mRNA_L-elsbetiae_contig1019.238.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1019.238.1
Unique NamemRNA_L-elsbetiae_contig1019.238.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: D7FKJ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ3_ECTSI)

HSP 1 Score: 425 bits (1092), Expect = 3.840e-139
Identity = 220/272 (80.88%), Postives = 249/272 (91.54%), Query Frame = 1
Query:  181 RRTVVMNG--SLSRQELLKQAGAGLAALMAGAAVGAAPANAQTGTAVEVMRLRFGDKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGSMASTKAIVKLETSSALGMREIKVVPLEYVAKTIEQQGMTN-KNNKRMRSVS 987
            R TVVM+G  S+SR +  KQAG  LAA+  G A GAAPA AQ G+AVEVMRLRFGDKLRRA+KMLDELQ DI+N DWDLV+TYPNAFR+LVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRF+GAVERLKRAAE+QN+REAQ+AFAAMSVAYDRYLKAGNLYDGYD+VTSTEGFYA VSN++LK+VPPSKDPPKI+DNVLL+AGPDKGKTG++IG+EGGS+++TKAIVKLETSSALGMREIKVVPL+YVAKT++QQGM N K  K+MR  S
Sbjct:   77 RTTVVMDGGGSVSRLDFFKQAGLSLAAVAMGGATGAAPAKAQAGSAVEVMRLRFGDKLRRAAKMLDELQDDISNSDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYADVSNSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGVEGGSLSATKAIVKLETSSALGMREIKVVPLDYVAKTVDQQGMFNSKTTKKMRPSS 348          
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: A0A7S3Y3I2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3I2_HETAK)

HSP 1 Score: 246 bits (627), Expect = 3.510e-71
Identity = 142/243 (58.44%), Postives = 172/243 (70.78%), Query Frame = 1
Query:  241 AGLAALMAGAAV-GAAPANAQTGTAVEVMRLRFGDKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEG--GSMASTK--AIVKLETS--SALGMREIKVVPLEYVAKTIEQQG 948
            AG AAL  GA +  A PA A    A E     +GD+LRR ++ LDELQ+DI N+DW+ V+TYP  FR+ VPVFT+YTDA F  +   D  SRVALRYEVGR FGAVERLKRAAE+++ REAQ AFA +SVAYDRYLKAG LYD YD VTSTE F+A V ++ L+F PP+ DPPKI+D VLL AGPDKGKTG +IG+E   GS    K   IVKL+ +      +REIKVVP   VAK ++ +G
Sbjct:   55 AGAAALGLGAGLMDALPAAAAPAPAKEAALKGYGDRLRRIARTLDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRLDTEG 297          
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: A0A0G4GSY0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GSY0_VITBC)

HSP 1 Score: 232 bits (591), Expect = 1.630e-65
Identity = 113/207 (54.59%), Postives = 157/207 (75.85%), Query Frame = 1
Query:  331 RFGDKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGSMASTK--AIVKLETSSALGMREIKVVPLEYVAKTIEQQ 945
            +   ++R+ + +LDELQ DI ++DWD++++YP   R+ VP+FTKYTD+AFP  DPVD  +R ALRYEVGR FG+VERLKRA ++++ RE + AFAAMSV++DRYLKAG+LY+ YD + STE F+ GV ++ L +VPP +DPPKI+D VLLL GPDKGKTG ++G+EG  +A  K   +VKL+T     +RE+KVVP  ++AK   +Q
Sbjct:  107 KIAPRIRQIATVLDELQADIYDEDWDILASYPQQLRAYVPIFTKYTDSAFPGKDPVDENTRFALRYEVGRLFGSVERLKRAVDKKDVRETEEAFAAMSVSFDRYLKAGDLYEVYDPIISTEKFFEGVEDSQLVYVPPLRDPPKIRDQVLLLRGPDKGKTGILLGVEGDEVAKVKRKGVVKLDTKVG-SIRELKVVPYAFIAKRKGEQ 312          
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: A0A7S3Y3T3_HETAK (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3T3_HETAK)

HSP 1 Score: 241 bits (614), Expect = 2.700e-64
Identity = 129/211 (61.14%), Postives = 158/211 (74.88%), Query Frame = 1
