mRNA_L-elsbetiae_contig10204.251.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10204.251.1 vs. uniprot
Match: D7FQG4_ECTSI (Cilia- and flagella-associated protein 52 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG4_ECTSI) HSP 1 Score: 379 bits (973), Expect = 7.410e-126 Identity = 182/197 (92.39%), Postives = 188/197 (95.43%), Query Frame = 1 Query: 1 VHAVDAQMGGMRRTIECISITEDDKHAYCGTRTGDVLKFKIDRDDIRYFNDPDTIRPTLAAYSLEKFGKGVRSVCCVRNPETGNTNTLVGGGDGTVGFINQSLNKVVGKHCELMGAVTSIAMCPANQGFFVGTSLSNRYWVTMDMETELRGTCHFARVNDIIFPADCSDLFVTCSVADIRVWNATLRQELLRIQVSD 591 VHAVDAQMGGMRR IECISITEDD+HAYCGTRTGDVLKFKIDRDDIRYFNDPDTIRPTLA YSLEKFGKGVRSV CV NPETGNTNTLVGGGDGTV FINQSLNKV GKHCELMGAVTSIA+CP N+GFFVGT+LSNRYWVTMDMETELRGTCHFARVNDIIFPA CSDLF+TCSVADIRVWNATLRQELLRIQV + Sbjct: 202 VHAVDAQMGGMRRAIECISITEDDEHAYCGTRTGDVLKFKIDRDDIRYFNDPDTIRPTLAGYSLEKFGKGVRSVRCVLNPETGNTNTLVGGGDGTVSFINQSLNKVAGKHCELMGAVTSIAVCPGNKGFFVGTALSNRYWVTMDMETELRGTCHFARVNDIIFPAGCSDLFITCSVADIRVWNATLRQELLRIQVPN 398
BLAST of mRNA_L-elsbetiae_contig10204.251.1 vs. uniprot
Match: A0A835Z6M8_9STRA (Cilia- and flagella-associated protein 52 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M8_9STRA) HSP 1 Score: 272 bits (695), Expect = 8.470e-85 Identity = 126/197 (63.96%), Postives = 153/197 (77.66%), Query Frame = 1 Query: 1 VHAVDAQMGGMRRTIECISITEDDKHAYCGTRTGDVLKFKIDRDDIRYFNDPDTIRPTLAAYSLEKFGKGVRSVCCVRNPETGNTNTLVGGGDGTVGFINQSLNKVVGKHCELMGAVTSIAMCPANQGFFVGTSLSNRYWVTMDMETELRGTCHFARVNDIIFPADCSDLFVTCSVADIRVWNATLRQELLRIQVSD 591 +HAVDA+MG +RR I C++I DD HA CGTRTGD+L+F IDRD I+ N+PDT+RPTL+ S EKFG+GVR++ CV N TG TN LV GDGTV F+N +LN+V + CEL+G TS+A+CP +GFF GT LSNRYWV+M+ME ELRGTCH RVND++FP C LFVTCSV DIRVWNA RQELLRIQV + Sbjct: 200 IHAVDAKMGTVRRIISCVAIAADDSHAVCGTRTGDLLRFTIDRDGIQSCNEPDTVRPTLSECSREKFGRGVRALACVLNAATGATNCLVAAGDGTVAFVNPALNRVRERACELLGGCTSVALCPDGKGFFAGTELSNRYWVSMNMEVELRGTCHHGRVNDVVFPKGCPSLFVTCSVQDIRVWNAKQRQELLRIQVPN 396
BLAST of mRNA_L-elsbetiae_contig10204.251.1 vs. uniprot
Match: A0A6V1NYK3_HETAK (Cilia- and flagella-associated protein 52 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NYK3_HETAK) HSP 1 Score: 255 bits (651), Expect = 3.340e-78 Identity = 111/197 (56.35%), Postives = 154/197 (78.17%), Query Frame = 1 Query: 1 VHAVDAQMGGMRRTIECISITEDDKHAYCGTRTGDVLKFKIDRDDIRYFNDPDTIRPTLAAYSLEKFGKGVRSVCCVRNPETGNTNTLVGGGDGTVGFINQSLNKVVGKHCELMGAVTSIAMCPANQGFFVGTSLSNRYWVTMDMETELRGTCHFARVNDIIFPADCSDLFVTCSVADIRVWNATLRQELLRIQVSD 591 + A+DA++G M+R I+C+ ++ DD+ AYCGT+TGD+L+ ++RDDI+ +NDPD + PTL YS ++ KG+++V CV NP+TGNTN LVG GDGT+GF+N +LN V GK LMG VTS+++ P +G +VGT + RY+VT+DM+ ELRGTCH+ + D++FP DC DLF+TCSV DIRVWNA +RQELLRIQV + Sbjct: 200 IQAMDAKLGQMKRVIQCLDVSPDDEVAYCGTKTGDLLRINVNRDDIQGYNDPDAVVPTLQGYSTHRYAKGIKAVRCVLNPQTGNTNVLVGSGDGTLGFMNPALNPVAGKSAALMGGVTSVSLAPDGRGAYVGTDQAMRYYVTLDMDVELRGTCHYGPIMDVVFPVDCPDLFLTCSVNDIRVWNARVRQELLRIQVPN 396
