGACGAACCACTTCGTCATGCTTTCGGCCTTTTGCGTCAAGAAGCCCACG
CTTCAGATGGTGTCGTGCCTGGCGAGCCGAAGCGGGACGAAGTCCGACAG
CTTCGCGATAGACTACCAGGCGACGCTCAACTGCCTGGAGGCGGCCAAGA
AGCAGGGGACGAACCACTTCGTCATGCTTTCGGCCTTTTGCGTCAAGAAG
CCCACGCTTCAGTTCCAGAAGGCGAAGCTGAAGTTCGAGAACAAGCTGGT
GGAGGCGGGGGACGCGGGAGAGATCGGGTACAGCATAGTGAGACCGACGG
CCTTCTTCAAGAGCGTCTCCGGTCAGCTGGAGTTCCAGAAGGCGAAGCTG
AAGTTCGAGAACAAGCTGGTGGAGGCGGGGGACGCGGGAGAGATCGGGTA
CAGCATAGTGAGACCGACGGCCTTCTTCAAGAGCGTCTCCGGTCAGCTGG
AGGTGGTGCAGGGCGGCGCGCCGTTCGTGGTGTTCGGCGACGGCACGATG
TGCAAGTGCAACCCTATCGCGGAGGCGGACTTGGTGGTGCAGGGCGGCGC
GCCGTTCGTGGTGTTCGGCGACGGCACGATGTGCAAGTGCAACCCTATCG
CGGAGGCGGACTTGGCGACGTACCTCGTGGACTGCATCACGGACAAGACG
AAGACGAATAAGATTCTCAACATCGGGGGGCCGGACGATGGGCTTACAAT
GACGGCCCAGGGGAACCTGGTGAGACAAACCTTGTGCGGAGCCCCCCGGG
TTGCGACGTACCTCGTGGACTGCATCACGGACAAGACGAAGACGAATAAG
ATTCTCAACATCGGGGGGCCGGACGATGGGCTTACAATGACGGCCCAGGG
GAACCTGGTGAGACAAACCTTGTGCGGAGCCCCCCGGGTT
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