Query:  334 FGDKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEG--GSMASTK--AIVKLETS--SALGMREIKVVPLEYVAKTIEQQG 948
            +GD+LRR ++ LDELQ+DI N+DW+ V+TYP  FR+ VPVFT+YTDA F  +   D  SRVALRYEVGR FGAVERLKRAAE+++ REAQ AFA +SVAYDRYLKAG LYD YD VTSTE F+A V ++ L+F PP+ DPPKI+D VLL AGPDKGKTG +IG+E   GS    K   IVKL+ +      +REIKVVP   VAK ++ +G
Sbjct:  596 YGDRLRRIARTLDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRLDTEG 806          
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: A0A7R9UEJ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEJ4_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.800e-60
Identity = 99/166 (59.64%), Postives = 132/166 (79.52%), Query Frame = 1
Query:  331 RFGDKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGME 828
            R G+K+RR +++LD+LQ+DI  +DW  +STYP   RS VP+FTKYTD AFP++  +DT +R ALRYEVGRFFGAVERLKRA + ++  EA+ +FA +S+++DRYLKAGNLY+ YD + STE FY G+ + +L FVPPS + PK +D VLL+AGPDKGKTG +IG+E
Sbjct:   39 RAGEKIRRIARILDDLQRDIFEEDWTFISTYPVELRSFVPIFTKYTDTAFPSESAIDTQTRFALRYEVGRFFGAVERLKRAVDSRDIGEAEASFAQISISFDRYLKAGNLYEQYDPIVSTEKFYEGIPDKDLVFVPPSAETPKTRDPVLLIAGPDKGKTGLLIGIE 204          
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: B8BUB6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUB6_THAPS)

HSP 1 Score: 196 bits (498), Expect = 1.860e-52
Identity = 101/204 (49.51%), Postives = 135/204 (66.18%), Query Frame = 1
Query:  334 FGDKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGSMASTKAIVKLETSSALGMREIKVVPLEYVAKTIEQQ 945
              +K+R  SK++DELQ+D+  + WDLV  YPN  RS VPVFT YTD+AFPTD P D   RVALRYEVGRFF ++ERLK A   ++  EA  A++ MS+ +DRYL+ G LY  YD   S E ++ G   TNL +V P KDP  ++D ++L  GPDKG+TG VIG+      S   +VKL+ +   G+REI+VVP  + AK + +Q
Sbjct:  132 LSNKIRGVSKVMDELQRDLMQERWDLVENYPNQLRSYVPVFTSYTDSAFPTDIPTDQGLRVALRYEVGRFFASLERLKTATSRRSINEAYVAYSDMSLHFDRYLRVGGLYTFYDDTVSLETYFQGTPETNLVYVDPKKDPALVRDLIVLREGPDKGRTGIVIGIY--PDGSNTCVVKLDRTR--GIREIRVVPCMWAAKRLGEQ 331          
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: B7FPD1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPD1_PHATC)

HSP 1 Score: 191 bits (485), Expect = 6.470e-51
Identity = 104/223 (46.64%), Postives = 146/223 (65.47%), Query Frame = 1
Query:  286 PANAQTGTAVEVMRLRFG---DKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGSMASTKAIVKLETSSALGMREIKVVPLEYVAKTIEQQ 945
            P  ++T TA   +  R G    K+R    ++DELQ+D+  + WDLV +YP   RS VPVFT YTD+AFP+D P D   RVALRYEVGRFF +VER K+AA  Q   EA  A++ M++ +DRYL+ G LY  YD   STE ++ G+++  L +  P  DPP ++D V+L+ GP+KGKTG +IGM   S  + K+++KL+     GMREI+VV  ++VAK + +Q
Sbjct:   91 PDLSKTMTAQGPVNRRVGGLASKIRNIGSVMDELQRDLMQERWDLVESYPAQLRSFVPVFTTYTDSAFPSDAPTDKGLRVALRYEVGRFFASVERFKQAASRQALDEAYLAYSEMALHFDRYLRVGGLYTYYDDSISTEPYFQGIADDALVYSDPKTDPPFVRDLVILVRGPEKGKTGIIIGMY--SDGTNKSVIKLDRYK--GMREIRVVANDWVAKRLGEQ 309          
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: A0A7S3L2H9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L2H9_9STRA)