BLAST of mRNA_L-elsbetiae_contig10204.251.1 vs. uniprot
Match: A0A7S1U044_9STRA (Cilia- and flagella-associated protein 52 n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U044_9STRA) HSP 1 Score: 234 bits (598), Expect = 1.140e-70 Identity = 108/197 (54.82%), Postives = 146/197 (74.11%), Query Frame = 1 Query: 1 VHAVDAQMGGMRRTIECISITEDDKHAYCGTRTGDVLKFKIDRDDIRYFNDPDTIRPTLAAYSLEKFGKGVRSVCCVRNPETGNTNTLVGGGDGTVGFINQSLNKVVGKHCELMGAVTSIAMCPANQGFFVGTSLSNRYWVTMDMETELRGTCHFARVNDIIFPADCSDLFVTCSVADIRVWNATLRQELLRIQVSD 591 +HAV+A+MG +RR IE + IT DD A CGT++GD+++F IDRD I+ +NDPDT+ P+L ++ +KF GV+SVCCV N +G TN LVGGGDG+V ++N S+NKV G +++GAVTSI P GF +GT +NRY ++ ++ EL+GTCH+ VNDI+FP DCSDLF+TCSV DIRVW + ELLRIQV + Sbjct: 176 MHAVNAKMGPLRRVIETLDITPDDVFAVCGTQSGDLVRFTIDRDGIQDYNDPDTVTPSLELFTKDKFVGGVKSVCCVLNERSGATNYLVGGGDGSVAYVNPSMNKVKGMSAQVIGAVTSIVRTPEGNGFHIGTDQANRYILSEQLDAELKGTCHYGGVNDIVFPKDCSDLFITCSVTDIRVWRTEEQMELLRIQVMN 372
BLAST of mRNA_L-elsbetiae_contig10204.251.1 vs. uniprot
Match: A0A7S3H4V8_9STRA (Cilia- and flagella-associated protein 52 (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4V8_9STRA) HSP 1 Score: 204 bits (519), Expect = 2.900e-59 Identity = 105/198 (53.03%), Postives = 128/198 (64.65%), Query Frame = 1 Query: 1 VHAVDAQMGGMRRTIECISITEDDKHAYCGTRTGDVLKFKIDRDDIRYFNDPDTIRPTLAAYSLEKFGKGVRSVCCVRNPETGNTNTLVGGGDGTVGFINQSLNKVVGKHCELMGAVTSIAMCPANQGFFVGTSLSNRYWVTMDM-ETELRGTCHFARVNDIIFPADCSDLFVTCSVADIRVWNATLRQELLRIQVSD 591 +HA+D ++G +RR ISI E D AY GT TGDV+K IDR++I F DPD P + + +F KG V CV NP TGNTN LVG GDGT+ FIN +LN V G +LMG VTSIAM P F VGT NRY V+ D+ + EL+ +CHF +NDI FP C DL VT S DIRVWN+ +QELLRIQV + Sbjct: 196 LHAMDCRLGSVRRVFISISIEESDHVAYLGTTTGDVIKVSIDRNEILSFKDPDVTVPQMIGITKHRFSKGATVVFCVLNPATGNTNVLVGAGDGTIAFINHNLNLVAGYKTQLMGGVTSIAMHPKGAKFAVGTDQCNRYEVSKDLIQAELKTSCHFGPINDIAFPQGCPDLVVTSSFGDIRVWNSKAKQELLRIQVPN 393
BLAST of mRNA_L-elsbetiae_contig10204.251.1 vs. uniprot