HSP 1 Score: 189 bits (479), Expect = 8.340e-51
Identity = 100/201 (49.75%), Postives = 131/201 (65.17%), Query Frame = 1
Query:  343 KLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGSMASTKAIVKLETSSALGMREIKVVPLEYVAKTIEQQ 945
            K+R    ++DELQ+D+  + WDLV  YP   RS VPVFT YTD AFP+D P D   RVALRYEVGR F +VER   A+  Q+  EA  A+A M++ +DRYL+ G LY  YD   S E ++ GVS+T L F  P KDPP ++D ++L++GPDKGKTG V+        S K +VKL+     GMREI+VVP  +VAK + +Q
Sbjct:   54 KIRTVGNIMDELQRDLMQERWDLVGGYPAQLRSYVPVFTTYTDTAFPSDAPTDKGLRVALRYEVGRLFASVERFNLASSRQSLDEAYLAYADMALHFDRYLRVGGLYSYYDDTISNEPYFKGVSDTALVFADPIKDPPLVRDLIVLVSGPDKGKTGIVLAQY--RDGSNKTVVKLDRFK--GMREIEVVPNAWVAKRLGEQ 250          
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: A0A7S2IJZ6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IJZ6_9STRA)

HSP 1 Score: 189 bits (481), Expect = 2.130e-50
Identity = 98/202 (48.51%), Postives = 136/202 (67.33%), Query Frame = 1
Query:  340 DKLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGSMASTKAIVKLETSSALGMREIKVVPLEYVAKTIEQQ 945
            +K+R  ++++DELQ+D+  + WDLV  YP   RS VPVFT YTD+AFP+D+P D   RVALRYEVGRFF ++ERL++A   ++  EA TAFA MS+ +DRYL+ G LY  YD+  +TE  +  +S+  L F  P KDPP ++D ++L  GPDKGKTG VIG+      +   +VKL+      MREI+VVPL +  K + +Q
Sbjct:  109 NKIRGVARVMDELQRDLMQERWDLVEKYPPQIRSYVPVFTTYTDSAFPSDEPTDQGLRVALRYEVGRFFASLERLRQATSRRSLDEAYTAFADMSLHFDRYLRVGGLYTYYDSTITTEPLFKNISDDALVFSDPKKDPPAVRDLIVLTKGPDKGKTGIVIGIYPDGKGT--CVVKLDRYK--DMREIRVVPLLWAGKRLGEQ 306          
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Match: A0A7S4RLA6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RLA6_9STRA)

HSP 1 Score: 188 bits (478), Expect = 5.400e-50
Identity = 97/201 (48.26%), Postives = 136/201 (67.66%), Query Frame = 1
Query:  343 KLRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYLKAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPDKGKTGYVIGMEGGSMASTKAIVKLETSSALGMREIKVVPLEYVAKTIEQQ 945
            K+R    ++DELQ+D+  + WDLV  YP  FRS VPVFT YTD+AFP+D+P D   RVALRYEVGRFF ++ERL++A   ++  EA TA+A MS+ +DRYL+ G LY  YD++ STE  +  + +  L F  P KDPP+++D V++  GPDKGK G VIG+      +   +VKL+     G+REI+V+PL +V K + +Q
Sbjct:  109 KIRGVVGIMDELQRDLMQERWDLVEKYPGQFRSYVPVFTTYTDSAFPSDEPTDQGLRVALRYEVGRFFASLERLRQATTRRSLNEAYTAYADMSLHFDRYLRVGGLYTYYDSLISTEPLFTNIPDNALIFSDPKKDPPEVRDLVVVTKGPDKGKIGIVIGIYPDGKGN--CVVKLDRYK--GLREIRVLPLLWVGKRLGEQ 305          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1019.238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKJ3_ECTSI3.840e-13980.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3Y3I2_HETAK3.510e-7158.44Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4GSY0_VITBC1.630e-6554.59Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S3Y3T3_HETAK2.700e-6461.14Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
A0A7R9UEJ4_9STRA1.800e-6059.64Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
B8BUB6_THAPS1.860e-5249.51Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
B7FPD1_PHATC6.470e-5146.64Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3L2H9_9STRA8.340e-5149.75Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2IJZ6_9STRA2.130e-5048.51Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4RLA6_9STRA5.400e-5048.26Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1019contigL-elsbetiae_contig1019:20423..27968 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score425.6
Seed ortholog evalue1.7e-116
Seed eggNOG ortholog2880.D7FKJ3
Hectar predicted targeting categorysignal peptide
EggNOG OGs2BGND@1,2S19T@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_001860.1
Exons7
Model size2503
Cds size795
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815249.6087844-UTR-L-elsbetiae_contig1019:20422..206171622815249.6087844-UTR-L-elsbetiae_contig1019:20422..20617Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1019 20423..20617 +
1691682795.4038928-UTR-L-elsbetiae_contig1019:20422..206171691682795.4038928-UTR-L-elsbetiae_contig1019:20422..20617Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1019 20423..20617 +
1622815249.7083578-UTR-L-elsbetiae_contig1019:26455..279681622815249.7083578-UTR-L-elsbetiae_contig1019:26455..27968Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1019 26456..27968 +
1691682795.5200949-UTR-L-elsbetiae_contig1019:26455..279681691682795.5200949-UTR-L-elsbetiae_contig1019:26455..27968Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1019 26456..27968 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815249.625707-CDS-L-elsbetiae_contig1019:20617..206531622815249.625707-CDS-L-elsbetiae_contig1019:20617..20653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 20618..20653 +
1691682795.4163446-CDS-L-elsbetiae_contig1019:20617..206531691682795.4163446-CDS-L-elsbetiae_contig1019:20617..20653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 20618..20653 +
1622815249.637637-CDS-L-elsbetiae_contig1019:21278..214461622815249.637637-CDS-L-elsbetiae_contig1019:21278..21446Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 21279..21446 +
1691682795.4253912-CDS-L-elsbetiae_contig1019:21278..214461691682795.4253912-CDS-L-elsbetiae_contig1019:21278..21446Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 21279..21446 +
1622815249.6498656-CDS-L-elsbetiae_contig1019:22471..225961622815249.6498656-CDS-L-elsbetiae_contig1019:22471..22596Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 22472..22596 +
1691682795.4378831-CDS-L-elsbetiae_contig1019:22471..225961691682795.4378831-CDS-L-elsbetiae_contig1019:22471..22596Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 22472..22596 +
1622815249.661292-CDS-L-elsbetiae_contig1019:24283..244071622815249.661292-CDS-L-elsbetiae_contig1019:24283..24407Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 24284..24407 +
1691682795.4504323-CDS-L-elsbetiae_contig1019:24283..244071691682795.4504323-CDS-L-elsbetiae_contig1019:24283..24407Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 24284..24407 +