Match: A0A482SVC4_9ARCH (Cilia- and flagella-associated protein 52 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVC4_9ARCH) HSP 1 Score: 204 bits (519), Expect = 4.250e-59 Identity = 104/198 (52.53%), Postives = 130/198 (65.66%), Query Frame = 1 Query: 1 VHAVDAQMGGMRRTIECISITEDDKHAYCGTRTGDVLKFKIDRDDIRYFNDPDTIRPTLAAYSLEKFGKGVRSVCCVRNPETGNTNTLVGGGDGTVGFINQSLNKVVGKHCELMGAVTSIAMCPANQGFFVGTSLSNRYWVTMDM-ETELRGTCHFARVNDIIFPADCSDLFVTCSVADIRVWNATLRQELLRIQVSD 591 +HA+DA++G +RR C +IT DD Y GT TGDV+K +DR++I F DPD P L + ++ K VR+V CV NP TGNTN LVG GDGT+ FIN ++NKV G +LMG VTSI+ P Q F VGT NRY V+ D+ E EL+ +CH VND+ FP C DL VT S DIR+WN RQELLRIQV + Sbjct: 163 LHAMDAKLGVVRRIFVCCAITNDDHFGYFGTSTGDVVKICLDRNEIMSFKDPDVTVPQLVGMTKDRLSKCVRAVVCVVNPSTGNTNVLVGAGDGTLLFINPNMNKVAGYKTQLMGGVTSISPHPKGQKFMVGTDQCNRYEVSKDLIEAELKTSCHVGSVNDVAFPEGCPDLIVTSSRGDIRIWNTRARQELLRIQVPN 360
BLAST of mRNA_L-elsbetiae_contig10204.251.1 vs. uniprot
Match: K0S6T1_THAOC (Cilia- and flagella-associated protein 52 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S6T1_THAOC) HSP 1 Score: 187 bits (476), Expect = 1.250e-52 Identity = 89/198 (44.95%), Postives = 129/198 (65.15%), Query Frame = 1 Query: 1 VHAVDAQMGGMRRTIECISITEDDKHAYCGTRTGDVLKFKIDRDDIRYFNDPDTIRPTLAAYSLEKFGKGVRSVCCVRNPETGNTNTLVGGGDGTVGFINQSLNKVVGKHCELMGAVTSIAMCPANQGFFVGTSLSNRYWVTMDMET-ELRGTCHFARVNDIIFPADCSDLFVTCSVADIRVWNATLRQELLRIQVSD 591 +H ++ +G +RR + C++I+ DD A+ G TG+V+K I RD+I+ F++P+ P + Y+ ++FG+GV+SV CV NP TGNTN + G GDGTV +N L ++ C+L GAVTSI++ P + F GT S RY V + T ELR T HF ++D+ FP S++FVT S DIRVW+A +QELLRI V + Sbjct: 199 LHPINVSLGTLRRDLTCLAISTDDAFAFAGNSTGEVVKIDIRRDEIKPFDEPEVFHPRIIGYNTDRFGQGVKSVACVVNPNTGNTNVIAGAGDGTVNILNPQLKRIPSHTCKLQGAVTSISLHPDGRTFLAGTESSQRYSVDISTFTPELRETAHFGGIHDVCFPRASSEIFVTASEQDIRVWSAKKKQELLRIDVPN 396
BLAST of mRNA_L-elsbetiae_contig10204.251.1 vs. uniprot
Match: F0YDJ7_AURAN (Cilia- and flagella-associated protein 52 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDJ7_AURAN) HSP 1 Score: 147 bits (371), Expect = 8.760e-38 Identity = 80/199 (40.20%), Postives = 117/199 (58.79%), Query Frame = 1 Query: 1 VHAVDAQMGGMRRTIECISITEDDKHAYCGTRTGDVLKFKIDRDDIRYFNDPDTIRPTLAAYSLEKFGKGVRSVCCVRNPETGNTNTLVGGGDGTVGFINQSLNKVVGKHCELMGAVTSIAMCPAN-QGFFVGTSLSNRYWVT-MDMETELRGTCHFARVNDIIFPADCSDLFVTCSVADIRVWNATLRQELLRIQVSD 591 +H +DA+MG M+R ++C+ ++ DD +A CGT+TG+VL+ ++RD I +NDPD + P L S ++FGKGV+S+C + DG V ++ G VTS++ P N + +GT L+NRY + + E L+GT H V D+ FP S +F+TCSVADIRVW+A R ELLRIQV + Sbjct: 204 IHPMDAKMGKMKRVVQCVDVSADDDYAMCGTQTGEVLQIDVNRDPILAYNDPDRMVPRLVNTSKDRFGKGVKSICVMPGASA----------DGLD----------VRWTAQVSGGVTSLSALPDNPRALAIGTDLANRYEIQDLGREPFLKGTAHTGAVFDVCFPEYSSQVFITCSVADIRVWDAAKRAELLRIQVPN 382
BLAST of mRNA_L-elsbetiae_contig10204.251.1 vs. uniprot