1622815249.6741416-CDS-L-elsbetiae_contig1019:25010..251331622815249.6741416-CDS-L-elsbetiae_contig1019:25010..25133Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 25011..25133 +
1691682795.4621398-CDS-L-elsbetiae_contig1019:25010..251331691682795.4621398-CDS-L-elsbetiae_contig1019:25010..25133Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 25011..25133 +
1622815249.6853049-CDS-L-elsbetiae_contig1019:25663..257951622815249.6853049-CDS-L-elsbetiae_contig1019:25663..25795Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 25664..25795 +
1691682795.4732993-CDS-L-elsbetiae_contig1019:25663..257951691682795.4732993-CDS-L-elsbetiae_contig1019:25663..25795Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 25664..25795 +
1622815249.6958323-CDS-L-elsbetiae_contig1019:26368..264551622815249.6958323-CDS-L-elsbetiae_contig1019:26368..26455Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 26369..26455 +
1691682795.4903746-CDS-L-elsbetiae_contig1019:26368..264551691682795.4903746-CDS-L-elsbetiae_contig1019:26368..26455Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1019 26369..26455 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1019.238.1prot_L-elsbetiae_contig1019.238.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1019 20618..26455 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1019.238.1

>prot_L-elsbetiae_contig1019.238.1 ID=prot_L-elsbetiae_contig1019.238.1|Name=mRNA_L-elsbetiae_contig1019.238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=265bp
MNGSLSRQELLKQAGAGLAALMAGAAVGAAPANAQTGTAVEVMRLRFGDK
LRRASKMLDELQQDIANDDWDLVSTYPNAFRSLVPVFTKYTDAAFPTDDP
VDTTSRVALRYEVGRFFGAVERLKRAAEEQNNREAQTAFAAMSVAYDRYL
KAGNLYDGYDTVTSTEGFYAGVSNTNLKFVPPSKDPPKIQDNVLLLAGPD
KGKTGYVIGMEGGSMASTKAIVKLETSSALGMREIKVVPLEYVAKTIEQQ
GMTNKNNKRMRSVS*
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mRNA from alignment at L-elsbetiae_contig1019:20423..27968+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1019.238.1 ID=mRNA_L-elsbetiae_contig1019.238.1|Name=mRNA_L-elsbetiae_contig1019.238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7546bp|location=Sequence derived from alignment at L-elsbetiae_contig1019:20423..27968+ (Laminarionema elsbetiae ELsaHSoW15)
TCAGGATGCTTGTCGGGCGCCACGGCCTTCCGGGCATCGGTGTTCCAAGG CGCCCCTCTCCAGAGAGCGGCGGCAACACCAGCAGGAGCGGGGACGAGCG CCGCAACAACGGGCGCGTCGGCCCGAGGGTCGCCTGCGGCGGGGTCGGGG TGTGGTGGCGGGGGCGCGGGCGGGGGCGGCAGACGAACGGTCGTCATGAA CGGCAGCTTGTCTCGGCAGGAGCTGTTGAAGGTGCTGCAAGAATGGCGTG CGTGTGCCCCGTGGAAGCTTTAGCTTTGCGCTCGCCCGCCCGGGGGCGTT TTTTTTCTTCTTTTTTTTTTCTTTTTTTTCTTTTTCTCCGTATTTATTTC CAGTGCTCGATGGGCTCCTTGCCACGAGGACGTCTTACCAGAGTACTGAA CCGTGGTTGTACAGAAGGGATCCTTTCCCCGAGGCCCCCACTCCCCCCCG TCTGCGGTGCTTGCCTAAGGTTTTTGTCGCGGGGAAGGGCCCAGCCGTCC CTTTCCCTCGTCGACGGCGAGGTCGAAGTTTGGAGTGGGGGGGAAAGTGG GCGCCCGTTTTCTTGCGCCCGGGGTCCGCTCTCGGCCGCAGAGAAACAGC GGAGCTTCTCCCAGGTTCAATCTTGACGAGGGTAGCCCTTGGAGACGCGC TCGTCGCTTTCAAGGTTGCGATCTCGCACAGACTCATAGAGCTCTACACT AGCTAGGGTTGGCAGCGGTGTGGTACACTACTGTTCTTGTGTTTTTACTT ACATTTGCTTTAGTCATACACAGCGCCTGTTCTCCCCTCTCCCTGTCGTT CTTAACCCCGGCTGTTTGTATCTCCCTCTCGTCTCGCCATTCTCCGTTTG CCGCAGCAAGCCGGAGCGGGCCTGGCCGCCTTGATGGCGGGGGCGGCGGT GGGGGCGGCCCCCGCCAACGCACAGACGGGGACGGCGGTGGAGGTGATGC GGCTGCGGTTCGGCGACAAGCTTCGAAGGGCGTCCAAGATGCTGGATGAG CTCCAGCAGGACATTGCGAATGATGTGAGGGTGGCCGACCAGAGGTCCCA GAGAGCGAGTGAGCCTTATTTATGTAGGCAATAAAAGCGTCGAGGGAGAA AAAATCGAACTGCCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTATTAGC ATTCTGAACTTAACAGGCGTTTTGAGCGGTGTTCGTGTGCTCTGCCCCCC TTTTTTCTTTCTTTTCTTTGTTNNNNNNNNNNGGAGAGGGGGGGGGATGA CAGCGAGGAAAAAAAGGGGGGGGGGGAGAGAGAGGCGAACGGCCGCCTTT TTTTTTTTTTTTTTTCATCTGCTGAGCGGCATGCTGAACTGAACAGGCGT GCTGAGCGGCGTGCGTGTGCGCTGCACCCGTTTCTTCTTCCTTTTCTGTG TTGGTGCGTACGTGGGCTGCAAATCTTTTCCATCCATGTTGATCAACGCG CAAGCCGGCCTGGTCTGTGCACGAGACGAAAAAAAGTTTCACCGTGTGGA GCTTTGTTTCTTTTCTGCATCAGGAAAATGCGGAACGACCAAGTGGATTA TTTAGCCGCAATTAAATGCCCTGCCGAGCTGCCCTGGTTTCCACCGACGT CCAGCGCGCGGTGCTCAAGCGATGCATGCAAATTTCTTGTTATTTTTTTA TATCTCTCCGCCTTGATCCAGGTGCACGCTGCAAAAGTGTGCACGTGGGG CTACTTCCGCCGTTCTTGACCCGCGAGATGATACATACATACACGAAACG GCGGCCGTTTCGGGGTTTGGTAACTTGTACCGTAGTAATGCGTTCGCAAG GGGGCCCCTGGGGGGGGGGCGTGTGTACGCGTGTGTACCGCGGACGAACG CCGTGGTCGGAAAGAGCGGAAAGAAGAGAAATAAGCGAAACTCGACCCAC CCTCAACAAACATATTTTTTCAAGAAGAAACGAAACGAAACTCTCTCTAC CCACGCTAAAAAAAAACATAGAAGTATATTTTATATTTTTTGGCTCTTGG GTGCTTGCTGTGCTGGTGTGGTCTCCTCTGGCGGCGCGGCTTATTGCAGG ACTGGGACCTGGTGTCGACCTACCCGAACGCGTTCCGCTCTCTGGTGCCA GTCTTCACCAAGTACACGGACGCGGCCTTCCCTACGGACGACCCGGTGGA CACCACGTCGAGGGTGGCGCTGAGGTGAGACAGGCGGGAATGCGGTGCGG GAGAAAGAAGGGACGGACGTCTCGGTGAATAACAGTCAAGAGCGAACCTC TGTCTTTTTCGCTAAATAAATAACAAAAATAAAACAAAATAATAGGTTTC ATTTTTTTTAGTTTTCCCACCGCGCTGTGAGCGGTGCCTCTGTTGCGCTC CCGGTCGCGACCGCCGCCAACAGCACGCGATAATGGACCGCGTCGTGTGC CTTGGACTGCTCCTGTTAGCTCAGCAGAGCATGATATTACGGTTTTTGCT GTTCTATTTATTTACCGGTTGTGCGCGTGAGCCCGCCCACCGCCCACTCT CTTTCGTTTGCAACCGCCTCGGACCGGTTCGGTTTAGTCACCGGTAAAGT CGGGGCCGGACATGACCCCGGTTGGGTCGTCTAGCTAGTCGTAGTGGAGT ATGGGGGCCAGTGGGGCAGACGACGAATATGCCAATAATGGGAGGGAAAA AAAGAAGAAAAAAAATGTATATATATAGAGATACATATACAATTGGTGTC TGGGAACTTATGTTCCGAAATCTGTCAGTAGGCTATCGGCCTCCAATAGC CTCAAAAAACGTCAGATGACAGCAGTTGTTTCGAGCATGGCAGCACATGC CAGGAGACTGGACATCTATTGTACCTGACGAGCACAGATCGGCACAGCTC TGTTTGGTTTAAGGGAGCGGCAGCACAGAAAAGCCCAAACAAACGTCAAG ATGACAGCAGCTGTGTCTTTCAGTTGAACAAAAATACGTCAGCAGCAGCG TCTTTTTTCGGTAGAACGAAAAGCACACTGCTGAGGGGCACAGACCTGCA CAGCTGTGTTGACAAGGGCGGGGCGTCCGCACAGAAGCACCCGGTTCAGT GCTGTTGCTGTGTTTTTGAAGGGAGCTGTTTCTGATCTACAACAAAACGT GACGATTACCAGAGCTGTTTTTTGCGGGAAAAGAGGCGTTTGAGTTCAAA ATCTTTGGTTCAAAGATCTAGCGCCGCGCGCTCCCCACCTCTCCCCACAA CCCTCGTAAGTCGTTGGTGATCGAGAAACCATATACACACCGAAAAGCTT CGAGCATGGCCCGCACGCCCCGCACCGAAAAAAACAAAAAAAACAGCTAC ATATGTACTGTGTTTTTTCAACCTCGACGCAGCAGCTGCTGTGCATACTG AAACAAACAGCTGCTTCTTTCCTGTGCTGACGCTCCCTTGAACCAAAGCT GTGCCGGTCTGTGCTCATCAGGTACAATAGCTGTCCAGTCTCCTGGCATG TGCTGCCATGCTCAAAACAGCTGCTGTCATACCGACGTTTTTTTCGGCTA TTTGGAAGCCGATAGCCCACTAGATTCAGAATCGGAACGGTAGTTCCCAG ACTCCACTCAGCTGCTGTTTTGTTGTTTTTTTCAGTTATAAATTTAGGGA GTACTTCTGCAGCCTTCGTCTGTTTGCTTTCGTCTTGCATCACCCCCTGC CGCTGTGCTCTCATGAGCCCGCTCCGAAGGGGGATCTTGTATATATACAT