Match: A0A813IUY1_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IUY1_POLGL) HSP 1 Score: 136 bits (343), Expect = 3.000e-35 Identity = 83/199 (41.71%), Postives = 119/199 (59.80%), Query Frame = 1 Query: 1 VHAVDAQMGGMRRTIECISITEDDKHAYCGTRTGDVLKFKIDRDDIRYFNDPDTIRPTLAAYSLEKFGKGVRSVCCVRNPETGNTNTLVGGGDGTVGFI-NQSLNKVVGKHCELMGAVTSIAMCPANQGFFVGTSLSNRYWVTMDMET-ELRGTCHFARVNDIIFPADCSDLFVTCSVADIRVWNATLRQELLRIQVSD 591 + A A +G +R I + ++D AYCGT TGD+L+ ++ R + P AA S + F +GV S + + L+G GDGTV + +QS+ + C+++G+VTS+A+ FF GT+LSN YW+ +D T ELR TCH R+N + FPA S++F TCS++DIRVWNAT RQELLRIQV + Sbjct: 184 LRATQANLGQSKRITTNIVVDDNDAFAYCGTTTGDLLQVELTRALFKQ------ACPKGAA-SGKNFSRGVTSSIQLPCGDI-----LLGTGDGTVARVCHQSMR--LKNQCQVLGSVTSLALTADGTHFFCGTALSNIYWIDVDSLTAELRNTCHHERINQVAFPAGYSEVFATCSISDIRVWNATTRQELLRIQVPN 368
BLAST of mRNA_L-elsbetiae_contig10204.251.1 vs. uniprot
Match: A0A813DLD7_POLGL (Cilia- and flagella-associated protein 52 n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DLD7_POLGL) HSP 1 Score: 136 bits (343), Expect = 1.870e-34 Identity = 83/199 (41.71%), Postives = 119/199 (59.80%), Query Frame = 1 Query: 1 VHAVDAQMGGMRRTIECISITEDDKHAYCGTRTGDVLKFKIDRDDIRYFNDPDTIRPTLAAYSLEKFGKGVRSVCCVRNPETGNTNTLVGGGDGTVGFI-NQSLNKVVGKHCELMGAVTSIAMCPANQGFFVGTSLSNRYWVTMDMET-ELRGTCHFARVNDIIFPADCSDLFVTCSVADIRVWNATLRQELLRIQVSD 591 + A A +G +R I + ++D AYCGT TGD+L+ ++ R + P AA S + F +GV S + + L+G GDGTV + +QS+ + C+++G+VTS+A+ FF GT+LSN YW+ +D T ELR TCH R+N + FPA S++F TCS++DIRVWNAT RQELLRIQV + Sbjct: 53 LRATQANLGQSKRITTNIVVDDNDAFAYCGTTTGDLLQVELTRALFKQ------ACPKGAA-SGKNFSRGVTSSIQLPCGDI-----LLGTGDGTVARVCHQSMR--LKNQCQVLGSVTSLALTADGTHFFCGTALSNIYWIDVDSLTAELRNTCHHERINQVAFPAGYSEVFATCSISDIRVWNATTRQELLRIQVPN 237 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10204.251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10204.251.1 >prot_L-elsbetiae_contig10204.251.1 ID=prot_L-elsbetiae_contig10204.251.1|Name=mRNA_L-elsbetiae_contig10204.251.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=191bp MGGMRRTIECISITEDDKHAYCGTRTGDVLKFKIDRDDIRYFNDPDTIRPback to top mRNA from alignment at L-elsbetiae_contig10204:533..2635- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10204.251.1 ID=mRNA_L-elsbetiae_contig10204.251.1|Name=mRNA_L-elsbetiae_contig10204.251.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2103bp|location=Sequence derived from alignment at L-elsbetiae_contig10204:533..2635- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10204:533..2635- >mRNA_L-elsbetiae_contig10204.251.1 ID=mRNA_L-elsbetiae_contig10204.251.1|Name=mRNA_L-elsbetiae_contig10204.251.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1146bp|location=Sequence derived from alignment at L-elsbetiae_contig10204:533..2635- (Laminarionema elsbetiae ELsaHSoW15)back to top |