ATATATGACACTCCCGTTATATTTTTTTCAATTTATGTACACACATGTCA GCGGTCTACGCCCAGTCTGTAAAAAAGTCGTTTCAGAGGGGCTACTGTTG TAGGCGTACTAACCCCCTCTTTGTCGCTTTTTCACTTCACTTCACTGCGC AACTGCGGCAGGTACGAGGTTGGAAGGTTCTTCGGCGCGGTGGAACGCCT GAAACGCGCGGCGGAGGAGCAAAACAACCGCGAGGCACAGACCGCTTTCG CGGCCATGTCGGTGGCGTACGACCGATACCTCAAGGTGAGCGCATCACAC AACACCGGCTCGACGAGTCAGCGCTTTTTTTTTTTGTATTATTTGTCTAC GATACGCTGCTACAATCGCGACGCTACATATGAACCAGTTCCTTCCCGTA GGAGAGGCGGATCGAGCTGCATGGCGGAAGCGTACCGAGAGTCATGTCGC CCTTCCAGTCACGCGCTTGTTCCGATCCGAACCTCGGGAGCGTGTTTTAT TGTCCAGTCCAAGAATTATTTTTTTTTCTGTTATTTTCTTCTTGGCATTT ATTTCCAGTGCTCGATGGGCTCTCTTGTCACGAGGATATATTTTGCCAGA GTACTGAACCGTAGTCACGCAGAGGGATTCCTTTCCCCAAGGCCCCCACT ACCCCCGTCTGCGGTGCTTGCCTACTATTTTTATCGCGAGAAGGGCTCAG CCGTCCCTTTCCCTCGTCGACGGTGAGGTCGAAGAATGTGTATGTGATGC TCGTTAAATAGTGGTGGTCTGTAAAGGAGCATACCCCTTGGTCTTCGGCG TGAGTGTACGTAAGTTTGTTTCCTCGCCGAATCAATGTTCGTCGTCGGAT GTGCGCCTTTTTGGTTTTGTTTTCGCAAACGTGTTCAGGCCGGTAACCTG TATGACGGGTACGACACCGTGACGTCCACCGAGGGCTTCTACGCCGGTGT CTCCAACACCAACCTCAAGTTCGTGCCTCCCAGCAAGGACCCTCCCAAGA TTCAGGACAACGTGAGTGAGCCCACGCCCCCCCCCGGGGGGGGTGTTCTC TGGGGCCCCTCAATAGTGTACTAAAATAGGCTCGCGGGACGTCGGTTCGC TTTTGCCGACCGACATCGGGCTCCTTAACGCAAAAAATCGCCGCTGTGTG CGCGGGGCTTGCTACTGCTCTTGGCGAGGCCGTGCTGCTTTTTTTACCTT GGAGGATATTTTATTCTGCCTCTTGGGAGAGGGGGGGGATCGATCCGATG CAAAATAGTCTATGTAGACGTGCAGTTTGGTGTCTTGTGTCTTGCTGGGG AAGTATGGCGTTTCAACAAATGCAACCGGATATCCAAGGTGCTCATGGCG TATTTGAACGCTCTCGCCCGCCCCTACCAAAACATAAATATACTCCAACT CTGCAGTTGCAGCGCGCGACGCGCGAGGAAGAAACCCCCGTGAGGCCGAT GCTGTGCCAAGACGAATACATCTCTTGCGCATGGTTAAATATTTCGCGGT TCGAAACATCCTTCCTCCCGCCCTCCTCGCGGCCTTTCCAGGTGCTCCTG CTGGCGGGGCCCGACAAGGGCAAAACCGGGTACGTGATCGGAATGGAAGG CGGGAGCATGGCGTCGACGAAAGCGATCGTCAAGCTAGAGACGAGCTCTG CCCTCGGCATGCGCGAGATCAAGGTGCGAAAGTAAAGAAGGAAGAGGGCA GGAAAGGAACCAAGGAGGGGAGGAAATTGGCGTTTTTGTGCGAGGATGGT TGTGCCAGTGCCCGTGTGCGTCTGTCTCGCTCTGTGTGCTAAACACTAGC CACACGGGAGAGACAAGAGAGAGAGAGAGAGAGAGAGAGAGATAAGTAGA GCATCTGTACTTGTGTTCCACCCTACTTACGGTTGTGGACCGAGTTTGTT TGCTTCTTTGATGCGTTTATTGTTGCATGTTTTTGCGTTTTGAGGAGGCG TCTTTTCGACCCAGCCGCTGTAGGTGTGCGAGGAAGCTCGGTACATGCGT TGCTATGCGCTTCTGTTGTGCCGCAAGCTTGACAATCTGCCGCTGCGGCA GGCAGGAGGGGTTCTTGGCGGCTGGAGTTTGCAGCAGAACACTGAGGAGC TACATTTTCTCCTAAAATGCTTAAAGTAGCGATCGAGCCGGCTCAATGCC AACTTCTTGTGTGCTTAAAAAAAAAAAAACGCCCCCCCCCCCACCCCTCC CTCCCCTCCCTCCCGTCACCCCCTGCATGGTTCTATTCGCATCAAGGTTG TGCCCCTCGAATATGTAGCCAAGACGATCGAGCAGCAAGGCATGACAAAC AAGAACAACAAGAGGATGAGATCCGTGTCTTAAATATACTTGCGAGGACA CCGATATGGGCGACGTCGCGGCGACTCTGCGCCTTGACGGAAGTGCTATA ACTCTCGGTGTGTTGGCATGTGCGCACAGGATGCTGCTCACTTGCCACGA AATGTGCTAGGGCTTTGGGTGATGAAACCTTCCTAAGCGACGGCCTTGGT TCTTTATGTGGGCCTCCGTAACCGTGGTCGCCCGCCGATTTTGTGGTCAA CCACGAAACATGACTTCGCTATTTCGACAAATTGCCGTGGGTGCATGCAG CTCATCCGAGCCTTTTGGCGAGGTTTAAAAATCTACGGCGCTTGTGTGCT GCGCGTTGTATCAGGTAGCTTTGAACGGTGCTTGCCGTGTAGTCGTGTAG TGTCCAGGATACGCATACGCGAGTTCGGGTTCGGATCAACTTGGAATCAA TGGCGATTATTTTCCGAGTAGAAACATACCTGGGATAGCTCAGACTCTTC TGCAAGAGGGTTGGGAGGCGGCCCACGCGGCGCGAGAGACAGAGGACACG AAGCAATTTGTCGGGTTGATGCGCGATGTGCCTGGCGATAAGACTGTTTT TGTTCGGAGGCTACATACATAATATGTGTGCGGCGGTGTAGACTTTTTGT TACCATGTTGGTGTATGCAGCAATGTATCCTGACCTTCCCCTGCGATCCG TTCGAACTGTATGTTTCCCTACACAAGTTCTCGACCCGTTGGAATAGTCT ACCTCCCGCCGTGCATAGTGACGTTGTGCCGCCATGACGTGCCTGTGTTG CGCATTTTGTGTCAGGTAAATCTAGAGTGCATACGTAGTATTGTATCTGA CGCCTTGGGCTGTAAGTTAGATCGCATTTGCTTACAGATAAAACAAGAGT TTAGAGAGGCCTTGCTTCATTTTGTTGTGTTGTGGCCTGTGTGAGGTCGT GGCTGATCAGAGGCTGTTTTTTGTTTCGGGTTTCCCTGATCACCTCGCGA ATCTTACTGCCCCAACCGAGCAGAGCAGGATGTCAAGAGAATATCTGCAC GCACGATACGAATTGGGCCAGAGGCGTGTGCTTTGATTGGACTCTCTCCT CCGGCTTTGGTCGGAATAGTAGCGTTTCCGTCAAAGTCAACATGGGGGAA CACCTTCGATATCATGGCTTCGTTCGTCCCACGGGGAAGTTCGAAACCCT TACTTTACATGGGTTTACTCGAGATGGAGCTACAATGTAGATGGATGCGG TGTTTGACCAATGCCACGATAGAGGGGGTACCCCTAATTGAAAGCTTGTC GGCCGACAAGCGTAGAGTCCTATACAGTCTAGGGAGTAAAAATTGCCCCC CACGATTGTTTTGGGTTTACCAAAGAGTTGGAAGCTAATTGACGAGGAGT AGCACTTGCGTAGCACTTTTCAAATCTGGCAAAGGAGCCCCGTGTATCGA TATAAGGGTACCCCCCTGCAAGGCTTGTCGGCCGACAAGCTCCGTGATCT TGCAACCTGACGGCCAAAAAGTACCCCCTCTATCGTGGCATTGGTC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1019:20423..27968+

>mRNA_L-elsbetiae_contig1019.238.1 ID=mRNA_L-elsbetiae_contig1019.238.1|Name=mRNA_L-elsbetiae_contig1019.238.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1590bp|location=Sequence derived from alignment at L-elsbetiae_contig1019:20423..27968+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAACGGCAGCTTGTCTCGGCAGGAGCTGTTGAAGATGAACGGCAGCTT
GTCTCGGCAGGAGCTGTTGAAGCAAGCCGGAGCGGGCCTGGCCGCCTTGA
TGGCGGGGGCGGCGGTGGGGGCGGCCCCCGCCAACGCACAGACGGGGACG
GCGGTGGAGGTGATGCGGCTGCGGTTCGGCGACAAGCTTCGAAGGGCGTC
CAAGATGCTGGATGAGCTCCAGCAGGACATTGCGAATGATCAAGCCGGAG
CGGGCCTGGCCGCCTTGATGGCGGGGGCGGCGGTGGGGGCGGCCCCCGCC
AACGCACAGACGGGGACGGCGGTGGAGGTGATGCGGCTGCGGTTCGGCGA
CAAGCTTCGAAGGGCGTCCAAGATGCTGGATGAGCTCCAGCAGGACATTG
CGAATGATGACTGGGACCTGGTGTCGACCTACCCGAACGCGTTCCGCTCT
CTGGTGCCAGTCTTCACCAAGTACACGGACGCGGCCTTCCCTACGGACGA
CCCGGTGGACACCACGTCGAGGGTGGCGCTGAGGACTGGGACCTGGTGTC
GACCTACCCGAACGCGTTCCGCTCTCTGGTGCCAGTCTTCACCAAGTACA
CGGACGCGGCCTTCCCTACGGACGACCCGGTGGACACCACGTCGAGGGTG
GCGCTGAGGTACGAGGTTGGAAGGTTCTTCGGCGCGGTGGAACGCCTGAA
ACGCGCGGCGGAGGAGCAAAACAACCGCGAGGCACAGACCGCTTTCGCGG
CCATGTCGGTGGCGTACGACCGATACCTCAAGGTACGAGGTTGGAAGGTT
CTTCGGCGCGGTGGAACGCCTGAAACGCGCGGCGGAGGAGCAAAACAACC
GCGAGGCACAGACCGCTTTCGCGGCCATGTCGGTGGCGTACGACCGATAC
CTCAAGGCCGGTAACCTGTATGACGGGTACGACACCGTGACGTCCACCGA
GGGCTTCTACGCCGGTGTCTCCAACACCAACCTCAAGTTCGTGCCTCCCA
GCAAGGACCCTCCCAAGATTCAGGACAACGCCGGTAACCTGTATGACGGG
TACGACACCGTGACGTCCACCGAGGGCTTCTACGCCGGTGTCTCCAACAC
CAACCTCAAGTTCGTGCCTCCCAGCAAGGACCCTCCCAAGATTCAGGACA
ACGTGCTCCTGCTGGCGGGGCCCGACAAGGGCAAAACCGGGTACGTGATC
GGAATGGAAGGCGGGAGCATGGCGTCGACGAAAGCGATCGTCAAGCTAGA
GACGAGCTCTGCCCTCGGCATGCGCGAGATCAAGGTGCTCCTGCTGGCGG
GGCCCGACAAGGGCAAAACCGGGTACGTGATCGGAATGGAAGGCGGGAGC
ATGGCGTCGACGAAAGCGATCGTCAAGCTAGAGACGAGCTCTGCCCTCGG
CATGCGCGAGATCAAGGTTGTGCCCCTCGAATATGTAGCCAAGACGATCG
AGCAGCAAGGCATGACAAACAAGAACAACAAGAGGATGAGATCCGTGTCT
TAAGTTGTGCCCCTCGAATATGTAGCCAAGACGATCGAGCAGCAAGGCAT
GACAAACAAGAACAACAAGAGGATGAGATCCGTGTCTTAA
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